Package: BSgenome.Cfamiliaris.UCSC.canFam3.masked
Title: Full masked genome sequences for Canis lupus familiaris (UCSC
        version canFam3)
Description: Full genome sequences for Canis lupus familiaris (Dog) as provided by UCSC (canFam3, Sep. 2011) and stored in Biostrings objects. The sequences are the same as in BSgenome.Cfamiliaris.UCSC.canFam3, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.
Version: 1.3.99
Author: The Bioconductor Dev Team
Maintainer: Bioconductor Package Maintainer
 <maintainer@bioconductor.org>
Depends: BSgenome (>= 1.31.8), BSgenome.Cfamiliaris.UCSC.canFam3
Imports: BSgenome, BSgenome.Cfamiliaris.UCSC.canFam3
License: Artistic-2.0
organism: Canis lupus familiaris
species: Dog
provider: UCSC
provider_version: canFam3
release_date: Sep. 2011
release_name: Broad Institute v3.1
source_url: http://hgdownload.cse.ucsc.edu/goldenPath/canFam3/bigZips/
biocViews: AnnotationData, Genetics, BSgenome, Canis_familiaris
Packaged: 2014-01-08 20:13:44 UTC; hpages
Built: R 3.2.3; ; 2016-10-26 18:59:15 UTC; unix