# go_term

go_id: GO:0090393
term: sepal giant cell development
ontology: BP
definition:
The process aimed at the progression of a sepal giant cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.


go_id: GO:0090394
term: negative regulation of excitatory postsynaptic potential
ontology: BP
definition:
Any process that prevents the establishment or decreases the extent of the excitatory postsynaptic potential (EPSP) which is a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.


go_id: GO:0090398
term: cellular senescence
ontology: BP
definition:
A cell aging process stimulated in response to cellular stress, whereby normal cells lose the ability to divide through irreversible cell cycle arrest.


go_id: GO:0090399
term: replicative senescence
ontology: BP
definition:
A cell aging process associated with the dismantling of a cell as a response to telomere shortening and/or cellular aging.


go_id: GO:0090400
term: stress-induced premature senescence
ontology: BP
definition:
A cellular senescence process associated with the dismantling of a cell as a response to environmental factors such as hydrogen peroxide or X-rays.


go_id: GO:0090401
term: viral-induced premature senescence
ontology: BP
definition:
A cellular senescence process associated with the dismantling of a cell as a response to viral infection.


go_id: GO:0090402
term: oncogene-induced cell senescence
ontology: BP
definition:
A cellular senescence process associated with the dismantling of a cell as a response to oncogenic stress, such as the activation of the Ras oncogenic family.


go_id: GO:0090403
term: oxidative stress-induced premature senescence
ontology: BP
definition:
A cellular senescence process associated with the dismantling of a cell as a response to oxidative stress, e.g. high levels of reactive oxygen species, such as superoxide anions, hydrogen peroxide, and hydroxyl radicals.


go_id: GO:0090407
term: organophosphate biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the biosynthesis of deoxyribose phosphate, the phosphorylated sugar 2-deoxy-erythro-pentose.


go_id: GO:0090408
term: phloem nitrate loading
ontology: BP
definition:
The process of loading nitrate into the sieve tube or companion cell of the phloem for long distance transport from source to sink.


go_id: GO:0090415
term: 7-hydroxymethyl chlorophyll a reductase activity
ontology: MF
definition:
Catalysis of the reaction: 7-hydroxymethyl chlorophyll a + 2 reduced ferredoxin + 2 H+ chlorophyll a + 2 oxidized ferredoxin + H2O.


go_id: GO:0090417
term: N-methylnicotinate transporter activity
ontology: MF
definition:
Enables the directed movement of N-methylnicotinate into, out of or within a cell, or between cells.


go_id: GO:0090419
term: negative regulation of transcription involved in G2/M transition of mitotic cell cycle
ontology: BP
definition:
Any process that inhibits or decreases the frequency, rate or extent of transcription of target genes that are transcribed as part of the G2/M transition of the mitotic cell cycle.


go_id: GO:0090421
term: embryonic meristem initiation
ontology: BP
definition:
Initiation of a region of tissue in a plant embryo that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation.


go_id: GO:0090422
term: thiamine pyrophosphate transporter activity
ontology: MF
definition:
Enables the directed movement of thiamine pyrophosphate into, out of or within a cell, or between cells.


go_id: GO:0090423
term: phytochelatin-metal complex formation
ontology: BP
definition:
A phytochelatin metabolic process in which a metal is incorporated with phytochelatin to form a complex.


go_id: GO:0090424
term: phytochelatin-metal-sulfur complex formation
ontology: BP
definition:
A phytochelatin metabolic process in which a metal and exogenous sulfur are incorporated with phytochelatin to form a complex.


go_id: GO:0090425
term: acinar cell differentiation
ontology: BP
definition:
The epithelial cell differentiation process in which a relatively unspecialized cell acquires specialized features of an acinar cell, a secretory cell that is grouped together with other cells of the same type to form grape-shaped clusters known as acini.


go_id: GO:0090428
term: perianth development
ontology: BP
definition:
The process whose specific outcome is the progression of the perianth over time, from its formation to the mature structure. The perianth is a collective phyllome structure composed of two or more petals, sepals, or tepals.


go_id: GO:0090429
term: detection of endogenous biotic stimulus
ontology: BP
definition:
The series of events in which an endogenous biotic stimulus is received by a cell and converted into a molecular signal.


go_id: GO:0090431
term: alkyl caffeate ester biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of ester derivatives of alkyl caffeate.


go_id: GO:0090435
term: protein localization to nuclear envelope
ontology: BP
definition:
A process in which a protein is transported to, or maintained at, a location within a nuclear envelope.


go_id: GO:0090436
term: leaf pavement cell development
ontology: BP
definition:
The process whose specific outcome is the progression of an leaf pavement cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a leaf pavement cell fate.


go_id: GO:0090437
term: socket cell differentiation
ontology: BP
definition:
The process in which a relatively unspecialized cell acquires specialized features of a socket cell, a shoot epidermal cell that surrounds a trichome and provides its support.


go_id: GO:0090439
term: tetraketide alpha-pyrone synthase activity
ontology: MF
definition:
Catalyzes the reaction: a hydroxyacyl-CoA + 3 malonyl-CoA + 2 H+ = a hydroxylated tetraketide alpha-pyrone + 3 CO2 + 4 coenzyme A .


go_id: GO:0090441
term: trehalose biosynthesis in response to heat stress
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.


go_id: GO:0090442
term: trehalose catabolism in response to heat stress
ontology: BP
definition:
The chemical reactions and pathways resulting in the degradation of trehalose that occur as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.


go_id: GO:0090443
term: FAR/SIN/STRIPAK complex
ontology: CC
definition:
A conserved protein phosphatase type 2A complex which contains a protein phosphatase type 2A, a protein phosphatase regulatory subunit, a striatin, an FHA domain protein and other subunits (at least six proteins). In fission yeast this complex negatively regulate the septation initiation network at the spindle pole body.


go_id: GO:0090444
term: regulation of nematode larval development, heterochronic
ontology: BP
definition:
Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and the rate at which this time point is reached.


go_id: GO:0090445
term: positive regulation of nematode larval development, heterochronic
ontology: BP
definition:
Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and increases the rate at which this time point is reached.


go_id: GO:0090446
term: negative regulation of nematode larval development, heterochronic
ontology: BP
definition:
Any process that modulates the consistent predetermined time point at which a nematode larva progresses from an initial condition to a later condition and decreases the rate at which this time point is reached.


go_id: GO:0090447
term: glycerol-3-phosphate 2-O-acyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: an acyl-CoA + sn-glycerol 3-phosphate = CoA + a 2-acyl-sn-glycerol 3-phosphate.


go_id: GO:0090448
term: glucosinolate:proton symporter activity
ontology: MF
definition:
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucosinolate(out) + H+(out) = glucosinolate(in) + H+(in).


go_id: GO:0090449
term: phloem glucosinolate loading
ontology: BP
definition:
The process of loading glucosinolates into the sieve tube or companion cell of the phloem for long distance transport from source to sink.


go_id: GO:0090451
term: cotyledon boundary formation
ontology: BP
definition:
The process in which boundaries between a cotyledon and the surrounding tissue are established and maintained.


go_id: GO:0090459
term: aspartate homeostasis
ontology: BP
definition:
Any process involved in the maintenance of an internal steady state of aspartate within an organism or cell.


go_id: GO:0090460
term: threonine homeostasis
ontology: BP
definition:
Any process involved in the maintenance of an internal steady state of threonine within an organism or cell.


go_id: GO:0090461
term: glutamate homeostasis
ontology: BP
definition:
Any process involved in the maintenance of an internal steady state of glutamate within an organism or cell.


go_id: GO:0090462
term: ornithine homeostasis
ontology: BP
definition:
Any process involved in the maintenance of an internal steady state of ornithine within an organism or cell.


go_id: GO:0090463
term: lysine homeostasis
ontology: BP
definition:
Any process involved in the maintenance of an internal steady state of lysine within an organism or cell.


go_id: GO:0090464
term: histidine homeostasis
ontology: BP
definition:
Any process involved in the maintenance of an internal steady state of histidine within an organism or cell.


go_id: GO:0090465
term: arginine homeostasis
ontology: BP
definition:
Any process involved in the maintenance of an internal steady state of arginine within an organism or cell.


go_id: GO:0090470
term: shoot organ boundary specification
ontology: BP
definition:
The process in which the basal boundary between the stem and both vegetative and reproductive organs are established and maintained.


go_id: GO:0090472
term: dibasic protein processing
ontology: BP
definition:
Any protein processing achieved by the cleavage of a peptide bond after two basic amino acids within a protein.


go_id: GO:0090473
term: lys-arg specific dibasic protein processing
ontology: BP
definition:
Any protein processing achieved by the cleavage of a peptide bond after a lysine-arginine amino acid residue combination within a protein.


go_id: GO:0090474
term: arg-arg specific dibasic protein processing
ontology: BP
definition:
Any protein processing achieved by the cleavage of a peptide bond after two consecutive arginine amino acid residues within a protein.


go_id: GO:0090475
term: lys-lys specific dibasic protein processing
ontology: BP
definition:
Any protein processing achieved by the cleavage of a peptide bond after two consecutive lysine amino acid residues within a protein.


go_id: GO:0090480
term: purine nucleotide-sugar transmembrane transport
ontology: BP
definition:
The directed movement of a purine nucleotide-sugar across a membrane. Purine nucleotide-sugars are purine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative.


go_id: GO:0090481
term: pyrimidine nucleotide-sugar transmembrane transport
ontology: BP
definition:
The directed movement of pyrimidine nucleotide-sugars across a membrane. Pyrimidine nucleotide-sugars are pyrimidine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative.


go_id: GO:0090483
term: phosphatidylglycerol-phosphatidylethanolamine phosphatidyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: phosphatidylglycerol + phosphatidylethanolamine = cardiolipin + ethanolamine.


go_id: GO:0090484
term: drug transporter activity
ontology: MF
definition:
Enables the directed movement of a drug into, out of or within a cell, or between cells. A drug is any naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism; in particular, any such substance used in the diagnosis, prevention, or treatment of disease.


go_id: GO:0090486
term: small RNA 2'-O-methyltransferase
ontology: MF
definition:
Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to the oxygen atom of a nucleoside residue in a small RNA molecule. Reaction: S-adenosyl-L-methionine + small RNA <=> S-adenosyl-L-homocysteine + small RNA containing a 3'-terminal 2'-O-methylnucleotide.


go_id: GO:0090487
term: secondary metabolite catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of secondary metabolites, the compounds that are not necessarily required for growth and maintenance of cells, and are often unique to a taxon.


go_id: GO:0090488
term: polo box domain specific binding
ontology: MF
definition:
Interacting selectively and non-covalently with a polo box domain of a protein. The polo box domain is involved in binding substrates of polo kinases.


go_id: GO:0090489
term: L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating, decarboxylating)
ontology: MF
definition:
Catalyzes the multi-step reaction: L-Tryptophan + 2 Oxygen + 2 NADPH + 2 H+ = Indole-3-acetaldehyde oxime + 3 H2O + 2 NADP+ + CO2. The individual reactions are: (1a) L-tryptophan + O2 + NADPH + H+ = N-hydroxy-L-tryptophan + NADP+ + H2O,(1b) N-hydroxy-L-tryptophan + O2 + NADPH + H+ = N,N-dihydroxy-L-tryptophan + NADP+ + H2O, and (1c) N,N-dihydroxy-L-tryptophan = (E)-indol-3-ylacetaldoxime + CO2 + H2O.


go_id: GO:0090491
term: N-hydroxy-L-tryptophan,NADPH:oxygen oxidoreductase (N-hydroxylating)
ontology: MF
definition:
Catalyzes the reaction: N-Hydroxy-L-tryptophan + Oxygen + NADPH + H+ = N,N-Dihydroxy-L-tryptophan + NADP+ + H2O.


go_id: GO:0090497
term: mesenchymal cell migration
ontology: BP
definition:
The orderly movement of a mesenchymal cell from one site to another, often during the development of a multicellular organism.


go_id: GO:0090498
term: extrinsic component of Golgi membrane
ontology: CC
definition:
The component of a Golgi membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.


go_id: GO:0090499
term: pimelyl-[acyl-carrier protein] methyl ester esterase activity
ontology: MF
definition:
Catalysis of the reaction: pimelyl-[acyl-carrier protein] methyl ester + H2O = pimelyl-[acyl-carrier protein] + methanol.


go_id: GO:0090500
term: endocardial cushion to mesenchymal transition
ontology: BP
definition:
A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.


go_id: GO:0090501
term: RNA phosphodiester bond hydrolysis
ontology: BP
definition:
The RNA metabolic process in which the phosphodiester bonds between ribonucleotides are cleaved by hydrolysis.


go_id: GO:0090502
term: RNA phosphodiester bond hydrolysis, endonucleolytic
ontology: BP
definition:
The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.


go_id: GO:0090503
term: RNA phosphodiester bond hydrolysis, exonucleolytic
ontology: BP
definition:
The chemical reactions and pathways involving the hydrolysis of terminal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.


go_id: GO:0090506
term: axillary shoot meristem initiation
ontology: BP
definition:
A developmental process that results in the initiation of an axillary shoot meristem. An axillary shoot meristem is a shoot meristem formed in the axil of a leaf.


go_id: GO:0090507
term: phenylethylamine metabolic process involved in synaptic transmission
ontology: BP
definition:
The chemical reactions and pathways involving phenylethylamine that contribute to synaptic transmission.


go_id: GO:0090508
term: phenylethylamine biosynthetic process involved in synaptic transmission
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of phenylethylamine that contribute to synaptic transmission.


go_id: GO:0090509
term: nickel cation import into cell
ontology: BP
definition:
The directed movement of nickel cations from outside of a cell into the intracellular region of a cell..


go_id: GO:0090510
term: anticlinal cell division
ontology: BP
definition:
A cell division process where the division plane is perpendicular to the surface of the organ. It adds cells to the existing cell layer or cell file.


go_id: GO:0090511
term: periclinal cell division
ontology: BP
definition:
A cell division process where the division plane is parallel to the surface of the organ. It creates a new cell layer or cell file.


go_id: GO:0090512
term: eisosome membrane domain/MCC
ontology: CC
definition:
A plasma membrane part that is composed of a furrow-like plasma membrane domain and associated integral transmembrane proteins.


go_id: GO:0090519
term: anoxia protection
ontology: BP
definition:
Any process in which an organism or cell protects itself from anoxia, which may also result in resistance to repeated exposure to anoxia.


go_id: GO:0090521
term: glomerular visceral epithelial cell migration
ontology: BP
definition:
The orderly movement of a podocyte from one site to another, often during the development of a multicellular organism or multicellular structure. A podocyte is a specialized kidney epithelial cell.


go_id: GO:0090522
term: vesicle tethering involved in exocytosis
ontology: BP
definition:
The initial long-distance interaction between secretory vesicles and exocytotic sites on target membranes resulting in the capture and stabilization of vesicles prior to SNARE-mediated docking and fusion.


go_id: GO:0090525
term: regulation of glycolysis involved in cellular glucose homeostasis
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of glycolysis as an integral part of cellular glucose homeostasis.


go_id: GO:0090526
term: regulation of gluconeogenesis involved in cellular glucose homeostasis
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of gluconeogenesis as an integral part of cellular glucose homeostasis.


go_id: GO:0090527
term: actin filament reorganization
ontology: BP
definition:
A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of actin filaments.


go_id: GO:0090528
term: smooth septate junction assembly
ontology: BP
definition:
The assembly of a smooth septate junction, a septate junction that lacks the regular arrays of electron-dense septae found in pleated septate junctions.


go_id: GO:0090529
term: cell septum assembly
ontology: BP
definition:
The assembly and arrangement of a cellular component that is composed of peptidoglycan and often chitin in addition to other materials and usually forms perpendicular to the long axis of a cell or hypha. It grows centripetally from the cell wall to the center of the cell and often functions in the compartmentalization of a cell into two daughter cells.


go_id: GO:0090531
term: L-ascorbic acid biosynthetic process via GDP-alpha-D-mannose
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of L-ascorbic acid via the intermediate GDP-alpha-D-mannose.


go_id: GO:0090532
term: L-ascorbic acid biosynthetic process via UDP-alpha-D-glucuronate
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of L-ascorbic acid via the intermediate UDP-alpha-D-glucuronate.


go_id: GO:0090533
term: cation-transporting ATPase complex
ontology: CC
definition:
Protein complex that carries out the reaction: ATP + H2O + cation(out) = ADP + phosphate + cation(in).


go_id: GO:0090535
term: WICH complex
ontology: CC
definition:
An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and WSTF (Williams Syndrome Transcription Factor). WICH plays roles in regulation of RNAP I and III transcription and in DNA replication and repair.


go_id: GO:0090536
term: NoRC complex
ontology: CC
definition:
An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2H in mammals, which contain two ISWI homologs) and a Tip5 homolog. In mammals, NoRC is involved in regulation of transcription from RNAP I and RNA polymerase III promoters.


go_id: GO:0090537
term: CERF complex
ontology: CC
definition:
An ISWI complex that contains an ATPase subunit of the ISWI family (specifically SNF2L in mammals, which contain two ISWI homologs) and a CECR2 homolog. In mammals, CERF is involved in regulation of transcription from RNA polymerase II promoters.


go_id: GO:0090540
term: bacterial cellulose biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as it occurs in certain types of bacteria, mainly Acetobacter, Sarcina ventriculi and Agrobacteria.


go_id: GO:0090541
term: MIT domain binding
ontology: MF
definition:
Interacting selectively and non-covalently with the MIT domain of a protein. The MIT domain is found in vacuolar sorting proteins, spastin (probable ATPase involved in the assembly or function of nuclear protein complexes), and a sorting nexin, which may play a role in intracellular trafficking.


go_id: GO:0090542
term: ELYC domain binding
ontology: MF
definition:
Interacting selectively and non-covalently with the ELYC domain of a protein. The ELYC domain is an approximately 150 amino acid sequence which contains a highly conserved tetrapeptide sequence, ELYC.


go_id: GO:0090543
term: Flemming body
ontology: CC
definition:
A cell part that is the central region of the midbody characterized by a gap in alpha-tubulin staining. It is a dense structure of antiparallel microtubules from the central spindle in the middle of the intercellular bridge.


go_id: GO:0090545
term: CHD-type complex
ontology: CC
definition:
A SWI/SNF-type complex that contains a subunit from the CHD(Chromodomain helicase DNA-binding) family. The CHD family is characterized by two signature sequence motifs: tandem chromodomains located in the N-terminal region, and the SNF2-like ATPase domain located in the central region of the protein structure.


go_id: GO:0090546
term: chlorophyll fluorescence
ontology: BP
definition:
The process by which excess light energy absorbed by chlorophyll and not used to drive photosynthesis is re-emitted as light.


go_id: GO:0090547
term: response to low humidity
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of low humidity stimulus, reduced moisture in the atmosphere.


go_id: GO:0090548
term: response to nitrate starvation
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nitrate.


go_id: GO:0090549
term: response to carbon starvation
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of a carbon source.


go_id: GO:0090550
term: response to molybdenum starvation
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of molybdenum.


go_id: GO:0090551
term: response to manganese starvation
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of manganese.


go_id: GO:0090554
term: phosphatidylcholine-translocating ATPase activity
ontology: MF
definition:
Catalysis of the movement of phosphatidylcholine from one membrane bilayer leaflet to the other, driven by the hydrolysis of ATP.


go_id: GO:0090555
term: phosphatidylethanolamine-translocating ATPase activity
ontology: MF
definition:
Catalysis of the movement of phosphatidylethanolamine from one membrane bilayer leaflet to the other, driven by the hydrolysis of ATP.


go_id: GO:0090556
term: phosphatidylserine-translocating ATPase activity
ontology: MF
definition:
Catalysis of the movement of phosphatidylserine from one membrane bilayer leaflet to the other, driven by the hydrolysis of ATP.


go_id: GO:0090557
term: establishment of endothelial intestinal barrier
ontology: BP
definition:
The establishment of a barrier between endothelial cell layers of the intestine to exert specific and selective control over the passage of water and solutes, thus allowing formation and maintenance of compartments that differ in fluid and solute composition.


go_id: GO:0090558
term: plant epidermis development
ontology: BP
definition:
The process whose specific outcome is the progression of the plant epidermis over time, from its formation to the mature structure.


go_id: GO:0090559
term: regulation of membrane permeability
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by a membrane.


go_id: GO:0090560
term: 2-(3-amino-3-carboxypropyl)histidine synthase activity
ontology: MF
definition:
Catalysis of the reaction S-adenosyl-L-methionine + L-histidine-[translation elongation factor 2] = S-methyl-5-thioadenosine + 2-[(3S)-3-amino-3-carboxypropyl]-L-histidine-[translation elongation factor 2].


go_id: GO:0090561
term: nuclear migration during mitotic telophase
ontology: BP
definition:
The dynein-driven microtubule based nuclear migration, whereby daughter nuclei are positioned away from the cell division site prior to cytokinesis.


go_id: GO:0090562
ontology: MF
term:
protein-N(PI)-phosphohistidine-N,N'-diacetylchitobiose phosphotransferase system transporter activity

definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N,N'-diacetylchitobiose(out) = protein histidine + N,N'-diacetylchitobiose phosphate(in).


go_id: GO:0090563
term: protein-phosphocysteine-sugar phosphotransferase activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + sugar(out) = protein cysteine + sugar phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.


go_id: GO:0090564
term: protein-phosphocysteine-glucose phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + glucose(out) = protein cysteine + glucose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.


go_id: GO:0090565
term: protein-phosphocysteine-mannitol phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannitol(out) = protein cysteine + mannitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.


go_id: GO:0090566
term: protein-phosphocysteine-N,N'-diacetylchitobiose phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N,N'-diacetylchitobiose(out) = protein cysteine + N,N'-diacetylchitobiose phosphate(in).


go_id: GO:0090567
term: reproductive shoot system development
ontology: BP
definition:
The process whose specific outcome is the progression of a reproductive shoot system over time, from its formation to the mature structure.


go_id: GO:0090568
term: nuclear transcriptional repressor complex
ontology: CC
definition:
A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription.


go_id: GO:0090569
term: cytoplasmic transcriptional repressor complex
ontology: CC
definition:
A protein complex, located in the cytoplasm, that possesses activity that prevents or downregulates transcription.


go_id: GO:0090570
term: RNA polymerase I transcription repressor complex
ontology: CC
definition:
A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase I promoter.


go_id: GO:0090571
term: RNA polymerase II transcription repressor complex
ontology: CC
definition:
A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase II promoter.


go_id: GO:0090572
term: RNA polymerase III transcription repressor complex
ontology: CC
definition:
A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase III promoter.


go_id: GO:0090573
term: RNA polymerase IV transcription repressor complex
ontology: CC
definition:
A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase IV promoter.


go_id: GO:0090574
term: RNA polymerase V transcription repressor complex
ontology: CC
definition:
A protein complex, located in the nucleus, that possesses activity that prevents or downregulates transcription from a RNA polymerase V promoter.


go_id: GO:0090579
term: dsDNA loop formation
ontology: BP
definition:
The formation and maintenance of DNA loops that juxtapose separated regions on the same dsDNA molecule.


go_id: GO:0090580
term: phosphodiesterase activity, acting on 3'-phosphoglycolate-terminated DNA strands
ontology: MF
definition:
Catalysis of the hydrolytic removal of phosphoglycolate from the 3'-terminus of a 3'-phosphoglycolate-terminated oligonucleotides.


go_id: GO:0090581
term: protein-phosphocysteine-mannosylglycerate-phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + mannosylglycerate(out) = protein cysteine + mannosylglycerate phosphate(in).


go_id: GO:0090582
term: protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-fructose(out) = protein cysteine + D-fructose-1-phosphate(in).


go_id: GO:0090583
term: protein-phosphocysteine-D-sorbitol-phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-sorbitol(out) = protein cysteine + D-sorbitol-1-phosphate(in).


go_id: GO:0090584
term: protein-phosphocysteine-galactitol-phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + galactitol(out) = protein cysteine + galactitol-6-phosphate(in).


go_id: GO:0090585
term: protein-phosphocysteine-L-ascorbate-phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + L-ascorbate(out) = protein cysteine + L-ascorbate-6-phosphate(in).


go_id: GO:0090586
term: protein-phosphocysteine-N-acetylglucosamine phosphotransferase system transporter activity
ontology: MF
definition:
: Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N-acetylglucosamine (out) = protein cysteine + N-acetylglucosamine-6-phosphate (in).


go_id: GO:0090587
term: protein-phosphocysteine-glucosamine phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + glucosamine (out) = protein cysteine + glucosamine-6-phosphate (in).


go_id: GO:0090588
term: protein-phosphocysteine-N-acetylmuramate phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N-acetylmuramate (out) = protein cysteine + N-acetylmuramate-6-phosphate (in).


go_id: GO:0090589
term: protein-phosphocysteine-trehalose phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + trehalose (out) = protein cysteine + trehalose-6-phosphate (in).


go_id: GO:0090590
term: protein-N(PI)-phosphohistidine-D-glucosamine phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + D-glucosamine(out) = protein histidine + glucosamine-6-phosphate(in).


go_id: GO:0090591
term: protein-N(PI)-phosphohistidine-N-acetyl-mannosamine phosphotransferase system transporter activity
ontology: MF
definition:
Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetyl-mannosamine(out) = protein histidine +N-acetyl- mannosamine-6-phosphate(in).


go_id: GO:0090593
term: peptidyl-histidine autophosphorylation
ontology: BP
definition:
The phosphorylation by a protein of one or more of its own histidine residues, or a histidine residue on an identical protein.


go_id: GO:0090594
term: inflammatory response to wounding
ontology: BP
definition:
The immediate defensive reaction by vertebrate tissue to injury caused by chemical or physical agents.


go_id: GO:0090596
term: sensory organ morphogenesis
ontology: BP
definition:
Morphogenesis of a sensory organ. A sensory organ is defined as a tissue or set of tissues that work together to receive and transmit signals from external or internal stimuli. Morphogenesis is the process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.


go_id: GO:0090597
term: nematode male tail mating organ morphogenesis
ontology: BP
definition:
The process in which the anatomical structures of the nematode male tail mating organ are generated and organized. The male tail is a sensory organ required for mating and, in C. elegans, consists of ray sensilla, an acellular cuticular fan, a sensory hook, and protracting, copulatory spicules.


go_id: GO:0090598
term: male anatomical structure morphogenesis
ontology: BP
definition:
The processes by which anatomical structures that are only present in the male organism are generated and organized.


go_id: GO:0090599
term: alpha-glucosidase activity
ontology: MF
definition:
Catalysis of the hydrolysis of terminal, non-reducing alpha-linked alpha-D-glucose residue with release of alpha-D-glucose.


go_id: GO:0090600
term: alpha-1,3-glucosidase activity
ontology: MF
definition:
Catalysis of the hydrolysis of terminal, non-reducing alpha-(1->3)-linked alpha-D-glucose residues with release of alpha-D-glucose.


go_id: GO:0090602
term: sieve element enucleation
ontology: BP
definition:
The process in which nucleated precursor cells lose their nucleus as part of sieve element differentiation. The nuclear contents are released and degraded in the cytoplasm at the same time as other organelles are rearranged and the cytosol is degraded.


go_id: GO:0090603
term: sieve element differentiation
ontology: BP
definition:
The process whereby a relatively unspecialized cell acquires specialized features of a sieve element.


go_id: GO:0090604
term: surface biofilm formation
ontology: BP
definition:
A process in which planktonically growing microorganisms grow at the surface of a liquid-air interface and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.


go_id: GO:0090605
term: submerged biofilm formation
ontology: BP
definition:
A process in which planktonically growing microorganisms aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription.


go_id: GO:0090606
term: single-species surface biofilm formation
ontology: BP
definition:
A process in which planktonically growing microorganisms of the same species grow at the surface of a liquid-air interface and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.


go_id: GO:0090607
term: multi-species surface biofilm formation
ontology: BP
definition:
A process in which planktonically growing microorganisms of different species grow at the surface of a liquid-air interface and produce extracellular polymers that facilitate matrix formation, resulting in a change in the organisms' growth rate and gene transcription.


go_id: GO:0090608
term: multi-species submerged biofilm formation
ontology: BP
definition:
A process in which planktonically growing microorganisms of different species aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription.


go_id: GO:0090609
term: single-species submerged biofilm formation
ontology: BP
definition:
A process in which planktonically growing microorganisms of the same species aggregate and grow on solid substrates under the flow of a liquid and produce extracellular polymers that facilitate attachment and matrix formation, resulting in a change in the organisms' growth rate and gene transcription.


go_id: GO:0090610
term: bundle sheath cell fate specification
ontology: BP
definition:
The process in which a cell becomes capable of differentiating autonomously into a bundle sheath cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.


go_id: GO:0090611
term: ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of a protein or peptide, via the multivesicular body (MVB) sorting pathway; proteins are sorted into MVBs, and delivered to a lysosome/vacuole for degradation.  This process is independent of ubiquitination.


go_id: GO:0090612
term: cAMP deaminase activity
ontology: MF
definition:
Catalysis of the reaction: cyclic adenosine monophosphate + H2O = cyclic inosine monophosphate + NH3.


go_id: GO:0090615
term: mitochondrial mRNA processing
ontology: BP
definition:
Steps involved in processing precursor RNAs arising from transcription of operons in the mitochondrial genome into mature mRNAs.


go_id: GO:0090616
term: mitochondrial mRNA 3'-end processing
ontology: BP
definition:
Any process involved in forming the mature 3' end of an mRNA molecule that derives from the mitochondrial genome.


go_id: GO:0090617
term: mitochondrial mRNA 5'-end processing
ontology: BP
definition:
Any process involved in forming the mature 5' end of an mRNA molecule that derives from the mitochondrial genome.


go_id: GO:0090618
term: DNA clamp unloading
ontology: BP
definition:
The process of removing the PCNA complex from DNA when Okazaki fragments are completed or the replication fork terminates.


go_id: GO:0090619
term: meiotic spindle pole
ontology: CC
definition:
Either of the ends of a meiotic spindle, a spindle that forms as part of meiosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.


go_id: GO:0090620
term: APC-Cdc20 complex
ontology: CC
definition:
An anaphase promoting complex bound to the "fizzy family" APC activator Cdc20/Slp1 whichnregulates the metaphase anaphase transition by activating the APC/C to target the anaphase inhibitor securin and promotes sister chromatid separation.


go_id: GO:0090621
term: APC-fizzy-related complex
ontology: CC
definition:
An anaphase promoting complex bound to the "fizzy-related family" APC activator FZR1/Cdh1/Srw1 that regulates mitotic exit by activating the APC/C to target mitotic cyclins for destruction during anaphase and telophase. Is also active during G1.


go_id: GO:0090623
term: activation of APC-fizzy related complex activity
ontology: BP
definition:
Any process that initiates the ubiquitin ligase activity of the APC-fizzy related complex that regulates the exit from mitosis.


go_id: GO:0090624
term: endoribonuclease activity, cleaving miRNA-paired mRNA
ontology: MF
definition:
Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an miRNA.


go_id: GO:0090625
term: mRNA cleavage involved in gene silencing by siRNA
ontology: BP
definition:
The process in which small interfering RNAs (siRNAs) direct the cleavage of target mRNAs. Once incorporated into a RNA-induced silencing complex (RISC), a siRNA will typically direct cleavage by base pairing with perfect or near-perfect complementarity to the target mRNA.


go_id: GO:0090627
term: plant epidermal cell differentiation
ontology: BP
definition:
The process in which a relatively unspecialized cell acquires specialized features of a plant epidermal cell.


go_id: GO:0090628
term: plant epidermal cell fate specification
ontology: BP
definition:
The process in which a cell becomes capable of differentiating autonomously into a plant epidermal cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.


go_id: GO:0090629
term: lagging strand initiation
ontology: BP
definition:
The process in which the synthesis of DNA from a template strand in a net 3' to 5' direction is started.


go_id: GO:0090630
term: activation of GTPase activity
ontology: BP
definition:
Any process that initiates the activity of an inactive GTPase through the replacement of GDP by GTP.


go_id: GO:0090635
term: extracellular core region of desmosome
ontology: CC
definition:
The desmosomal part containing the desmosomal cadherins, desmogleins and desmocollins, that establish contact and adhere to neighboring cells in a Ca2+-dependent manner.


go_id: GO:0090636
term: outer dense plaque of desmosome
ontology: CC
definition:
The desmosomal part containing plakoglobins, plakophilins, the N-termini of desmoplakins,  as well as the cytoplasmic tails of the desmosomal cadherins, which together attach the plaque to the plasma membrane.


go_id: GO:0090637
term: inner dense plaque of desmosome
ontology: CC
definition:
The desmosomal part containing the C-termini of desmoplakins which interact with the keratin intermediate filaments, serving to tether the intermediate filaments to the plasma membrane.


go_id: GO:0090638
term: phosphatidylcholine biosynthesis from phosphatidylethanolamine
ontology: BP
definition:
The phosphatidylcholine biosynthetic process that depends on direct conversion of the phosphatidyl-base phosphatidylethanolamine to phosphatidylcholine by successive methylations.


go_id: GO:0090639
term: phosphatidylcholine biosynthesis from choline and CDP-diacylglycerol
ontology: BP
definition:
The phosphatidylcholine biosynthetic process that involves a one-step direct condensation of choline with CDP-diacylglycerol to form phosphatidylcholine.


go_id: GO:0090640
term: phosphatidylcholine biosynthesis from sn-glycero-3-phosphocholine
ontology: BP
definition:
The phosphatidylcholine biosynthetic process that involves the two-step acylation of sn-glycero-3-phosphocholine to a phosphatidylcholine.


go_id: GO:0090641
term: microsporidian-type endospore
ontology: CC
definition:
The middle layer in a microsporidian spore wall that lies under the exospore and outside the plasma membrane, containing chitin and proteins.


go_id: GO:0090642
term: microsporidian-type exospore
ontology: CC
definition:
The dense, protein rich outermost layer of a microsporidian spore wall that lies above the endospore.


