Package: BSgenome.Mmulatta.UCSC.rheMac3.masked Title: Full masked genome sequences for Macaca mulatta (UCSC version rheMac3) Description: Full genome sequences for Macaca mulatta (Rhesus) as provided by UCSC (rheMac3, Oct. 2010) and stored in Biostrings objects. The sequences are the same as in BSgenome.Mmulatta.UCSC.rheMac3, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default. Version: 1.3.99 Author: The Bioconductor Dev Team Maintainer: Bioconductor Package Maintainer Depends: BSgenome (>= 1.31.8), BSgenome.Mmulatta.UCSC.rheMac3 Imports: BSgenome, BSgenome.Mmulatta.UCSC.rheMac3 License: Artistic-2.0 organism: Macaca mulatta species: Rhesus provider: UCSC provider_version: rheMac3 release_date: Oct. 2010 release_name: Beijing Genomics Institute CR_1.0 source_url: http://hgdownload.soe.ucsc.edu/goldenPath/rheMac3/ biocViews: AnnotationData, Genetics, BSgenome, Macaca_mulatta Packaged: 2014-01-08 20:33:40 UTC; hpages Built: R 3.2.3; ; 2016-10-26 19:29:09 UTC; unix