Control probe
Control probe
putative nitrate transporter
integral membrane protein -like
RPT2 (ROOT PHOTOTROPISM 2); protein binding; light inducible root phototropism 2 encoding a signal transducer of the phototropic response in Arabidopsis
unknown protein
ubiquitin conjugating enzyme; ubiquitin-conjugating enzyme family protein, low similarity to ubiquitin-conjugating BIR-domain enzyme APOLLON (Homo sapiens) GI:8489831, ubiquitin-conjugating enzyme (Mus musculus) GI:3319990; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme
ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding; DEAD box RNA helicase, putative, similar to SP|P23394 Pre-mRNA splicing factor RNA helicase PRP28 {Saccharomyces cerevisiae}; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain
putative UDP-N-acetylglucosamine pyrophosphorylase
KUP11; potassium ion transporter; potassium transporter
unknown protein; expressed protein
FDH (FIDDLEHEAD); acyltransferase; epidermis-specific, encodes a putative beta-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle.
unknown protein; expressed protein
binding / transporter; mitochondrial substrate carrier family protein, contains Pfam profile: PF00153 mitochondrial carrier protein
putative serine carboxypeptidase I
catalytic/ hydrolase; hydrolase, alpha/beta fold family protein, similar to ethylene-induced esterase (Citrus sinensis) GI:14279437, polyneuridine aldehyde esterase (Rauvolfia serpentina) GI:6651393; contains Pfam profile PF00561: hydrolase, alpha/beta fold family
hypothetical protein
unknown protein; flavin reductase-related, low similarity to SP|P30043 Flavin reductase {Homo sapiens}
unknown protein; expressed protein
putative cytochrome P450
nodulin-like protein
putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
catalytic/ phosphomannomutase
PIP1B; water channel
unknown protein; peroxisomal biogenesis factor 11 family protein / PEX11 family protein, contains Pfam profile PF05648: Peroxisomal biogenesis factor 11 (PEX11)
DNA binding; DNA-binding protein, putative, identical to DNA-binding protein gi|601843|gb|AAA57124 (Arabidopsis thaliana); contains Pfam domain, PF03766: Remorin, N-terminal region; contains Pfam domain, PF03763: Remorin, C-terminal region
catalytic/ hydroxymethylglutaryl-CoA lyase; hydroxymethylglutaryl-CoA lyase, putative / 3-hydroxy-3-methylglutarate-CoA lyase, putative / HMG-CoA lyase, putative, similar to SP|P35915 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (HMG-CoA lyase) {Gallus gallus}; contains Pfam profile PF00682: HMGL-like
putative NADH dehydrogenase (ubiquinone oxidoreductase)
DNA binding / transcription factor; encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.
unknown protein
unknown protein
unknown protein
unknown protein
CCA1
ASA2; anthranilate synthase; anthranilate synthase - alpha subunit
pseudogene
ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding; zinc finger (CCCH type) helicase family protein, similar to SP|Q28141 ATP-dependent RNA helicase A (Nuclear DNA helicase II) (DEAD-box protein 9) {Bos taurus}; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar)
unknown protein
predicted GPI-anchored protein
unknown protein; universal stress protein (USP) family protein, similar to ER6 protein (Lycopersicon esculentum) GI:5669654; contains Pfam profile PF00582: universal stress protein family
unknown protein
putative non-green plastid inner envelope membrane protein
ethanolamine-phosphate cytidylyltransferase/ nucleotidyltransferase; ethanolamine-phosphate cytidylyltransferase, putative / phosphorylethanolamine transferase, putative / CTP:phosphoethanolamine cytidylyltransferase, putative, similar to SP|Q99447 Ethanolamine-phosphate cytidylyltransferase (EC 2.7.7.14) {Homo sapiens}; contains Pfam profile PF01467: Cytidylyltransferase
AGO4 (ARGONAUTE 4); PAZ domain-containing protein / piwi domain-containing protein, similar to SP|Q9QZ81 Eukaryotic translation initiation factor 2C 2 {Rattus norvegicus}; contains Pfam profiles PF02171: Piwi domain, PF02170: PAZ domain
PCNA2 (PROLIFERATING CELL NUCLEAR 2); DNA binding / DNA polymerase processivity factor; proliferating cell nuclear antigen 2 (PCNA2), identical to SP|Q9ZW35 Proliferating cell nuclear antigen 2 (PCNA 2) {Arabidopsis thaliana}; nearly identical to SP|Q43124 Proliferating cell nuclear antigen (PCNA) {Brassica napus}; contains Pfam profiles PF00705: Proliferating cell nuclear antigen N-terminal domain, PF02747: Proliferating cell nuclear antigen C-terminal domain
putative tropinone reductase
unknown protein; DC1 domain-containing protein, contains Pfam profile PF03107: DC1 domain
ATPP2-B10; F-box family protein / SKP1 interacting partner 3-related, contains similarity to SKP1 interacting partner 3 GI:10716951 from (Arabidopsis thaliana)
HIS4; histone 4
putative aquaporin (water channel protein)
unknown protein; auxin-responsive family protein, similar to auxin-induced protein TGSAUR22 (GI:10185820) (Tulipa gesneriana)
ceramidase; ceramidase family protein, contains Pfam domain, PF04734: Neutral/alkaline nonlysosomal ceramidase
phytochrome B
unknown protein
ALDH11A3; aldehyde dehydrogenase/ oxidoreductase; Arabidopsis thaliana At2g24270/F27D4.18 mRNA, complete cds
ATTIM17-2; protein translocase/ protein transporter; Mitochondrial inner membrane translocase. Together with AtTIM17-1, TIM17-2 has a long C-terminal extension not present in other TIMs. The extension is located in the outer membrane and so TIM17-2 links the inner and outer mitochondrial membranes. The C-terminal region is essential for protein import into mitochondria via the general import pathway but is not necessary for import via the carrier pathway.