go_id: GO:0090643
term: inflorescence phyllotactic patterning
ontology: BP
definition:
The radial pattern formation process that results in the formation of flowers around a central axis in an inflorescence meristem.


go_id: GO:0090644
term: age-related resistance
ontology: BP
definition:
An innate immune response that is positively correlated with host plant development. As a plant develops, its innate resistance to pathogenic infections increases. The mechanisms involved in age-related resistance differ in nature or in aspects of regulation from the hypersensitive response (HR), systemic acquired resistance (SAR), or induced systemic resistance (ISR).


go_id: GO:0090646
term: mitochondrial tRNA processing
ontology: BP
definition:
The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group,  in the mitochondrion.


go_id: GO:0090648
term: response to environmental enrichment
ontology: BP
definition:
Any process that results in a change in state or activity of an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the provision of a combination of complex inanimate and social stimulations in the organism's housing environment.


go_id: GO:0090649
term: response to oxygen-glucose deprivation
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the deprivation of oxygen and glucose.


go_id: GO:0090650
term: cellular response to oxygen-glucose deprivation
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the deprivation of oxygen and glucose.


go_id: GO:0090651
term: apical cytoplasm
ontology: CC
definition:
The region of the cytoplasm located at the apical side of the cell. Used in reference to animal polarized epithelial cells.


go_id: GO:0090652
term: basolateral cytoplasm
ontology: CC
definition:
The region of the cytoplasm located at the basolateral side of the cell. Used in reference to animal polarized epithelial cells.


go_id: GO:0090653
term: apical recycling endosome
ontology: CC
definition:
Tubulo-vesicular structure located in the apical cytoplasm that participates in apical cargo recycling in polarized epithelial cells.


go_id: GO:0090654
term: basolateral recycling endosome
ontology: CC
definition:
Tubulo-vesicular structure located in the basolateral cytoplasm that participates in basolateral cargo recycling in polarized epithelial cells.


go_id: GO:0090655
term: double-stranded/single-stranded junction telomeric DNA binding
ontology: MF
definition:
Interacting selectively and non-covalently with the junction formed at the point where double-stranded telomeric DNA becomes a single-stranded G-rich telomeric DNA 3' overhang.


go_id: GO:0090656
term: t-circle formation
ontology: BP
definition:
A telomere maintenance process that results in the formation of a telomeric circle, or t-circle. A t-circle is an extrachromosomal duplex or single-stranded circular DNA molecule composed of t-arrays. T-circles are involved in the control of telomere length via alternative-lengthening of telomeres (ALT) pathway and telomere rapid deletion (TRD).


go_id: GO:0090657
term: telomeric loop disassembly
ontology: BP
definition:
The telomere maintenance process in which telomeric loops are disassembled to permit efficient telomere replication.


go_id: GO:0090658
term: cone matrix sheath
ontology: CC
definition:
A biochemically and structurally distinct domain of the retinal interphotoreceptor matrix that is specifically associated with cone photoreceptor cell inner and outer segments.


go_id: GO:0090659
term: walking behavior
ontology: BP
definition:
The behavior of an organism relating to the progression of that organism along the ground by the process of lifting and setting down each leg.


go_id: GO:0090660
term: cerebrospinal fluid circulation
ontology: BP
definition:
The neurological system process driven by motile cilia on ependymal cells of the brain by which cerebrospinal fluid circulates from the sites of secretion to the sites of absorption. In ventricular cavities, the flow is unidirectional and rostrocaudal, in subarachnoid spaces, the flow is multidirectional.


go_id: GO:0093001
term: glycolysis from storage polysaccharide through glucose-1-phosphate
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of a storage polysaccharide into pyruvate through a glucose-1-phosphate intermediate, with the concomitant production of a small amount of ATP and the reduction of NAD to NADH.


go_id: GO:0093002
term: response to nematicide
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nematicide stimulus. Nematicides are chemicals used to kill nematodes.


go_id: GO:0097001
term: ceramide binding
ontology: MF
definition:
Interacting selectively and non-covalently with any ceramide, a class of lipids that is composed of sphingosine linked to a fatty acid. Ceramides are a major component of cell membranes.


go_id: GO:0097002
term: mitochondrial inner boundary membrane
ontology: CC
definition:
The portion of the mitochondrial inner membrane that is not invaginated to form cristae. The inner boundary membrane lies parallel to the outer membrane.


go_id: GO:0097003
term: adipokinetic hormone receptor activity
ontology: MF
definition:
Combining with an adipokinetic hormone to initiate a change in cell activity. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.


go_id: GO:0097004
term: adipokinetic hormone binding
ontology: MF
definition:
Interacting selectively and non-covalently with an adipokinetic hormone. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.


go_id: GO:0097005
term: adipokinetic hormone receptor binding
ontology: MF
definition:
Interacting selectively and non-covalently with an adipokinetic hormone receptor. Adipokinetic hormones (AKHs) are peptide hormones that are involved in the mobilization of sugar and lipids from the insect fat body during energy-requiring activities such as flight and locomotion. They also contribute to hemolymph sugar homeostasis.


go_id: GO:0097006
term: regulation of plasma lipoprotein particle levels
ontology: BP
definition:
Any process involved in the maintenance of internal levels of plasma lipoprotein particles within an organism.


go_id: GO:0097007
term: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity
ontology: MF
definition:
Catalysis of the reaction: (EE)-geranyllinalool + NADPH + O2 = 4,8,12-trimethyl-1,3,7,11-tridecatetraene + NADP+ + 2 H2O. It is unknown whether this reaction proceeds by the direct release of the 4-carbon compound but-1-en-3-one, or whether the substrate is first degraded to C18-farnesylacetone and then cleaved to produce 4,8,12-trimethyl-1,3,7,11-tridecatetraene (TMTT) and acetone.


go_id: GO:0097008
term: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity
ontology: MF
definition:
Catalysis of the reaction: (E)-nerolidol + NADPH + O2 = (3E)-4,8-dimethylnona-1,3,7-triene + NADP+ + 2 H2O. It is unknown whether this reaction proceeds by the direct release of the 4-carbon compound but-1-en-3-one, or whether the substrate is first degraded to C11-geranylacetone and then cleaved to produce (3E)-4,8-dimethylnona-1,3,7-triene (DMNT) and acetone.


go_id: GO:0097010
term: eukaryotic translation initiation factor 4F complex assembly
ontology: BP
definition:
The aggregation, arrangement and bonding together of a set of components to form the eukaryotic translation initiation factor 4F complex.


go_id: GO:0097011
term: cellular response to granulocyte macrophage colony-stimulating factor stimulus
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte macrophage colony-stimulating factor stimulus.


go_id: GO:0097012
term: response to granulocyte macrophage colony-stimulating factor
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a granulocyte macrophage colony-stimulating factor stimulus.


go_id: GO:0097015
term: bacterial-type flagellar cytoplasm
ontology: CC
definition:
All of the contents of a bacterial-type flagellum, excluding the plasma membrane surrounding the flagellum.


go_id: GO:0097016
term: L27 domain binding
ontology: MF
definition:
Interacting selectively and non-covalently with a L27 domain of a protein. L27 is composed of conserved negatively charged amino acids and a conserved aromatic amino acid. L27 domains can assemble proteins involved in signaling and establishment and maintenance of cell polarity into complexes by interacting in a heterodimeric manner.


go_id: GO:0097017
term: renal protein absorption
ontology: BP
definition:
A renal system process in which proteins are taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures (e.g. protein absorption is observed in nephrocytes in Drosophila, see PMID:23264686).


go_id: GO:0097018
term: renal albumin absorption
ontology: BP
definition:
A renal system process in which albumin is taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron.


go_id: GO:0097020
term: COPII adaptor activity
ontology: MF
definition:
The binding activity of a molecule that brings together the COPII vesicle proteins and one or more other molecules, permitting them to function in a coordinated way.


go_id: GO:0097021
term: lymphocyte migration into lymphoid organs
ontology: BP
definition:
The movement of a lymphocyte within the lymphatic system into lymphoid organs such as lymph nodes, spleen or Peyer's patches, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen.


go_id: GO:0097022
term: lymphocyte migration into lymph node
ontology: BP
definition:
The movement of a lymphocyte within the lymphatic system into a lymph node, and its subsequent positioning within defined functional compartments such as sites of cell activation by antigen.


go_id: GO:0097023
term: fructose 6-phosphate aldolase activity
ontology: MF
definition:
Catalysis of the reaction: D-fructose-6-phosphate = dihydroxyacetone + D-glyceraldehyde-3-phosphate.


go_id: GO:0097025
term: MPP7-DLG1-LIN7 complex
ontology: CC
definition:
A heterotrimeric protein complex formed by the association of MMP7, DLG1 and either LIN7A or LIN7C; regulates the stability and localization of DLG1 to cell junctions.


go_id: GO:0097026
term: dendritic cell dendrite assembly
ontology: BP
definition:
Formation of dendrites, branched cellular projections (or cytoplasmic extension) that are extended from the surface of a dendritic immune cell, and which enable the cell to sample luminal pathogens and increase the surface area for antigen presentation to T cells.


go_id: GO:0097027
term: ubiquitin-protein transferase activator activity
ontology: MF
definition:
Increases the activity of a ubiquitin-protein transferase, an enzyme that catalyzes the covalent attachment of ubiquitin to lysine in a substrate protein.


go_id: GO:0097028
term: dendritic cell differentiation
ontology: BP
definition:
The process in which a precursor cell type acquires the specialized features of a dendritic cell. A dendritic cell is a leukocyte of dendritic lineage specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.


go_id: GO:0097029
term: mature conventional dendritic cell differentiation
ontology: BP
definition:
The process in which antigen-activated dendritic cells acquire the specialized features of a mature conventional dendritic cell. Mature conventional dendritic cells upregulate the surface expression of MHC molecules, chemokine receptors and adhesion molecules, and increase the number of dendrites (cytoplasmic protrusions) in preparation for migration to lymphoid organs where they present antigen to T cells.


go_id: GO:0097030
term: CENP-A containing nucleosome binding
ontology: MF
definition:
Interacting selectively and non-covalently with a centromere-specific nucleosome, a form of nucleosome located only at the centromere, in which the histone H3 is replaced by the variant form CENP-A (sometimes known as CenH3).


go_id: GO:0097031
term: mitochondrial respiratory chain complex I biogenesis
ontology: BP
definition:
The biogenesis of a mitochondrial respiratory chain complex I, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.


go_id: GO:0097032
term: mitochondrial respiratory chain complex II biogenesis
ontology: BP
definition:
The biogenesis of a mitochondrial respiratory chain complex II, a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.


go_id: GO:0097033
term: mitochondrial respiratory chain complex III biogenesis
ontology: BP
definition:
The biogenesis of a mitochondrial respiratory chain complex III (also known as cytochrome bc(1) complex or ubiquinol-cytochrome c reductase), a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.


go_id: GO:0097034
term: mitochondrial respiratory chain complex IV biogenesis
ontology: BP
definition:
The biogenesis of a mitochondrial respiratory chain complex IV (also known as cytochrome c oxidase complex), a protein complex located in the mitochondrial inner membrane that forms part of the mitochondrial respiratory chain. Includes the synthesis of constituent proteins and their aggregation, arrangement and bonding together.


go_id: GO:0097036
term: regulation of plasma membrane sterol distribution
ontology: BP
definition:
Any process that modulates the proportions or spatial arrangement of sterols in the plasma membrane.


go_id: GO:0097038
term: perinuclear endoplasmic reticulum
ontology: CC
definition:
The portion of endoplasmic reticulum, the intracellular network of tubules and cisternae, that occurs near the nucleus. The lumen of the perinuclear endoplasmic reticulum is contiguous with the nuclear envelope lumen (also called perinuclear space), the region between the inner and outer nuclear membranes.


go_id: GO:0097039
term: protein linear polyubiquitination
ontology: BP
definition:
A protein ubiquitination process in which a linear polymer of ubiquitin, formed by the amino-terminal methionine (M1) of one ubiquitin molecule and by the carboxy-terminal glycine (G76) of the next, is added to a protein.


go_id: GO:0097040
term: phthiocerol biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of phthiocerol, a lipid-based 1,3-glycol consisting of (3S,4R)-3-methoxy-4-methylnonacosane having (9R)- and (11S)-hydroxy substituents.


go_id: GO:0097041
term: phenolic phthiocerol biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of phenolic phthiocerol, a phthiocerol derivative having a 4-hydroxyphenyl substituent at the 29-position.


go_id: GO:0097042
term: extrinsic component of fungal-type vacuolar membrane
ontology: CC
definition:
The component of a fungal-type vacuolar membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.


go_id: GO:0097043
term: histone H3-K56 acetylation
ontology: BP
definition:
The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 56 of the histone.


go_id: GO:0097044
term: histone H3-K56 acetylation in response to DNA damage
ontology: BP
definition:
The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 56 of the histone as a result of the detection of DNA damage within a cell.


go_id: GO:0097045
term: phosphatidylserine exposure on blood platelet
ontology: BP
definition:
A phospholipid scrambling process that results in the appearance of phosphatidylserine on the surface of activated blood platelets, and triggers the clotting system.


go_id: GO:0097046
term: replication fork progression beyond termination site
ontology: BP
definition:
Regulation of DNA replication by a mechanism that allows a DNA replication fork to progress beyond a termination site, which is a region containing fork pausing elements that influence the progression and merging of DNA replication forks.


go_id: GO:0097047
term: DNA replication termination region
ontology: CC
definition:
A chromosomal region that contains fork pausing elements influencing the progression and merging of DNA replication forks.


go_id: GO:0097048
term: dendritic cell apoptotic process
ontology: BP
definition:
Any apoptotic process in a dendritic cell, a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.


go_id: GO:0097049
term: motor neuron apoptotic process
ontology: BP
definition:
Any apoptotic process in a motor neuron, an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.


go_id: GO:0097050
term: type B pancreatic cell apoptotic process
ontology: BP
definition:
Any apoptotic process in a type B pancreatic cell, a cell located towards center of the islets of Langerhans that secretes insulin.


go_id: GO:0097052
term: L-kynurenine metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving L-kynurenine, the L-enantiomer of the amino acid kynurenine (3-(2-aminobenzoyl)-alanine).


go_id: GO:0097053
term: L-kynurenine catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of L-kynurenine, the L-enantiomer of the amino acid kynurenine (3-(2-aminobenzoyl)-alanine).


go_id: GO:0097054
term: L-glutamate biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of L-glutamate, the L enantiomer anion of 2-aminopentanedioic acid.


go_id: GO:0097055
term: agmatine biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of agmatine ((4-aminobutyl)guanidine, NH2-CH2-CH2-CH2-CH2-NH-C(-NH2)(=NH)). Agmatine is the decarboxylation product of the amino acid arginine and is an intermediate in polyamine biosynthesis. It is synthesized in the brain, stored in synaptic vesicles, accumulated by uptake, released by membrane depolarization, and inactivated by agmatinase.


go_id: GO:0097056
term: selenocysteinyl-tRNA(Sec) biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of selenocysteinyl-tRNA(Sec). This process occurs through the following steps: a unique serine-tRNA with a UGA recognizing anticodon is first aminoacylated with serine; this is then phosphorylated by phosphoseryl-tRNA[Ser]Sec kinase; lastly, selenium is swapped for the phosphate on the serine.


go_id: GO:0097057
term: TRAF2-GSTP1 complex
ontology: CC
definition:
A protein complex comprising tumor necrosis factor (TNF) receptor-associated factor 2 (TRAF2) and glutathione S-transferase pi 1 (GSTP1). This complex is thought to disrupt the TNF signaling cascade, thus down-regulating inflammatory responses.


go_id: GO:0097058
term: CRLF-CLCF1 complex
ontology: CC
definition:
A heterodimeric protein complex that is composed of cardiotrophin-like cytokine factor 1 (product of the CLCF1 gene) and cytokine receptor-like factor 1 (product of the CRLF gene) and is secreted into the extracellular space. The CRLF-CLCF1 complex is a ligand for the ciliary neurotrophic factor (CNTF) receptor complex.


go_id: GO:0097059
term: CNTFR-CLCF1 complex
ontology: CC
definition:
A protein complex that is composed of two soluble ciliary neurotrophic factor receptor alpha subunits (product of the CNTFR gene) and two molecules of cardiotrophin-like cytokine factor 1 (product of the CLCF1 gene). The complex is secreted into the extracellular space.


go_id: GO:0097060
term: synaptic membrane
ontology: CC
definition:
A specialized area of membrane on either the presynaptic or the postsynaptic side of a synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.


go_id: GO:0097061
term: dendritic spine organization
ontology: BP
definition:
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dendritic spine. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission.


go_id: GO:0097062
term: dendritic spine maintenance
ontology: BP
definition:
The organization process that preserves a dendritic spine in a stable functional or structural state. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission.


go_id: GO:0097063
term: cadmium ion sensor activity
ontology: MF
definition:
Interacting selectively and non-covalently with and responding, e.g. by conformational change, to changes in the cellular level of cadmium (Cd++).


go_id: GO:0097065
term: anterior head development
ontology: BP
definition:
The process whose specific outcome is the progression of the anterior part of the head over time, from its formation to the mature structure.


go_id: GO:0097066
term: response to thyroid hormone
ontology: BP
definition:
A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus.


go_id: GO:0097067
term: cellular response to thyroid hormone stimulus
ontology: BP
definition:
A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroid hormone stimulus.


go_id: GO:0097068
term: response to thyroxine
ontology: BP
definition:
A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroxine stimulus.


go_id: GO:0097069
term: cellular response to thyroxine stimulus
ontology: BP
definition:
A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroxine stimulus.


go_id: GO:0097070
term: ductus arteriosus closure
ontology: BP
definition:
The morphogenesis process in which the ductus arteriosus changes to no longer permit blood flow after birth. The ductus arteriosus is the shunt between the aorta and the pulmonary artery which allows blood to bypass the fetus' lungs.


go_id: GO:0097071
term: interferon regulatory factor complex
ontology: CC
definition:
A protein complex that consists of two interferon regulatory proteins (IRFs); may be homodimeric or heterodimeric. The activation of a latent closed conformation of IRF in the cytoplasm is triggered by phosphorylation of Ser/Thr residues in a C-terminal region. Phosphorylation stimulates the C-terminal autoinhibitory domain to attain a highly extended conformation triggering dimerization through extensive contacts to a second subunit.


go_id: GO:0097072
term: interferon regulatory factor 3 complex
ontology: CC
definition:
An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 3.


go_id: GO:0097073
term: interferon regulatory factor 5 complex
ontology: CC
definition:
An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 5.


go_id: GO:0097074
term: interferon regulatory factor 7 complex
ontology: CC
definition:
An interferon regulatory factor complex that consists of a homodimer of interferon regulatory factor 7.


go_id: GO:0097075
term: interferon regulatory factor 3-interferon regulatory factor 7 complex
ontology: CC
definition:
An interferon regulatory factor complex that consists of a heterodimer of interferon regulatory factor 3 and interferon regulatory factor 7.


go_id: GO:0097076
term: transforming growth factor beta activated kinase 1 complex
ontology: CC
definition:
A protein complex that possesses protein kinase activity and activates the I-kappa B kinase complex (IKK) and mitogen-activated protein (MAP) kinases in response to TRAF6 signaling. It comprises the catalytic subunit TAK1 complexed to the regulatory subunits, termed TABs (TAK1-binding subunits).


go_id: GO:0097077
term: copper ion sensor activity
ontology: MF
definition:
Interacting selectively and non-covalently with and responding, e.g. by conformational change, to changes in the cellular level of copper(I) (Cu+).


go_id: GO:0097078
term: FAL1-SGD1 complex
ontology: CC
definition:
A protein complex involved in the 18S rRNA biogenesis. In S. cerevisiae this complex consists of Fal1p and Sgd1p and in humans this complex consists of NOM1 and eIF4AIII subunits.


go_id: GO:0097079
term: selenite:proton symporter activity
ontology: MF
definition:
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: selenite(out) + H+(out) = selenite(in) + H+(in).


go_id: GO:0097081
term: vascular smooth muscle cell fate commitment
ontology: BP
definition:
The commitment of cells to a vascular smooth muscle cell fate and their capacity to differentiate into vascular smooth muscle cells. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.


go_id: GO:0097082
term: vascular smooth muscle cell fate specification
ontology: BP
definition:
The process in which a cell becomes capable of differentiating autonomously into a vascular smooth muscle cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.


go_id: GO:0097083
term: vascular smooth muscle cell fate determination
ontology: BP
definition:
The process in which a cell becomes capable of differentiating autonomously into a vascular smooth muscle cell regardless of its environment; upon determination, the cell fate cannot be reversed. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.


go_id: GO:0097084
term: vascular smooth muscle cell development
ontology: BP
definition:
The process aimed at the progression of a vascular smooth muscle cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.


go_id: GO:0097085
term: interferon regulatory factor 3-interferon regulatory factor 5 complex
ontology: CC
definition:
An interferon regulatory factor complex that consists of a heterodimer of interferon regulatory factor 3 and interferon regulatory factor 5.


go_id: GO:0097086
term: amniotic stem cell differentiation
ontology: BP
definition:
The process whereby a relatively unspecialized cell acquires specialized features of an amniotic stem cell. An amniotic stem cell is a mesenchymal stem cell extracted from amniotic fluid. Amniotic stem cells are able to differentiate into various tissue types such as skin, cartilage, cardiac tissue, nerves, muscle, and bone.


go_id: GO:0097087
term: interleukin-17A production
ontology: BP
definition:
The appearance of interleukin-17A due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


go_id: GO:0097088
term: interleukin-17F production
ontology: BP
definition:
The appearance of interleukin-17F due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


go_id: GO:0097089
term: methyl-branched fatty acid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving methyl-branched fatty acids, aliphatic monocarboxylic acids with methyl branches on the main chain.


go_id: GO:0097090
term: presynaptic membrane organization
ontology: BP
definition:
A process which results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.


go_id: GO:0097091
term: synaptic vesicle clustering
ontology: BP
definition:
The process that results in grouping synaptic vesicles, prior to release, at a specialized patch of the presynaptic membrane referred to as the active zone.


go_id: GO:0097092
term: polyacyltrehalose metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving polyacyltrehalose, a pentaacylated, trehalose-based glycolipid.


go_id: GO:0097093
term: polyacyltrehalose biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of polyacyltrehalose, a pentaacylated, trehalose-based glycolipid.


go_id: GO:0097095
term: frontonasal suture morphogenesis
ontology: BP
definition:
The process in which the frontonasal suture, between frontal and nasal bones, is generated and organized.


go_id: GO:0097098
term: DNA/RNA hybrid annealing activity
ontology: MF
definition:
Facilitates the base-pairing of single-stranded RNA to double-stranded DNA resulting in the formation of R-loops.


go_id: GO:0097099
term: structural constituent of albumen
ontology: MF
definition:
The action of a molecule that contributes to the structural integrity of albumen (also called egg white). Albumen is the clear liquid contained within an egg and consists of water and proteins, among which are ovomucin and ovomucoid. It protects the egg yolk and provides additional nutrition for the growth of the embryo.


go_id: GO:0097100
term: supercoiled DNA binding
ontology: MF
definition:
Interacting selectively and non-covalently with supercoiled DNA. For example, during replication and transcription, template DNA is negatively supercoiled in the receding downstream DNA and positively supercoiled in the approaching downstream DNA.


go_id: GO:0097101
term: blood vessel endothelial cell fate specification
ontology: BP
definition:
The process involved in the specification of identity of a blood vessel endothelial cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. A blood vessel endothelial cell is an endothelial cell of the vascular tree, which includes blood vessels and lymphatic vessels.


go_id: GO:0097102
term: endothelial tip cell fate specification
ontology: BP
definition:
The process involved in the specification of identity of an endothelial tip cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. An endothelial tip cell is a specialized endothelial cell localized to the leading edge of an angiogenic sprout that senses extracellular signals and guides the directed growth of blood vessels.


go_id: GO:0097103
term: endothelial stalk cell fate specification
ontology: BP
definition:
The process involved in the specification of identity of an endothelial stalk cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. An endothelial stalk cell is a specialized endothelial cell which follows behind the tip cell of an angiogenic sprout.


go_id: GO:0097104
term: postsynaptic membrane assembly
ontology: BP
definition:
The aggregation, arrangement and bonding together of a set of components to form a postsynaptic membrane, a specialized area of membrane facing the presynaptic membrane on the tip of the nerve ending and separated from it by a minute cleft (the synaptic cleft).


go_id: GO:0097105
term: presynaptic membrane assembly
ontology: BP
definition:
The aggregation, arrangement and bonding together of a set of components to form a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a  specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.


go_id: GO:0097106
term: postsynaptic density organization
ontology: BP
definition:
A process that results in the assembly, arrangement of constituent parts, or disassembly of a postsynaptic density, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse.


go_id: GO:0097107
term: postsynaptic density assembly
ontology: BP
definition:
The aggregation, arrangement and bonding together of a set of components to form a postsynaptic density, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane at excitatory synapse.


go_id: GO:0097108
term: hedgehog family protein binding
ontology: MF
definition:
Interacting selectively and non-covalently with a member of the hedgehog protein family, signaling proteins involved in development.


go_id: GO:0097109
term: neuroligin family protein binding
ontology: MF
definition:
Interacting selectively and non-covalently with a member of the neuroligin protein family, neuronal cell surface proteins that mediate synapse formation.


go_id: GO:0097110
term: scaffold protein binding
ontology: MF
definition:
Interacting selectively and non-covalently with a scaffold protein. Scaffold proteins are crucial regulators of many key signaling pathways. Although not strictly defined in function, they are known to interact and/or bind with multiple members of a signaling pathway, tethering them into complexes.


go_id: GO:0097111
term: endoplasmic reticulum-Golgi intermediate compartment organization
ontology: BP
definition:
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum (ER)-Golgi intermediate compartment.


go_id: GO:0097112
term: gamma-aminobutyric acid receptor clustering
ontology: BP
definition:
The receptor clustering process in which gamma-aminobutyric acid (GABA) receptors are localized to distinct domains in the cell membrane.


go_id: GO:0097113
term: AMPA glutamate receptor clustering
ontology: BP
definition:
The glutamate receptor clustering process in which alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate (AMPA) receptors are localized to distinct domains in the cell membrane.


go_id: GO:0097114
term: NMDA glutamate receptor clustering
ontology: BP
definition:
The receptor clustering process in which N-methyl-D-aspartate (NMDA) receptors are localized to distinct domains in the cell membrane.


go_id: GO:0097115
term: neurexin clustering involved in presynaptic membrane assembly
ontology: BP
definition:
The receptor clustering process involved in assembly of the presynaptic membrane in which neurexins are localized to distinct domains in the cell membrane. Neurexins are synaptic cell surface proteins which act as cell recognition molecules at nerve terminals.


go_id: GO:0097116
term: gephyrin clustering involved in postsynaptic density assembly
ontology: BP
definition:
The clustering process in which gephyrin molecules are localized to distinct domains in the postsynaptic density as part of postsynaptic density assembly. Gephyrin is a component of the postsynaptic protein network of inhibitory synapses.


go_id: GO:0097117
term: guanylate kinase-associated protein clustering
ontology: BP
definition:
The clustering process in which guanylate kinase-associated proteins (GKAPs) are localized to distinct domains in the cell membrane. GKAP facilitates assembly of the post synaptic density of neurons.


go_id: GO:0097118
term: neuroligin clustering involved in postsynaptic membrane assembly
ontology: BP
definition:
The receptor clustering process involved in assembly of the postsynaptic membrane in which neuroligins are localized to distinct domains in the cell membrane. Neuroligins are neuronal cell surface proteins on the postsynaptic membrane that mediate synapse formation between neurons.


go_id: GO:0097119
term: postsynaptic density protein 95 clustering
ontology: BP
definition:
The clustering process in which postsynaptic density protein 95 (PSD-95) molecules are localized to distinct domains in the cell membrane. PSD-95 is mostly located in the post synaptic density of neurons, and is involved in anchoring synaptic proteins.


go_id: GO:0097120
term: receptor localization to synapse
ontology: BP
definition:
Any process in which a receptor is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.


go_id: GO:0097121
term: cyclin A1-CDK1 complex
ontology: CC
definition:
A protein complex consisting of cyclin A1 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097122
term: cyclin A2-CDK1 complex
ontology: CC
definition:
A protein complex consisting of cyclin A2 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097123
term: cyclin A1-CDK2 complex
ontology: CC
definition:
A protein complex consisting of cyclin A1 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097124
term: cyclin A2-CDK2 complex
ontology: CC
definition:
A protein complex consisting of cyclin A2 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097125
term: cyclin B1-CDK1 complex
ontology: CC
definition:
A protein complex consisting of cyclin B1 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097126
term: cyclin B2-CDK1 complex
ontology: CC
definition:
A protein complex consisting of cyclin B2 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097127
term: cyclin B3-CDK2 complex
ontology: CC
definition:
A protein complex consisting of cyclin B3 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097128
term: cyclin D1-CDK4 complex
ontology: CC
definition:
A protein complex consisting of cyclin D1 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097129
term: cyclin D2-CDK4 complex
ontology: CC
definition:
A protein complex consisting of cyclin D2 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097130
term: cyclin D3-CDK4 complex
ontology: CC
definition:
A protein complex consisting of cyclin D3 and cyclin-dependent kinase 4 (CDK4). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097131
term: cyclin D1-CDK6 complex
ontology: CC
definition:
A protein complex consisting of cyclin D1 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097132
term: cyclin D2-CDK6 complex
ontology: CC
definition:
A protein complex consisting of cyclin D2 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097133
term: cyclin D3-CDK6 complex
ontology: CC
definition:
A protein complex consisting of cyclin D3 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097134
term: cyclin E1-CDK2 complex
ontology: CC
definition:
A protein complex consisting of cyclin E1 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097135
term: cyclin E2-CDK2 complex
ontology: CC
definition:
A protein complex consisting of cyclin E2 and cyclin-dependent kinase 2 (CDK2). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.


go_id: GO:0097136
term: Bcl-2 family protein complex
ontology: CC
definition:
A protein complex that consists of members of the Bcl-2 family of anti- and proapoptotic regulators. Bcl-2 proteins respond to cues from various forms of intracellular stress, such as DNA damage or cytokine deprivation, and interact with opposing family members to determine whether or not the caspase proteolytic cascade should be unleashed.


go_id: GO:0097137
term: BAD-BCL-xl complex
ontology: CC
definition:
A heterodimeric protein complex consisting of BAD and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.


go_id: GO:0097138
term: BAD-BCL-2 complex
ontology: CC
definition:
A heterodimeric protein complex consisting of BAD and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.


go_id: GO:0097139
term: BID-BCL-2 complex
ontology: CC
definition:
A heterodimeric protein complex consisting of BID and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.


go_id: GO:0097140
term: BIM-BCL-xl complex
ontology: CC
definition:
A heterodimeric protein complex consisting of BIM and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.


go_id: GO:0097141
term: BIM-BCL-2 complex
ontology: CC
definition:
A heterodimeric protein complex consisting of BIM and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.


go_id: GO:0097142
term: PUMA-BCL-2 complex
ontology: CC
definition:
A heterodimeric protein complex consisting of PUMA and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.


go_id: GO:0097143
term: PUMA-BCL-xl complex
ontology: CC
definition:
A heterodimeric protein complex consisting of PUMA and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.


go_id: GO:0097144
term: BAX complex
ontology: CC
definition:
An oligomeric protein complex consisting of BAX, a member of the Bcl-2 family of anti- and proapoptotic regulators.


go_id: GO:0097145
term: BAK complex
ontology: CC
definition:
An oligomeric protein complex consisting of BAK, a member of the Bcl-2 family of anti- and proapoptotic regulators.


go_id: GO:0097146
term: NOXA-BCL-xl complex
ontology: CC
definition:
A heterodimeric protein complex consisting of NOXA and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.


go_id: GO:0097147
term: NOXA-BCL-2 complex
ontology: CC
definition:
A heterodimeric protein complex consisting of NOXA and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.


go_id: GO:0097148
term: BCL-2 complex
ontology: CC
definition:
A homodimeric protein complex consisting of BCL-2, a member of the Bcl-2 family of anti- and proapoptotic regulators.


go_id: GO:0097149
term: centralspindlin complex
ontology: CC
definition:
A heterotetrameric protein complex playing a key role in the formation of the central spindle in mitosis. Made up of two molecules each of a mitotic kinesin (ZEN-4 in Caenorhabditis elegans or MKLP1 in mammals) and of two molecules each of a GTPase activating protein (GAP) factor (CYK-4 in Caenorhabditis elegans or MgcRacGAP in mammals).


go_id: GO:0097151
term: positive regulation of inhibitory postsynaptic potential
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of inhibitory postsynaptic potential (IPSP). IPSP is a temporary decrease in postsynaptic membrane potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential.


go_id: GO:0097152
term: mesenchymal cell apoptotic process
ontology: BP
definition:
Any apoptotic process in a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.


go_id: GO:0097153
term: cysteine-type endopeptidase activity involved in apoptotic process
ontology: MF
definition:
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile, and contributing to the apoptotic process.


go_id: GO:0097154
term: GABAergic neuron differentiation
ontology: BP
definition:
The process in which a neuroblast acquires the specialized structural and functional features of a GABAergic neuron.


go_id: GO:0097157
term: pre-mRNA intronic binding
ontology: MF
definition:
Interacting selectively and non-covalently with an intronic sequence of a pre-messenger RNA (pre-mRNA).


go_id: GO:0097158
term: pre-mRNA intronic pyrimidine-rich binding
ontology: MF
definition:
Interacting selectively and non-covalently with a pyrimidine-rich (CU-rich) intronic sequence of a pre-messenger RNA (pre-mRNA).


go_id: GO:0097159
term: organic cyclic compound binding
ontology: MF
definition:
Interacting selectively and non-covalently with an organic cyclic compound, any molecular entity that contains carbon arranged in a cyclic molecular structure.


