Package: BSgenome.Ggallus.UCSC.galGal4.masked
Title: Full masked genome sequences for Gallus gallus (UCSC version
        galGal4)
Description: Full genome sequences for Gallus gallus (Chicken) as provided by UCSC (galGal4, Nov. 2011) and stored in Biostrings objects. The sequences are the same as in BSgenome.Ggallus.UCSC.galGal4, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.
Version: 1.3.99
Author: The Bioconductor Dev Team
Maintainer: Bioconductor Package Maintainer
 <maintainer@bioconductor.org>
Depends: BSgenome (>= 1.31.8), BSgenome.Ggallus.UCSC.galGal4
Imports: BSgenome, BSgenome.Ggallus.UCSC.galGal4
License: Artistic-2.0
organism: Gallus gallus
species: Chicken
provider: UCSC
provider_version: galGal4
release_date: Nov. 2011
release_name: ICGSC Gallus_gallus-4.0
source_url: http://hgdownload.cse.ucsc.edu/goldenPath/galGal4/bigZips/
biocViews: AnnotationData, Genetics, BSgenome, Gallus_gallus
Packaged: 2014-01-08 20:13:48 UTC; hpages
Built: R 3.2.3; ; 2016-10-26 19:11:17 UTC; unix