putative protein
putative AP2 domain transcription factor
carbohydrate transporter/ sugar porter
ATATH9; member of ATH subfamily
nucleic acid binding; replication protein, putative, similar to replication protein A 30kDa (Oryza sativa (japonica cultivar-group)) GI:13516746; contains InterPro entry IPR004365: OB-fold nucleic acid binding domain
unknown protein; expressed protein
putative lipase
unknown protein
similar to cold acclimation protein WCOR413 [Triticum aestivum]
unknown protein; pentatricopeptide (PPR) repeat-containing protein, contains Pfam profile PF01535: PPR repeat
unknown protein
putative ribosomal protein L6
putative myosin heavy chain
unknown protein; photosystem I reaction center subunit IV, chloroplast, putative / PSI-E, putative (PSAE2), identical to SP|Q9S714; similar to SP|P12354 Photosystem I reaction center subunit IV, chloroplast precursor (PSI-E) {Spinacia oleracea}; contains Pfam profile PF02427: Photosystem I reaction centre subunit IV / PsaE
unknown protein
PIF4 (PHYTOCHROME INTERACTING FACTOR 4); DNA binding / transcription factor; Isolated as a semidominant mutation defective in red -light responses. Encodes a nuclear localized bHLH protein that interacts with active PhyB protein. Negatively regulates phyB mediated red light responses.
amine oxidase/ oxidoreductase; amine oxidase family protein, similar to polyamine oxidase SP:O64411 (Zea mays); contains Pfam profile PF01593 amine oxidase, flavin-containing
putative auxin-induced protein
unknown protein
unknown protein; expressed protein, contains Pfam profile PF04146: YT521-B-like family
glutathione transferase, putative
Unknown protein
kinase; leucine-rich repeat family protein / protein kinase family protein, contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain
ATRPAC43; DNA binding / DNA-directed RNA polymerase; DNA-directed RNA polymerase, putative, identical to RNA polymerase subunit (Arabidopsis thaliana) GI:514324; contains Pfam profile PF01000: RNA polymerase Rpb3/RpoA insert domain
ACLA-2; One of the three genes encoding subunit A of the trimeric enzyme ATP Citrate lyase
AST91 (SULFATE TRANSPORTER 91); sulfate transporter; AST91 mRNA for sulfate transporter, complete cds
AHP5 (HISTIDINE-CONTAINING PHOSPHOTRANSFER FACTOR 5); Encodes histidine-containing phosphotransfer (HPt) factor.
unknown protein; photosystem II family protein, similar to SP:P74367 {Synechocystis sp.}; similar to ESTs emb|Z27038, gb|AA451546, emb|Z29876, gb|T45359 and gb|R90316
unknown protein; expressed protein, contains 2 predicted transmembrane domains; expression supported by MPSS
LIN2 (LESION INITIATION 2); coproporphyrinogen oxidase; AB044394 Arabidopsis thaliana LIN2 mRNA for coproporphyrinogen III oxidase, complete cds
unknown protein; pentatricopeptide (PPR) repeat-containing protein, contains Pfam profile PF01535: PPR repeat
electron transporter/ thiol-disulfide exchange intermediate; thioredoxin family protein, contains Pfam profile: PF00085 Thioredoxin; similar to ESTs gb|T46281, gb|R83933, gb|N65879, emb|F14466, gb|N96726, gb|AA042340, and emb|Z18150
unknown protein
unknown protein; expressed protein
unknown protein
AXR1 (AUXIN RESISTANT 1); ubiquitin-like activating enzyme; Similar to the ubiquitin-activating enzyme E1. Involved in auxin action.