go_id: GO:0097160
term: polychlorinated biphenyl binding
ontology: MF
definition:
Interacting selectively and non-covalently with a polychlorinated biphenyl (PCB), a biphenyl compound containing between 2 and 10 chlorine atoms attached to the two benzene rings.


go_id: GO:0097161
term: DH domain binding
ontology: MF
definition:
Interacting selectively and non-covalently with a DH (Dbl homology) domain of a protein. The DH domain contains three structurally conserved regions separated by more variable regions. It is composed of 11 alpha helices that are folded into a flattened, elongated alpha-helix bundle in which two of the three conserved regions, conserved region 1 (CR1) and conserved region 3 (CR3), are exposed near the centre of one surface. CR1 and CR3, together with a part of alpha-6 and the DH/PH (pleckstrin homology) junction site, constitute the Rho GTPase interacting pocket.


go_id: GO:0097162
term: MADS box domain binding
ontology: MF
definition:
Interacting selectively and non-covalently with a MADS box domain, a protein domain that encodes the DNA-binding MADS domain. The MADS domain binds to DNA sequences of high similarity to the motif CC[A/T]6GG termed the CArG-box. MADS-domain proteins are generally transcription factors. The length of the MADS-box is in the range of 168 to 180 base pairs.


go_id: GO:0097165
term: nuclear stress granule
ontology: CC
definition:
A dense aggregation in the nucleus composed of proteins and RNAs that appear when the cell is under stress.


go_id: GO:0097166
term: lens epithelial cell proliferation
ontology: BP
definition:
The multiplication or reproduction of lens epithelial cells, resulting in the expansion of a cell population. Lens epithelial cells make up the lens epithelium, which is located in the anterior portion of the lens between the lens capsule and the lens fibers and is a simple cuboidal epithelium. The epithelial cells of the lens regulate most of the homeostatic functions of the lens such as osmolarity and liquid volume. The lens epithelial cells also serve as the progenitors for new lens fibers. The lens epithelium constantly lays down fibers in the embryo, fetus, infant, and adult, and continues to lay down fibers for lifelong growth.


go_id: GO:0097167
term: circadian regulation of translation
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of mRNA translation with a regularity of approximately 24 hours.


go_id: GO:0097168
term: mesenchymal stem cell proliferation
ontology: BP
definition:
The multiplication or reproduction of mesenchymal stem cells, resulting in the expansion of a stem cell population. A mesenchymal stem cell, or MSC, is a cell that retains the ability to divide and proliferate throughout life to provide progenitor cells that can differentiate into specialized mesenchymal cells.


go_id: GO:0097169
term: AIM2 inflammasome complex
ontology: CC
definition:
A protein complex that consists of AIM2, ASC, and caspase-1. AIM2 is a member of the HN-200 protein family that appears to be the sensor of cytosolic double-stranded DNA.


go_id: GO:0097170
term: ADP-L-glycero-beta-D-manno-heptose metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving ADP-L-glycero-beta-D-manno-heptose, an ADP-L-glycero-D-manno-heptose having beta-configuration at the anomeric centre of the heptose. ADP-L-glycero-beta-D-manno-heptose (also called ADP-L-beta-D-heptose or ADP-L-glycero-D-manno-heptose) is a nucleotide-sugar precursor of the inner core lipopolysaccharide (LPS) from D-glycero-beta-D-manno-heptose 7-phosphate.


go_id: GO:0097171
term: ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of ADP-L-glycero-beta-D-manno-heptose, an ADP-L-glycero-D-manno-heptose having beta-configuration at the anomeric centre of the heptose. ADP-L-glycero-beta-D-manno-heptose (also called ADP-L-beta-D-heptose or ADP-L-glycero-D-manno-heptose) is a nucleotide-sugar precursor of the inner core lipopolysaccharide (LPS) from D-glycero-beta-D-manno-heptose 7-phosphate.


go_id: GO:0097172
term: N-acetylmuramic acid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving N-acetylmuramic acid (MurNAc), a monosaccharide derivative of N-acetylglucosamine.


go_id: GO:0097173
term: N-acetylmuramic acid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of N-acetylmuramic acid (MurNAc), a monosaccharide derivative of N-acetylglucosamine.


go_id: GO:0097174
term: 1,6-anhydro-N-acetyl-beta-muramic acid metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving 1,6-anhydro-N-acetyl-beta-muramic acid, the 1,6-anhydro-derivative of N-acetyl-beta-muramic acid.


go_id: GO:0097175
term: 1,6-anhydro-N-acetyl-beta-muramic acid catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of 1,6-anhydro-N-acetylmuramic acid, the 1,6-anhydro-derivative of N-acetyl-beta-muramic acid.


go_id: GO:0097176
term: epoxide metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving epoxides, compounds in which an oxygen atom is directly attached to two adjacent or non-adjacent carbon atoms of a carbon chain or ring system; thus cyclic ethers.


go_id: GO:0097177
term: mitochondrial ribosome binding
ontology: MF
definition:
Interacting selectively and non-covalently with any part of a mitochondrial ribosome, a ribosome found in the mitochondrion of a eukaryotic cell.


go_id: GO:0097178
term: ruffle assembly
ontology: BP
definition:
The aggregation, arrangement and bonding together of a set of components to form a ruffle, a projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork. The formation of ruffles (also called membrane ruffling) is thought to be controlled by a group of enzymes known as Rho GTPases, specifically RhoA, Rac1 and cdc42.


go_id: GO:0097179
term: protease inhibitor complex
ontology: CC
definition:
A heterodimeric protein complex that contains a protease inhibitor and a protease; formation of the complex inhibits protease activity.


go_id: GO:0097180
term: serine protease inhibitor complex
ontology: CC
definition:
A heterodimeric protein complex that contains a serine protease inhibitor and a protease; formation of the complex inhibits serine protease activity.


go_id: GO:0097181
term: protein C inhibitor-coagulation factor V complex
ontology: CC
definition:
A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and coagulation factor V (F5); formation of the complex inhibits the serine protease activity of coagulation factor V.


go_id: GO:0097182
term: protein C inhibitor-coagulation factor Xa complex
ontology: CC
definition:
A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and coagulation factor Xa (F10); formation of the complex inhibits the serine protease activity of coagulation factor Xa.


go_id: GO:0097183
term: protein C inhibitor-coagulation factor XI complex
ontology: CC
definition:
A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and coagulation factor XI (F11); formation of the complex inhibits the serine protease activity of coagulation factor XI.


go_id: GO:0097184
term: response to azide
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an azide stimulus.


go_id: GO:0097185
term: cellular response to azide
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an azide stimulus.


go_id: GO:0097186
term: amelogenesis
ontology: BP
definition:
The process whose specific outcome is the formation of tooth enamel, occurring in two stages: secretory stage and maturation stage.


go_id: GO:0097187
term: dentinogenesis
ontology: BP
definition:
The process whose specific outcome is the formation of dentin, the mineralized tissue that constitutes the major bulk of teeth. Dentin may be one of three types: primary dentin, secondary dentin, and tertiary dentin.


go_id: GO:0097188
term: dentin mineralization
ontology: BP
definition:
The process in which calcium salts are deposited into the calcareous tooth structure known as dentin.


go_id: GO:0097189
term: apoptotic body
ontology: CC
definition:
A fragment containing parts of a dying cell. Apoptotic bodies can be formed during the execution phase of the apoptotic process, when the cell's cytoskeleton breaks up and causes the membrane to bulge outward. These bulges may separate from the cell, taking a portion of cytoplasm with them, to become apoptotic bodies. These are then engulfed by phagocytic cells, and their components recycled. Apoptotic bodies may range in size from 0.8 to 5um.


go_id: GO:0097190
term: apoptotic signaling pathway
ontology: BP
definition:
A series of molecular signals which triggers the apoptotic death of a cell. The pathway starts with reception of a signal, and ends when the execution phase of apoptosis is triggered.


go_id: GO:0097191
term: extrinsic apoptotic signaling pathway
ontology: BP
definition:
A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with either a ligand binding to a cell surface receptor, or a ligand being withdrawn from a cell surface receptor (e.g. in the case of signaling by dependence receptors), and ends when the execution phase of apoptosis is triggered.


go_id: GO:0097192
term: extrinsic apoptotic signaling pathway in absence of ligand
ontology: BP
definition:
A series of molecular signals in which a signal is conveyed from the cell surface to trigger the apoptotic death of a cell. The pathway starts with withdrawal of a ligand from a cell surface receptor, and ends when the execution phase of apoptosis is triggered.


go_id: GO:0097193
term: intrinsic apoptotic signaling pathway
ontology: BP
definition:
A series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway starts with reception of an intracellular signal (e.g. DNA damage, endoplasmic reticulum stress, oxidative stress etc.), and ends when the execution phase of apoptosis is triggered. The intrinsic apoptotic signaling pathway is crucially regulated by permeabilization of the mitochondrial outer membrane (MOMP).


go_id: GO:0097194
term: execution phase of apoptosis
ontology: BP
definition:
A stage of the apoptotic process that starts with the controlled breakdown of the cell through the action of effector caspases or other effector molecules (e.g. cathepsins, calpains etc.). Key steps of the execution phase are rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.


go_id: GO:0097195
term: pilomotor reflex
ontology: BP
definition:
The reflex process in which the arrectores pilorum (hair follicle) muscles contract and cause the hair to stand erect.


go_id: GO:0097196
term: Shu complex
ontology: CC
definition:
A protein complex involved in error-free DNA post-replication repair (PRR). In Saccharomyces cerevisiae the complex contains Csm2p, Psy3p, Shu1p, and Shu2p.


go_id: GO:0097197
term: tetraspanin-enriched microdomain
ontology: CC
definition:
A pre-organized unit composed either of adhesion molecules (mainly integrins and members of the Ig superfamily), signaling receptors and/or enzyme-enriched plasma membrane domains that compartmentalizes cellular processes. Tetraspanin-enriched microdomains might be specially suited for the regulation of avidity of adhesion receptors and the compartmentalization of enzymatic activities.


go_id: GO:0097198
term: histone H3-K36 trimethylation
ontology: BP
definition:
The modification of histone H3 by addition of three methyl groups to lysine at position 36 of the histone.


go_id: GO:0097199
term: cysteine-type endopeptidase activity involved in apoptotic signaling pathway
ontology: MF
definition:
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile, and contributing to the apoptotic signaling pathway.


go_id: GO:0097201
term: negative regulation of transcription from RNA polymerase II promoter in response to stress
ontology: BP
definition:
Any process that decreases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).


go_id: GO:0097203
term: phagocytic cup lip
ontology: CC
definition:
The tip or margin of the progressing circular lamella that engulfs a particle during phagocytosis. When the two lips of the cup fuse it is converted into a phagosome.


go_id: GO:0097204
term: phagocytic cup base
ontology: CC
definition:
The older part of the phagocytic cup where the actin cytoskeleton disassembles, allowing early incoming and outgoing vesicular trafficking.


go_id: GO:0097205
term: renal filtration
ontology: BP
definition:
A renal system process in which fluid circulating through the body is filtered through a barrier system.


go_id: GO:0097206
term: nephrocyte filtration
ontology: BP
definition:
The process by which hemolymph is filtered based on size and charge through a nephrocyte filtration barrier formed by the basement membrane and nephrocyte diaphragm.


go_id: GO:0097207
term: bud dormancy process
ontology: BP
definition:
A dormancy process in which dormancy (sometimes called a dormant state) is induced, maintained or broken in a bud. Bud dormancy is a suspension of most physiological activity and growth that can be reactivated. It may be a response to environmental conditions such as seasonality or extreme heat, drought, or cold. The exit from bud dormancy is marked by the resumed growth of the bud.


go_id: GO:0097208
term: alveolar lamellar body
ontology: CC
definition:
A specialized secretory organelle found in type II pneumocytes and involved in the synthesis, secretion, and reutilization of pulmonary surfactant.


go_id: GO:0097209
term: epidermal lamellar body
ontology: CC
definition:
A specialized secretory organelle found in keratinocytes and involved in the formation of an impermeable, lipid-containing membrane that serves as a water barrier and is required for correct skin barrier function.


go_id: GO:0097210
term: response to gonadotropin-releasing hormone
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gonadotropin-releasing hormone stimulus. Gonadotropin-releasing hormone (GnRH) is a peptide hormone responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary. GnRH is synthesized and released by the hypothalamus.


go_id: GO:0097211
term: cellular response to gonadotropin-releasing hormone
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gonadotropin-releasing hormone stimulus. Gonadotropin-releasing hormone (GnRH) is a peptide hormone responsible for the release of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) from the anterior pituitary. GnRH is synthesized and released by the hypothalamus.


go_id: GO:0097212
term: lysosomal membrane organization
ontology: BP
definition:
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lysosomal membrane. A lysosomal membrane is the lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.


go_id: GO:0097213
term: regulation of lysosomal membrane permeability
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.


go_id: GO:0097214
term: positive regulation of lysosomal membrane permeability
ontology: BP
definition:
Any process that increases the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.


go_id: GO:0097215
term: negative regulation of lysosomal membrane permeability
ontology: BP
definition:
Any process that decreases the frequency, rate or extent of the passage or uptake of molecules by the lysosomal membrane.


go_id: GO:0097216
term: guanosine tetraphosphate binding
ontology: MF
definition:
Interacting selectively and non-covalently with guanosine tetraphosphate (5'-ppGpp-3'), a guanosine bisphosphate having diphosphate groups at both the 3' and 5'-positions.


go_id: GO:0097217
term: sieve area
ontology: CC
definition:
A pit-like area in the cell wall of a sieve element; contains pores lined with callose and occupied by strands of protoplasmic material that interconnect the protoplasts of contiguous sieve elements.


go_id: GO:0097218
term: sieve plate
ontology: CC
definition:
A part of the cell wall of a sieve tube member that bears one or more highly specialized sieve areas.


go_id: GO:0097219
term: compound sieve plate
ontology: CC
definition:
A sieve plate that contains several specialized sieve areas in either a scalariform or reticulate arrangement.


go_id: GO:0097221
term: M/G1 phase-specific MADS box-forkhead transcription factor complex
ontology: CC
definition:
A protein complex that contains a MADS-box protein and two forkhead domain proteins, and binds to and regulates transcription from promoters of genes transcribed during the M/G1 transition of the cell cycle. In Schizosaccharomyces pombe, the complex contains the MADS-box protein Mbx1 and two forkhead proteins, Sep1 and Fkh2.


go_id: GO:0097222
term: mitochondrial mRNA polyadenylation
ontology: BP
definition:
The enzymatic addition of a sequence of 40-60 adenylyl residues at the 3' end of a eukaryotic mitochondrial mRNA primary transcript. Mitochondria contain both stabilizing and destabilizing poly(A) tails.


go_id: GO:0097224
term: sperm connecting piece
ontology: CC
definition:
The segment of the sperm flagellum that attaches to the implantation fossa of the nucleus in the sperm head; from the remnant of the centriole at this point, the axoneme extends throughout the length of the flagellum.


go_id: GO:0097225
term: sperm midpiece
ontology: CC
definition:
The highly organized segment of the sperm flagellum which begins at the connecting piece and is characterized by the presence of 9 outer dense fibers (ODFs) that lie outside each of the 9 outer axonemal microtubule doublets and by a sheath of mitochondria that encloses the ODFs and the axoneme; the midpiece terminates about one-fourth of the way down the sperm flagellum at the annulus, which marks the beginning of the principal piece.


go_id: GO:0097226
term: sperm mitochondrial sheath
ontology: CC
definition:
The tightly packed helical sheath of ATP-producing mitochondria restricted to the midpiece of the sperm flagellum.


go_id: GO:0097227
term: sperm annulus
ontology: CC
definition:
The ring-like, filamentous structure located at the distal end of the midpiece of the sperm flagellum; the annulus is thought to form a diffusion barrier between the midpiece and the principal piece and serve as a stabilizing structure for tail rigidity.


go_id: GO:0097228
term: sperm principal piece
ontology: CC
definition:
The segment of the sperm flagellum where the mitochondrial sheath ends, and the outer dense fibers (ODFs) associated with outer axonemal doublets 3 and 8 are replaced by the 2 longitudinal columns of the fibrous sheath (FS) which run the length of the principal piece and are stabilized by circumferential ribs. The principal piece makes up ~2/3 of the length of the sperm flagellum and is defined by the presence of the FS and of only 7 (rather than 9) ODFs which taper and then terminate near the distal end of the principal piece.


go_id: GO:0097229
term: sperm end piece
ontology: CC
definition:
The short tip of the sperm flagellum, adjacent to the sperm principal piece and furthest from the sperm head, which contains only the axoneme surrounded by the plasma membrane.


go_id: GO:0097230
term: cell motility in response to potassium ion
ontology: BP
definition:
Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a potassium ion stimulus.


go_id: GO:0097231
term: cell motility in response to calcium ion
ontology: BP
definition:
Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a calcium ion stimulus.


go_id: GO:0097232
term: lamellar body membrane
ontology: CC
definition:
The lipid bilayer surrounding a lamellar body. A lamellar body is a membrane-bounded organelle, specialized for the storage and secretion of various substances (surfactant phospholipids, glycoproteins and acid phosphates) which are arranged in the form of tightly packed, concentric, membrane sheets or lamellae. Has some similar properties to, but is distinct from, a lysosome.


go_id: GO:0097233
term: alveolar lamellar body membrane
ontology: CC
definition:
The lipid bilayer surrounding an alveolar lamellar body, a specialized secretory organelle found in type II pneumocytes and involved in the synthesis, secretion, and reutilization of pulmonary surfactant.


go_id: GO:0097234
term: epidermal lamellar body membrane
ontology: CC
definition:
The lipid bilayer surrounding an epidermal lamellar body, a specialized secretory organelle found in keratinocytes and involved in the formation of an impermeable, lipid-containing membrane that serves as a water barrier and is required for correct skin barrier function.


go_id: GO:0097235
ontology: BP
term:
positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter

definition:
Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:0097236
ontology: BP
term:
positive regulation of transcription from RNA polymerase II promoter in response to zinc ion starvation

definition:
Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of deprivation of zinc ions.


go_id: GO:0097237
term: cellular response to toxic substance
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a toxic stimulus.


go_id: GO:0097238
term: cellular response to methylglyoxal
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a methylglyoxal stimulus. Methylglyoxal is a 2-oxoaldehyde derived from propanal.


go_id: GO:0097239
term: positive regulation of transcription from RNA polymerase II promoter in response to methylglyoxal
ontology: BP
definition:
Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter in response to a methylglyoxal stimulus.


go_id: GO:0097241
term: hematopoietic stem cell migration to bone marrow
ontology: BP
definition:
The orderly movement of a hematopoietic stem cell into the bone marrow, and its subsequent positioning within defined functional compartments in that microenvironment. A hematopoietic stem cell is a cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.


go_id: GO:0097243
term: flavonoid binding
ontology: MF
definition:
Interacting selectively and non-covalently with a flavonoid, a compound containing two or more aromatic rings, each bearing at least one aromatic hydroxyl and connected with a carbon bridge.


go_id: GO:0097244
term: flavonol binding
ontology: MF
definition:
Interacting selectively and non-covalently with a flavonol, a flavonoid that contains a 3-hydroxy-2-phenylchromen-4-one backbone.


go_id: GO:0097246
term: catechin binding
ontology: MF
definition:
Interacting selectively and non-covalently with a catechin, a polyphenolic antioxidant plant metabolite with a flavonoid or flavan-3-ol structure.


go_id: GO:0097247
term: epigallocatechin 3-gallate binding
ontology: MF
definition:
Interacting selectively and non-covalently with epigallocatechin 3-gallate, a compound that is a gallic acid ester of a catechin.


go_id: GO:0097248
term: maintenance of protein location in cell cortex of cell tip
ontology: BP
definition:
A process in which a protein or protein complex is maintained in a specific location in the cell cortex of a cell tip, and is prevented from moving elsewhere. The cell cortex of a cell tip is the region directly beneath the plasma membrane at either end of the longest axis of a cylindrical or elongated cell.


go_id: GO:0097249
term: mitochondrial respiratory chain supercomplex
ontology: CC
definition:
A set of respiratory enzyme complexes of the mitochondrial inner membrane (including, for example, Complex II, Complex III, Complex IV, or F1-F0 ATPase) arranged to form a large supercomplex.


go_id: GO:0097250
term: mitochondrial respiratory chain supercomplex assembly
ontology: BP
definition:
The aggregation, arrangement and bonding together of a set of respiratory enzyme complexes of the mitochondrial inner membrane (including, for example, Complex II, Complex III, Complex IV, or F1-F0 ATPase) to form a large supercomplex.


go_id: GO:0097251
term: leukotriene B4 biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of leukotriene B4, a leukotriene composed of (6Z,8E,10E,14Z)-eicosatetraenoic acid having (5S)- and (12R)-hydroxy substituents.


go_id: GO:0097252
term: oligodendrocyte apoptotic process
ontology: BP
definition:
Any apoptotic process in an oligodendrocyte. Oligodendrocytes belong to a class of large neuroglial (macroglial) cells in the central nervous system, where they form the insulating myelin sheath of axons.


go_id: GO:0097253
term: beta-hydroxybutyrate transmembrane transporter activity
ontology: MF
definition:
Enables the transfer of beta-hydroxybutyrate from one side of the membrane to the other. Beta-hydroxybutyrate is the conjugate base of (R)-3-hydroxybutyric acid.


go_id: GO:0097254
term: renal tubular secretion
ontology: BP
definition:
Secretion of substances from peritubular capillaries into the renal tubules to be incorporated subsequently into the urine. Substances that are secreted include organic anions, ammonia, potassium and drugs.


go_id: GO:0097255
term: R2TP complex
ontology: CC
definition:
A highly conserved protein complex comprised of two ATP-dependent DNA helicases (Rvb1p and Rvb2p in yeast, Pontin52 and Reptin52 in humans), Pih1p in yeast or PIH1D1 in humans, and Tah1 in yeast or RPAP3 in humans. The complex associates with Hsp90 and is thought to have a role in assembly of large protein or protein/nucleic acid complexes. In this role it is involved in multiple processes such as box C/D snoRNP biogenesis, phosphatidylinositol-3 kinase-related protein kinase (PIKK) signaling, RNA polymerase II assembly, and others.


go_id: GO:0097258
term: 20-hydroxy-leukotriene B4 omega oxidase activity
ontology: MF
definition:
Catalysis of the reaction: 20-hydroxy-leukotriene B4 + O2 + NADPH + H(+) = 20-aldehyde-leukotriene B4 + 2H2O + NADP(+).


go_id: GO:0097259
term: 20-aldehyde-leukotriene B4 20-monooxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 20-aldehyde-leukotriene B4 + O2 + NADPH + H(+) = 20-carboxy-leukotriene B4 + H2O + NADP(+).


go_id: GO:0097264
term: self proteolysis
ontology: BP
definition:
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their own peptide bonds.


go_id: GO:0097266
term: phenylacetyl-CoA 1,2-epoxidase activity
ontology: MF
definition:
Catalysis of the reaction: phenylacetyl-CoA + H(+) + NADPH + O2 = 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA + H2O + NADP(+).


go_id: GO:0097267
term: omega-hydroxylase P450 pathway
ontology: BP
definition:
The chemical reactions and pathways by which arachidonic acid is converted to other compounds initially by omega-hydroxylation.


go_id: GO:0097268
term: cytoophidium
ontology: CC
definition:
A subcellular filamentary structure where CTP synthase is compartmentalized in a range of organisms including bacteria, yeast, fruit fly, rat and human.


go_id: GO:0097269
term: all-trans-decaprenyl-diphosphate synthase activity
ontology: MF
definition:
Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate + 7 isopentenyl diphosphate = 7 diphosphate + all-trans-decaprenyl diphosphate.


go_id: GO:0097271
term: protein localization to bud neck
ontology: BP
definition:
A process in which a protein is transported to, or maintained at, a location within a cellular bud neck.


go_id: GO:0097275
term: cellular ammonia homeostasis
ontology: BP
definition:
Any biological process involved in the maintenance of an internal steady state of ammonia at the level of the cell.


go_id: GO:0097276
term: cellular creatinine homeostasis
ontology: BP
definition:
Any biological process involved in the maintenance of an internal steady state of creatinine at the level of the cell.


go_id: GO:0097277
term: cellular urea homeostasis
ontology: BP
definition:
Any biological process involved in the maintenance of an internal steady state of urea at the level of the cell.


go_id: GO:0097278
term: complement-dependent cytotoxicity
ontology: BP
definition:
Lysis of a cell resulting from triggering of the complement cascade. An example can be seen with complement activation and subsequent lysis of a bacterial cell as a result of the binding of IgM to the cell surface followed by the binding of complement proteins to that antibody.


go_id: GO:0097279
term: histamine secretion mediated by IgE immunoglobulin
ontology: BP
definition:
Histamine release triggered by the binding of an antigen to an IgE immunoglobulin bound to the cell surface. An example is mast cell histamine degranulation as a result of exposure of mast cell-bound IgE to alder tree pollen.


go_id: GO:0097280
term: histamine secretion mediated by immunoglobulin
ontology: BP
definition:
Histamine release triggered by the binding of an antigen to an immunoglobulin bound to the cell surface.


go_id: GO:0097281
term: immune complex formation
ontology: BP
definition:
The process that gives rise to an immune complex. Immune complexes are clusters of antibodies bound to antigen, to which complement may also be fixed, and which may precipitate or remain in solution. Examples are the clumping of cells such as bacteria or red blood cells in the presence of an antibody, precipitation of a toxin after an antibody binds to it, and clumping of viral particles as a result of antibody binding to the virus.


go_id: GO:0097282
term: immunoglobulin-mediated neutralization
ontology: BP
definition:
The inhibition of an antigen's biological effects by antibody binding to it. An example is neutralization of diphtheria toxin by preventing its entry into human cells via the binding of antibody specific for diphtheria toxin.


go_id: GO:0097283
term: keratinocyte apoptotic process
ontology: BP
definition:
Any apoptotic process in a keratinocyte. A keratinocyte is an epidermal cell which synthesizes keratin and undergoes a characteristic change as it moves upward from the basal layers of the epidermis to the cornified (horny) layer of the skin.


go_id: GO:0097287
term: 7-cyano-7-deazaguanine metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.


go_id: GO:0097288
term: 7-cyano-7-deazaguanine biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of the Q nucleoside precursor 7-cyano-7-deazaguanine, also known as 2-amino-4-oxo-4,7-dihydro-3H-pyrrolo[2,3-d]pyrimidine-5-carbonitrile or preQo.


go_id: GO:0097289
term: alpha-ribazole metabolic process
ontology: BP
definition:
The chemical reactions and pathways involving alpha-ribazole, the benzimidazole nucleoside in adenosyl cobalamin (vitamin B12).


go_id: GO:0097290
term: alpha-ribazole biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of alpha-ribazole, the benzimidazole nucleoside in adenosyl cobalamin (vitamin B12).


go_id: GO:0097291
term: renal phosphate ion absorption
ontology: BP
definition:
A renal system process in which phosphate ions are taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.


go_id: GO:0097294
term: 'de novo' XMP biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of XMP, xanthosine monophosphate, from simpler precursors.


go_id: GO:0097295
term: morphine biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of morphine, 17-methyl-7,8-didehydro-4,5alpha-epoxymorphinan-3,6alpha-diol. Morphine is a highly potent opiate analgesic psychoactive drug obtained form the opium poppy, Papaver somniferum.


go_id: GO:0097296
term: activation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway
ontology: BP
definition:
Any process that initiates the activity of an inactive cysteine-type endopeptidase involved in the apoptotic signaling pathway.


go_id: GO:0097297
term: activation of cysteine-type endopeptidase activity involved in execution phase of apoptosis
ontology: BP
definition:
Any process that initiates the activity of an inactive cysteine-type endopeptidase involved in the execution phase of apoptosis.


go_id: GO:0097299
term: cysteine-type endopeptidase activity involved in plant-type hypersensitive response
ontology: MF
definition:
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile, and contributing to plant-type hypersensitive response, the rapid, localized death of plant cells in response to invasion by a pathogen.


go_id: GO:0097300
term: programmed necrotic cell death
ontology: BP
definition:
A necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.


go_id: GO:0097301
ontology: BP
term:
regulation of potassium ion concentration by positive regulation of transcription from RNA polymerase II promoter

definition:
Any process that regulates the internal concentration of potassium ions at the level of a cell by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:0097302
term: lipoprotein biosynthetic process via diacylglyceryl transfer
ontology: BP
definition:
The chemical reactions and pathways by which diacylglyceryl transfer leads to formation of a water-soluble protein-lipid complex.


go_id: GO:0097303
term: lipoprotein biosynthetic process via N-acyl transfer
ontology: BP
definition:
The chemical reactions and pathways by which N-acyl transfer leads to formation of a water-soluble protein-lipid complex.


go_id: GO:0097304
term: lipoprotein biosynthetic process via signal peptide cleavage
ontology: BP
definition:
The chemical reactions and pathways by which signal peptide cleavage leads to formation of a water-soluble protein-lipid complex.


go_id: GO:0097305
term: response to alcohol
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alcohol stimulus.


go_id: GO:0097306
term: cellular response to alcohol
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alcohol stimulus.


go_id: GO:0097307
term: response to farnesol
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a farnesol stimulus.


go_id: GO:0097308
term: cellular response to farnesol
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a farnesol stimulus.


go_id: GO:0097311
term: biofilm matrix
ontology: CC
definition:
A structure lying external to bacterial cells. A biofilm is an aggregate of surface-associated bacteria, and the biofilm matrix is the envelope of polymeric substances that surrounds the bacteria.


go_id: GO:0097312
term: biofilm matrix component
ontology: CC
definition:
Any constituent part of the biofilm matrix, a structure lying external to bacterial cells. A biofilm is an aggregate of surface-associated bacteria, and the biofilm matrix is the envelope of polymeric substances that surrounds the bacteria.


go_id: GO:0097313
term: biofilm matrix surface
ontology: CC
definition:
The external part of the biofilm matrix, a structure lying external to bacterial cells. A biofilm is an aggregate of surface-associated bacteria, and the biofilm matrix is the envelope of polymeric substances that surrounds the bacteria.


go_id: GO:0097314
term: apoptosome assembly
ontology: BP
definition:
The aggregation, arrangement and bonding together of the apoptosome, a multisubunit protein complex involved in the signaling phase of the apoptotic process.


go_id: GO:0097315
term: response to N-acetyl-D-glucosamine
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an N-acetyl-D-glucosamine stimulus.


go_id: GO:0097316
term: cellular response to N-acetyl-D-glucosamine
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an N-acetyl-D-glucosamine stimulus.


go_id: GO:0097317
term: invasive growth in response to biotic stimulus
ontology: BP
definition:
The growth of colonies in filamentous chains of cells as a result of a biotic stimulus. An example of this is Candida albicans forming invasive filaments in agar medium in response to a serum stimulus.


go_id: GO:0097318
term: invasive growth in response to abiotic stimulus
ontology: BP
definition:
The growth of colonies in filamentous chains of cells as a result of a abiotic stimulus. An example of this process is found in Candida albicans.


go_id: GO:0097319
term: carbohydrate import into cell
ontology: BP
definition:
The directed movement of carbohydrate from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.


go_id: GO:0097321
term: cell growth mode switching, filamentous to budding
ontology: BP
definition:
The process in which a cell switches from growing as a filament (elongated cells attached end-to-end) to growing as a round budding cell. An example of this is observed in Candida albicans.


go_id: GO:0097324
term: melanocyte migration
ontology: BP
definition:
The orderly movement of melanocytes from one site to another, often during the development of a multicellular organism. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.


go_id: GO:0097325
term: melanocyte proliferation
ontology: BP
definition:
The multiplication or reproduction of melanocytes, resulting in the expansion of a cell population. A melanocyte is a pigment cell derived from the neural crest. It contains melanin-filled pigment granules, which give a brown to black appearance.


go_id: GO:0097327
term: response to antineoplastic agent
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antineoplastic agent stimulus. An antineoplastic agent is a substance that inhibits or prevents the proliferation of neoplasms.


go_id: GO:0097328
term: response to carboplatin
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carboplatin stimulus.


go_id: GO:0097329
term: response to antimetabolite
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antimetabolite stimulus. An antimetabolite is a substance which is structurally similar to a metabolite but which competes with it or replaces it, and so prevents or reduces its normal utilization.


go_id: GO:0097330
term: response to 5-fluoro-2'-deoxyuridine
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 5-fluoro-2'-deoxyuridine stimulus. 5-fluoro-2'-deoxyuridine is a pyrimidine 2'-deoxyribonucleoside compound having 5-fluorouracil as the nucleobase; it is used to treat hepatic metastases of gastrointestinal adenocarcinomas and for palliation in malignant neoplasms of the liver and gastrointestinal tract.


go_id: GO:0097331
term: response to cytarabine
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cytarabine stimulus.


go_id: GO:0097332
term: response to antipsychotic drug
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antipsychotic drug stimulus. Antipsychotic drugs are agents that control agitated psychotic behaviour, alleviate acute psychotic states, reduce psychotic symptoms, and exert a quieting effect.


go_id: GO:0097333
term: response to olanzapine
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an olanzapine stimulus.


go_id: GO:0097334
term: response to perphenazine
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a perphenazine stimulus. Perphenazine is a phenothiazine derivative having a chloro substituent at the 2-position and a 3-[4-(2-hydroxyethyl)piperazin-1-yl]propyl group at the N-10 position.


go_id: GO:0097335
term: response to quetiapine
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a quetiapine stimulus.


go_id: GO:0097336
term: response to risperidone
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a risperidone stimulus.


go_id: GO:0097337
term: response to ziprasidone
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ziprasidone stimulus. Ziprasidone is a piperazine compound having 1,2-benzothiazol-3-yl- and 2-(6-chloro-1,3-dihydro-2-oxindol-5-yl)ethyl substituents attached to the nitrogen atoms.


go_id: GO:0097338
term: response to clozapine
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a clozapine stimulus.


go_id: GO:0097339
term: glycolate transmembrane transport
ontology: BP
definition:
A process in which glycolate is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. Glycolate is the anion of hydroxyethanoic acid (glycolic acid).


