/* @include ajurldata ********************************************************* ** ** AJAX url data structures ** ** @author Copyright (C) 2010 Peter Rice ** @version $Revision: 1.7 $ ** @modified Oct 5 pmr First version ** @modified $Date: 2012/04/26 17:36:15 $ by $Author: mks $ ** @@ ** ** This library is free software; you can redistribute it and/or ** modify it under the terms of the GNU Lesser General Public ** License as published by the Free Software Foundation; either ** version 2.1 of the License, or (at your option) any later version. ** ** This library is distributed in the hope that it will be useful, ** but WITHOUT ANY WARRANTY; without even the implied warranty of ** MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU ** Lesser General Public License for more details. ** ** You should have received a copy of the GNU Lesser General Public ** License along with this library; if not, write to the Free Software ** Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, ** MA 02110-1301, USA. ** ******************************************************************************/ #ifndef AJURLDATA_H #define AJURLDATA_H /* ========================================================================= */ /* ============================= include files ============================= */ /* ========================================================================= */ #include "ajdefine.h" #include "ajtextdata.h" #include "ajresourcedata.h" AJ_BEGIN_DECLS /* ========================================================================= */ /* =============================== constants =============================== */ /* ========================================================================= */ /* ========================================================================= */ /* ============================== public data ============================== */ /* ========================================================================= */ /* @data AjPUrl *************************************************************** ** ** Ajax url object. ** ** Holds the url itself, plus associated information. ** ** @alias AjSUrl ** @alias AjOUrl ** ** @attr Id [AjPStr] Id of term ** @attr Db [AjPStr] Database name from input ** @attr Setdb [AjPStr] Database name from command line ** @attr Full [AjPStr] Full name ** @attr Qry [AjPStr] Query for re-reading ** @attr Formatstr [AjPStr] Input format name ** @attr Filename [AjPStr] Original filename ** @attr Lines [AjPStr*] Full text ** @attr Resqry [AjPResquery] Resource query ** @attr Fpos [ajlong] File position ** @attr Format [AjEnum] Input format enum ** @attr Count [ajuint] Number of lines read ** @@ ******************************************************************************/ typedef struct AjSUrl { AjPStr Id; AjPStr Db; AjPStr Setdb; AjPStr Full; AjPStr Qry; AjPStr Formatstr; AjPStr Filename; AjPStr *Lines; AjPResquery Resqry; ajlong Fpos; AjEnum Format; ajuint Count; } AjOUrl; #define AjPUrl AjOUrl* /* @data AjPUrlin ************************************************************* ** ** Ajax url input object. ** ** Holds the input specification and information needed to read ** the url and possible further entries ** ** @alias AjSUrlin ** @alias AjOUrlin ** ** @attr Input [AjPTextin] General text input object ** @attr Resource [AjPResource] Resource object ** @attr UrlList [AjPList] Result URLs list ** @attr QryList [AjPList] Resource query objects for result URLs list ** @attr UrlData [void*] Format data for reuse, e.g. multiple term input ** (unused in current code) ** @attr Identifiers [AjPStr] Identifiers of source entry ** @attr Accession [AjPStr] Accession number of source entry ** @attr IdTypes [AjPStr] Identifier types in DRCAT ** @attr IsSwiss [AjBool] True if URL is from a SwissProt reference ** @attr IsEmbl [AjBool] True if URL is from an Embl/GenBank/DDBJ reference ** @@ ******************************************************************************/ typedef struct AjSUrlin { AjPTextin Input; AjPResource Resource; AjPList UrlList; AjPList QryList; void *UrlData; AjPStr Identifiers; AjPStr Accession; AjPStr IdTypes; AjBool IsSwiss; AjBool IsEmbl; } AjOUrlin; #define AjPUrlin AjOUrlin* /* @data AjPUrlall ************************************************************ ** ** Ajax URL all (stream) object. ** ** Inherits an AjPUrl but allows more URLs to be read from the ** same input by also inheriting the AjPUrlin input object. ** ** @alias AjSUrlall ** @alias AjOUrlall ** ** @attr Url [AjPUrl] Current URL ** @attr Urlin [AjPUrlin] URL input for reading next ** @attr Totterms [ajulong] Count of terms so far ** @attr Count [ajuint] Count of terms so far ** @attr Multi [AjBool] True if multiple values are expected ** @attr Returned [AjBool] if true: URL object has been returned to a new ** owner and is not to be deleted by the destructor ** @attr Padding [char[4]] Padding to alignment boundary ** @@ ******************************************************************************/ typedef struct AjSUrlall { AjPUrl Url; AjPUrlin Urlin; ajulong Totterms; ajuint Count; AjBool Multi; AjBool Returned; char Padding[4]; } AjOUrlall; #define AjPUrlall AjOUrlall* /* @data AjPUrlAccess ********************************************************* ** ** Ajax url access database reading object. ** ** Holds information needed to read an url entry from a database. ** Access methods are defined for each known database type. ** ** Url entries are read from the database using the defined ** database access function, which is usually a static function ** within ajurldb.c ** ** This should be a static data object but is needed for the definition ** of AjPUrlin. ** ** @alias AjSUrlAccess ** @alias AjOUrlAccess ** ** @attr Name [const char*] Access method name used in emboss.default ** @attr Access [AjBool function] Access function ** @attr AccessFree [AjBool function] Access cleanup function ** @attr Qlink [const char*] Supported query link operators ** @attr Desc [const char*] Description ** @attr Alias [AjBool] Alias for another name ** @attr Entry [AjBool] Supports retrieval of single entries ** @attr Query [AjBool] Supports retrieval of selected entries ** @attr All [AjBool] Supports retrieval of all entries ** @attr Chunked [AjBool] Supports retrieval of entries in chunks ** @attr Padding [AjBool] Padding to alignment boundary ** @@ ******************************************************************************/ typedef struct AjSUrlAccess { const char *Name; AjBool (*Access)(AjPUrlin urlin); AjBool (*AccessFree)(void* qry); const char* Qlink; const char* Desc; AjBool Alias; AjBool Entry; AjBool Query; AjBool All; AjBool Chunked; AjBool Padding; } AjOUrlAccess; #define AjPUrlAccess AjOUrlAccess* /* ========================================================================= */ /* =========================== public functions ============================ */ /* ========================================================================= */ /* ** Prototype definitions */ /* ** End of prototype definitions */ AJ_END_DECLS #endif /* !AJURLDATA_H */