unknown protein; expressed protein
ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase; protein kinase family protein, contains Pfam domain, PF00069: Protein kinase domain
oligosaccharide transporter; OST3/OST6 family protein, weak similarity to SP|Q13454 N33 protein {Homo sapiens}; contains Pfam profile PF04756: OST3 / OST6 family
heat shock protein binding / unfolded protein binding; DNAJ heat shock N-terminal domain-containing protein, similar to SP|Q9UBS4 DnaJ homolog subfamily B member 11 precursor Homo sapiens; contains Pfam profile PF00226 DnaJ domain
ATGPX1 (GLUTATHIONE PEROXIDASE 1); glutathione peroxidase; Encodes glutathione peroxidase.
unknown protein
catalytic; phenazine biosynthesis PhzC/PhzF family protein, contains Pfam profile: PF02567 phenazine biosynthesis-like protein
carbonate dehydratase/ zinc ion binding; carbonic anhydrase, putative / carbonate dehydratase, putative, similar to SP|P42737 Carbonic anhydrase 2 (EC 4.2.1.1) (Carbonate dehydratase 2) {Arabidopsis thaliana}; contains Pfam profile PF00484: Carbonic anhydrase
DNA binding; histone H3, identical to histone H3 from Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
nicotianamine synthase like protein
gamma-glutamyl hydrolase
GIGANTEA (GI)
unknown protein; expressed protein, similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:BAD68607.1)
unknown protein; ferredoxin-related, similar to Ferredoxin. (SP:O78510) (Cryptomonas phi) {Guillardia theta}
hypothetical protein
unknown protein; expressed protein, contains Pfam profile PF04146: YT521-B-like family
unknown protein
CKS2; cyclin-dependent protein kinase; cyclin-dependent kinase, putative / CDK, putative, similar to Cks1 protein (Arabidopsis thaliana) gi|2274859|emb|CAA03859
TOE1; DNA binding / transcription factor; AP2 domain-containing transcription factor RAP2.7 (RAP2.7), nearly identical to AP2 domain transcription factor RAP2.7 (GI:2281639) (Arabidopsis thaliana)
putative ubiquinone biosynthesis protein
unknown protein
electron transporter/ heat shock protein binding / unfolded protein binding; DNAJ heat shock N-terminal domain-containing protein, low similarity to GFA2 (Arabidopsis thaliana) GI:21429604; contains Pfam profile PF00226: DnaJ domain
FTSZ2-1; GTP binding / GTPase/ structural molecule; plastid division protein FtsZ mRNA, complete cds
ribonucleoside-diphosphate reductase large subunit
unknown protein; expressed protein
putative mutT domain protein
unknown protein
unknown protein
SPA1 (SUPPRESSOR OF PHYA-105 1); signal transducer; SPA1 is a PHYA signaling intermediate, putative regulator of PHYA signaling pathway.Light responsive repressor of photomorphogenesis.
SPA1 (SUPPRESSOR OF PHYA-105 1); signal transducer; SPA1 is a PHYA signaling intermediate, putative regulator of PHYA signaling pathway.Light responsive repressor of photomorphogenesis.
fructose-bisphosphate aldolase; similar to fructose-bisphosphate aldolase, putative [Arabidopsis thaliana] (TAIR:At4g38970.2); similar to plastidic aldolase [Nicotiana paniculata] (GB:BAA77603.1); contains InterPro domain Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741)
malate oxidoreductase (malic enzyme)
catalytic/ protein phosphatase type 2C
amino acid binding / aspartate kinase/ homoserine dehydrogenase; bifunctional aspartate kinase/homoserine dehydrogenase / AK-HSDH, nearly identical to gb|X71364 (PIR|S46497) aspartate kinase / homoserine dehydrogenase from Arabidopsis thaliana; contains ACT domain
unknown protein; 2-oxoglutarate-dependent dioxygenase, putative, Similar to Arabidopsis 2A6 (gb|X83096) and to tomato ethylene synthesis regulatory protein E8 (SP|P10967); EST gb|T76913 comes from this gene
putative auxin-induced protein, IAA17/AXR3-1
putative NAD+ dependent isocitrate dehydrogenase subunit 2, IDH2
GTP binding / guanyl nucleotide binding / signal transducer
COR15A (COLD-REGULATED 15A); A cold-regulated gene whose product is targeted to the chloroplast and constitutive expression increases freezing tolerance in protoplasts in vitro and chloroplasts in vivo. NMR and x-ray diffraction studies suggest that COR15a alters the intrinsic curvature of the inner membrane of chloroplast envelope.