go_id: GO:0097342
term: ripoptosome
ontology: CC
definition:
A protein complex whose core components are the receptor-interacting serine/threonine-protein kinases RIPK1 and RIPK3 (also called RIP1 and RIP3). Formation of the ripoptosome can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.


go_id: GO:0097343
term: ripoptosome assembly
ontology: BP
definition:
The aggregation, arrangement and bonding together of a set of components to form a ripoptosome, a protein complex whose formation can induce an extrinsic apoptotic signaling pathway or a necroptotic signaling pathway. The composition of this protein complex may depend on several factors including nature of the signal, cell type and more.


go_id: GO:0097344
term: Rix1 complex
ontology: CC
definition:
A protein complex that comprises Rix1p, Ipi1p and Ipi3p, and is required for processing of ITS2 sequences from 35S pre-rRNA. The Rix1 complex has been identified in budding yeast and fission yeast, and members of this complex are conserved in higher eukaryotes.


go_id: GO:0097345
term: mitochondrial outer membrane permeabilization
ontology: BP
definition:
The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of the apoptotic signaling pathway.


go_id: GO:0097346
term: INO80-type complex
ontology: CC
definition:
A chromatin remodeling protein complex initially purified from S. cerevisiae and containing more than 10 subunits, including the SWR1-related complexes. INO80 (inositol requiring 80)-type complexes have diverse functions, including promoting transcriptional activation and DNA repair.


go_id: GO:0097347
term: TAM protein secretion complex
ontology: CC
definition:
A heterooligomeric protein complex that spans the bacterial periplasm and enables the secretion of adhesin proteins in Gram-negative bacteria. In Citrobacter rodentium, Salmonella enterica and Escherichia coli, the TAM complex consists of an Omp85-family protein, TamA, in the outer membrane and TamB in the inner membrane.


go_id: GO:0097351
term: toxin-antitoxin pair type II binding
ontology: MF
definition:
Interacting selectively and non-covalently with a toxic protein, disabling its function. There may be more than one antitoxin to a toxic protein. Instances of this activity are known only in prokaryotes, where the toxic protein may be a ribonuclease, a DNA gyrase, or other.


go_id: GO:0097352
term: autophagosome maturation
ontology: BP
definition:
The process in which autophagosomes, double-membraned vacuoles containing cytoplasmic material fuse with a vacuole (yeast) or lysosome (e.g. mammals and insects). In the case of yeast, inner membrane-bounded structures (autophagic bodies) appear in the vacuole. Fusion provides an acidic environment and digestive function to the interior of the autophagosome.


go_id: GO:0097353
term: centrolateral pattern formation
ontology: BP
definition:
The regionalization process in which the areas along the centrolateral axis are established that will lead to differences in cell differentiation, or in which cells interpret a specific environment.


go_id: GO:0097354
term: prenylation
ontology: BP
definition:
The covalent attachment of a prenyl group to a molecule; geranyl, farnesyl, or geranylgeranyl groups may be added.


go_id: GO:0097355
term: protein localization to heterochromatin
ontology: BP
definition:
Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into heterochromatin.


go_id: GO:0097356
term: perinucleolar compartment
ontology: CC
definition:
The perinucleolar compartment (PNC) is a subnuclear structure associated with, but structurally distinct from, the nucleolus. The PNC contains large amounts of the heterogeneous nuclear ribonucleoprotein complex (hnRNP) called hnRNP 1 (PTB). Many RNA binding proteins as well as RNA polymerase III transcripts are highly enriched in this compartment. PTB and pol III transcripts are required for the integrity of the PNC.


go_id: GO:0097357
term: myo-inositol import into cell
ontology: BP
definition:
The directed movement of myo-inositol from outside of a cell into the intracellular region of a cell.


go_id: GO:0097358
term: D-leucyl-tRNA(Leu) deacylase activity
ontology: MF
definition:
Catalysis of the reaction: D-leucyl-tRNA(Leu) = D-leucine + tRNA(Leu). Hydrolysis of the removal of D-leucine from residues in charged tRNA(Leu).


go_id: GO:0097360
term: chorionic trophoblast cell proliferation
ontology: BP
definition:
The multiplication or reproduction of chorionic trophoblast cells, resulting in the expansion of their population.


go_id: GO:0097361
term: CIA complex
ontology: CC
definition:
The cytosolic iron-sulfur protein assembly (CIA) complex mediates the incorporation of iron-sulfur clusters into apoproteins involved in DNA metabolism and genomic integrity.


go_id: GO:0097362
term: MCM8-MCM9 complex
ontology: CC
definition:
A hexameric protein complex composed of MCM8 and MCM9 and involved in homologous recombination repair following DNA interstrand cross-links.


go_id: GO:0097363
term: protein O-GlcNAc transferase activity
ontology: MF
definition:
Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + [protein]-L-serine = UDP + [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine, or UDP-N-acetyl-D-glucosamine + [protein]-L-threonine = UDP + [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-threonine.


go_id: GO:0097364
ontology: MF
term:
stretch-activated, cation-selective, calcium channel activity involved in regulation of action potential

definition:
Enables the transmembrane transfer of a calcium ion by a channel that opens in response to a mechanical stress in the form of stretching, and contributing to the regulation of action potential.


go_id: GO:0097365
ontology: MF
term:
stretch-activated, cation-selective, calcium channel activity involved in regulation of cardiac muscle cell action potential

definition:
Enables the transmembrane transfer of a calcium ion by a channel that opens in response to a mechanical stress in the form of stretching, and contributing to the regulation of action potential in a cardiac muscle cell.


go_id: GO:0097366
term: response to bronchodilator
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bronchodilator stimulus. A bronchodilator is a chemical that causes an increase in the expansion of a bronchus or bronchial tubes.


go_id: GO:0097368
term: establishment of Sertoli cell barrier
ontology: BP
definition:
Establishment of a structure near the basement membrane in adjacent Sertoli cells of the seminiferous epithelium for maintaining spermatogenesis. The structure consists of tight junctions, basal ectoplasmic specializations, and desmosome-like junctions.


go_id: GO:0097370
term: protein O-GlcNAcylation via threonine
ontology: BP
definition:
The glycosylation of a protein by addition of N-acetylglucosamine via the O3 atom of peptidyl-threonine, forming O3-N-acetylglucosamine-L-threonine.


go_id: GO:0097372
term: NAD-dependent histone deacetylase activity (H3-K18 specific)
ontology: MF
definition:
Catalysis of the reaction: histone H3 N6-acetyl-L-lysine (position 18) + H2O = histone H3 L-lysine (position 18) + acetate. This reaction requires the presence of NAD, and represents the removal of an acetyl group from lysine at position 18 of the histone H3 protein.


go_id: GO:0097373
term: MCM core complex
ontology: CC
definition:
A protein complex that contains Mcm4, Mcm6, and Mcm7 proteins, and possesses DNA helicase activity. In the heterohexameric MCM complex, the Mcm4/6/7 proteins form a stable core, and Mcm2, Mcm3, and Mcm5 are more peripherally associated.


go_id: GO:0097374
term: sensory neuron axon guidance
ontology: BP
definition:
The process in which the migration of an axon growth cone of a sensory neuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A sensory neuron is an afferent neuron conveying sensory impulses.


go_id: GO:0097375
term: spinal sensory neuron axon guidance
ontology: BP
definition:
The process in which the migration of an axon growth cone of a spinal sensory neuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A spinal sensory neuron is a sensory neuron that project to the spinal cord.


go_id: GO:0097376
term: interneuron axon guidance
ontology: BP
definition:
The process in which the migration of an axon growth cone of an interneuron is directed to a specific target site in response to a combination of attractive and repulsive cues. An interneuron is any neuron which is not motor or sensory. Interneurons may also refer to neurons whose axons remain within a particular brain region, as contrasted with projection neurons which have axons projecting to other brain regions.


go_id: GO:0097377
term: spinal cord interneuron axon guidance
ontology: BP
definition:
The process in which the migration of an axon growth cone of a spinal cord interneuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A spinal cord interneuron is a CNS interneuron located in the spinal cord.


go_id: GO:0097378
term: dorsal spinal cord interneuron axon guidance
ontology: BP
definition:
The process in which the migration of an axon growth cone of a dorsal spinal cord interneuron is directed to a specific target site in response to a combination of attractive and repulsive cues. A dorsal spinal cord interneuron is an interneuron located in the dorsal part of the spinal cord.


go_id: GO:0097379
term: dorsal spinal cord interneuron posterior axon guidance
ontology: BP
definition:
The process in which the migration of an axon growth cone of a dorsal spinal cord interneuron is directed to a specific target site in the posterior direction along the anterior-posterior body axis in response to a combination of attractive and repulsive cues. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.


go_id: GO:0097380
term: dorsal spinal cord interneuron anterior axon guidance
ontology: BP
definition:
The process in which the migration of an axon growth cone of a dorsal spinal cord interneuron is directed to a specific target site in the anterior direction along the anterior-posterior body axis in response to a combination of attractive and repulsive cues. The anterior-posterior axis is defined by a line that runs from the head or mouth of an organism to the tail or opposite end of the organism.


go_id: GO:0097381
term: photoreceptor disc membrane
ontology: CC
definition:
Ovally-shaped membranous stack located inside the photoreceptor outer segment, and containing densely packed molecules of the photoreceptor protein rhodopsin that traverse the lipid bilayer. Disc membranes are apparently derived from the plasma membrane in the region of the cilium that connects the photoreceptor outer segment to the inner segment.


go_id: GO:0097384
term: cellular lipid biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of lipids, as carried out by individual cells.


go_id: GO:0097385
term: programmed necrotic cell death in response to starvation
ontology: BP
definition:
A programmed necrotic cell death occurring as a result of a starvation stimulus (deprivation of nourishment).


go_id: GO:0097387
term: capitate projection
ontology: CC
definition:
Simple or compound process of epithelial glial cells with a spherical head that inserts into photoreceptor axons. Capitate projections have only been observed in Brachycera (flies).


go_id: GO:0097388
term: chemokine (C-C motif) ligand 19 production
ontology: BP
definition:
The appearance of chemokine (C-C motif) ligand 19 (CCL19) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


go_id: GO:0097389
term: chemokine (C-C motif) ligand 21 production
ontology: BP
definition:
The appearance of chemokine (C-C motif) ligand 21 (CCL21) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


go_id: GO:0097390
term: chemokine (C-X-C motif) ligand 12 production
ontology: BP
definition:
The appearance of chemokine (C-X-C motif) ligand 12 (CXCL12) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


go_id: GO:0097391
term: chemokine (C-X-C motif) ligand 13 production
ontology: BP
definition:
The appearance of chemokine (C-X-C motif) ligand 13 (CXCL13) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


go_id: GO:0097392
term: chemokine (C-X-C motif) ligand 16 production
ontology: BP
definition:
The appearance of chemokine (C-X-C motif) ligand 16 (CXCL16) due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.


go_id: GO:0097393
term: telomeric RNA transcription
ontology: BP
definition:
The synthesis of telomeric RNA from a DNA template. A telomere is a complex of DNA and proteins that seals the end of a chromosome.


go_id: GO:0097394
term: telomeric RNA transcription from RNA pol II promoter
ontology: BP
definition:
The synthesis of telomeric RNA from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II promoter.


go_id: GO:0097395
term: response to interleukin-32
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-32 stimulus.


go_id: GO:0097396
term: response to interleukin-17
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-17 stimulus.


go_id: GO:0097397
term: cellular response to interleukin-32
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-32 stimulus.


go_id: GO:0097398
term: cellular response to interleukin-17
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-17 stimulus.


go_id: GO:0097399
term: interleukin-32-mediated signaling pathway
ontology: BP
definition:
A series of molecular signals initiated by the binding of interleukin-32 to a receptor on the surface of a cell, and ending with regulation of a downstream cellular process, e.g. transcription.


go_id: GO:0097400
term: interleukin-17-mediated signaling pathway
ontology: BP
definition:
A series of molecular signals initiated by the binding of interleukin-17 to a receptor on the surface of a cell, and ending with regulation of a downstream cellular process, e.g. transcription.


go_id: GO:0097401
term: synaptic vesicle lumen acidification
ontology: BP
definition:
Any process that reduces the pH of the synaptic vesicle lumen, measured by the concentration of the hydrogen ion.


go_id: GO:0097402
term: neuroblast migration
ontology: BP
definition:
The orderly movement of a neuroblast from one site to another, often during the development of a multicellular organism or multicellular structure. A neuroblast is any cell that will divide and give rise to a neuron.


go_id: GO:0097403
term: cellular response to raffinose
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a raffinose stimulus.


go_id: GO:0097404
term: succinate import into cell
ontology: BP
definition:
The directed movement of succinate from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.


go_id: GO:0097406
term: malonic acid import into cell
ontology: BP
definition:
The directed movement of malonic acid from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.


go_id: GO:0097407
term: Bunina body
ontology: CC
definition:
Small granular inclusions (about 1-3 microns in diameter) found in the anterior horn cells, and appearing either singly or in a group. Sometimes they are arranged in small beaded chains. Bunina bodies express cystatin C and consist of electron-dense amorphous material that contains tubules or vesicular structures. The amorphous material frequently includes a cytoplasmic island containing neurofilaments and other micro-organelles.


go_id: GO:0097408
term: fibrillary inclusion
ontology: CC
definition:
Cellular inclusion consisting of circular areas filled with fine slender filaments about 10 nanometers in diameter, delimited by a wall of varying complexity (either a single continuous membrane or a tubular network consisting of a fine filamentous material giving the wall a honeycomb appearance). Fibrillary inclusions are found in the cytoplasm of giant cells of Dieters in the lateral vestibular nucleus of the rat; similar structures have been described in the ventral cochlear nucleus, spinal cord, and substantia nigra.


go_id: GO:0097409
term: glial cytoplasmic inclusion
ontology: CC
definition:
Non-membrane-bound cytoplasmic inclusions composed of 10-40 nm granule-coated fibrils. These inclusions have an abnormal accumulation of alpha-synuclein protein and are found in association with multiple system atrophy.


go_id: GO:0097410
term: hippocampal interneuron differentiation
ontology: BP
definition:
The process in which a relatively unspecialized cell acquires specialized features of a hippocampal interneuron.


go_id: GO:0097411
term: hypoxia-inducible factor-1alpha signaling pathway
ontology: BP
definition:
A series of molecular signals mediated by hypoxia-inducible factor (HIF1) in response to lowered oxygen levels (hypoxia). Under hypoxic conditions, the oxygen-sensitive alpha-subunit of hypoxia-inducible factor (HIF)-1 dimerizes with a HIF1-beta subunit (also called ARNT or aryl-hydrocarbon-receptor nuclear translocator), translocates to the nucleus and activates transcription of genes whose products participate in responding to hypoxia.


go_id: GO:0097413
term: Lewy body
ontology: CC
definition:
Cytoplasmic, spherical inclusion commonly found in damaged neurons, and composed of abnormally phosphorylated, neurofilament proteins aggregated with ubiquitin and alpha-synuclein.


go_id: GO:0097414
term: classical Lewy body
ontology: CC
definition:
Cytoplasmic inclusion, 5 to 15 micrometers in diameter, with a dense core surrounded by a halo of 10 to 20 nm wide radially oriented alpha-synuclein fibrils.


go_id: GO:0097416
term: Lewy body-like hyaline inclusion
ontology: CC
definition:
Cytoplasmic inclusion found in neurons. It consists of filaments and granular materials, exhibits a dense core with a rough peripheral halo and lacks a limiting membrane. The filaments of these inclusions are composed of approximately 15-25 nm granule-coated fibrils in association with normal 10-nm neurofilaments.


go_id: GO:0097417
term: nematosome
ontology: CC
definition:
Cytoplasmic, ball-like inclusion resembling a nucleolus and consisting of a convoluted network of electron-opaque strands embedded in a less dense matrix. It measures approximately 0.9 microns and lacks a limiting membrane. Its strands (diameter = 400-600 A) appear to be made of an entanglement of tightly packed filaments and particles approximately 25-50 A thick. Cytochemical studies suggest the presence of nonhistone proteins and some RNA. Usually only one such structure is present in a cell, and it appears to occur in most ganglion cells. Although they can be seen anywhere in the cell body, nematosomes are typically located in the perinuclear cytoplasm, where they are often associated with smooth-surfaced and coated vesicles.


go_id: GO:0097418
term: neurofibrillary tangle
ontology: CC
definition:
Intracellular mass of paired, helically wound protein filaments (also called PHF) lying in the cytoplasm of neuronal cell bodies and neuritic cell processes. Neurofibrillary tangles contain an abnormally phosphorylated form of a microtubule-associated protein, tau. The shape of these inclusions may resemble a flame or a star.


go_id: GO:0097419
term: Pick body
ontology: CC
definition:
Cellular inclusion composed of numerous tau fibrils arranged in a disorderly array. Tau protein is a major component, though Pick bodies also contain ubiquitin, alpha-synuclein, and apolipoprotein E.


go_id: GO:0097420
term: skein-like inclusion
ontology: CC
definition:
Intracytoplasmic filamentous structure frequently encountered in preparations immunostained for ubiquitin.


go_id: GO:0097423
term: mitochondrion-associated adherens complex
ontology: CC
definition:
An organelle arrangement comprised of the following elements: a mitochondrion positioned near the presynaptic membrane; an electron-dense mitochondrial plaque adjacent to the outer mitochondrial membrane that faces the presynaptic membrane; filament-like elements appearing to link the mitochondrial plaque to a cell-cell junction region (sometimes termed punctum adherens); tubular or vesicular-appearing membrane (also called vesicular chain) interposed among the filaments. Mitochondrion-associated adherens complexes were initially described in the dorsal horn of the spinal cord. They are found in calyces and other large terminals of the auditory brainstem, and in a variety of mammalian species including humans.


go_id: GO:0097424
term: nucleolus-associated heterochromatin
ontology: CC
definition:
Dense particles of heterochromatin, consisting of a loosely twisted strand about 600 Angstrom thick, found associated with the nucleolus.


go_id: GO:0097426
term: glial filament
ontology: CC
definition:
An intermediate filament composed of glial fibrillary acidic protein (GFAP) and found in astrocytes.


go_id: GO:0097428
term: protein maturation by iron-sulfur cluster transfer
ontology: BP
definition:
The transfer of an assembled iron-sulfur cluster from a scaffold protein to an acceptor protein that contributes to the attainment of the full functional capacity of a protein.


go_id: GO:0097429
term: amino acid ligation activity by nonribosomal peptide synthase
ontology: MF
definition:
Catalysis of the ligation of an amino acid to another amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate, carried out by a nonribosomal peptide synthase.


go_id: GO:0097431
term: mitotic spindle pole
ontology: CC
definition:
Either of the ends of a mitotic spindle, a spindle that forms as part of mitosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.


go_id: GO:0097432
term: hippocampal pyramidal neuron differentiation
ontology: BP
definition:
The process in which a relatively unspecialized cell acquires specialized features of a hippocampal pyramidal neuron, a pyramidal cell of the hippocampus.


go_id: GO:0097434
term: succinate:proton symporter activity
ontology: MF
definition:
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: succinate(out) + H+(out) = succinate(in) + H+(in).


go_id: GO:0097435
term: fibril organization
ontology: BP
definition:
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of fibrils, insoluble fibrous aggregates consisting of polysaccharides and/or proteins.


go_id: GO:0097436
term: entry into dormancy
ontology: BP
definition:
The dormancy process that results in entry into dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.


go_id: GO:0097437
term: maintenance of dormancy
ontology: BP
definition:
The dormancy process that results in an organism remaining in dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.


go_id: GO:0097438
term: exit from dormancy
ontology: BP
definition:
The dormancy process that results in exit from dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.


go_id: GO:0097439
term: acquisition of desiccation tolerance
ontology: BP
definition:
The process in which tolerance to severe drying is acquired, before entering into a dry, either dormant or quiescent state.


go_id: GO:0097440
term: apical dendrite
ontology: CC
definition:
A dendrite that emerges near the apical pole of a neuron. In bipolar neurons, apical dendrites are located on the opposite side of the soma from the axon.


go_id: GO:0097441
term: basilar dendrite
ontology: CC
definition:
A dendrite that emerges near the basal pole of a neuron. In bipolar neurons, basal dendrites are either on the same side of the soma as the axon, or project toward the axon.


go_id: GO:0097443
term: sorting endosome
ontology: CC
definition:
A multivesicular body surrounded by and connected with multiple tubular compartments with associated vesicles.


go_id: GO:0097444
term: spine apparatus
ontology: CC
definition:
A specialization of the endomembrane system found in some classes of neuron spines consisting of two or more closely apposed lamellae with interspersed electon dense material.  The endomembrane component is continuous with the smooth endoplasmic reticulum.


go_id: GO:0097445
term: presynaptic active zone dense projection
ontology: CC
definition:
Electron dense projection extending from the cytomatrix into the cytoplasm on which synaptic vesicles are tethered.


go_id: GO:0097446
term: protein localization to eisosome filament
ontology: BP
definition:
A process in which a protein is transported to, and/or maintained in, a specific location in a eisosome filament (also called linear eisosome), a filamentous cortical structure formed, in S. pombe, by the eisosome component Pil1.


go_id: GO:0097447
term: dendritic tree
ontology: CC
definition:
The entire complement of dendrites for a neuron, consisting of each primary dendrite and all its branches.


go_id: GO:0097448
term: spine mat
ontology: CC
definition:
A configuration of neuron spines found on ciliary ganglion neurons in the embryonic and adult brain consisting of patches of closely spaced spines lying flat against the soma.


go_id: GO:0097451
term: glial limiting end-foot
ontology: CC
definition:
Terminal process of astrocyte that extends to the surface of the central nervous system. Together, glial limiting end-feet form the glial limiting membrane or glia limitans.


go_id: GO:0097452
term: GAIT complex
ontology: CC
definition:
A protein complex which mediates interferon-gamma-induced transcript-selective translation inhibition in inflammation processes. The complex binds to stem loop-containing GAIT elements in the 3'-UTR of diverse inflammatory mRNAs and suppresses their translation by blocking the recruitment of the 43S ribosomal complex to m7G cap-bound eIF4G. In humans it includes RPL13A, EPRS, SYNCRIP and GAPDH; mouse complexes lack SYNCRIP.


go_id: GO:0097453
term: mesaxon
ontology: CC
definition:
Portion of the ensheathing process (either myelin or non-myelin) where the enveloping lips of the ensheathing cell come together so that their apposed plasma membranes run parallel to each other, separated by a cleft 12 nm wide.


go_id: GO:0097455
term: spiny bracelet of Nageotte
ontology: CC
definition:
Paranodal terminations of Schwann cells that do not directly contact the paranodal axon membrane. Usually found in thicker myelin.


go_id: GO:0097456
term: terminal loop
ontology: CC
definition:
Portion of myelin-forming Schwann cell consisting of terminal cytoplasmic extensions adhered to the axon at the beginning and end of the myelin sheath.


go_id: GO:0097457
term: hippocampal mossy fiber
ontology: CC
definition:
Axon of dentate gyrus granule cell projecting to hippocampal area CA3, characterized by expansions (mossy fiber expansions) giving the fibers a mossy appearance. These unmyelinated axons were first described by Ramon y Cajal.


go_id: GO:0097458
term: neuron part
ontology: CC
definition:
Any constituent part of a neuron, the basic cellular unit of nervous tissue. A typical neuron consists of a cell body (often called the soma), an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.


go_id: GO:0097459
term: iron ion import into cell
ontology: BP
definition:
The directed movement of iron ions from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.


go_id: GO:0097460
term: ferrous iron import into cell
ontology: BP
definition:
The directed movement of ferrous iron (Fe(II) or Fe2+) ions from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.


go_id: GO:0097461
term: ferric iron import into cell
ontology: BP
definition:
The directed movement of ferric iron (Fe(III) or Fe3+) ions from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.


go_id: GO:0097462
term: Lewy neurite
ontology: CC
definition:
Elongated neuronal process, often with side branches and more than one branching point, described in brains of patients with Parkinson's disease. Lewy neurites stain positively for ubiquitin in brainstem and forebrain regions affected in Parkinson's disease.


go_id: GO:0097464
term: thorny excrescence
ontology: CC
definition:
Large complex spine protruding from a dendrite. Each excrescence is formed by a cluster of spine heads.


go_id: GO:0097466
term: glycoprotein ERAD pathway
ontology: BP
definition:
An ERAD pathway whereby endoplasmic reticulum (ER)-resident glycoproteins are targeted for degradation. Includes differential processing of the glycoprotein sugar chains, retrotranslocation to the cytosol and degradation by the ubiquitin-proteasome pathway. A glycoprotein is a compound in which a carbohydrate component is covalently bound to a protein component.


go_id: GO:0097467
term: type III terminal bouton
ontology: CC
definition:
Terminal inflated portion of the axon of a non-glutamatergic neuron, containing the specialized apparatus necessary to release neurotransmitters at a regulatory synapse. The axon terminus is considered to be the whole region of thickening and the terminal bouton is a specialized region of it. Type III terminal boutons are larger than type II ones.


go_id: GO:0097468
term: programmed cell death in response to reactive oxygen species
ontology: BP
definition:
Cell death resulting from activation of endogenous cellular processes and occurring as a result of a reactive oxygen species stimulus. Reactive oxygen species include singlet oxygen, superoxide, and oxygen free radicals.


go_id: GO:0097470
term: ribbon synapse
ontology: CC
definition:
Type of synapse characterized by an electron-dense ribbon, lamella (bar) or spherical body in the presynaptic process cytoplasm.


go_id: GO:0097471
term: mossy fiber rosette
ontology: CC
definition:
A synapse of a mossy fiber onto the dendrite of a granule cell; each mossy fiber can have up to 50 rosettes.


go_id: GO:0097472
term: cyclin-dependent protein kinase activity
ontology: MF
definition:
Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. This reaction requires the binding of a regulatory cyclin subunit and full activity requires stimulatory phosphorylation by a CDK-activating kinase (CAK).


go_id: GO:0097473
term: retinal rod cell apoptotic process
ontology: BP
definition:
Any apoptotic process in a retinal rod cell, one of the two photoreceptor cell types of the vertebrate retina.


go_id: GO:0097474
term: retinal cone cell apoptotic process
ontology: BP
definition:
Any apoptotic process in a retinal cone cell, one of the two photoreceptor cell types of the vertebrate retina.


go_id: GO:0097475
term: motor neuron migration
ontology: BP
definition:
The orderly movement of a motor neuron from one site to another. A motor neuron is an efferent neuron that passes from the central nervous system or a ganglion toward or to a muscle and conducts an impulse that causes movement.


go_id: GO:0097476
term: spinal cord motor neuron migration
ontology: BP
definition:
The orderly movement of a spinal cord motor neuron from one site to another. A spinal cord motor neuron is a motor neuron that passes from the spinal cord toward or to a muscle and conducts an impulse that causes movement.


go_id: GO:0097477
term: lateral motor column neuron migration
ontology: BP
definition:
The orderly movement of a lateral motor column neuron from one site to another. A lateral motor column neuron is a motor neuron that is generated only on limb levels and send axons into the limb mesenchyme.


go_id: GO:0097479
term: synaptic vesicle localization
ontology: BP
definition:
Any process in which a synaptic vesicle or vesicles are transported to, and/or maintained in, a specific location.


go_id: GO:0097485
term: neuron projection guidance
ontology: BP
definition:
The process in which the migration of a neuron projection is directed to a specific target site in response to a combination of attractive and repulsive cues.


go_id: GO:0097490
term: sympathetic neuron projection extension
ontology: BP
definition:
Long distance growth of a single sympathetic neuron projection involved in cellular development. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.


go_id: GO:0097491
term: sympathetic neuron projection guidance
ontology: BP
definition:
The process in which the migration of a sympathetic neuron projection is directed to a specific target site in response to a combination of attractive and repulsive cues.


go_id: GO:0097492
term: sympathetic neuron axon guidance
ontology: BP
definition:
The chemotaxis process that directs the migration of a sympathetic neuron axon growth cone to a specific target site in response to a combination of attractive and repulsive cues.


go_id: GO:0097493
term: structural molecule activity conferring elasticity
ontology: MF
definition:
The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell, providing elasticity and recoiling.


go_id: GO:0097495
term: H-NS-Hha complex
ontology: CC
definition:
A trimeric protein complex made up of an H-NS homodimer and an Hha monomer. In Enterobacteriaceae, this complex negatively regulates transcription of a range of genes.


go_id: GO:0097496
term: blood vessel lumen ensheathment
ontology: BP
definition:
A blood vessel lumenization process that occurs by blood vessel endothelial cells delaminating and aligning along the inner surface of an existing luminal space, extending the open ended lumen, and joining to other blood vessels to form a complete blood vessel.


go_id: GO:0097497
term: blood vessel endothelial cell delamination
ontology: BP
definition:
The process of negative regulation of cell adhesion that results in blood vessel endothelial cells splitting off from an existing endothelial sheet.


go_id: GO:0097499
term: protein localization to nonmotile primary cilium
ontology: BP
definition:
A process in which a protein is transported to, or maintained in, a location within a nonmotile primary cilium.


go_id: GO:0097500
term: receptor localization to nonmotile primary cilium
ontology: BP
definition:
A process in which a receptor is transported to, or maintained in, a location within a nonmotile primary cilium.


go_id: GO:0097501
term: stress response to metal ion
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by a metal ion stimulus.


go_id: GO:0097504
term: Gemini of coiled bodies
ontology: CC
definition:
Nuclear bodies frequently found near or associated with Cajal bodies (also called coiled bodies or CBs). Gemini of coiled bodies, or 'gems', are similar in size and shape to CBs, and often indistinguishable under the microscope. Unlike CBs, gems do not contain small nuclear ribonucleoproteins (snRNPs); they contain a protein called survivor of motor neurons (SMN) whose function relates to snRNP biogenesis. Gems are believed to assist CBs in snRNP biogenesis, and to play a role in the etiology of spinal muscular atrophy (SMA).


go_id: GO:0097505
term: Rad6-Rad18 complex
ontology: CC
definition:
A ubiquitin ligase complex found to be involved in post-replicative bypass of UV-damaged DNA and UV mutagenesis. In S. cerevisiae, the complex contains the ubiquitin conjugating enzyme Rad6 and Rad18, a protein containing a RING finger motif and a nucleotide binding motif. The yeast Rad6-Rad18 heterodimer has ubiquitin conjugating activity, binds single-stranded DNA, and possesses single-stranded DNA-dependent ATPase activity.


go_id: GO:0097509
term: oxanine DNA N-glycosylase activity
ontology: MF
definition:
DNA N-glycosylase activity acting on deaminated guanine where the resulting base (oxanine) is generated by NO- or HNO2-induced nitrosative deamination.


go_id: GO:0097511
term: dendritic cell dendrite
ontology: CC
definition:
A branched cellular projection (or cytoplasmic extension) that is extended from the surface of a dendritic immune cell, and which enables the cell to sample luminal pathogens and increase the surface area for antigen presentation to T cells.


go_id: GO:0097514
term: sexual spore wall
ontology: CC
definition:
A specialized envelope lying outside the cell membrane of a spore derived from a product of meiosis.


go_id: GO:0097515
term: asexual spore wall
ontology: CC
definition:
A specialized envelope lying outside the cell membrane of a spore derived from an asexual process. Examples of this process are found in bacterial and fungal species.


go_id: GO:0097517
term: contractile actin filament bundle
ontology: CC
definition:
An actin filament bundle in which the filaments are loosely packed (approximately 30-60 nm apart) and arranged with opposing polarities; the loose packing allows myosin (usually myosin-II) to enter the bundle.


go_id: GO:0097518
term: parallel actin filament bundle
ontology: CC
definition:
An actin filament bundle in which the filaments are tightly packed (approximately 10-20 nm apart) and oriented with the same polarity.


go_id: GO:0097519
term: DNA recombinase complex
ontology: CC
definition:
A protein-DNA complex consisting of a higher-order oligomer of strand exchange proteins (recombinases) on single-stranded DNA.


go_id: GO:0097520
term: nucleotide-excision repair, preincision complex
ontology: CC
definition:
A multiprotein complex involved in damage recognition, DNA helix unwinding, and endonucleolytic cleavage at the site of DNA damage.


go_id: GO:0097522
term: protein-DNA ISRE complex
ontology: CC
definition:
A protein-DNA complex formed through interaction of the protein(s) with an interferon-stimulated response element (ISRE) in the DNA.


go_id: GO:0097525
term: spliceosomal snRNP complex
ontology: CC
definition:
A ribonucleoprotein complex involved in formation of the spliceosome and composed of one or more snRNA and multiple protein components.


go_id: GO:0097526
term: spliceosomal tri-snRNP complex
ontology: CC
definition:
A spliceosomal snRNP complex containing U4 and U6 (or U4atac and U6atac) snRNAs and U5 snRNAs and associated proteins.


go_id: GO:0097527
term: necroptotic signaling pathway
ontology: BP
definition:
A series of molecular signals which triggers the necroptotic death of a cell. The pathway starts with reception of a signal, is characterized by activation of receptor-interacting serine/threonine-protein kinase 1 and/or 3 (RIPK1/3, also called RIP1/3), and ends when the execution phase of necroptosis is triggered.


go_id: GO:0097528
term: execution phase of necroptosis
ontology: BP
definition:
A stage of the necroptotic process that starts after a necroptotic signal has been relayed to the execution machinery. Key steps of the execution phase are swelling of organelles, minor ultrastructural modifications of the nucleus (specifically, dilatation of the nuclear membrane and condensation of chromatin into small, irregular, circumscribed patches) and increased cell volume (oncosis), culminating in the disruption of the plasma membrane and subsequent loss of intracellular contents. The execution phase ends when the cell has died.


go_id: GO:0097532
term: stress response to acid chemical
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis caused by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.


go_id: GO:0097533
term: cellular stress response to acid chemical
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in cellular homeostasis caused by the chemical structure of the anion portion of a dissociated acid (rather than the acid acting as a proton donor). The acid chemical may be in gaseous, liquid or solid form.


