Package: BSgenome.Mmusculus.UCSC.mm8.masked
Title: Full masked genome sequences for Mus musculus (UCSC version mm8)
Description: Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm8, Feb. 2006) and stored in Biostrings objects. The sequences are the same as in BSgenome.Mmusculus.UCSC.mm8, except that each of them has the 4 following masks on top: (1) the mask of assembly gaps (AGAPS mask), (2) the mask of intra-contig ambiguities (AMB mask), (3) the mask of repeats from RepeatMasker (RM mask), and (4) the mask of repeats from Tandem Repeats Finder (TRF mask). Only the AGAPS and AMB masks are "active" by default.
Version: 1.3.99
Author: The Bioconductor Dev Team
Maintainer: Bioconductor Package Maintainer
 <maintainer@bioconductor.org>
Depends: BSgenome (>= 1.31.8), BSgenome.Mmusculus.UCSC.mm8
Imports: BSgenome, BSgenome.Mmusculus.UCSC.mm8
License: Artistic-2.0
organism: Mus musculus
species: Mouse
provider: UCSC
provider_version: mm8
release_date: Feb. 2006
release_name: NCBI Build 36
source_url: http://hgdownload.cse.ucsc.edu/goldenPath/mm8/bigZips/
biocViews: AnnotationData, Genetics, BSgenome, Mus_musculus
Packaged: 2014-01-08 20:13:57 UTC; hpages
Built: R 3.2.3; ; 2016-10-26 19:33:16 UTC; unix