Access the ArrayExpress Microarray Database at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

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Documentation for package ‘ArrayExpress’ version 1.30.1

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ae2bioc Convert MAGE-TAB files from raw data into a Bioconductor object
ArrayExpress R objects from ArrayExpress database
extract.zip Unzip archives in a specified directory
getAE Download MAGE-TAB files from ArrayExpress in a specified directory
getcolproc Return the possible column names from processed MAGE-TAB files
getcolraw Return the possible column names from raw MAGE-TAB files
procset Convert processed MAGE-TAB files into a Bioconductor object
queryAE XML query of the ArrayExpress repository