go_id: GO:0097534
term: lymphoid lineage cell migration
ontology: BP
definition:
The orderly movement of a lymphoid lineage cell from one site to another. A lymphoid lineage cell, also called a lymphoid lineage restricted progenitor cell, is a progenitor cell restricted to the lymphoid lineage.


go_id: GO:0097535
term: lymphoid lineage cell migration into thymus
ontology: BP
definition:
The movement of a lymphoid lineage cell (also called a lymphoid lineage restricted progenitor cell) into the thymus. Lymphoid lineage cells enter and exit the thymus several times as part of this process.


go_id: GO:0097537
term: Y-shaped link
ontology: CC
definition:
A Y-shaped protein complex in the ciliary transition zone that connects the cilium axoneme to the ciliary necklace. Both protein sorting and protein gating occur at this point in the cilium allowing some, but not all proteins to enter the cilium.


go_id: GO:0097538
term: ciliary necklace
ontology: CC
definition:
A protein complex located on the cilium membrane in the ciliary transition zone; it is connected to the cilium axoneme via Y-shaped links.


go_id: GO:0097539
term: ciliary transition fiber
ontology: CC
definition:
A nine-bladed, propeller-like protein complex that links the distal end of the basal body and the cilium to the plasma membrane. Functions in protein sorting and gating (i.e. active and passive transport of proteins in and out of the cilium).


go_id: GO:0097540
term: axonemal central pair
ontology: CC
definition:
Part of the axoneme consisting of the inner two microtubule doublets of the 9+2 axoneme occurring in most motile cilia.


go_id: GO:0097541
term: axonemal basal plate
ontology: CC
definition:
Part of the axoneme consisting of a highly electron-dense region at the distal end of the ciliary transition zone within the axonemal lumen at which the axonemal central pair of microtubules is connected to the rest of the axonemal structure.


go_id: GO:0097542
term: ciliary tip
ontology: CC
definition:
Part of the cilium where the axoneme ends. The ciliary tip has been implicated in ciliary assembly and disassembly, as well as signal transduction.


go_id: GO:0097543
term: ciliary inversin compartment
ontology: CC
definition:
Proximal part of the ciliary shaft to which the inversin protein (also called Inv) specifically localizes. The inversin compartment appears to have a different protein composition than the rest of the cilium, although there is no structure that separates it form the distal part of the cilium.


go_id: GO:0097544
term: ciliary shaft
ontology: CC
definition:
The mid part of a cilium between the ciliary base and ciliary tip that extends into the extracellular space.


go_id: GO:0097545
term: axonemal outer doublet
ontology: CC
definition:
Part of an axoneme consisting in a doublet microtubule. Nine of these outer doublets form the 9+0 axoneme, while the 9+2 axoneme also contains a central pair. Dynein arms attached to the doublets provide the mechanism of movement of the cilium.


go_id: GO:0097546
term: ciliary base
ontology: CC
definition:
Area of the cilium (also called flagellum) where the basal body and the axoneme are anchored to the plasma membrane. The ciliary base encompasses the distal part of the basal body, transition fibers and transition zone and is structurally and functionally very distinct from the rest of the cilium. In this area proteins are sorted and filtered before entering the cilium, and many ciliary proteins localize specifically to this area.


go_id: GO:0097547
term: synaptic vesicle protein transport vesicle
ontology: CC
definition:
A cytoplasmic vesicle composed of both tubulovesicular and clear core vesicles that transport synaptic vesicle-associated proteins. Proteins carried by synaptic vesicle protein transport vesicles (STVs) include synaptophysin, synapsin Ia, synaptotagmin and synaptobrevin/vesicle-associated membrane protein 2 (VAMP2). STVs are packaged via the trans-Golgi network before being transported through the axon.


go_id: GO:0097549
term: chromatin organization involved in negative regulation of transcription
ontology: BP
definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of transcription by chromatin organization.


go_id: GO:0097550
term: transcriptional preinitiation complex
ontology: CC
definition:
A protein-DNA complex composed of proteins binding promoter DNA to form the transcriptional preinitiation complex (PIC), the formation of which is a prerequisite for transcription.


go_id: GO:0097551
term: mitochondrial double-strand break repair
ontology: BP
definition:
The repair of double-strand breaks in mitochondrial DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix.


go_id: GO:0097552
term: mitochondrial double-strand break repair via homologous recombination
ontology: BP
definition:
The repair of a double-strand break in mitochondrial DNA in which the broken DNA molecule is repaired using homologous sequences.


go_id: GO:0097553
term: calcium ion transmembrane import into cytosol
ontology: BP
definition:
A process in which a calcium ion is transported from one side of a membrane to the other into the cytosol by means of some agent such as a transporter or pore.


go_id: GO:0097554
term: left anterior flagellum
ontology: CC
definition:
A cilium (also called flagellum) found in Giardia species (trophozoite stage). It originates at the left anterior basal body, extends laterally through the cytoplasm, crosses the right anterior axoneme, and exits as a membrane-bound flagellum on the anterior left side of the cell.


go_id: GO:0097555
term: right anterior flagellum
ontology: CC
definition:
A cilium (also called flagellum) found in Giardia species (trophozoite stage). It originates at the right anterior basal body, extends laterally through the cytoplasm, crosses the left anterior axoneme, and exits as a membrane-bound flagellum on the anterior right side of the cell.


go_id: GO:0097556
term: left posteriolateral flagellum
ontology: CC
definition:
A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left posteriolateral basal body and extends cytoplasmically toward the cell posterior, marking the left anterior boundary of the lateral shield and the left lateral region of the funis before exiting at the left lateral region of the cell body.


go_id: GO:0097557
term: right posteriolateral flagellum
ontology: CC
definition:
A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the right posteriolateral basal body and extends cytoplasmically toward the cell posterior, marking the right anterior boundary of the lateral shield and the right lateral region of the funis before exiting at the right lateral region of the cell body.


go_id: GO:0097558
term: left ventral flagellum
ontology: CC
definition:
A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left ventral basal body and exits the cell body proximally and dorsal to the ventral disc.


go_id: GO:0097559
term: right ventral flagellum
ontology: CC
definition:
A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the right ventral basal body and exits the cell body proximally and dorsal to the ventral disc.


go_id: GO:0097560
term: left caudal flagellum
ontology: CC
definition:
A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left caudal basal body, extending cytoplasmically and exiting at the posterior end of the cell body.


go_id: GO:0097561
term: right caudal flagellum
ontology: CC
definition:
A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the right caudal basal body, extending cytoplasmically and exiting at the posterior end of the cell body.


go_id: GO:0097562
term: left lateral basal body pair
ontology: CC
definition:
Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the anterior and ventral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally.


go_id: GO:0097563
term: left middle basal body pair
ontology: CC
definition:
Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the caudal and posteriolateral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally.


go_id: GO:0097564
term: right lateral basal body pair
ontology: CC
definition:
Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the anterior and ventral basal bodies located to the left of the right nucleus of the trophozoite when viewed dorsally.


go_id: GO:0097565
term: right middle basal body pair
ontology: CC
definition:
Set of two basal bodies found in Giardia species (trophozoite stage). It comprises the caudal and posteriolateral basal bodies located to the left of the right nucleus of the trophozoite when viewed dorsally.


go_id: GO:0097566
term: left tetrad
ontology: CC
definition:
Set of four basal bodies found in Giardia species (trophozoite stage). It comprises the left lateral basal body pair and the left middle basal body pair (i.e. the anterior, ventral, caudal and posteriolateral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally).


go_id: GO:0097567
term: right tetrad
ontology: CC
definition:
Set of four basal bodies found in Giardia species (trophozoite stage). It comprises the right lateral basal body pair and the right middle basal body pair (i.e. the anterior, ventral, caudal and posteriolateral basal bodies located to the left of the right nucleus of the trophozoite when viewed dorsally).


go_id: GO:0097568
term: median body
ontology: CC
definition:
A non-membrane bound, semi-organized microtubule array of unknown function found in Giardia species (trophozoite stage). It is located on the dorsal side of the trophozoite, slightly posterior to the ventral disc.


go_id: GO:0097569
term: lateral shield
ontology: CC
definition:
Region of the ventral side of the cell body found in Giardia species (trophozoite stage). It is located posterior on either side of the ventral groove; the upper boundary is the ventral disc, and the lower boundary is marked by the posteriolateral flagella.


go_id: GO:0097570
term: cyst wall
ontology: CC
definition:
The specialized envelope lying outside the cell membrane of a cyst. A cyst is a resting or dormant stage of a microorganism, usually a bacterium or a protist or rarely an invertebrate animal, that helps the organism to survive in unfavorable environmental conditions. In protists such as protozoan parasites alternating cystic- and non-cystic stages, the cyst wall is usually composed of carbohydrates and proteins.


go_id: GO:0097571
term: left nucleus
ontology: CC
definition:
One of the two nuclei found in Giardia species (trophozoite stage). It is located on the left side of the cell when viewed from the dorsal side.


go_id: GO:0097572
term: right nucleus
ontology: CC
definition:
One of the two nuclei found in Giardia species (trophozoite stage). It is located on the right side of the cell when viewed from the dorsal side.


go_id: GO:0097573
term: glutathione oxidoreductase activity
ontology: MF
definition:
Catalysis of the reaction: protein-S-S-glutathione + glutathione-SH = protein-SH + glutathione-S-S-glutathione.


go_id: GO:0097574
term: lateral part of cell
ontology: CC
definition:
The region of a polarized cell other than its tips or ends (in some cell types, one end may be called the apex and the other the base). For example, in a polarized epithelial cell, the lateral part includes the cell sides which interface adjacent cells.


go_id: GO:0097576
term: vacuole fusion
ontology: BP
definition:
Merging of two or more vacuoles, or of vacuoles and vesicles within a cell to form a single larger vacuole.


go_id: GO:0097577
term: sequestering of iron ion
ontology: BP
definition:
The process of binding or confining iron ions such that they are separated from other components of a biological system.


go_id: GO:0097578
term: sequestering of copper ion
ontology: BP
definition:
The process of binding or confining copper ions such that they are separated from other components of a biological system.


go_id: GO:0097579
term: extracellular sequestering of copper ion
ontology: BP
definition:
The process of binding or confining copper ions in an extracellular area such that they are separated from other components of a biological system.


go_id: GO:0097580
term: intracellular sequestering of copper ion
ontology: BP
definition:
The process of binding or confining copper ions in an intracellular area such that they are separated from other components of a biological system.


go_id: GO:0097581
term: lamellipodium organization
ontology: BP
definition:
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lamellipodium. A lamellipodium is a thin sheetlike process extended by the leading edge of a crawling fibroblast; contains a dense meshwork of actin filaments.


go_id: GO:0097582
term: dolichyl-phosphate-mannose-protein mannosyltransferase Pmt1p-Pmt2p dimer complex
ontology: CC
definition:
A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt1p-Pmt2p.


go_id: GO:0097583
term: dolichyl-phosphate-mannose-protein mannosyltransferase Pmt1p-Pmt3p dimer complex
ontology: CC
definition:
A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt1p-Pmt3p.


go_id: GO:0097584
term: dolichyl-phosphate-mannose-protein mannosyltransferase Pmt5p-Pmt2p dimer complex
ontology: CC
definition:
A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt5p-Pmt2p.


go_id: GO:0097585
term: dolichyl-phosphate-mannose-protein mannosyltransferase Pmt5p-Pmt3p dimer complex
ontology: CC
definition:
A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt5p-Pmt3p.


go_id: GO:0097586
term: dolichyl-phosphate-mannose-protein mannosyltransferase Pmt4p homodimer complex
ontology: CC
definition:
A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt4p.


go_id: GO:0097587
term: MutLgamma complex
ontology: CC
definition:
A heterodimer involved in the recognition of base-base and small insertion/deletion mismatches. In S. cerevisiae the complex consists of two subunits, Mlh1 and Mlh3.


go_id: GO:0097589
term: archaeal-type flagellum
ontology: CC
definition:
A non-membrane-bounded organelle superficially similar to a bacterial-type flagellum; they both consist of filaments extending outside the cell, and rotate to propel the cell, but the archaeal flagella (also called archaella) have a unique structure which lacks a central channel. Similar to bacterial type IV pilins, the archaeal flagellins (archaellins) are made with class 3 signal peptides and they are processed by a type IV prepilin peptidase-like enzyme. The archaellins are typically modified by the addition of N-linked glycans which are necessary for proper assembly and/or function.


go_id: GO:0097590
term: archaeal-type flagellum-dependent cell motility
ontology: BP
definition:
Cell motility due to the motion of one or more archaeal-type flagella. An archaeal-type flagellum (also called archaellum) is a non-membrane-bounded organelle superficially similar to a bacterial-type flagellum, but having a different molecular structure and lacking a central channel.


go_id: GO:0097591
term: ventral disc lateral crest
ontology: CC
definition:
Fibrillar repetitive structure surrounding the ventral disc edge in Giardia species (trophozoite stage). The composition of the lateral crest is not fully known yet.


go_id: GO:0097592
term: ventral disc overlap zone
ontology: CC
definition:
A region of the ventral disc of Giardia species (trophozoite stage) where two portions of the same array of microtubules overlap (the microtubule array makes a complete circle and overlaps on itself).


go_id: GO:0097593
term: ventral disc microtubule array
ontology: CC
definition:
A part of the ventral disc of Giardia species (trophozoite stage) consisting of a spiral array of microtubules linked to the ventral membrane. These microtubules form the base of the ventral disc dorsal microribbons that extend nearly perpendicular from the membrane.


go_id: GO:0097594
term: ventral disc dorsal microribbon
ontology: CC
definition:
Trilaminar structure extending perpendicularly into the cytoplasm along the length of ventral disc microtubules in Giardia species (trophozoite stage). Constituents of dorsal microribbons (also called dorsal ribbons or microribbons) include alpha-coiled-helix proteins approximately 29 to 38 kDa in size. These proteins line the edges of the microribbons but are not found in microtubules. Tubulins are not found in microribbons.


go_id: GO:0097595
term: ventral disc crossbridge
ontology: CC
definition:
Structure horizontally linking adjacent microribbons of the ventral disc in Giardia species (trophozoite stage). The composition of crossbridges is not fully known yet.


go_id: GO:0097596
term: ventral disc supernumerary microtubule array
ontology: CC
definition:
A partial left-handed spiral array of microtubules that lies generally dorsal to the main ventral disc microtubule array in Giardia species (trophozoite stage).


go_id: GO:0097597
term: ventral disc
ontology: CC
definition:
Specialized organelle found in Giardia species (trophozoite stage) and characterized by a spiral array of microtubules and microtubule-associated structures including dorsal microribbons and crossbridges. The edge of the ventral disc narrows into a lateral crest. The ventral disk mediates mechanical attachment of the trophozoite to the host's intestinal wall, and contains the contractile proteins actinin, alpha-actinin, myosin, and tropomyosin working towards contraction of the disk involved in adherence.


go_id: GO:0097598
term: sperm cytoplasmic droplet
ontology: CC
definition:
A small amount of cytoplasm surrounded by a cell membrane that is generally retained in spermatozoa after spermiogenesis, when the majority of the cytoplasm is phagocytosed by Sertoli cells to produce "residual bodies". Initially, the droplet is located at the neck just behind the head of an elongated spermatid. During epididymal transit, the cytoplasmic droplet migrates caudally to the annulus at the end of the midpiece; the exact position and time varies by species. The cytoplasmic droplet consists of lipids, lipoproteins, RNAs, a variety of hydrolytic enzymes, receptors, ion channels, and Golgi-derived vesicles. The droplet may be involved in regulatory volume loss (RVD) at ejaculation, and in most species, though not in humans, the cytoplasmic droplet is lost at ejaculation. Note that the cytoplasmic droplet is distinct from "excessive residual cytoplasm" that sometimes remains in epididymal spermatozoa, particularly when spermiogenesis has been disrupted.


go_id: GO:0097600
term: exoxylanase activity
ontology: MF
definition:
A xylanase activity that acts on one of the ends of a xylan polymer which does not contain side chains.


go_id: GO:0097602
term: cullin family protein binding
ontology: MF
definition:
Interacting selectively and non-covalently with any member of the cullin family, hydrophobic proteins that act as scaffolds for ubiquitin ligases (E3).


go_id: GO:0097603
term: temperature-gated ion channel activity
ontology: MF
definition:
Enables the transmembrane transfer of an ion by a channel that opens in response to a temperature stimulus (e.g. exposure to a temperature range different than the optimal temperature for that organism).


go_id: GO:0097604
term: temperature-gated cation channel activity
ontology: MF
definition:
Enables the transmembrane transfer of a cation by a channel that opens in response to a temperature stimulus (e.g. exposure to a temperature range different than the optimal temperature for that organism).


go_id: GO:0097605
term: regulation of nuclear envelope permeability
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the nuclear envelope.


go_id: GO:0097606
term: positive regulation of nuclear envelope permeability
ontology: BP
definition:
Any process that increases the frequency, rate or extent of the passage or uptake of molecules by the nuclear envelope.


go_id: GO:0097607
term: negative regulation of nuclear envelope permeability
ontology: BP
definition:
Any process that decreases the frequency, rate or extent of the passage or uptake of molecules by the nuclear envelope.


go_id: GO:0097608
term: transverse flagellum
ontology: CC
definition:
A motile cilium found in dinoflagellates. It coils around the cell and provides the forward thrust for motility. It is often contained in a furrow called the cingulum, and emerges from a flagellar pore located in the cingulum.


go_id: GO:0097609
term: longitudinal flagellum
ontology: CC
definition:
A motile cilium found in dinoflagellates. It trails the cell and acts as a steering rudder. It is often partially contained in a furrow called the sulcus, and emerges from a flagellar pore located in the sulcus.


go_id: GO:0097610
term: cell surface furrow
ontology: CC
definition:
A furrow that may be found on the cell surface. Examples are the cleavage furrow observed during cytokinesis in animal cells, and the cingulum and sulcus found in some dinoflagellates.


go_id: GO:0097612
term: dinoflagellate sulcus
ontology: CC
definition:
A cell surface furrow that occurs on the ventral side of a dinoflagellate cell. It partially houses the longitudinal flagellum. The sulcus intersects with the cingulum on the ventral side of a dinoflagellate cell.


go_id: GO:0097613
term: dinoflagellate epicone
ontology: CC
definition:
The part of a dinoflagellate cell above the cingulum; also referred to as the anterior portion of a dinoflagellate cell. It is separated from the hypocone by the cingulum.


go_id: GO:0097614
term: dinoflagellate hypocone
ontology: CC
definition:
The part of a dinoflagellate cell below the cingulum; also referred to as the posterior portion of a dinoflagellate cell. It is separated from the epicone by the cingulum.


go_id: GO:0097615
term: modulation by host of symbiont type IV pilus-dependent motility
ontology: BP
definition:
The process in which an organism effects a change in the type IV pilus-dependent motility of a symbiont organism (i.e. the controlled movement of a bacterial cell which is dependent on the presence of type IV pili, and which includes social gliding motility and twitching motility). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.


go_id: GO:0097616
term: positive regulation by host of symbiont type IV pilus-dependent motility
ontology: BP
definition:
Any process in which an organism activates, maintains or increases the frequency, rate or extent of the type IV pilus-dependent motility of a symbiont organism (i.e. the controlled movement of a bacterial cell which is dependent on the presence of type IV pili, and which includes social gliding motility and twitching motility). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.


go_id: GO:0097617
term: annealing activity
ontology: MF
definition:
A nucleic acid binding activity that brings together complementary sequences of nucleic acids so that they pair by hydrogen bonds to form a double-stranded polynucleotide.


go_id: GO:0097618
term: dinoflagellate sulcal notch
ontology: CC
definition:
A dinoflagellate sulcus that extends all the way to the posterior end of the cell (also known as antapex). The presence of a sulcal notch makes the dinoflagellate hypocone appear bilobed.


go_id: GO:0097619
term: PTEX complex
ontology: CC
definition:
A protein complex that acts as a protein trafficking machinery and is responsible for the export of proteins across the parasitophorous (symbiont-containing) vacuolar membrane and into the human host cell. The PTEX complex is located in the vacuole membrane. It is ATP-powered, and comprises heat shock protein 101 (HSP101; a ClpA/B-like ATPase from the AAA+ superfamily, of a type commonly associated with protein translocons), a parasite protein termed PTEX150, and exported protein 2 (EXP2). EXP2 is the potential channel, as it is the membrane-associated component of the core PTEX complex. Two other proteins, PTEX88 and thioredoxin 2 (TRX2), were also identified as PTEX components.


go_id: GO:0097620
term: (R)-mandelate dehydrogenase activity
ontology: MF
definition:
Catalysis of the reaction: (R)-2-hydroxy-2-phenylacetate + acceptor = phenylglyoxylate + reduced acceptor.


go_id: GO:0097622
term: cytoplasmic translational elongation through polyproline stretches
ontology: BP
definition:
The successive addition of amino acid residues to a nascent polypeptide chain, proceeding through regions of multiple repeated proline codons, during protein biosynthesis in the cytoplasm.


go_id: GO:0097623
term: potassium ion export across plasma membrane
ontology: BP
definition:
The directed movement of potassium ions from inside of a cell, across the plasma membrane and into the extracellular region.


go_id: GO:0097625
term: low-affinity basic amino acid transmembrane transporter activity
ontology: MF
definition:
Catalysis of the transfer of basic amino acids from one side of a membrane to the other. Basic amino acids have a pH above 7. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.


go_id: GO:0097626
term: low-affinity L-arginine transmembrane transporter activity
ontology: MF
definition:
Catalysis of the transfer of L-arginine from one side of a membrane to the other. In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.


go_id: GO:0097627
term: high-affinity L-ornithine transmembrane transporter activity
ontology: MF
definition:
Catalysis of the transfer of L-ornithine from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.


go_id: GO:0097629
term: extrinsic component of omegasome membrane
ontology: CC
definition:
The component of the omegasome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.


go_id: GO:0097630
term: intrinsic component of omegasome membrane
ontology: CC
definition:
The component of the omegasome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.


go_id: GO:0097631
term: integral component of omegasome membrane
ontology: CC
definition:
The component of the omegasome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.


go_id: GO:0097632
term: extrinsic component of pre-autophagosomal structure membrane
ontology: CC
definition:
The component of the pre-autophagosomal structure membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.


go_id: GO:0097633
term: intrinsic component of pre-autophagosomal structure membrane
ontology: CC
definition:
The component of the pre-autophagosomal structure membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.


go_id: GO:0097634
term: integral component of pre-autophagosomal structure membrane
ontology: CC
definition:
The component of the pre-autophagosomal structure membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.


go_id: GO:0097635
term: extrinsic component of autophagosome membrane
ontology: CC
definition:
The component of the autophagosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.


go_id: GO:0097636
term: intrinsic component of autophagosome membrane
ontology: CC
definition:
The component of the autophagosome membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.


go_id: GO:0097637
term: integral component of autophagosome membrane
ontology: CC
definition:
The component of the autophagosome membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.


go_id: GO:0097638
term: L-arginine import across plasma membrane
ontology: BP
definition:
The directed movement of L-arginine from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0097639
term: L-lysine import across plasma membrane
ontology: BP
definition:
The directed movement of L-lysine from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0097640
term: L-ornithine import across plasma membrane
ontology: BP
definition:
The directed movement of L-ornithine from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0097641
term: alpha-ketoglutarate-dependent xanthine dioxygenase activity
ontology: MF
definition:
Catalysis of the reaction: 2-oxoglutarate (alpha-ketoglutarate) + O2 + xanthine = CO2 + succinate + urate.


go_id: GO:0097642
term: calcitonin family receptor activity
ontology: MF
definition:
Combining with any member of the calcitonin family (e.g. adrenomedullin, adrenomedullin 2 (intermedin), amylin, calcitonin and calcitonin gene-related peptides (CGRPs)) to initiate a change in cell activity.


go_id: GO:0097644
term: calcitonin family binding
ontology: MF
definition:
Interacting selectively and non-covalently with any member of the calcitonin family (e.g. adrenomedullin, adrenomedullin 2 (intermedin), amylin, calcitonin and calcitonin gene-related peptides (CGRPs)).


go_id: GO:0097646
term: calcitonin family receptor signaling pathway
ontology: BP
definition:
A series of molecular signals initiated by an extracellular member of the calcitonin family (e.g. adrenomedullin, adrenomedullin 2 (intermedin), amylin, calcitonin and calcitonin gene-related peptides (CGRPs)) combining with a calcitonin family receptor on the surface of the target cell. Calcitonin family receptors may form dimers, trimers or tetramers; adrenomedullin and amylin receptors have only been observed as dimers so far.


go_id: GO:0097647
term: amylin receptor signaling pathway
ontology: BP
definition:
A series of molecular signals initiated by an extracellular amylin combining with a dimeric amylin receptor on the surface of the target cell.


go_id: GO:0097649
term: A axonemal microtubule
ontology: CC
definition:
A complete microtubule with 13 protofilaments that fuses with an incomplete microtubule called B tubule (containing 10 protofilaments only) to form an axonemal outer doublet. Inner and outer dynein arms, as well as the radial spoke, are attached to the A tubule.


go_id: GO:0097650
term: B axonemal microtubule
ontology: CC
definition:
An incomplete microtubule containing 10 protofilaments that fuses with a complete microtubule called A tubule (containing 13 protofilaments) to form an axonemal outer doublet.


go_id: GO:0097651
term: phosphatidylinositol 3-kinase complex, class I
ontology: CC
definition:
A phosphatidylinositol 3-kinase complex that contains a catalytic and a regulatory subunit of a phosphatidylinositol 3-kinase (PI3K) enzyme, plus one or more adaptor proteins. Class I PI3Ks phosphorylate phosphatidylinositol [PI], phosphatidylinositol-4-phosphate [PI(4)P] and phosphatidylinositol-4,5-bisphosphate [PI(4,5)P2], and are divided into subclasses A and B according to the type of adaptor subunit with which they associate. The class I PI3K subfamily of genes comprises members in vertebrates, worm and fly, but none in yeast.


go_id: GO:0097652
term: phosphatidylinositol 3-kinase complex, class II
ontology: CC
definition:
A phosphatidylinositol 3-kinase complex that contains a catalytic subunit of a phosphatidylinositol 3-kinase (PI3K) enzyme and one or more adaptor proteins. There is no known obligatory regulatory subunit. The class II PI3K (PI3KC2) subfamily of genes has members in vertebrates, worm and fly, but none in yeast.


go_id: GO:0097653
term: unencapsulated part of cell
ontology: CC
definition:
The part of a cell encompassing the intracellular environment and the plasma membrane; it excludes any external encapsulating structures.


go_id: GO:0097654
term: platelet SNARE complex
ontology: CC
definition:
A SNARE complex that is capable of fusing intracellular vesicles to the plasma membrane of platelets for exocytosis of alpha-granules or dense granules. Contains isoforms of VAMP, SNAP and syntaxin proteins. Ternary SNARE complexes interact in a circular array to form ring complexes or channels around the membrane fusion. A common composition in human is VAMP-8, SNAP-23 and syntaxin-2 or -4.


go_id: GO:0097655
term: serpin family protein binding
ontology: MF
definition:
Interacting selectively and non-covalently with any member of the serpin protein family (serine protease inhibitors or classified inhibitor family I4). Serpins are a broadly distributed family of protease inhibitors that use a conformational change to inhibit target enzymes. They are central in controlling many important proteolytic cascades. The majority of serpins inhibit serine proteases, but serpins that inhibit caspases and papain-like cysteine proteases have also been identified. Rarely, serpins perform a noninhibitory function; for example, several human serpins function as hormone transporters and certain serpins function as molecular chaperones or tumor suppressors.


go_id: GO:0097656
term: cell-cell self recognition
ontology: BP
definition:
A cell-cell recognition process by which a cell distinguishes between self and non self during cooperative behavior, such as early development.


go_id: GO:0097657
term: 3',5'-nucleotide bisphosphate phosphatase activity
ontology: MF
definition:
Catalysis of the reaction: 3',5'-nucleotide bisphosphate + H20 = 5'-nucleotide monophosphate + phosphate.


go_id: GO:0097658
term: Asi complex
ontology: CC
definition:
A nuclear ubiquitin ligase multiprotein complex located in the inner nuclear membrane (INM) that recognizes and ubiquitinates misfolded INM proteins and also some proteins involved in sterol biosynthesis, during ER-associated protein degradation (ERAD). In S. cerevisiae, this complex contains the ubiquitin ligases Asi1p and Asi3p.


go_id: GO:0097663
term: SCF-Dia2/Pof3 ubiquitin ligase complex
ontology: CC
definition:
An SCF ubiquitin ligase complex in which the F-box protein is Dia2 in S. cerevisiae (Pof3 in S. pombe).


go_id: GO:0097664
term: SCF-Grr1/Pof2 ubiquitin ligase complex
ontology: CC
definition:
An SCF ubiquitin ligase complex in which the F-box protein is Grr1 in S. cerevisiae (Pof2 in S. pombe).


go_id: GO:0097666
term: SCF-Met30/Pof1 ubiquitin ligase complex
ontology: CC
definition:
An SCF ubiquitin ligase complex in which the F-box protein is Met30 in S. cerevisiae (Pof1 in S pombe).


go_id: GO:0097667
term: SCF-Rcy1/Pof6 ubiquitin ligase complex
ontology: CC
definition:
An SCF ubiquitin ligase complex in which the F-box protein is Rcy1 in S. cerevisiae (Pof6 in S. pombe).


go_id: GO:0097668
term: SCF-Saf1/Pof9 ubiquitin ligase complex
ontology: CC
definition:
An SCF ubiquitin ligase complex in which the F-box protein is Saf1 in S. cerevisiae (Pof9 in S. pombe).


go_id: GO:0097670
term: SCF-Ufo1/Pof10 ubiquitin ligase complex
ontology: CC
definition:
An SCF ubiquitin ligase complex in which the F-box protein is Ufo1 in S. cerevisiae (Pof10 in S. pombe).


go_id: GO:0097672
term: SCF-Pof5 ubiquitin ligase complex
ontology: CC
definition:
An SCF ubiquitin ligase complex in which the F-box protein is Pof5 in S. pombe (YDR306C in S. cerevisiae).


go_id: GO:0097675
term: SCF-Hrt3/Pof7 ubiquitin ligase complex
ontology: CC
definition:
An SCF ubiquitin ligase complex in which the F-box protein is Hrt3 in S. cerevisiae (Pof7 in S. pombe).


go_id: GO:0097676
term: histone H3-K36 dimethylation
ontology: BP
definition:
The modification of histone H3 by addition of two methyl groups to lysine at position 36 of the histone.


go_id: GO:0097677
term: STAT family protein binding
ontology: MF
definition:
Interacting selectively and non-covalently with any member of the signal transducers and activators of transcription (STAT) protein family. STATs are, as the name indicates, both signal transducers and transcription factors. STATs are activated by cytokines and some growth factors and thus control important biological processes including cell growth, cell differentiation, apoptosis and immune responses.


go_id: GO:0097678
term: SOCS family protein binding
ontology: MF
definition:
Interacting selectively and non-covalently with any member of the suppressor of cytokine signaling (SOCS) family of proteins. SOCS represent an important mechanism to extinguish cytokine and growth factor receptor signaling. Individual SOCS proteins are typically induced by specific cytokines and growth factors, thereby generating a negative feedback loop. SOCS proteins have important functions in development and homeostasis, and in disease, particularly tumor suppression and anti-inflammatory functions.


go_id: GO:0097680
term: double-strand break repair via classical nonhomologous end joining
ontology: BP
definition:
An instance of double-strand break repair via nonhomologous end joining that requires a number of factors important for V(D)J recombination, including the KU70/80 heterodimer (KU), XRCC4, ligase IV, and DNA-PKcs in mammals. It does not produce translocations (as opposed to the alternative nonhomologous end joining).


go_id: GO:0097681
term: double-strand break repair via alternative nonhomologous end joining
ontology: BP
definition:
An instance of double-strand break repair via nonhomologous end joining that is independent of factors important for V(D)J recombination (as opposed to classical nonhomologous end joining). It often results in a deletion with microhomology (i.e. 5-25bp homology) at the repair junction. Among different subclasses of nonhomologous end joining (NHEJ), alternative NHEJ appears to play a significant role in the etiology of mutations that arise during cancer development and treatment.


go_id: GO:0097682
term: intracellular phosphatidylinositol-3,5-bisphosphate-sensitive cation channel activity
ontology: MF
definition:
Enables the transmembrane transfer of cations by a channel that opens when phosphatidylinositol-3,5-bisphosphate has been bound by the channel complex or one of its constituent parts.


go_id: GO:0097685
term: dinoflagellate apical groove
ontology: CC
definition:
A cell surface furrow (or groove) found on a dinoflagellate apex. It typically loops around the apex.


go_id: GO:0097688
term: glutamate receptor clustering
ontology: BP
definition:
The neurotransmitter-gated ion channel clustering process in which glutamate receptors are localized to distinct domains in the cell membrane.


go_id: GO:0097689
term: iron channel activity
ontology: MF
definition:
Enables selective, facilitated diffusion of an iron ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.


go_id: GO:0098001
term: receptor-mediated bacteriophage reversible attachment to host cell
ontology: BP
definition:
Process by which a bacteriophage, using its tail fibers, spikes or a baseplate component, initially recognizes and binds to its specific receptor on the host cell surface. This process is reversible and allows the release of a bacteriophage without affecting infection.


go_id: GO:0098002
term: receptor-mediated bacteriophage irreversible attachment to host cell
ontology: BP
definition:
The processes by which a bacteriophage initially commits to infection by binding the host receptor irreversibly. Disruption of the phage:cell complex at this step results in the loss of infective phage virions since the process is characterized by conformational changes of bacteriophage head and tail proteins and injection of bacteriophage proteins into the infected cell.


go_id: GO:0098004
term: virus tail fiber assembly
ontology: BP
definition:
The aggregation, arrangement and bonding together of a set of components to form a virus tail fiber.


