BCI.env Barro Colorado Island Quadrat Descriptions BiodiversityR-package GUI for biodiversity, suitability and community ecology analysis BiodiversityRGUI GUI for Biodiversity Analysis and Ordination CAPdiscrim Canonical Analysis of Principal Coordinates based on Discriminant Analysis NMSrandom Calculate the NMS Result with the Smallest Stress from Various Random Starts PCAsignificance PCA Significance accumresult Alternative Species Accumulation Curve Results add.spec.scores Add Species Scores to Unconstrained Ordination Results balanced.specaccum Balanced Species Accumulation Curves caprescale Rescaling of Capscale Results to Reflect Total Sums of Squares Of Distance Matrix crosstabanalysis Presence-absence Analysis by Cross Tabulation deviancepercentage Calculate Percentage and Significance of Deviance Explained by a GLM dist.eval Distance Matrix Evaluation dist.zeroes Distance Matrix Transformation distdisplayed Compare Distance Displayed in Ordination Diagram with Distances of Distance Matrix disttransform Community Matrix Transformation diversityresult Alternative Diversity Results ensemble.analogue Climate analogues from climatic distance raster layers. ensemble.batch Suitability mapping based on ensembles of modelling algorithms: batch processing ensemble.dummy.variables Suitability mapping based on ensembles of modelling algorithms: handling of categorical data ensemble.ecocrop Mapping of novel environmental conditions (areas where some of the environmental conditions are outside the range of environmental conditions of a reference area). ensemble.novel Mapping of novel environmental conditions (areas where some of the environmental conditions are outside the range of environmental conditions of a reference area). ensemble.raster Suitability mapping based on ensembles of modelling algorithms: consensus mapping ensemble.test Suitability mapping based on ensembles of modelling algorithms: comparison of different algorithms and calibration ensemble.zones Mapping of environmental zones based on the Mahalanobis distance from centroids in environmental space. evaluation.strip.data Evaluation strips for ensemble suitability mapping faramea Faramea occidentalis abundance in Panama ifri Example data from the International Forestry Resources and Institutions (IFRI) research network importancevalue Importance Value loaded.citations Give Citation Information for all Loaded Packages makecommunitydataset Make a Community Dataset from a Stacked Dataset multiconstrained Pairwise Comparisons for All Levels of a Categorical Variable by RDA, CCA or Capscale nested.anova.dbrda Nested Analysis of Variance via Distance-based Redundancy Analysis or Non-parametric Multivariate Analysis of Variance nnetrandom Calculate the NNET Result with the Smallest Value from Various Random Starts ordicoeno Coenoclines for an Ordination Axis ordisymbol Add Other Graphical Items to Ordination Diagrams radfitresult Alternative Rank Abundance Fitting Results rankabundance Rank Abundance Curves removeNAcomm Synchronize Community and Environmental Datasets renyiresult Alternative Renyi Diversity Results residualssurface Show and Interpolate Two Dimensional Distribution of Residuals spatialsample Spatial Sampling within a Polygon transfgradient Gradient for Hypothetical Example of Turover of Species Composition transfspecies Hypothetical Example of Turover of Species Composition warcom Warburgia ugandensis AFLP Scores warenv Warburgia ugandensis Population Structure