Infrastructure for Biostrings-based genome data packages and
support for efficient SNP representation
Infrastructure shared by all the Biostrings-based genome data
             packages
Genetics, Infrastructure, DataRepresentation,
SequenceMatching, Annotation, SNP
methods, stats, BiocGenerics, S4Vectors, IRanges, XVector,
GenomeInfoDb, GenomicRanges, Biostrings, Rsamtools, rtracklayer
BiocInstaller, Biobase, BSgenome.Celegans.UCSC.ce2,
BSgenome.Hsapiens.UCSC.hg38,
BSgenome.Hsapiens.UCSC.hg38.masked,
BSgenome.Mmusculus.UCSC.mm10, BSgenome.Rnorvegicus.UCSC.rn5,
TxDb.Hsapiens.UCSC.hg38.knownGene,
TxDb.Mmusculus.UCSC.mm10.knownGene,
SNPlocs.Hsapiens.dbSNP141.GRCh38,
XtraSNPlocs.Hsapiens.dbSNP141.GRCh38, hgu95av2probe, RUnit
utils.R OnDiskLongTable-class.R OnDiskNamedSequences-class.R
SNPlocs-class.R InjectSNPsHandler-class.R XtraSNPlocs-class.R
BSgenome-class.R available.genomes.R injectSNPs.R
getSeq-methods.R bsapply.R BSgenomeViews-class.R
BSgenome-utils.R export-methods.R BSgenomeForge.R