go_id: GO:0098006
term: viral DNA genome packaging, headful
ontology: BP
definition:
The encapsulation of the viral genome within the capsid where DNA is packaged into the capsid until the capsid is full.


go_id: GO:0098009
term: virus terminase, large subunit
ontology: CC
definition:
The part of the viral terminase complex that contains the translocase activity. The large subunit typically comprises a pentameric protein complex.


go_id: GO:0098015
term: virus tail
ontology: CC
definition:
Part of the virion that may be used to recognize, attach and inject the viral genome and accessory proteins into the host cell.


go_id: GO:0098017
term: viral capsid, major subunit
ontology: CC
definition:
The part of the viral capsid that comprises the most common capsomere type. For example, in a T=3 icosahedral capsid, which is composed of 12 pentameric and 20 hexameric capsomeres, the hexameric capsomeres are major subunits.


go_id: GO:0098018
term: viral capsid, minor subunit
ontology: CC
definition:
The part of the viral capsid that comprises the less common capsomere type. For example, in a T=3 icosahedral capsid, which is composed of 12 pentameric and 20 hexameric capsomeres, the pentameric capsomeres are minor subunits.


go_id: GO:0098021
term: viral capsid, decoration
ontology: CC
definition:
Component of the virus capsid (head), located on the outer head surface. Involved in the stabilization of the head structure and usually non-essential.


go_id: GO:0098025
term: virus tail, baseplate
ontology: CC
definition:
Multiprotein component at the distal (head) end of the virus tail to which fibers of tailed viruses may be attached.


go_id: GO:0098026
term: virus tail, tube
ontology: CC
definition:
The internal tube of the contractile tails of some viruses. The virus tail tube is the channel for DNA ejection into the host cytoplasm.


go_id: GO:0098027
term: virus tail, sheath
ontology: CC
definition:
The external contractile envelope of the tail of some viruses. Its contraction ensures ejection of the virus DNA into the host cytoplasm.


go_id: GO:0098029
term: icosahedral viral capsid, spike
ontology: CC
definition:
A short structure attached to an icosahedral virion capsid, and used for attachment to the host cell.


go_id: GO:0098030
term: icosahedral viral capsid, neck
ontology: CC
definition:
A region of constriction located below the head and above the tail sheath of viruses with contractile tails (Myoviridae).


go_id: GO:0098035
term: viral DNA genome packaging via site-specific sequence recognition
ontology: BP
definition:
The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites by a viral terminase.


go_id: GO:0098036
term: viral DNA genome packaging, 3' extended cos packaging
ontology: BP
definition:
The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites to produce 3' protruding ends.


go_id: GO:0098037
term: viral DNA genome packaging, 5' extended cos packaging
ontology: BP
definition:
The encapsulation of the viral DNA genome within the capsid, which proceeds via cleavage of the viral DNA at specific sites to produce 5' protruding ends.


go_id: GO:0098038
term: non-replicative transposition, DNA-mediated
ontology: BP
definition:
Process by which a transposable element is excised from the donor site and integrated at the target site without replication of the element. Also referred to as cut-and-paste transposition.


go_id: GO:0098039
term: replicative transposition, DNA-mediated
ontology: BP
definition:
Process of transposition in which the existing element is replicated and one of the copies is excised and integrated at a new target site. Also referred to as copy-and-paste transposition.


go_id: GO:0098046
term: type V protein secretion system complex
ontology: CC
definition:
A complex of proteins that permits the translocation of proteins across the outer membrane via a transmembrane pore, formed by a beta-barrel, into the extracellular milieu or directly into host cells; the secreted proteins contain all the information required for translocation of an effector molecule through the cell envelope. The type V secretion systems includes the autotransporters (type Va), the two-partner secretion system (type Vb) and the Oca family (type Vc).


go_id: GO:0098061
term: viral capsid, internal space
ontology: CC
definition:
The region of a virus contained within the capsid shell, and usually containing the viral genome and accessory proteins.


go_id: GO:0098508
term: endothelial to hematopoietic transition
ontology: BP
definition:
The generation of hematopoietic stem cells from hemogenic endothelial cells by a process that includes tight-junction dissolution and loss of cell polarity followed by delamination from the endothelium.


go_id: GO:0098509
term: sensory perception of humidity
ontology: BP
definition:
The series of events required for an organism to detect some level of humidity in its environment, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.


go_id: GO:0098510
term: sensory perception of high humidity
ontology: BP
definition:
The series of events required for an organism to detect high environmental humidity, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.


go_id: GO:0098511
term: sensory perception of low humidity
ontology: BP
definition:
The series of events required for an organism to detect low environmental humidity, convert this detection into a molecular signal, and recognize and characterize the signal. This is a neurological process.


go_id: GO:0098512
term: detection of humidity stimulus involved in sensory perception
ontology: BP
definition:
The series of events in which a humidity stimulus is received and converted into a molecular signal as part of the sensory perception of humidity.


go_id: GO:0098513
term: detection of humidity
ontology: BP
definition:
The series of events in which a humidity stimulus is received and converted into a molecular signal.


go_id: GO:0098514
term: detection of high humidity stimulus involved in sensory perception
ontology: BP
definition:
The series of events in which a high humidity stimulus is detected and converted into a molecular signal as a part of the sensory detection of high humidity.


go_id: GO:0098515
term: detection of low humidity stimulus involved in sensory perception
ontology: BP
definition:
The series of events in which a low humidity stimulus is detected and converted into a molecular signal as a part of the sensory detection of low humidity.


go_id: GO:0098520
term: excitatory neuromuscular junction
ontology: CC
definition:
The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a post-synaptic potential responsible for muscle contraction.


go_id: GO:0098521
term: inhibitory neuromuscular junction
ontology: CC
definition:
The junction between the axon of a motor neuron and a muscle fiber. In response to the arrival of action potentials, the presynaptic button releases molecules of neurotransmitters into the synaptic cleft. These diffuse across the cleft and transmit the signal to the postsynaptic membrane of the muscle fiber, leading to a change in post-synaptic potential that inhibits muscle contraction.


go_id: GO:0098524
term: neuromuscular junction of somatic muscle myotube
ontology: CC
definition:
A neuromuscular junction in which the target muscle cell is a somatic muscle myotube, such as an arthropod somatic muscle cell.


go_id: GO:0098525
term: excitatory neuromuscular junction of somatic myotube
ontology: CC
definition:
A neuromuscular junction that functions in the excitation of somatic muscle myotubes, such as an arthropod somatic muscle cells.


go_id: GO:0098526
term: inhibitory neuromuscular junction of somatic myotube
ontology: CC
definition:
A neuromuscular junction that functions in the inhibition of somatic muscle myotube contraction. Examples of somatic muscle myotubes include the somatic muscle cells of arthropods.


go_id: GO:0098527
term: neuromuscular junction of somatic muscle
ontology: CC
definition:
A neuromuscular junction in which the target muscle cell is a somatic muscle cell, such as those found in nematodes and arthropods.


go_id: GO:0098528
term: skeletal muscle fiber differentiation
ontology: BP
definition:
The process in which a relatively unspecialized cell acquires specialized features of a skeletal muscle fiber cell. Skeletal muscle fiber differentiation starts with myoblast fusion and the appearance of specific cell markers (this is the cell development step). Then individual skeletal muscle fibers fuse to form bigger myotubes and start to contract.


go_id: GO:0098529
term: neuromuscular junction development, skeletal muscle fiber
ontology: BP
definition:
A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a neuromuscular junction that targets a skeletal muscle fiber.


go_id: GO:0098530
term: positive regulation of strand invasion
ontology: BP
definition:
Any process that increases the rate, frequency or extent of strand invasion. Strand invasion is the process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.


go_id: GO:0098531
term: transcription factor activity, direct ligand regulated sequence-specific DNA binding
ontology: MF
definition:
A DNA binding transcription factor activity that is directly regulated by binding of a ligand to the protein with this activity.  Examples include the lac and trp repressors in E.coli and many steroid hormone receptors.


go_id: GO:0098532
term: histone H3-K27 trimethylation
ontology: BP
definition:
The modification of histone H3 by addition of three methyl groups to lysine at position 27 of the histone.


go_id: GO:0098533
term: ATPase dependent transmembrane transport complex
ontology: CC
definition:
A transmembrane protein complex that functions in ATPase dependent active transport across a membrane.


go_id: GO:0098535
term: de novo centriole assembly
ontology: BP
definition:
Centriole assembly in which a centriole arises de novo by a process involving an electron dense structure known as a deuterosome, rather than by duplication of an existing centriole.


go_id: GO:0098536
term: deuterosome
ontology: CC
definition:
A spherical, electron dense, cytoplasmic structure that is involved in de novo assembly of centrioles.


go_id: GO:0098537
term: lobed nucleus
ontology: CC
definition:
Nucleus with two or more lobes connected by a thin filament that contains no internal chromatin.  Examples include the nuclei of mature basophils, eosinophils and neutrophils in mice and humans.


go_id: GO:0098542
term: defense response to other organism
ontology: BP
definition:
Reactions triggered in response to the presence of another organism that act to protect the cell or organism from damage caused by that organism.


go_id: GO:0098543
term: detection of other organism
ontology: BP
definition:
The series of events in which a stimulus from another organism is received and converted into a molecular signal.


go_id: GO:0098544
term: maintenance of protein complex location
ontology: BP
definition:
Any process in which a protein complex is maintained in a location and prevented from moving elsewhere. These include sequestration, stabilization to prevent transport elsewhere and the active retrieval of protein complexes that move away.


go_id: GO:0098545
term: maintenance of protein complex location in cytoplasm
ontology: BP
definition:
Any process in which a protein complex is maintained in a specific location within the cytoplasm and is prevented from moving elsewhere.


go_id: GO:0098546
term: 2',5-3',5'-cyclic GMP-AMP binding
ontology: MF
definition:
Interacting selectively and non-covalently with c[G(2',5')pA(2',5')p], a cyclic purine dinucleotide that consists of AMP and GMP units cyclized via 2',5' and 3',5' linkages.


go_id: GO:0098549
term: somatic ring canal
ontology: CC
definition:
A stable intercellular bridge between somatic cells.  Examples include the intercellular bridges between ovarian follicle cells in insects and between imaginal disc cells in insects.


go_id: GO:0098552
term: side of membrane
ontology: CC
definition:
A cellular component consisting of one leaflet of a membrane bilayer and any proteins embedded or anchored in it or attached to its surface.


go_id: GO:0098561
term: methyl accepting chemotaxis protein complex
ontology: CC
definition:
A transmembrane protein complex that consists of multiple methyl-accepting chemoreceptor protein subunits, a histidine kinase and a connector protein and which functions in the regulation of flagellar rotary motor activity in response to an external chemical stimulus.


go_id: GO:0098563
term: intrinsic component of synaptic vesicle membrane
ontology: CC
definition:
The component of the synaptic vesicle membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.


go_id: GO:0098567
term: periplasmic side of plasma membrane
ontology: CC
definition:
The side (leaflet) of a plasma membrane that faces the periplasm, and all proteins embedded in it or attached to its surface.


go_id: GO:0098568
term: external side of mycolate outer membrane
ontology: CC
definition:
The side (leaflet) of the mycolate outer membrane that faces the environment and any proteins embedded in it or loosely bound to its surface.


go_id: GO:0098569
term: internal side of mycolate outer membrane
ontology: CC
definition:
The side of the mycolate outer membrane that faces the cell wall peptidoglycan. It is rich in long-chain mycolic acids (hydroxylated branched-chain fatty acids) that are covalently linked to the cell wall peptidoglycan via an arabinogalactan network.


go_id: GO:0098570
term: stromal side of plastid inner membrane
ontology: CC
definition:
The side (leaflet) of the plastid inner membrane that faces the stroma, and any proteins embedded in it or loosely bound to its surface.


go_id: GO:0098571
term: lumenal side of plastid thylakoid membrane
ontology: CC
definition:
The side (leaflet) of the plastid thylakoid membrane that faces the lumen, and any proteins embedded in it or loosely bound to its surface.


go_id: GO:0098572
term: stromal side of plastid thylakoid membrane
ontology: CC
definition:
The side (leaflet) of the plastid thylakoid membrane that faces the stroma, and any proteins embedded in it or loosely bound to its surface.


go_id: GO:0098573
term: intrinsic component of mitochondrial membrane
ontology: CC
definition:
The component of the mitochondrial membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.


go_id: GO:0098578
term: condensed chromatin of inactivated sex chromosome
ontology: CC
definition:
A condensed form of chromatin that is associated with an inactivated sex chromosome and which is responsible for its inactivation.


go_id: GO:0098581
term: detection of external biotic stimulus
ontology: BP
definition:
The series of events in which an external biotic stimulus is detected and converted into a molecular signal.  An external biotic stimulus is defined as one caused or produced by a living organism other than the one being stimulated.


go_id: GO:0098584
term: host cell synaptic vesicle
ontology: CC
definition:
A secretory organelle of a host cell, some 50 nm in diameter, of presynaptic nerve terminals; accumulates in high concentrations of neurotransmitters and secretes these into the synaptic cleft by fusion with the 'active zone' of the presynaptic plasma membrane.


go_id: GO:0098586
term: cellular response to virus
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a virus.


go_id: GO:0098589
term: membrane region
ontology: CC
definition:
A membrane that is a part of a larger membrane.  Examples include the apical region of the plasma membrane of an epithelial cell and the various regions of the endoplasmic reticulum membrane.


go_id: GO:0098591
term: external side of apical plasma membrane
ontology: CC
definition:
The leaflet the apical region of the plasma membrane that faces away from the cytoplasm and any proteins embedded or anchored in it or attached to its surface.


go_id: GO:0098593
term: goblet cell theca
ontology: CC
definition:
A cup shaped specialization of the cytoskeleton that forms a thin layer located just below the apical mass of mature mucin secretory granules in the cytoplasm of goblet cells of the intestinal epithelium.  It consists of an orderly network of intermediate filaments and microtubules. Microtubules are arranged vertically, like barrel staves, along the inner aspect of the theta. Intermediate filaments form two networks: an inner, basketlike network and an outer series of circumferential bundles resembling the hoops of a barrel.


go_id: GO:0098595
term: perivitelline space
ontology: CC
definition:
The space between the membrane of an oocyte and a surrounding membranous structure (zona pellucida or perivitelline membrane).


go_id: GO:0098598
term: learned vocalization behavior or vocal learning
ontology: BP
definition:
Vocalisation behavior that is the result of learning, or the process by which new vocalizations are learned.


go_id: GO:0098600
term: selenomethionine gamma-lyase activity
ontology: MF
definition:
Catalysis of the reaction: L-Selenomethionine + H2O => Methaneselenol + Ammonia + 2-oxobutanoic acid.


go_id: GO:0098601
term: selenomethionine adenosyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: ATP + L-Selenomethionine + H2O => Orthophosphate + Diphosphate + Se-Adenosylselenomethionine.


go_id: GO:0098602
term: single organism cell adhesion
ontology: BP
definition:
The attachment, via cell adhesion molecules, of a cell to either another cell of the same organism, or to an underlying substrate of the same organism such as the extracellular matrix.


go_id: GO:0098603
term: selenol Se-methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: R + Se-Adenosylselenomethionine => CH3-R + Se-Adenosyl-L-selenohomocysteine.


go_id: GO:0098604
term: adenosylselenohomocysteinase activity
ontology: MF
definition:
Catalysis of the reaction: Se-Adenosyl-L-selenohomocysteine + H2O => Adenosine + Selenohomocysteine.


go_id: GO:0098606
term: selenocystathionine gamma-lyase activity
ontology: MF
definition:
Catalysis of the reaction: L-Selenocystathionine + H2O => L-Selenocysteine + NH3 + 2-Oxobutanoic acid.


go_id: GO:0098611
term: cell-cell adhesion involved in galactose-specific flocculation
ontology: BP
definition:
Cell-cell adhesion between two single-celled organisms, during flocculation, mediated via the binding of cell wall proteins on one cell to galactose residues on the other.


go_id: GO:0098612
term: cell-cell adhesion involved in mannose-specific flocculation
ontology: BP
definition:
Cell-cell adhesion between two single-celled organisms, during flocculation, mediated via the binding of cell wall proteins on one cell to mannose residues on the other.


go_id: GO:0098613
term: methaneselenol methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-Adenosyl-L-methionine + Methaneselenol => S-Adenosyl-L-homocysteine + Dimethyl selenide.


go_id: GO:0098614
term: hydrogen selenide methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-Adenosyl-L-methionine + Hydrogen selenide => S-Adenosyl-L-homocysteine + Methaneselenol.


go_id: GO:0098615
term: dimethyl selenide methyltransferase activity
ontology: MF
definition:
Catalysis of the reaction: S-adenosyl-L-methionine + dimethyl selenide => S-adenosyl-L-homocysteine + trimethylselenonium.


go_id: GO:0098618
term: selenomethionine-tRNA ligase activity
ontology: MF
definition:
Catalysis of the reaction: ATP + L-Selenomethionine + tRNA(Met) => AMP + Diphosphate + Selenomethionyl-tRNA(Met).


go_id: GO:0098621
term: phosphoseryl-selenocysteinyl-tRNA selenium transferase activity
ontology: MF
definition:
Catalysis of the reaction: O-Phosphoseryl-tRNA(Sec) + Selenophosphoric acid + H2O => L-Selenocysteinyl-tRNA(Sec) + 2 phosphoric acid.


go_id: GO:0098622
term: selenodiglutathione-disulfide reductase activity
ontology: MF
definition:
Catalysis of the reaction: H+ + selenodiglutathione + NADPH => gluthathioselenol + glutathione + NADP+.


go_id: GO:0098624
term: 3'-Phosphoadenylylselenate reductase activity
ontology: MF
definition:
Catalysis of the reaction: 3'-Phosphoadenylylselenate + NADPH => Adenosine 3',5'-bisphosphate + Selenite + NADP+ + H+.


go_id: GO:0098629
term: trans-Golgi network membrane organization
ontology: BP
definition:
A process which results in the assembly, arrangement of constituent parts, or disassembly of a trans-Golgi network membrane.


go_id: GO:0098637
term: protein complex involved in cell-matrix adhesion
ontology: CC
definition:
Any protein complex that is capable of carrying out some part of the process of cell-matrix adhesion.


go_id: GO:0098643
term: banded collagen fibril
ontology: CC
definition:
A supramolecular assembly of fibrillar collagen complexes in the form of a long fiber (fibril) with transverse striations (bands).


go_id: GO:0098649
term: response to peptidyl-dipeptidase A inhibitor
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidyl-dipeptidase A inhibitor stimulus.


go_id: GO:0098652
term: collagen type VII anchoring fibril
ontology: CC
definition:
An antiparallel dimer of two collagen VII trimers, one end of which is embedded in the lamina densa while the other end attaches to banded collagen fibrils in the dermis.


go_id: GO:0098653
term: centromere clustering
ontology: BP
definition:
The process by which centromeres/kinetochores become localized to clusters. In Saccharomyces cerevisiae, kinetochores form a single cluster before metaphase and later in the cell cycle appear as two clusters.


go_id: GO:0098654
term: CENP-A recruiting complex
ontology: CC
definition:
A protein complex that includes Mis16(Yippee family) and/or Mis18 (WD repeat) subunits that is involved in the deposition of centromere specific (CENP-A containing) nucleosomes at the centromere.


go_id: GO:0098655
term: cation transmembrane transport
ontology: BP
definition:
A process in which a cation is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.


go_id: GO:0098656
term: anion transmembrane transport
ontology: BP
definition:
A process in which an anion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.


go_id: GO:0098657
term: import into cell
ontology: BP
definition:
The directed movement of some substance from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.


go_id: GO:0098658
term: inorganic anion import into cell
ontology: BP
definition:
The directed movement of inorganic anions from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.


go_id: GO:0098659
term: inorganic cation import into cell
ontology: BP
definition:
The directed movement of inorganic cations from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.


go_id: GO:0098660
term: inorganic ion transmembrane transport
ontology: BP
definition:
A process in which an inorganic ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.


go_id: GO:0098661
term: inorganic anion transmembrane transport
ontology: BP
definition:
A process in which an inorganic anion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.


go_id: GO:0098662
term: inorganic cation transmembrane transport
ontology: BP
definition:
A process in which an inorganic cation is transported from one side of a membrane to the other by means of some agent such as a transporter or pore.


go_id: GO:0098700
term: neurotransmitter loading into synaptic vesicle
ontology: BP
definition:
The active transport of neurotransmitters into a synaptic vesicle. Typically this import is fuelled by an electrochemical gradient across the vacuolar membrane, established by the action vacuolar proton pumps (see 'synaptic vesicle lumen acidification' GO:0097401).


go_id: GO:0098701
term: endocytic import into cell
ontology: BP
definition:
The directed movement of some substance from the outside of a cell into a cytoplasmic vesicle via endocytosis.


go_id: GO:0098702
term: adenine import across plasma membrane
ontology: BP
definition:
The directed movement of adenine from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098703
term: calcium ion import across plasma membrane
ontology: BP
definition:
The directed movement of calcium ions from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098704
term: carbohydrate import across plasma membrane
ontology: BP
definition:
The directed movement of a carbohydrate from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098705
term: copper ion import across plasma membrane
ontology: BP
definition:
The directed movement of copper ions from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098706
term: ferric iron import across plasma membrane
ontology: BP
definition:
The directed movement of ferric iron ions (Fe(III) or Fe3+) from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098707
term: ferrous iron import across plasma membrane
ontology: BP
definition:
The directed movement of ferrous iron ions (Fe(II) or Fe2+) from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098708
term: glucose import across plasma membrane
ontology: BP
definition:
The directed movement of glucose from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098709
term: glutathione import across plasma membrane
ontology: BP
definition:
The directed movement of glutathione from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098710
term: guanine import across plasma membrane
ontology: BP
definition:
The directed movement of guanine from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098711
term: iron ion import across plasma membrane
ontology: BP
definition:
The directed movement of iron ions from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098712
term: L-glutamate import across plasma membrane
ontology: BP
definition:
The directed movement of L-glutamate from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098713
term: leucine import across plasma membrane
ontology: BP
definition:
The directed movement of leucine from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098714
term: malate import across plasma membrane
ontology: BP
definition:
The directed movement of malate from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098715
term: malonic acid import across plasma membrane
ontology: BP
definition:
The directed movement of malonic acid from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098716
term: nickel cation import across plasma membrane
ontology: BP
definition:
The directed movement of nickel cations from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098717
term: pantothenate import across plasma membrane
ontology: BP
definition:
The directed movement of pantothenate from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098718
term: serine import across plasma membrane
ontology: BP
definition:
The directed movement of serine from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098719
term: sodium ion import across plasma membrane
ontology: BP
definition:
The directed movement of sodium ions from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098720
term: succinate import across plasma membrane
ontology: BP
definition:
The directed movement of succinate from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098721
term: uracil import across plasma membrane
ontology: BP
definition:
The directed movement of uracil from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098722
term: asymmetric stem cell division
ontology: BP
definition:
Division of a stem cell during which it retains its identity and buds off a daughter cell with a new identity.


go_id: GO:0098724
term: symmetric stem cell division
ontology: BP
definition:
Symmetric division of a stem cell to produce two stem cells of the same type as the parent. Symmetric stem cell division is necessary for amplification of stem cell populations in the absence of sources of stem cells external to an existing population.


go_id: GO:0098726
term: symmetric division of skeletal muscle satellite stem cell
ontology: BP
definition:
The symmetric division of a skeletal muscle satellite stem cell, resulting in two skeletal muscle satellite stem cells.  This process is involved in amplification of the pool of these cells.


go_id: GO:0098728
term: germline stem cell asymmetric division
ontology: BP
definition:
The self-renewing division of a germline stem cell, to produce a daughter stem cell and a daughter germ cell which will divide to form one or more gametes.


go_id: GO:0098730
term: male germline stem cell symmetric division
ontology: BP
definition:
The symmetric division of a male germline stem cell to produce two male germline stem cells.  An example of this is found in mammalian spermatogonial stem cells, some proportion of which divide symmetrically, so amplifying the population. The choice between asymmetric and symmetric division in this case appears to be internal and stochastic.


go_id: GO:0098731
term: skeletal muscle satellite stem cell maintenance involved in skeletal muscle regeneration
ontology: BP
definition:
Any process by which the number of skeletal muscle satellite stem cells in a skeletal muscle is maintained during skeletal muscle regeneration. There are at least two mechanisms by which this is achieved. Skeletal muscle satellite stem cell asymmetric division ensures satellite stem cell numbers are kept constant. Symmetric division of these cells amplifies the number of skeletal muscle satellite stem cells.


go_id: GO:0098732
term: macromolecule deacylation
ontology: BP
definition:
The removal of an acyl group, any group or radical of the form RCO- where R is an organic group, from a macromolecule.


go_id: GO:0098737
term: protein insertion into plasma membrane
ontology: BP
definition:
The process that results in the incorporation of a protein into a plasma membrane.  Incorporation in this context means having some part or covalently attached group that is inserted into the the hydrophobic region of one or both bilayers.


go_id: GO:0098739
term: import across plasma membrane
ontology: BP
definition:
The directed movement of some substance from outside of a cell, across the plasma membrane and into the cytosol.


go_id: GO:0098740
term: multi organism cell adhesion
ontology: BP
definition:
Cell adhesion that involves cells from multiple organisms or that is mediated by gene products from multiple organisms.


go_id: GO:0098741
term: adhesion between unicellular organisms via cell-wall interaction
ontology: BP
definition:
The attachment of two unicellular organisms to each other via interaction between cell-wall components.


go_id: GO:0098742
term: cell-cell adhesion via plasma-membrane adhesion molecules
ontology: BP
definition:
The attachment of one cell to another cell via adhesion molecules that are at least partially embedded in the cell membrane.


go_id: GO:0098743
term: cell aggregation
ontology: BP
definition:
The clustering together and adhesion of initially separate cells to form an aggregate.  Examples include the clustering of unicellular organisms or blood cells in suspension and the condensation of mesenchymal cells during cartilage formation.


go_id: GO:0098745
term: Dcp1-Dcp2 complex
ontology: CC
definition:
A protein complex consisting of a Dcp1 regulatory subunit and a Dcp2 catalytic subunit that has mRNA cap binding activity and is involved in decapping of nuclear-transcribed mRNA.


go_id: GO:0098746
term: fast, calcium ion-dependent exocytosis of neurotransmitter
ontology: BP
definition:
The fast, initial phase of calcium ion-induced neurotransmitter release, via exocytosis, into the synaptic cleft. This depends on low affinity calcium sensors and typically begins a fraction of a millisecond after Ca2+ influx, and decays rapidly (1-10ms) with a decay constant of around 5-10ms. The underlying molecular mechanisms of this process are distinct from those of the later, slow phase of release.


go_id: GO:0098747
term: slow, calcium ion-dependent exocytosis of neurotransmitter
ontology: BP
definition:
The slow, second phase of calcium ion-induced neurotransmitter release, via exocytosis, into the synaptic cleft. This depends on high affinity calcium sensors and decays slowly, typically with a decay constant of over 100ms. The underlying molecular mechanisms of this process are distinct from those of the earlier, fast phase of release.


go_id: GO:0098748
term: endocytic adaptor activity
ontology: MF
definition:
The binding activity of a molecule that brings together two or more protein molecules, or a protein and another macromolecule or complex as a key step in receptor mediated endocytosis.


go_id: GO:0098749
term: cerebellar neuron development
ontology: BP
definition:
The process whose specific outcome is the progression of a cerebellar neuron over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.


go_id: GO:0098751
term: bone cell development
ontology: BP
definition:
The process whose specific outcome is the progression of a bone cell over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell.


go_id: GO:0098752
term: integral component of the cytoplasmic side of the plasma membrane
ontology: CC
definition:
The component of the plasma membrane consisting of the gene products that penetrate only the cytoplasmic side of the membrane.


go_id: GO:0098753
term: anchored component of the cytoplasmic side of the plasma membrane
ontology: CC
definition:
The component of the plasma membrane consisting of gene products and protein complexes with covalently attached hydrophobic anchors products that penetrate only the cytoplasmic side of the membrane.


go_id: GO:0098754
term: detoxification
ontology: BP
definition:
Any process that reduces or removes the toxicity of a toxic substance. These may include transport of the toxic substance away from sensitive areas and to compartments or complexes whose purpose is sequestration of the toxic substance.


go_id: GO:0098756
term: response to interleukin-21
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-21 stimulus.


go_id: GO:0098757
term: cellular response to interleukin-21
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-21 stimulus.


go_id: GO:0098758
term: response to interleukin-8
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-8 stimulus.


go_id: GO:0098759
term: cellular response to interleukin-8
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-8 stimulus.


go_id: GO:0098760
term: response to interleukin-7
ontology: BP
definition:
Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-7 stimulus.


go_id: GO:0098761
term: cellular response to interleukin-7
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-7 stimulus.


go_id: GO:0098762
term: meiotic cell cycle phase
ontology: BP
definition:
One of the distinct periods or stages into which the meiotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.


go_id: GO:0098763
term: mitotic cell cycle phase
ontology: BP
definition:
One of the distinct periods or stages into which the mitotic cell cycle is divided. Each phase is characterized by the occurrence of specific biochemical and morphological events.


go_id: GO:0098764
term: meiosis I cell cycle phase
ontology: BP
definition:
A meiotic cell cycle phase prior to a during which some part of meiosis I nuclear division or the proceeding cytokinesis occurs.


go_id: GO:0098768
term: meiotic prometaphase I
ontology: BP
definition:
The meiotic cell cycle phase in eukaryotes between meiotic prophase I and meiotic metaphase I. During meiotic prometaphase I, the nuclear envelope breaks down and one kinetochore forms per chromosome. Chromosomes attach to spindle microtubules and begin to move towards the metaphase plate.


go_id: GO:0098769
term: TIMP family protein binding
ontology: MF
definition:
Interacting selectively and non-covalently with any member of the Tissue inhibitors of metalloproteinases (TIMPs) family. TIMPs are endogenous protein regulators of the matrix metalloproteinase (MMPs) family


go_id: GO:0098770
term: FBXO family protein binding
ontology: MF
definition:
Interacting selectively and non-covalently with any member of the FBXO protein family. Members of this family have an F-box protein motif of approximately 50 amino acids that functions as a site of protein-protein interaction.


go_id: GO:0098771
term: inorganic ion homeostasis
ontology: BP
definition:
Any process involved in the maintenance of an internal steady state of inorganic ions within an organism or cell.


go_id: GO:0098772
term: molecular function regulator
ontology: MF
definition:
A molecular function that modulates the activity of a gene product or complex.  Examples include enzyme regulators and channel regulators.


go_id: GO:0098773
term: skin epidermis development
ontology: BP
definition:
The process whose specific outcome is the progression of the skin epidermis over time, from its formation to the mature structure.


go_id: GO:0098774
term: curli
ontology: CC
definition:
A proteinaceous extracellular fiber, produced by an enteric bacterium, that is involved in surface and cell-cell contacts that promote community behavior and host colonization.


go_id: GO:0098775
term: curli assembly
ontology: BP
definition:
The process of assembly of curli, extracellular fibers produced by enteric bacteria.  This process occurs outside the cell, where it is coupled to secretion across the cell outer membrane via nucleation by elements of the transporter complex.


go_id: GO:0098777
term: protein secretion by the type VIII secretion system
ontology: BP
definition:
Protein secretion through the outer membrane via the mechanism used for the secretion of curli subunits.


go_id: GO:0098778
term: curli subunit secretion coupled to curli assembly
ontology: BP
definition:
The secretion of soluble curli subunits through the outer membrane, coupled to nucleation of curli fiber formation at the membrane surface.


go_id: GO:0098779
term: mitophagy in response to mitochondrial depolarization
ontology: BP
definition:
The macromitophagy process that is triggered by a detection of the loss of mitochondrial membrane potential.


go_id: GO:0098780
term: response to mitochondrial depolarisation
ontology: BP
definition:
Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) in response to the depolaristation of one or more mitochondria.


go_id: GO:0098782
term: mechanically-gated potassium channel activity
ontology: MF
definition:
Enables the transmembrane transfer of a potassium ion by a channel that opens in response to a mechanical stress.


go_id: GO:0098783
term: correction of merotelic kinetochore attachment, mitotic
ontology: BP
definition:
The cell cycle process that corrects the anomalous association of a single chromatid kinetochore with mitotic spindle microtubules emanating from both spindle poles (otherwise known as merotellic attachment to the spindle).


go_id: GO:0098784
term: biofilm matrix organization
ontology: BP
definition:
A process that results in the assembly, arrangement of constituent parts, or disassembly of a biofilm matrix.


go_id: GO:0098787
term: mRNA cleavage involved in mRNA processing
ontology: BP
definition:
Cleavage of an immature mRNA transcript to produce one or more more mature mRNA transcripts, prior to translation into polypeptide.


go_id: GO:0098788
term: dendritic knob
ontology: CC
definition:
The terminal swelling of an apical dendrite of an olfactory receptor neuron. Each knob gives rise to 5 to 20 long delicate nonmotile cilia, which extend into the mucus covering the sensory epithelium


go_id: GO:0098789
term: pre-mRNA cleavage required for polyadenylation
ontology: BP
definition:
The targeted, endonucleolytic cleavage of a pre-mRNA,  required for polyadenylation of the 3' end.  This cleavage is directed by binding sites near the 3' end of the mRNA and leaves a 3' hydoxyl end which then becomes a target for adenylation.


go_id: GO:0098790
term: ncRNA transcription associated with protein coding gene TSS/TES
ontology: BP
definition:
The transcription of non-coding RNA associated with transcripional start and end sites of protein coding genes. This occurs at some low level for many protein coding genes.


go_id: GO:0098791
term: Golgi subcompartment
ontology: CC
definition:
A compartment that consists of a lumen and an enclosing membrane, and is part of the Golgi Apparatus.


go_id: GO:0098792
term: xenophagy
ontology: BP
definition:
The enclosure of a region of cytoplasm containing an intracellular pathogen or some part of intracellular pathogens (e.g. viral capsid) in a double membrane bound autophagosome, which then fuses with the lysosome leading to degradation of the contents.


go_id: GO:0098801
term: regulation of renal system process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of a system process, a multicellular organismal process carried out by the renal system.


go_id: GO:0098805
term: whole membrane
ontology: CC
definition:
Any lipid bilayer that completely encloses some structure, and all the proteins embedded in it or attached to it.  Examples include the plasma membrane and most organelle membranes.


go_id: GO:0098806
term: deadenylation involved in gene silencing by miRNA
ontology: BP
definition:
Shortening of the poly(A) tail of a nuclear-transcribed mRNA following miRNA binding to mRNA, resulting in destabilization of the mRNA and a reduction in the efficiency of its translation.


go_id: GO:0098810
term: neurotransmitter reuptake
ontology: BP
definition:
The uptake of neurotransmitters by neurons as part of synaptic transmission. This process leads to inactivation and recycling of neurotransmitters.


go_id: GO:0098811
term: transcriptional repressor activity, RNA polymerase II activating transcription factor binding
ontology: MF
definition:
Interacting selectively and non-covalently with an RNA polymerase II activating transcription factor and also with the RNA polymerase II basal transcription machinery in order to stop, prevent, or reduce the frequency, rate or extent of transcription.


go_id: GO:0098812
term: nuclear rRNA polyadenylation involved in polyadenylation-dependent rRNA catabolic process
ontology: BP
definition:
The enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end of a rRNA, occurring as part of the process of polyadenylation-dependent rRNA catabolism in the nucleus.


go_id: GO:0098813
term: nuclear chromosome segregation
ontology: BP
definition:
The process in which genetic material, in the form of nuclear chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets. Nuclear chromosome segregation begins with the condensation of chromosomes, includes chromosome separation, and ends when chromosomes have completed movement to the spindle poles.


go_id: GO:0098814
term: spontaneous synaptic transmission
ontology: BP
definition:
The low level of synaptic transmission that occurs via spontaneous neurotransmitter release into the synaptic cleft in the absence of a presynaptic action potential.


go_id: GO:0098815
term: modulation of excitatory postsynaptic potential
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of excitatory postsynaptic potential (EPSP). EPSP is a process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell. The flow of ions that causes an EPSP is an excitatory postsynaptic current (EPSC) and makes it easier for the neuron to fire an action potential.


go_id: GO:0098816
term: mini excitatory postsynaptic potential
ontology: BP
definition:
A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell, induced by the spontaneous release of a single vesicle of an excitatory neurotransmitter into the synapse.


go_id: GO:0098817
term: evoked excitatory postsynaptic potential
ontology: BP
definition:
A process that leads to a temporary increase in postsynaptic potential due to the flow of positively charged ions into the postsynaptic cell induced by the evoked release of many vesicles of exitatory neurotransmitter at the synapse.


go_id: GO:0098818
term: hyperpolarization of postsynaptic membrane
ontology: BP
definition:
A process that hyerpolarizes a postsynaptic membrane relative to its resting potential.  This has an inhibitory effect on the post-synaptic cell, moving the membrane potential away from the firing threshold.


go_id: GO:0098819
term: depolarization of postsynaptic membrane
ontology: BP
definition:
A process that depolarizes a postsynaptic membrane relative to its resting potential.  This has an excitatory effect on the post-synaptic cell, moving the membrane potential towards the firing threshold.


go_id: GO:0098820
term: trans-synaptic protein complex
ontology: CC
definition:
A protein complex that has one or more subunits that are integral to the presynaptic membrane and sone or more subunits that are integral to the postsynaptic membrane.


go_id: GO:0098821
term: BMP receptor activity
ontology: MF
definition:
Combining with a member of the bone morphogenetic protein (BMP) family, and transmitting a signal across the plasma membrane to initiate a change in cell activity.


go_id: GO:0098828
term: modulation of inihbitory postsynaptic potential
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of inhibitory postsynaptic potential (IPSP). IPSP is a temporary decrease in postsynaptic membrane potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential.


go_id: GO:0098830
term: presynaptic endosome
ontology: CC
definition:
An endosome present in the presynapse that fuses with endocytic vesicles arising in the presynaptic endocytic zone.  This organelle is believed to be involved in regeneration of synaptic vesicles.


go_id: GO:0098831
term: presynaptic active zone cytoplasmic component
ontology: CC
definition:
A specialized region below the presynaptic membrane, characterized by electron-dense material, a specialized cytoskeletal matrix and accumulated (associated) synaptic vesicles.


go_id: GO:0098832
term: peri-centrosomal recycling endosome
ontology: CC
definition:
A recycling endosome that is organized around the microtubule organizing center, close to the nucleus. This is the main recycling endosome of most cells. It receives input from the Golgi as well as recycled molecules from early endosomes.


go_id: GO:0098833
term: presynaptic endocytic zone
ontology: CC
definition:
A specialized region of the plasma membrane and underlying cytoplasm which surround the the active zone, into which synaptic vesicle membranes are recycled following exocytosis.  It is especially enriched in endocytic proteins following intense activity.


go_id: GO:0098835
term: presynaptic endocytic zone membrane
ontology: CC
definition:
The region of the presynaptic membrane that is part of the presynaptic endocytic zone - where synaptic vesicles are endocytosed and recycled following release.


go_id: GO:0098836
term: cytoskeleton of dendritic spine
ontology: CC
definition:
The portion of the cytoskeleton that lies within a dendritic spine.  The actin component of this cytoskeleton is involved in spine head remodelling in response to postsynaptic signalling.


go_id: GO:0098837
term: postsynaptic recycling endosome
ontology: CC
definition:
A recycling endosome of the postsynapse. In postsynaptic terminals with dendritic spines, it is typically located at the base of a dendritic spine. It is involved in recycling of neurotransmitter receptors to the postsynaptic membrane.  In some cases at least, this recycling is activated by postsynaptic signalling and so can play a role in long term potentiation.


go_id: GO:0098838
term: reduced folate transmembrane transport
ontology: BP
definition:
The directed movement of reduced folate (dihydrofolate, tetrahydrofolate, methylene-tetrahydrofolate or methyl-tetrahydrofolate) across a membrane.


go_id: GO:0098841
term: protein localization to cell division site after cytokinesis
ontology: BP
definition:
A cellular protein localization process in which a protein is transported to, or maintained at, the site of cell division following cytokinesis.


go_id: GO:0098842
term: postsynaptic early endosome
ontology: CC
definition:
An early endosome of the postsynapse. It acts as the major sorting station on the endocytic pathway, targetting neurotransmitter receptors for degregation or recycling.


go_id: GO:0098843
term: postsynaptic endocytic zone
ontology: CC
definition:
A stably positioned site of clathrin adjacent and physically attached to the postsynaptic density, which is the a site of endocytosis of post-synaptic proteins.


go_id: GO:0098844
term: postsynaptic endocytic zone membrane
ontology: CC
definition:
The region of the postsynaptic membrane that is part of the postsynaptic endocytic zone.  This region of membrane is associated with stable clathrin puncta.


go_id: GO:0098845
term: postsynaptic endosome
ontology: CC
definition:
An endosomal compartment that is part of the post-synapse. Only early and recycling endosomes are typically present in the postsynapse.


go_id: GO:0098900
term: regulation of action potential
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.


go_id: GO:0098901
term: regulation of cardiac muscle cell action potential
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.


go_id: GO:0098902
term: regulation of membrane depolarization during action potential
ontology: BP
definition:
Any process that modulates the rate, frequency or extent of membrane depolarization during an action potential. Membrane depolarization is the process in which membrane potential changes in the depolarizing direction from the resting potential.


go_id: GO:0098903
term: regulation of membrane repolarization during action potential
ontology: BP
definition:
Any process that modulates the rate, frequency or extent of membrane repolarization during an action potential. Membrane repolarization is the process in which membrane potential changes in the repolarizing direction, towards the resting potential.


go_id: GO:0098904
term: regulation of AV node cell action potential
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an atrioventricular node myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.


go_id: GO:0098905
term: regulation of bundle of His cell action potential
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell of the bundle of His. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.


go_id: GO:0098906
term: regulation of Purkinje myocyte action potential
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a Purkinje myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.


go_id: GO:0098907
term: regulation of SA node cell action potential
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an SA node cardiac myocyte. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.


go_id: GO:0098908
term: regulation of neuronal action potential
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a neuron. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.


go_id: GO:0098909
term: regulation of cardiac muscle cell action potential involved in regulation of contraction
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell contributing to the regulation of its contraction.


go_id: GO:0098910
term: regulation of atrial cardiac muscle cell action potential
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in an atrial cardiac muscle cell contributing to the regulation of its contraction. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.


go_id: GO:0098911
term: regulation of ventricular cardiac muscle cell action potential
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a ventricular cardiac muscle cell contributing to the regulation of its contraction.  This typically occurs via modulation of the activity or expression of voltage-gated ion channels.


go_id: GO:0098912
term: membrane depolarization during atrial cardiac muscle cell action potential
ontology: BP
definition:
The process in which atrial cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.


go_id: GO:0098913
term: membrane depolarization during ventricular cardiac muscle cell action potential
ontology: BP
definition:
The process in which ventricular cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.


go_id: GO:0098914
term: membrane repolarization during atrial cardiac muscle cell action potential
ontology: BP
definition:
The process in which ions are transported across a membrane such that the atrial cardiomyocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.


go_id: GO:0098915
term: membrane repolarization during ventricular cardiac muscle cell action potential
ontology: BP
definition:
The process in which ions are transported across a membrane such that the ventricular cardiomyocyte membrane potential changes in the direction from the positive membrane potential at the peak of the action potential towards the negative resting potential.


go_id: GO:0099587
term: inorganic ion import into cell
ontology: BP
definition:
The directed movement of inorganic ions from outside of a cell into the cytoplasmic compartment. This may occur via transport across the plasma membrane or via endocytosis.


go_id: GO:0100003
term: positive regulation of sodium ion transport by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that positively_regulates sodium ion transport


go_id: GO:0100004
term: positive regulation of peroxisome organization by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that positively_regulates peroxisome organization


go_id: GO:0100005
term: positive regulation of ethanol catabolic process by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that positively_regulates ethanol catabolic process


go_id: GO:0100006
term: positive regulation of sulfite transport by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that positively_regulates sulfite transport


go_id: GO:0100007
ontology: BP
term:
negative regulation of ceramide biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates ceramide biosynthetic process


go_id: GO:0100013
term: positive regulation of fatty acid beta-oxidation by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that positively_regulates fatty acid beta-oxidation


go_id: GO:0100014
term: positive regulation of mating type switching by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that positively_regulates mating type switching


go_id: GO:0100015
ontology: BP
term:
positive regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that positively_regulates inositol biosynthetic process


go_id: GO:0100016
term: regulation of thiamine biosynthetic process by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that regulates thiamine biosynthetic process


go_id: GO:0100017
term: negative regulation of cell-cell adhesion by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates single organismal cell-cell adhesion


go_id: GO:0100024
term: regulation of carbohydrate metabolic process by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that regulates carbohydrate metabolic process


go_id: GO:0100025
ontology: BP
term:
negative regulation of cellular amino acid biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates cellular amino acid biosynthetic process


go_id: GO:0100027
term: regulation of cell separation after cytokinesis by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that regulates cell separation after cytokinesis


go_id: GO:0100028
term: regulation of conjugation with cellular fusion by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that regulates conjugation with cellular fusion


go_id: GO:0100032
ontology: BP
term:
positive regulation of phospholipid biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that positively_regulates phospholipid biosynthetic process


go_id: GO:0100033
term: regulation of fungal-type cell wall biogenesis by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that regulates fungal-type cell wall biogenesis


go_id: GO:0100034
ontology: BP
term:
regulation of 4,6-pyruvylated galactose residue biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that regulates 4,6-pyruvylated galactose residue biosynthetic process


go_id: GO:0100035
term: negative regulation of transmembrane transport by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates transmembrane transport


go_id: GO:0100036
ontology: BP
term:
positive regulation of purine nucleotide biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that positively_regulates purine nucleotide biosynthetic process


go_id: GO:0100037
ontology: BP
term:
positive regulation of cellular alcohol catabolic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that positively_regulates cellular alcohol catabolic process


go_id: GO:0100038
ontology: BP
term:
regulation of cellular response to oxidative stress by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that regulates cellular response to oxidative stress


go_id: GO:0100039
ontology: BP
term:
regulation of pyrimidine nucleotide biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that regulates pyrimidine nucleotide biosynthetic process


go_id: GO:0100040
ontology: BP
term:
negative regulation of invasive growth in response to glucose limitation by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates invasive growth in response to glucose limitation


go_id: GO:0100041
term: positive regulation of pseudohyphal growth by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that positively_regulates pseudohyphal growth


go_id: GO:0100042
term: negative regulation of pseudohyphal growth by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates pseudohyphal growth


go_id: GO:0100043
ontology: BP
term:
negative regulation of cellular response to alkaline pH by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates cellular response to alkaline pH


go_id: GO:0100044
ontology: BP
term:
negative regulation of cellular hyperosmotic salinity response by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates cellular hyperosmotic salinity response


go_id: GO:0100045
term: negative regulation of arginine catabolic process by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates arginine catabolic process


go_id: GO:0100046
ontology: BP
term:
positive regulation of arginine biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that positively_regulates arginine biosynthetic process


go_id: GO:0100047
ontology: BP
term:
negative regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates inositol biosynthetic process


go_id: GO:0100048
ontology: BP
term:
positive regulation of phosphatidylcholine biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that positively_regulates phosphatidylcholine biosynthetic process


go_id: GO:0100049
ontology: BP
term:
negative regulation of phosphatidylcholine biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates phosphatidylcholine biosynthetic process


go_id: GO:0100050
term: negative regulation of mating type switching by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates mating type switching


go_id: GO:0100051
term: positive regulation of meiotic nuclear division by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that positively_regulates meiotic nuclear division


go_id: GO:0100052
ontology: BP
term:
negative regulation of G1/S transition of mitotic cell cycle by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates G1/S transition of mitotic cell cycle


go_id: GO:0100053
term: positive regulation of sulfate assimilation by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that positively_regulates sulfate assimilation


go_id: GO:0100054
ontology: BP
term:
positive regulation of flocculation via cell wall protein-carbohydrate interaction by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that positively_regulates flocculation via cell wall protein-carbohydrate interaction


go_id: GO:0100055
ontology: BP
term:
positive regulation of phosphatidylserine biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that positively_regulates phosphatidylserine biosynthetic process


go_id: GO:0100056
ontology: BP
term:
negative regulation of phosphatidylserine biosynthetic process by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates phosphatidylserine biosynthetic process


go_id: GO:0100058
term: positive regulation of phenotypic switching by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that positively_regulates phenotypic switching


go_id: GO:0100059
term: negative regulation of phenotypic switching by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates phenotypic switching


go_id: GO:0100061
term: negative regulation of SREBP signaling pathway by transcription factor catabolic process
ontology: BP
definition:
Any transcription factor catabolic process process that negatively_regulates SREBP signaling pathway


go_id: GO:0100062
term: positive regulation of SREBP signaling pathway by transcription factor catabolic process
ontology: BP
definition:
Any transcription factor catabolic process process that positively_regulates SREBP signaling pathway


go_id: GO:0100063
term: regulation of dipeptide transmembrane transport by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that regulates dipeptide transmembrane transport


go_id: GO:0100064
ontology: BP
term:
negative regulation of filamentous growth of a population of unicellular organisms in response to starvation by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates filamentous growth of a population of unicellular organisms in response to starvation


go_id: GO:0100066
ontology: BP
term:
negative regulation of induction of conjugation with cellular fusion by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates induction of conjugation with cellular fusion


go_id: GO:0100067
ontology: BP
term:
positive regulation of spinal cord association neuron differentiation by canonical Wnt signaling pathway

definition:
Any canonical Wnt signaling pathway process that positively_regulates spinal cord association neuron differentiation


go_id: GO:0100068
ontology: BP
term:
positive regulation of pyrimidine-containing compound salvage by transcription from RNA polymerase II promoter

definition:
Any transcription from RNA polymerase II promoter process that positively_regulates pyrimidine-containing compound salvage


go_id: GO:0100069
term: negative regulation of neuron apoptotic process by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that negatively_regulates neuron apoptotic process


go_id: GO:0100070
term: regulation of fatty acid biosynthetic process by transcription from RNA polymerase II promoter
ontology: BP
definition:
Any transcription from RNA polymerase II promoter process that regulates fatty acid biosynthetic process


go_id: GO:1900001
term: negative regulation of anthocyanin catabolic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of anthocyanin catabolic process.


go_id: GO:1900002
term: positive regulation of anthocyanin catabolic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of anthocyanin catabolic process.


go_id: GO:1900004
term: negative regulation of serine-type endopeptidase activity
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of serine-type endopeptidase activity.


go_id: GO:1900005
term: positive regulation of serine-type endopeptidase activity
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of serine-type endopeptidase activity.


go_id: GO:1900007
term: regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.


go_id: GO:1900008
term: negative regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.


go_id: GO:1900009
term: positive regulation of extrachromosomal rDNA circle accumulation involved in replicative cell aging
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of extrachromosomal rDNA circle accumulation involved in replicative cell aging.


go_id: GO:1900010
term: regulation of corticotropin-releasing hormone receptor activity
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of corticotropin-releasing hormone receptor activity.


go_id: GO:1900011
term: negative regulation of corticotropin-releasing hormone receptor activity
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of corticotropin-releasing hormone receptor activity.


go_id: GO:1900012
term: positive regulation of corticotropin-releasing hormone receptor activity
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of corticotropin-releasing hormone receptor activity.


go_id: GO:1900015
term: regulation of cytokine production involved in inflammatory response
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of cytokine production involved in inflammatory response.


go_id: GO:1900016
term: negative regulation of cytokine production involved in inflammatory response
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of cytokine production involved in inflammatory response.


go_id: GO:1900017
term: positive regulation of cytokine production involved in inflammatory response
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of cytokine production involved in inflammatory response.


go_id: GO:1900018
ontology: BP
term:
phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex

definition:
Any phosphorylation of RNA polymerase II C-terminal domain serine 5 residues that is involved in recruitment of mRNA capping enzyme to RNA polymerase II holoenzyme complex.


go_id: GO:1900023
term: positive regulation of D-erythro-sphingosine kinase activity
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of D-erythro-sphingosine kinase activity.


go_id: GO:1900024
term: regulation of substrate adhesion-dependent cell spreading
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of substrate adhesion-dependent cell spreading.


go_id: GO:1900025
term: negative regulation of substrate adhesion-dependent cell spreading
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of substrate adhesion-dependent cell spreading.


go_id: GO:1900026
term: positive regulation of substrate adhesion-dependent cell spreading
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of substrate adhesion-dependent cell spreading.


go_id: GO:1900621
term: regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling
ontology: BP
definition:
Calcium-mediated signaling that results in regulation of transcription from an RNA polymerase II promoter.


go_id: GO:1900035
term: negative regulation of cellular response to heat
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to heat.


go_id: GO:1900038
term: negative regulation of cellular response to hypoxia
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to hypoxia.


go_id: GO:1900039
term: positive regulation of cellular response to hypoxia
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of cellular response to hypoxia.


go_id: GO:1900041
term: negative regulation of interleukin-2 secretion
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-2 secretion.


go_id: GO:1900045
term: negative regulation of protein K63-linked ubiquitination
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of protein K63-linked ubiquitination.


go_id: GO:1900053
term: negative regulation of retinoic acid biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of retinoic acid biosynthetic process.


go_id: GO:1900054
term: positive regulation of retinoic acid biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of retinoic acid biosynthetic process.


go_id: GO:1900060
term: negative regulation of ceramide biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of a ceramide biosynthetic process.


go_id: GO:1900622
term: positive regulation of transcription from RNA polymerase II promoter by calcium-mediated signaling
ontology: BP
definition:
Calcium-mediated signaling that results in positive regulation of transcription from an RNA polymerase II promoter.


go_id: GO:1900068
term: negative regulation of cellular response to alkaline pH
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to alkalinity.


go_id: GO:1900069
term: regulation of cellular hyperosmotic salinity response
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of cellular hyperosmotic salinity response.


go_id: GO:1900070
term: negative regulation of cellular hyperosmotic salinity response
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of cellular hyperosmotic salinity response.


go_id: GO:1900074
term: negative regulation of neuromuscular synaptic transmission
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of neuromuscular synaptic transmission.


go_id: GO:1900075
term: positive regulation of neuromuscular synaptic transmission
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of neuromuscular synaptic transmission.


go_id: GO:1900077
term: negative regulation of cellular response to insulin stimulus
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to insulin stimulus.


go_id: GO:1900078
term: positive regulation of cellular response to insulin stimulus
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of cellular response to insulin stimulus.


go_id: GO:1900080
term: positive regulation of arginine biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of arginine biosynthetic process.


go_id: GO:1900082
term: negative regulation of arginine catabolic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of arginine catabolic process.


go_id: GO:1900085
term: negative regulation of peptidyl-tyrosine autophosphorylation
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of peptidyl-tyrosine autophosphorylation.


go_id: GO:1900086
term: positive regulation of peptidyl-tyrosine autophosphorylation
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of peptidyl-tyrosine autophosphorylation.


go_id: GO:1900087
term: positive regulation of G1/S transition of mitotic cell cycle
ontology: BP
definition:
Any cell cycle regulatory process that promotes the commitment of a cell from G1 to S phase of the mitotic cell cycle.


go_id: GO:1900089
term: negative regulation of inositol biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of inositol biosynthetic process.


go_id: GO:1900090
term: positive regulation of inositol biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of inositol biosynthetic process.


go_id: GO:1900092
term: negative regulation of raffinose biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of raffinose biosynthetic process.


go_id: GO:1900093
term: positive regulation of raffinose biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of raffinose biosynthetic process.


go_id: GO:1900094
ontology: BP
term:
regulation of transcription from RNA polymerase II promoter involved in determination of left/right symmetry

definition:
Any regulation of transcription from RNA polymerase II promoter that is involved in determination of left/right symmetry.


go_id: GO:1900095
term: regulation of dosage compensation by inactivation of X chromosome
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of dosage compensation, by inactivation of X chromosome.


go_id: GO:1900096
term: negative regulation of dosage compensation by inactivation of X chromosome
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of dosage compensation, by inactivation of X chromosome.


go_id: GO:1900097
term: positive regulation of dosage compensation by inactivation of X chromosome
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of dosage compensation, by inactivation of X chromosome.


go_id: GO:1900099
term: negative regulation of plasma cell differentiation
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of plasma cell differentiation.


go_id: GO:1900100
term: positive regulation of plasma cell differentiation
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of plasma cell differentiation.


go_id: GO:1900101
term: regulation of endoplasmic reticulum unfolded protein response
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of endoplasmic reticulum unfolded protein response.


go_id: GO:1900102
term: negative regulation of endoplasmic reticulum unfolded protein response
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of endoplasmic reticulum unfolded protein response.


go_id: GO:1900103
term: positive regulation of endoplasmic reticulum unfolded protein response
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of endoplasmic reticulum unfolded protein response.


go_id: GO:1900105
term: negative regulation of hyaluranon cable assembly
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of hyaluranon cable assembly.


go_id: GO:1900108
term: negative regulation of nodal signaling pathway
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of nodal signaling pathway.


go_id: GO:1900110
term: negative regulation of histone H3-K9 dimethylation
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K9 dimethylation.


go_id: GO:1900111
term: positive regulation of histone H3-K9 dimethylation
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of histone H3-K9 dimethylation.


go_id: GO:1900113
term: negative regulation of histone H3-K9 trimethylation
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K9 trimethylation.


go_id: GO:1900114
term: positive regulation of histone H3-K9 trimethylation
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of histone H3-K9 trimethylation.


go_id: GO:1900118
term: negative regulation of execution phase of apoptosis
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of execution phase of apoptosis.


go_id: GO:1900119
term: positive regulation of execution phase of apoptosis
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of execution phase of apoptosis.


go_id: GO:1900120
term: regulation of receptor binding
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of a protein or other molecule binding to a receptor.


go_id: GO:1900121
term: negative regulation of receptor binding
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of a protein or other molecule binding to a receptor.


go_id: GO:1900122
term: positive regulation of receptor binding
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of a protein or other molecule binding to a receptor.


go_id: GO:1900124
term: negative regulation of nodal receptor complex assembly
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of nodal receptor complex assembly.


go_id: GO:1900126
term: negative regulation of hyaluronan biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of hyaluronan biosynthetic process.


go_id: GO:1900127
term: positive regulation of hyaluronan biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of hyaluronan biosynthetic process.


go_id: GO:1900128
term: regulation of G-protein activated inward rectifier potassium channel activity
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of G-protein activated inward rectifier potassium channel activity.


go_id: GO:1900129
term: positive regulation of G-protein activated inward rectifier potassium channel activity
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of G-protein activated inward rectifier potassium channel activity.


go_id: GO:1900134
term: negative regulation of renin secretion into blood stream
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of renin secretion into blood stream.


go_id: GO:1900135
term: positive regulation of renin secretion into blood stream
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of renin secretion into blood stream.


go_id: GO:1900138
term: negative regulation of phospholipase A2 activity
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase A2 activity.


go_id: GO:1900139
term: negative regulation of arachidonic acid secretion
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of arachidonic acid secretion.


go_id: GO:1900142
term: negative regulation of oligodendrocyte apoptotic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of oligodendrocyte apoptotic process.


go_id: GO:1900143
term: positive regulation of oligodendrocyte apoptotic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of oligodendrocyte apoptotic process.


go_id: GO:1900145
term: regulation of nodal signaling pathway involved in determination of left/right asymmetry
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry.


go_id: GO:1900146
term: negative regulation of nodal signaling pathway involved in determination of left/right asymmetry
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry.


go_id: GO:1900148
term: negative regulation of Schwann cell migration
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of Schwann cell migration.


go_id: GO:1900151
term: regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.


go_id: GO:1900152
term: negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.


go_id: GO:1900153
term: positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.


go_id: GO:1900155
term: negative regulation of bone trabecula formation
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of bone trabecula formation.


go_id: GO:1900157
term: regulation of bone mineralization involved in bone maturation
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of bone mineralization involved in bone maturation.


go_id: GO:1900158
term: negative regulation of bone mineralization involved in bone maturation
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of bone mineralization involved in bone maturation.


go_id: GO:1900159
term: positive regulation of bone mineralization involved in bone maturation
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of bone mineralization involved in bone maturation.


go_id: GO:1900160
term: plastid DNA packaging
ontology: BP
definition:
Any process in which plastidial DNA and associated proteins are formed into a compact, orderly structure.


go_id: GO:1900162
term: negative regulation of phospholipid scramblase activity
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of phospholipid scramblase activity.


go_id: GO:1900163
term: positive regulation of phospholipid scramblase activity
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of phospholipid scramblase activity.


go_id: GO:1900165
term: negative regulation of interleukin-6 secretion
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-6 secretion.


go_id: GO:1900166
term: regulation of glial cell-derived neurotrophic factor secretion
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of glial cell-derived neurotrophic factor secretion.


go_id: GO:1900167
term: negative regulation of glial cell-derived neurotrophic factor secretion
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of glial cell-derived neurotrophic factor secretion.


go_id: GO:1900168
term: positive regulation of glial cell-derived neurotrophic factor secretion
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of glial cell-derived neurotrophic factor secretion.


go_id: GO:1900169
term: regulation of glucocorticoid mediated signaling pathway
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of glucocorticoid mediated signaling pathway.


go_id: GO:1900170
term: negative regulation of glucocorticoid mediated signaling pathway
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of glucocorticoid mediated signaling pathway.


go_id: GO:1900171
term: positive regulation of glucocorticoid mediated signaling pathway
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of glucocorticoid mediated signaling pathway.


go_id: GO:1900176
ontology: BP
term:
negative regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry

definition:
Any process that stops, prevents or reduces the frequency, rate or extent of a nodal signaling pathway, where the nodal signaling pathway is involved in determination of left/right asymmetry in the lateral mesoderm.


go_id: GO:1900178
term: negative regulation of aflatoxin biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of aflatoxin biosynthetic process.


go_id: GO:1900179
term: positive regulation of aflatoxin biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of aflatoxin biosynthetic process.


go_id: GO:1900181
term: negative regulation of protein localization to nucleus
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleus.


go_id: GO:1900182
term: positive regulation of protein localization to nucleus
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of protein localization to nucleus.


go_id: GO:1900183
term: regulation of xanthone-containing compound biosynthetic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of xanthone-containing compound biosynthetic process.


go_id: GO:1900184
term: negative regulation of xanthone-containing compound biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of xanthone-containing compound biosynthetic process.


go_id: GO:1900185
term: positive regulation of xanthone-containing compound biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of xanthone-containing compound biosynthetic process.


go_id: GO:1900186
term: negative regulation of clathrin-mediated endocytosis
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of clathrin-mediated endocytosis.


go_id: GO:1900187
term: regulation of cell adhesion involved in single-species biofilm formation
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.


go_id: GO:1900188
term: negative regulation of cell adhesion involved in single-species biofilm formation
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.


go_id: GO:1900189
term: positive regulation of cell adhesion involved in single-species biofilm formation
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of cell adhesion involved in single-species biofilm formation.


go_id: GO:1900191
term: negative regulation of single-species biofilm formation
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation.


go_id: GO:1900192
term: positive regulation of single-species biofilm formation
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of single-species biofilm formation.


go_id: GO:1900197
term: negative regulation of penicillin biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of penicillin biosynthetic process.


go_id: GO:1900198
term: positive regulation of penicillin biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of penicillin biosynthetic process.


go_id: GO:1900199
term: positive regulation of protein export from nucleus during meiotic anaphase II
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm, during anaphase occurring as part of meiosis II.


go_id: GO:1900207
term: negative regulation of pronephric nephron tubule development
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of pronephric nephron tubule development.


go_id: GO:1900209
term: negative regulation of cardiolipin metabolic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of cardiolipin metabolic process.


go_id: GO:1900210
term: positive regulation of cardiolipin metabolic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of cardiolipin metabolic process.


go_id: GO:1900211
term: regulation of mesenchymal cell apoptotic process involved in metanephros development
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of mesenchymal cell apoptotic process involved in metanephros development.


go_id: GO:1900212
term: negative regulation of mesenchymal cell apoptotic process involved in metanephros development
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of mesenchymal cell apoptotic process involved in metanephros development.


go_id: GO:1900213
term: positive regulation of mesenchymal cell apoptotic process involved in metanephros development
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of mesenchymal cell apoptotic process involved in metanephros development.


go_id: GO:1900214
term: regulation of apoptotic process involved in metanephric collecting duct development
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of apoptotic process involved in metanephric collecting duct development.


go_id: GO:1900215
term: negative regulation of apoptotic process involved in metanephric collecting duct development
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in metanephric collecting duct development.


go_id: GO:1900216
term: positive regulation of apoptotic process involved in metanephric collecting duct development
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of apoptotic process involved in metanephric collecting duct development.


go_id: GO:1900217
term: regulation of apoptotic process involved in metanephric nephron tubule development
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of apoptotic process involved in metanephric nephron tubule development.


go_id: GO:1900218
term: negative regulation of apoptotic process involved in metanephric nephron tubule development
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in metanephric nephron tubule development.


go_id: GO:1900219
term: positive regulation of apoptotic process involved in metanephric nephron tubule development
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of apoptotic process involved in metanephric nephron tubule development.


go_id: GO:1900222
term: negative regulation of beta-amyloid clearance
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of beta-amyloid clearance.


go_id: GO:1900224
ontology: BP
term:
positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry

definition:
Any process that activates or increases the frequency, rate or extent of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry.


go_id: GO:1900226
term: negative regulation of NLRP3 inflammasome complex assembly
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of NLRP3 inflammasome complex assembly.


go_id: GO:1900227
term: positive regulation of NLRP3 inflammasome complex assembly
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of NLRP3 inflammasome complex assembly.


go_id: GO:1900228
term: regulation of single-species biofilm formation in or on host organism
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of single-species biofilm formation in or on host organism.


go_id: GO:1900229
term: negative regulation of single-species biofilm formation in or on host organism
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation in or on host organism.


go_id: GO:1900230
term: positive regulation of single-species biofilm formation in or on host organism
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of single-species biofilm formation in or on host organism.


go_id: GO:1900231
term: regulation of single-species biofilm formation on inanimate substrate
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of single-species biofilm formation on inanimate substrate.


go_id: GO:1900232
term: negative regulation of single-species biofilm formation on inanimate substrate
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of single-species biofilm formation on inanimate substrate.


go_id: GO:1900233
term: positive regulation of single-species biofilm formation on inanimate substrate
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of single-species biofilm formation on inanimate substrate.


go_id: GO:1900237
term: positive regulation of induction of conjugation with cellular fusion
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of induction of conjugation with cellular fusion.


go_id: GO:1900238
ontology: BP
term:
regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway

definition:
Any process that modulates the frequency, rate or extent of regulation of metanephric mesenchymal cell migration, by platelet-derived growth factor receptor-beta signaling pathway.


go_id: GO:1900243
term: negative regulation of synaptic vesicle endocytosis
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of synaptic vesicle endocytosis.


go_id: GO:1900244
term: positive regulation of synaptic vesicle endocytosis
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of synaptic vesicle endocytosis.


go_id: GO:1900248
term: negative regulation of cytoplasmic translational elongation
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational elongation.


go_id: GO:1900249
term: positive regulation of cytoplasmic translational elongation
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of cytoplasmic translational elongation.


go_id: GO:1900257
term: negative regulation of beta1-adrenergic receptor activity
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of beta1-adrenergic receptor activity.


go_id: GO:1900258
term: positive regulation of beta1-adrenergic receptor activity
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of beta1-adrenergic receptor activity.


go_id: GO:1900260
term: negative regulation of RNA-directed RNA polymerase activity
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of RNA-directed RNA polymerase activity.


go_id: GO:1900261
term: positive regulation of RNA-directed RNA polymerase activity
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of RNA-directed RNA polymerase activity.


go_id: GO:1900263
term: negative regulation of DNA-directed DNA polymerase activity
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of DNA-directed DNA polymerase activity.


go_id: GO:1900264
term: positive regulation of DNA-directed DNA polymerase activity
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of DNA-directed DNA polymerase activity.


go_id: GO:1900266
term: negative regulation of substance P receptor binding
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of substance P receptor binding.


go_id: GO:1900267
term: positive regulation of substance P receptor binding
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of substance P receptor binding.


go_id: GO:1900272
term: negative regulation of long-term synaptic potentiation
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of long-term synaptic potentiation.


go_id: GO:1900273
term: positive regulation of long-term synaptic potentiation
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of long-term synaptic potentiation.


go_id: GO:1900275
term: negative regulation of phospholipase C activity
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of phospholipase C activity.


go_id: GO:1900277
term: negative regulation of proteinase activated receptor activity
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of proteinase activated receptor activity.


go_id: GO:1900278
term: positive regulation of proteinase activated receptor activity
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of proteinase activated receptor activity.


go_id: GO:1900279
term: regulation of CD4-positive, alpha-beta T cell costimulation
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of CD4-positive, alpha-beta T cell costimulation.


go_id: GO:1900280
term: negative regulation of CD4-positive, alpha-beta T cell costimulation
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of CD4-positive, alpha-beta T cell costimulation.


go_id: GO:1900281
term: positive regulation of CD4-positive, alpha-beta T cell costimulation
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of CD4-positive, alpha-beta T cell costimulation.


go_id: GO:1900283
term: negative regulation of cellobiose catabolic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of cellobiose catabolic process.


go_id: GO:1900284
term: positive regulation of cellobiose catabolic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of cellobiose catabolic process.


go_id: GO:1900288
term: regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.


go_id: GO:1900289
term: negative regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.


go_id: GO:1900290
term: positive regulation of coenzyme F420-dependent bicyclic nitroimidazole catabolic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of coenzyme F420-dependent bicyclic nitroimidazole catabolic process.


go_id: GO:1900292
term: negative regulation of galactotriose transport
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of galactotriose transport.


go_id: GO:1900295
term: negative regulation of heptasaccharide transport
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of heptasaccharide transport.


go_id: GO:1900298
term: negative regulation of hexasaccharide transport
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of hexasaccharide transport.


go_id: GO:1900301
term: negative regulation of laminarabiose transport
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of laminarabiose transport.


go_id: GO:1900304
term: negative regulation of laminaritriose transport
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of laminaritriose transport.


go_id: GO:1900307
term: negative regulation of maltoheptaose transport
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of maltoheptaose transport.


go_id: GO:1900310
term: negative regulation of maltoheptaose metabolic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of maltoheptaose metabolic process.


go_id: GO:1900311
term: positive regulation of maltoheptaose metabolic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of maltoheptaose metabolic process.


go_id: GO:1900313
term: negative regulation of maltohexaose transport
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of maltohexaose transport.


go_id: GO:1900316
term: negative regulation of maltopentaose transport
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of maltopentaose transport.


go_id: GO:1900318
term: regulation of methane biosynthetic process from dimethylamine
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of methane biosynthetic process from dimethylamine.


go_id: GO:1900319
term: negative regulation of methane biosynthetic process from dimethylamine
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from dimethylamine.


go_id: GO:1900320
term: positive regulation of methane biosynthetic process from dimethylamine
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from dimethylamine.


go_id: GO:1900322
term: negative regulation of maltotetraose transport
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of maltotetraose transport.


go_id: GO:1900325
term: negative regulation of maltotriulose transport
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of maltotriulose transport.


go_id: GO:1900330
term: regulation of methane biosynthetic process from trimethylamine
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of methane biosynthetic process from trimethylamine.


go_id: GO:1900331
term: negative regulation of methane biosynthetic process from trimethylamine
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from trimethylamine.


go_id: GO:1900332
term: positive regulation of methane biosynthetic process from trimethylamine
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from trimethylamine.


go_id: GO:1900333
term: regulation of methane biosynthetic process from 3-(methylthio)propionic acid
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of methane biosynthetic process from 3-(methylthio)propionic acid.


go_id: GO:1900334
term: negative regulation of methane biosynthetic process from 3-(methylthio)propionic acid
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from 3-(methylthio)propionic acid.


go_id: GO:1900335
term: positive regulation of methane biosynthetic process from 3-(methylthio)propionic acid
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from 3-(methylthio)propionic acid.


go_id: GO:1900336
term: regulation of methane biosynthetic process from carbon monoxide
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of methane biosynthetic process from carbon monoxide.


go_id: GO:1900337
term: negative regulation of methane biosynthetic process from carbon monoxide
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from carbon monoxide.


go_id: GO:1900338
term: positive regulation of methane biosynthetic process from carbon monoxide
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from carbon monoxide.


go_id: GO:1900339
term: regulation of methane biosynthetic process from formic acid
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of methane biosynthetic process from formic acid.


go_id: GO:1900340
term: negative regulation of methane biosynthetic process from formic acid
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from formic acid.


go_id: GO:1900341
term: positive regulation of methane biosynthetic process from formic acid
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from formic acid.


go_id: GO:1900342
term: regulation of methane biosynthetic process from dimethyl sulfide
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.


go_id: GO:1900343
term: negative regulation of methane biosynthetic process from dimethyl sulfide
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.


go_id: GO:1900344
term: positive regulation of methane biosynthetic process from dimethyl sulfide
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from dimethyl sulfide.


go_id: GO:1900345
term: regulation of methane biosynthetic process from methanethiol
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of methane biosynthetic process from methanethiol.


go_id: GO:1900346
term: negative regulation of methane biosynthetic process from methanethiol
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from methanethiol.


go_id: GO:1900347
term: positive regulation of methane biosynthetic process from methanethiol
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from methanethiol.


go_id: GO:1900348
term: regulation of methane biosynthetic process from methylamine
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of methane biosynthetic process from methylamine.


go_id: GO:1900349
term: negative regulation of methane biosynthetic process from methylamine
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from methylamine.


go_id: GO:1900350
term: positive regulation of methane biosynthetic process from methylamine
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from methylamine.


go_id: GO:1900352
term: negative regulation of methanofuran biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of methanofuran biosynthetic process.


go_id: GO:1900353
term: positive regulation of methanofuran biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of methanofuran biosynthetic process.


go_id: GO:1900355
term: negative regulation of methanofuran metabolic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of methanofuran metabolic process.


go_id: GO:1900356
term: positive regulation of methanofuran metabolic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of methanofuran metabolic process.


go_id: GO:1900358
term: negative regulation of nigerotriose transport
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of nigerotriose transport.


go_id: GO:1900361
term: negative regulation of pentasaccharide transport
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of pentasaccharide transport.


go_id: GO:1900366
term: negative regulation of defense response to insect
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of defense response to insect.


go_id: GO:1900367
term: positive regulation of defense response to insect
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of defense response to insect.


go_id: GO:1900371
term: regulation of purine nucleotide biosynthetic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of purine nucleotide biosynthetic processes.


go_id: GO:1900372
term: negative regulation of purine nucleotide biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of purine nucleotide biosynthetic processes.


go_id: GO:1900373
term: positive regulation of purine nucleotide biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of purine nucleotide biosynthetic processes.


go_id: GO:1900374
ontology: BP
term:
positive regulation of mating type switching by regulation of transcription from RNA polymerase II promoter

definition:
A regulation of transcription from RNA polymerase II promoter that results in positive regulation of mating type switching.


go_id: GO:1900375
ontology: BP
term:
positive regulation of inositol biosynthetic process by positive regulation of transcription from RNA polymerase II promoter

definition:
A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of inositol biosynthetic process.


go_id: GO:1900376
term: regulation of secondary metabolite biosynthetic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of secondary metabolite biosynthetic process.


go_id: GO:1900377
term: negative regulation of secondary metabolite biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of secondary metabolite biosynthetic process.


go_id: GO:1900378
term: positive regulation of secondary metabolite biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of secondary metabolite biosynthetic process.


go_id: GO:1900380
term: negative regulation of asperthecin biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of asperthecin biosynthetic process.


go_id: GO:1900381
term: positive regulation of asperthecin biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of asperthecin biosynthetic process.


go_id: GO:1900382
ontology: BP
term:
regulation of thiamine biosynthetic process by regulation of transcription from RNA polymerase II promoter

definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of thiamine biosynthetic process.


go_id: GO:1900383
term: regulation of synaptic plasticity by receptor localization to synapse
ontology: BP
definition:
Any process that modulates synaptic plasticity, the ability of synapses to change as circumstances require, via receptor localization to the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell. Processes may include receptor transport to, and/or maintenance at, the synapse.


go_id: GO:1900385
term: negative regulation of flavonol biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of flavonol biosynthetic process.


go_id: GO:1900386
term: positive regulation of flavonol biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of flavonol biosynthetic process.


go_id: GO:1900387
ontology: BP
term:
negative regulation of cell-cell adhesion by negative regulation of transcription from RNA polymerase II promoter

definition:
A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cell-cell adhesion.


go_id: GO:1900389
term: regulation of glucose import by regulation of transcription from RNA polymerase II promoter
ontology: BP
definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of glucose import.


go_id: GO:1900391
ontology: BP
term:
regulation of cAMP-mediated signaling by regulation of transcription from RNA polymerase II promoter

definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of cAMP-mediated signaling.


go_id: GO:1900392
term: regulation of transport by negative regulation of transcription from RNA polymerase II promoter
ontology: BP
definition:
A negative regulation of transcription from RNA polymerase II promoter that results in regulation of transport.


go_id: GO:1900393
term: regulation of iron ion transport by regulation of transcription from RNA polymerase II promoter
ontology: BP
definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of iron ion transport.


go_id: GO:1900395
term: negative regulation of kojic acid biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of kojic acid biosynthetic process.


go_id: GO:1900396
term: positive regulation of kojic acid biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of kojic acid biosynthetic process.


go_id: GO:1900397
term: regulation of pyrimidine nucleotide biosynthetic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of pyrimidine nucleotide biosynthetic process.


go_id: GO:1900398
term: negative regulation of pyrimidine nucleotide biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of pyrimidine nucleotide biosynthetic process.


go_id: GO:1900399
term: positive regulation of pyrimidine nucleotide biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of pyrimidine nucleotide biosynthetic process.


go_id: GO:1900400
term: regulation of iron ion import by regulation of transcription from RNA polymerase II promoter
ontology: BP
definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of iron ion import.


go_id: GO:1900401
term: regulation of meiosis by regulation of transcription from RNA polymerase II promoter
ontology: BP
definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of meiosis.


go_id: GO:1900402
ontology: BP
term:
regulation of carbohydrate metabolic process by regulation of transcription from RNA polymerase II promoter

definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of carbohydrate metabolic process.


go_id: GO:1900403
ontology: BP
term:
negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter

definition:
A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cellular amino acid biosynthetic process.


go_id: GO:1900404
ontology: BP
term:
positive regulation of DNA repair by positive regulation of transcription from RNA polymerase II promoter

definition:
A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of DNA repair.


go_id: GO:1900405
ontology: BP
term:
regulation of cell separation after cytokinesis by regulation of transcription from RNA polymerase II promoter

definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of  cell separation after cytokinesis.


go_id: GO:1900406
ontology: BP
term:
regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter

definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of conjugation with cellular fusion.


go_id: GO:1900408
term: negative regulation of cellular response to oxidative stress
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to oxidative stress.


go_id: GO:1900409
term: positive regulation of cellular response to oxidative stress
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of cellular response to oxidative stress.


go_id: GO:1900410
term: regulation of histone modification by regulation of transcription from RNA polymerase II promoter
ontology: BP
definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of histone modification.


go_id: GO:1900411
term: regulation of histone acetylation by regulation of transcription from RNA polymerase II promoter
ontology: BP
definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of histone acetylation.


go_id: GO:1900412
term: regulation of histone methylation by regulation of transcription from RNA polymerase II promoter
ontology: BP
definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of histone methylation.


go_id: GO:1900413
ontology: BP
term:
positive regulation of phospholipid biosynthetic process by positive regulation of transcription from RNA polymerase II promoter

definition:
A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of phospholipid biosynthetic process.


go_id: GO:1900414
term: regulation of cytokinesis by regulation of transcription from RNA polymerase II promoter
ontology: BP
definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of cytokinesis.


go_id: GO:1900415
ontology: BP
term:
regulation of fungal-type cell wall biogenesis by regulation of transcription from RNA polymerase II promoter

definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of fungal-type cell wall biogenesis.


go_id: GO:1900416
ontology: BP
term:
regulation of 4,6-pyruvylated galactose residue biosynthetic process by regulation of transcription from RNA polymerase II promoter

definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of 4,6-pyruvylated galactose residue biosynthetic process.


go_id: GO:1900417
ontology: BP
term:
negative regulation of transmembrane transport by negative regulation of transcription from RNA polymerase II promoter

definition:
A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of transmembrane transport.


go_id: GO:1900418
ontology: BP
term:
positive regulation of purine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter

definition:
A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of purine nucleotide biosynthetic process.


go_id: GO:1900420
term: negative regulation of cellular alcohol catabolic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of cellular alcohol catabolic process.


go_id: GO:1900421
term: positive regulation of cellular alcohol catabolic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of cellular alcohol catabolic process.


go_id: GO:1900422
ontology: BP
term:
positive regulation of cellular alcohol catabolic process by positive regulation of transcription from RNA polymerase II promoter

definition:
A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of cellular alcohol catabolic process.


go_id: GO:1900423
ontology: BP
term:
positive regulation of mating type switching by positive regulation of transcription from RNA polymerase II promoter

definition:
A positive regulation of transcription from RNA polymerase II promoter that results in positive regulation of mating type switching.


go_id: GO:1900425
term: negative regulation of defense response to bacterium
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of defense response to bacterium.


go_id: GO:1900426
term: positive regulation of defense response to bacterium
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of defense response to bacterium.


go_id: GO:1900427
ontology: BP
term:
regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter

definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of cellular response to oxidative stress.


go_id: GO:1900428
term: regulation of filamentous growth of a population of unicellular organisms
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms.


go_id: GO:1900429
term: negative regulation of filamentous growth of a population of unicellular organisms
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms.


go_id: GO:1900430
term: positive regulation of filamentous growth of a population of unicellular organisms
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms.


go_id: GO:1900431
term: regulation of filamentous growth of a population of unicellular organisms in response to heat
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to heat.


go_id: GO:1900432
ontology: BP
term:
negative regulation of filamentous growth of a population of unicellular organisms in response to heat

definition:
Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to heat.


go_id: GO:1900433
ontology: BP
term:
positive regulation of filamentous growth of a population of unicellular organisms in response to heat

definition:
Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to heat.


go_id: GO:1900434
term: regulation of filamentous growth of a population of unicellular organisms in response to starvation
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to starvation.


go_id: GO:1900435
ontology: BP
term:
negative regulation of filamentous growth of a population of unicellular organisms in response to starvation

definition:
Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to starvation.


go_id: GO:1900436
ontology: BP
term:
positive regulation of filamentous growth of a population of unicellular organisms in response to starvation

definition:
Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to starvation.


go_id: GO:1900437
ontology: BP
term:
regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus

definition:
Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.


go_id: GO:1900438
ontology: BP
term:
negative regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus

definition:
Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.


go_id: GO:1900439
ontology: BP
term:
positive regulation of filamentous growth of a population of unicellular organisms in response to chemical stimulus

definition:
Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to chemical stimulus.


go_id: GO:1900440
term: regulation of filamentous growth of a population of unicellular organisms in response to neutral pH
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.


go_id: GO:1900441
ontology: BP
term:
negative regulation of filamentous growth of a population of unicellular organisms in response to neutral pH

definition:
Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.


go_id: GO:1900442
ontology: BP
term:
positive regulation of filamentous growth of a population of unicellular organisms in response to neutral pH

definition:
Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to neutral pH.


go_id: GO:1900443
ontology: BP
term:
regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus

definition:
Any process that modulates the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.


go_id: GO:1900444
ontology: BP
term:
negative regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus

definition:
Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.


go_id: GO:1900445
ontology: BP
term:
positive regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus

definition:
Any process that activates or increases the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.


go_id: GO:1900446
term: negative regulation of tRNA transcription from RNA polymerase III promoter
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of tRNA transcription from RNA polymerase III promoter.


go_id: GO:1900447
term: regulation of cell morphogenesis involved in phenotypic switching
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of cell morphogenesis contributing a phenotypic switch. Cell morphogenesis involved in differentiation is the change in form (cell shape and size) that occurs when relatively unspecialized cells, such as the opaque cells of C. albicans, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism's life history.


go_id: GO:1900448
ontology: BP
term:
regulation of pyrimidine nucleotide biosynthetic process by positive regulation of transcription from RNA polymerase II promoter

definition:
Any process that modulates the frequency, rate or extent of pyrimidine nucleotide biosynthesis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900450
term: negative regulation of glutamate receptor signaling pathway
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of glutamate receptor signaling pathway.


go_id: GO:1900451
term: positive regulation of glutamate receptor signaling pathway
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of glutamate receptor signaling pathway.


go_id: GO:1900453
term: negative regulation of long term synaptic depression
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of long term synaptic depression.


go_id: GO:1900454
term: positive regulation of long term synaptic depression
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of long term synaptic depression.


go_id: GO:1900455
term: regulation of flocculation via cell wall protein-carbohydrate interaction
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of flocculation via cell wall protein-carbohydrate interaction.


go_id: GO:1900457
term: regulation of brassinosteroid mediated signaling pathway
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of brassinosteroid mediated signaling pathway.


go_id: GO:1900458
term: negative regulation of brassinosteroid mediated signaling pathway
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of brassinosteroid mediated signaling pathway.


go_id: GO:1900459
term: positive regulation of brassinosteroid mediated signaling pathway
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of brassinosteroid mediated signaling pathway.


go_id: GO:1900460
ontology: BP
term:
negative regulation of invasive growth in response to glucose limitation by negative regulation of transcription from RNA polymerase II promoter

definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of invasive growth in response to glucose limitation by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900461
ontology: BP
term:
positive regulation of pseudohyphal growth by positive regulation of transcription from RNA polymerase II promoter

definition:
Any process that activates or increases the frequency, rate or extent of pseudohyphal growth by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900462
ontology: BP
term:
negative regulation of pseudohyphal growth by negative regulation of transcription from RNA polymerase II promoter

definition:
Any process that activates or increases the frequency, rate or extent of pseudohyphal growth by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II Any process that stops, prevents, or reduces the frequency, rate or extent of pseudohyphal growth by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900463
ontology: BP
term:
negative regulation of cellular response to alkaline pH by negative regulation of transcription from RNA polymerase II promoter

definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular response to alkalinity by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900464
ontology: BP
term:
negative regulation of cellular hyperosmotic salinity response by negative regulation of transcription from RNA polymerase II promoter

definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular hyperosmotic salinity response by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900465
ontology: BP
term:
negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter

definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of cellular arginine catabolic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900466
ontology: BP
term:
positive regulation of arginine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter

definition:
Any process that activates or increases the frequency, rate or extent of arginine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900468
term: regulation of phosphatidylserine biosynthetic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of phosphatidylserine biosynthetic process.


go_id: GO:1900469
term: negative regulation of phosphatidylserine biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine biosynthetic process.


go_id: GO:1900470
term: positive regulation of phosphatidylserine biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of phosphatidylserine biosynthetic process.


go_id: GO:1900471
ontology: BP
term:
negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter

definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of inositol biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900472
ontology: BP
term:
positive regulation of phosphatidylcholine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter

definition:
Any process that activates or increases the frequency, rate or extent of phosphatidylcholine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900473
ontology: BP
term:
negative regulation of phosphatidylcholine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter

definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylcholine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900474
ontology: BP
term:
negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter

definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of mating type switching by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900475
ontology: BP
term:
positive regulation of meiosis by negative regulation of transcription from RNA polymerase II promoter

definition:
Any process that activates or increases the frequency, rate or extent of meiosis by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900476
ontology: BP
term:
positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter

definition:
Any process that activates or increases the frequency, rate or extent of meiosis by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900477
ontology: BP
term:
negative regulation of G1/S transition of mitotic cell cycle by negative regulation of transcription from RNA polymerase II promoter

definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of G1/S transition of mitotic cell cycle by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900478
ontology: BP
term:
positive regulation of sulfate assimilation by positive regulation of transcription from RNA polymerase II promoter

definition:
Any process that activates or increases the frequency, rate or extent of sulfate assimilation by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900479
term: positive regulation of flocculation via cell wall protein-carbohydrate interaction
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of flocculation via cell wall protein-carbohydrate interaction.


go_id: GO:1900481
term: negative regulation of diacylglycerol biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of diacylglycerol biosynthetic process.


go_id: GO:1900482
term: positive regulation of diacylglycerol biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of diacylglycerol biosynthetic process.


go_id: GO:1900484
term: negative regulation of protein targeting to vacuolar membrane
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of protein targeting to vacuolar membrane.


go_id: GO:1900485
term: positive regulation of protein targeting to vacuolar membrane
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of protein targeting to vacuolar membrane.


go_id: GO:1900486
term: positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of isopentenyl diphosphate biosynthetic process, mevalonate pathway.


go_id: GO:1900488
term: negative regulation of [2Fe-2S] cluster assembly
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of [2Fe-2S] cluster assembly.


go_id: GO:1900490
term: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of hydroxymethylglutaryl-CoA reductase (NADPH) activity.


go_id: GO:1900492
term: negative regulation of [4Fe-4S] cluster assembly
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of [4Fe-4S] cluster assembly.


go_id: GO:1900494
term: regulation of butyryl-CoA biosynthetic process from acetyl-CoA
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.


go_id: GO:1900495
term: negative regulation of butyryl-CoA biosynthetic process from acetyl-CoA
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.


go_id: GO:1900496
term: positive regulation of butyryl-CoA biosynthetic process from acetyl-CoA
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of butyryl-CoA biosynthetic process from acetyl-CoA.


go_id: GO:1900497
term: regulation of butyryl-CoA catabolic process to butanol
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of butyryl-CoA catabolic process to butanol.


go_id: GO:1900498
term: negative regulation of butyryl-CoA catabolic process to butanol
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of butyryl-CoA catabolic process to butanol.


go_id: GO:1900499
term: positive regulation of butyryl-CoA catabolic process to butanol
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of butyryl-CoA catabolic process to butanol.


go_id: GO:1900500
term: regulation of butyryl-CoA catabolic process to butyrate
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of butyryl-CoA catabolic process to butyrate.


go_id: GO:1900501
term: negative regulation of butyryl-CoA catabolic process to butyrate
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of butyryl-CoA catabolic process to butyrate.


go_id: GO:1900502
term: positive regulation of butyryl-CoA catabolic process to butyrate
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of butyryl-CoA catabolic process to butyrate.


go_id: GO:1900506
term: regulation of iron-sulfur-molybdenum cofactor assembly
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of iron-sulfur-molybdenum cofactor assembly.


go_id: GO:1900507
term: negative regulation of iron-sulfur-molybdenum cofactor assembly
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of iron-sulfur-molybdenum cofactor assembly.


go_id: GO:1900508
term: positive regulation of iron-sulfur-molybdenum cofactor assembly
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of iron-sulfur-molybdenum cofactor assembly.


go_id: GO:1900510
term: negative regulation of pentose catabolic process to ethanol
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of pentose catabolic process to ethanol.


go_id: GO:1900511
term: positive regulation of pentose catabolic process to ethanol
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of pentose catabolic process to ethanol.


go_id: GO:1900512
term: regulation of starch utilization system complex assembly
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of starch utilization system complex assembly.


go_id: GO:1900513
term: negative regulation of starch utilization system complex assembly
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of starch utilization system complex assembly.


go_id: GO:1900514
term: positive regulation of starch utilization system complex assembly
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of starch utilization system complex assembly.


go_id: GO:1900516
term: negative regulation of xylose catabolic process to ethanol
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of xylose catabolic process to ethanol.


go_id: GO:1900517
term: positive regulation of xylose catabolic process to ethanol
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of xylose catabolic process to ethanol.


go_id: GO:1900522
term: negative regulation of response to amylopectin
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of response to amylopectin.


go_id: GO:1900524
ontology: BP
term:
positive regulation of flocculation via cell wall protein-carbohydrate interaction by positive regulation of transcription from RNA polymerase II promoter

definition:
Any process that activates or increases the frequency, rate or extent of flocculation via cell wall protein-carbohydrate interaction process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900525
ontology: BP
term:
positive regulation of phosphatidylserine biosynthetic process by positive regulation of transcription from RNA polymerase II promoter

definition:
Any process that activates or increases the frequency, rate or extent of phosphatidylserine biosynthetic process by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900526
ontology: BP
term:
negative regulation of phosphatidylserine biosynthetic process by negative regulation of transcription from RNA polymerase II promoter

definition:
Any process that stops, prevents, or reduces the frequency, rate or extent of phosphatidylserine biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.


go_id: GO:1900543
term: negative regulation of purine nucleotide metabolic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of purine nucleotide metabolic process.


go_id: GO:1900544
term: positive regulation of purine nucleotide metabolic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of purine nucleotide metabolic process.


go_id: GO:1900545
term: regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter
ontology: BP
definition:
A regulation of transcription from RNA polymerase II promoter that results in regulation of phenotypic switching.


go_id: GO:1900546
ontology: BP
term:
positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter

definition:
A regulation of transcription from RNA polymerase II promoter that results in positive regulation of phenotypic switching.


go_id: GO:1900547
ontology: BP
term:
negative regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter

definition:
A regulation of transcription from RNA polymerase II promoter that results in negative regulation of phenotypic switching.


go_id: GO:1900548
term: heme b catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of heme b, a Fe(II) porphyrin complex readily isolated from the hemoglobin of beef blood, but also found in other proteins including other hemoglobins, myoglobins, cytochromes P-450, catalases, peroxidases as well as b type cytochromes.


go_id: GO:1900550
term: N',N'',N'''-triacetylfusarinine C catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of N',N'',N'''-triacetylfusarinine C.


go_id: GO:1900551
term: N',N'',N'''-triacetylfusarinine C biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of N',N'',N'''-triacetylfusarinine C.


go_id: GO:1900580
term: (17Z)-protosta-17(20),24-dien-3beta-ol catabolic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the breakdown of (17Z)-protosta-17(20),24-dien-3beta-ol.


go_id: GO:1900581
term: (17Z)-protosta-17(20),24-dien-3beta-ol biosynthetic process
ontology: BP
definition:
The chemical reactions and pathways resulting in the formation of (17Z)-protosta-17(20),24-dien-3beta-ol.


go_id: GO:1900627
term: negative regulation of arugosin biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of arugosin biosynthetic process.


go_id: GO:1900628
term: positive regulation of arugosin biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of arugosin biosynthetic process.


go_id: GO:1900638
term: negative regulation of asperfuranone biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of asperfuranone biosynthetic process.


go_id: GO:1900639
term: positive regulation of asperfuranone biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of asperfuranone biosynthetic process.


go_id: GO:1900641
term: negative regulation of austinol biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of austinol biosynthetic process.


go_id: GO:1900642
term: positive regulation of austinol biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of austinol biosynthetic process.


go_id: GO:1900644
term: negative regulation of chanoclavine-I biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of chanoclavine-I biosynthetic process.


go_id: GO:1900645
term: positive regulation of chanoclavine-I biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of chanoclavine-I biosynthetic process.


go_id: GO:1900646
term: regulation of chanoclavine-I aldehyde biosynthetic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of chanoclavine-I aldehyde biosynthetic process.


go_id: GO:1900647
term: negative regulation of chanoclavine-I aldehyde biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of chanoclavine-I aldehyde biosynthetic process.


go_id: GO:1900648
term: positive regulation of chanoclavine-I aldehyde biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of chanoclavine-I aldehyde biosynthetic process.


go_id: GO:1900650
term: negative regulation of dehydroaustinol biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of dehydroaustinol biosynthetic process.


go_id: GO:1900651
term: positive regulation of dehydroaustinol biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of dehydroaustinol biosynthetic process.


go_id: GO:1900653
term: negative regulation of demethylkotanin biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of demethylkotanin biosynthetic process.


go_id: GO:1900654
term: positive regulation of demethylkotanin biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of demethylkotanin biosynthetic process.


go_id: GO:1900656
term: negative regulation of diorcinol biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of diorcinol biosynthetic process.


go_id: GO:1900657
term: positive regulation of diorcinol biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of diorcinol biosynthetic process.


go_id: GO:1900659
term: negative regulation of emericellamide biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of emericellamide biosynthetic process.


go_id: GO:1900660
term: positive regulation of emericellamide biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of emericellamide biosynthetic process.


go_id: GO:1900662
term: negative regulation of emericellamide A biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of emericellamide A biosynthetic process.


go_id: GO:1900663
term: positive regulation of emericellamide A biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of emericellamide A biosynthetic process.


go_id: GO:1900665
term: negative regulation of emodin biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of emodin biosynthetic process.


go_id: GO:1900666
term: positive regulation of emodin biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of emodin biosynthetic process.


go_id: GO:1900668
term: negative regulation of endocrocin biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of endocrocin biosynthetic process.


go_id: GO:1900669
term: positive regulation of endocrocin biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of endocrocin biosynthetic process.


go_id: GO:1900671
term: negative regulation of F-9775A biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of F-9775A biosynthetic process.


go_id: GO:1900672
term: positive regulation of F-9775A biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of F-9775A biosynthetic process.


go_id: GO:1900676
term: negative regulation of F-9775B biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of F-9775B biosynthetic process.


go_id: GO:1900677
term: positive regulation of F-9775B biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of F-9775B biosynthetic process.


go_id: GO:1900679
term: negative regulation of ferricrocin biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of ferricrocin biosynthetic process.


go_id: GO:1900680
term: positive regulation of ferricrocin biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of ferricrocin biosynthetic process.


go_id: GO:1900684
term: negative regulation of fumonisin biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of fumonisin biosynthetic process.


go_id: GO:1900685
term: positive regulation of fumonisin biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of fumonisin biosynthetic process.


go_id: GO:1900687
term: negative regulation of gerfelin biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of gerfelin biosynthetic process.


go_id: GO:1900688
term: positive regulation of gerfelin biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of gerfelin biosynthetic process.


go_id: GO:1900690
term: negative regulation of gliotoxin biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of gliotoxin biosynthetic process.


go_id: GO:1900691
term: positive regulation of gliotoxin biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of gliotoxin biosynthetic process.


go_id: GO:1900693
term: negative regulation of (+)-kotanin biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of (+)-kotanin biosynthetic process.


go_id: GO:1900694
term: positive regulation of (+)-kotanin biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of (+)-kotanin biosynthetic process.


go_id: GO:1900695
term: regulation of N',N'',N'''-triacetylfusarinine C biosynthetic process
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of N',N'',N'''-triacetylfusarinine C biosynthetic process.


go_id: GO:1900696
term: negative regulation of N',N'',N'''-triacetylfusarinine C biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of N',N'',N'''-triacetylfusarinine C biosynthetic process.


go_id: GO:1900697
term: positive regulation of N',N'',N'''-triacetylfusarinine C biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of N',N'',N'''-triacetylfusarinine C biosynthetic process.


go_id: GO:1900699
term: negative regulation of o-orsellinic acid biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of o-orsellinic acid biosynthetic process.


go_id: GO:1900700
term: positive regulation of o-orsellinic acid biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of o-orsellinic acid biosynthetic process.


go_id: GO:1900702
term: negative regulation of orcinol biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of orcinol biosynthetic process.


go_id: GO:1900703
term: positive regulation of orcinol biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of orcinol biosynthetic process.


go_id: GO:1900705
term: negative regulation of siderophore biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of siderophore biosynthetic process.


go_id: GO:1900706
term: positive regulation of siderophore biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of siderophore biosynthetic process.


go_id: GO:1900708
term: negative regulation of tensidol A biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of tensidol A biosynthetic process.


go_id: GO:1900709
term: positive regulation of tensidol A biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of tensidol A biosynthetic process.


go_id: GO:1900711
term: negative regulation of tensidol B biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of tensidol B biosynthetic process.


go_id: GO:1900712
term: positive regulation of tensidol B biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of tensidol B biosynthetic process.


go_id: GO:1900714
term: negative regulation of violaceol I biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of violaceol I biosynthetic process.


go_id: GO:1900715
term: positive regulation of violaceol I biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of violaceol I biosynthetic process.


go_id: GO:1900717
term: negative regulation of violaceol II biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of violaceol II biosynthetic process.


go_id: GO:1900718
term: positive regulation of violaceol II biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of violaceol II biosynthetic process.


go_id: GO:1900720
term: negative regulation of uterine smooth muscle relaxation
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of uterine smooth muscle relaxation.


go_id: GO:1900721
term: positive regulation of uterine smooth muscle relaxation
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of uterine smooth muscle relaxation.


go_id: GO:1900729
term: regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway
ontology: BP
definition:
Any process that modulates the frequency, rate or extent of adenylate cyclase-inhibiting opioid receptor signaling pathway.


go_id: GO:1900730
term: negative regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of adenylate cyclase-inhibiting opioid receptor signaling pathway.


go_id: GO:1900731
term: positive regulation of adenylate cyclase-inhibiting opioid receptor signaling pathway
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of adenylate cyclase-inhibiting opioid receptor signaling pathway.


go_id: GO:1900733
term: negative regulation of polyketide biosynthetic process
ontology: BP
definition:
Any process that stops, prevents or reduces the frequency, rate or extent of polyketide biosynthetic process.


go_id: GO:1900734
term: positive regulation of polyketide biosynthetic process
ontology: BP
definition:
Any process that activates or increases the frequency, rate or extent of polyketide biosynthetic process.