cold-regulated protein cor15b precursor
putative inositol polyphosphate 5'-phosphatase
putative glucosyltransferase
putative protein kinase
acetolactate synthase/ amino acid binding; acetolactate synthase small subunit, putative, similar to gi:5931761 from Nicotiana plumbaginifolia
importin (nuclear transport factor ) like protein
putative myo-inositol 1-phosphate synthase
ATGPX2 (GLUTATHIONE PEROXIDASE 2); glutathione peroxidase; glutathione peroxidase GPx mRNA, complete cds
unknown protein
calmodulin binding; calmodulin-binding protein-related, contains similarity to potato calmodulin-binding protein PCBP GI:17933110 from (Solanum tuberosum)
unknown protein; expressed protein
DNA binding; histone H2A, putative, strong similarity to histone H2A.F/Z Arabidopsis thaliana GI:2407800; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
unknown protein; expressed protein, contains Pfam profile PF05127: Putative ATPase (DUF699)
STH; transcription factor/ zinc ion binding; a B-box zinc finger protein that interacts with COP1. contains a novel 11 amino acid motif at the C-terminus (also found at the N-terminus of HY5) that is involved in the COP1 interaction.
putative fructokinase
putative glyoxalase II
unknown protein
unknown protein
transcription factor; CCAAT-binding transcription factor (CBF-B/NF-YA) family protein, contains Pfam profile: PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B
unknown protein; expressed protein
phosphoserine transaminase/ transaminase; phosphoserine aminotransferase, putative, similar to Phosphoserine aminotransferase, chloroplast precursor (PSAT) (SP:Q96255) (Arabidopsis thaliana); contains TIGRFAM TIGR01364: phosphoserine aminotransferase; contains Pfam PF00266: aminotransferase, class V
unknown protein
hypothetical protein
GGT1 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 1); Identified by cloning the gene that corresponded to a purified protein having glyoxylate aminotransferase activity. Localized to the peroxisome and thought to be involved in photorespiration/ metabolic salvage pathway.
TUB1; GTP binding / GTPase/ structural molecule; beta tubulin gene downregulated by phytochrome A (phyA)-mediated far-red light high-irradiance and the phytochrome B (phyB)-mediated red light high-irradiance responses
hypothetical protein
RDR1 (RNA-DEPENDENT RNA POLYMERASE 1); RNA-directed RNA polymerase/ nucleic acid binding; Encodes RNA-dependent RNA polymerase. While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004).
unknown protein
unknown protein
SIGA (SIGMA FACTOR A); DNA binding / DNA-directed RNA polymerase/ transcription factor; Subunit of chloroplast RNA polymerase, confers the ability to recognize promoter sequences on the core enzyme
G-TMT (GAMMA-TOCOPHEROL METHYLTRANSFERASE); gamma-tocopherol methyltransferase (g-TMT) mRNA, nuclear; mutant has Deficient in alpha and beta tocopherol; Accumulates gamma tocopherol in leaves
calcium ion binding; calcium-binding EF hand family protein, contains INTERPRO:IPR002048 calcium-binding EF-hand domain
CYP71B2 (CYTOCHROME P450 71B2); heme binding / iron ion binding / monooxygenase/ oxygen binding; mRNA for cytochrome P450 monooxygenase, complete cds, clone
unknown protein; expressed protein
SEX1 (STARCH EXCESS 1); Encodes an alpha-glucan, water dikinase required for starch degradation. Involved in cold-induced freezing tolerance.
carboxylic ester hydrolase/ hydrolase, acting on ester bonds / lipase; GDSL-motif lipase, putative, similar to lipase (Arabidopsis thaliana) GI:1145627; contains Pfam profile: PF00657 Lipase/Acylhydrolase with GDSL-like motif
beta-VPE
PDS1 (PHYTOENE DESATURATION 1); Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.
FTSH8; ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding; encodes a FtsH protease that is localized to the chloroplast
unknown protein; expressed protein, weakly similar to drought-induced protein SDi-6 (PIR:S71562) common sunflower (fragment)
unknown protein; expressed protein
nucleotide binding; transducin family protein / WD-40 repeat family protein, Strong similarity to gb AF096285 serine-threonine kinase receptor-associated protein from Mus musculus and contains 5 PF|00400 WD40, G-beta repeat domains. EST gb|F14050 comes from this gene
antiporter/ drug transporter/ transporter; MATE efflux family protein, contains Pfam profile PF01554: Uncharacterized membrane protein family
putative disulfide isomerase
unknown protein
putative replication factor C subunit
OGG1; Encodes 8-oxoguanine-DNA glycosylase. DNA repair enzyme.
putative chloroplast FtsH protease
Mlo like protein
unknown protein
unknown protein
TOPP3; protein phosphatase type 1; Encodes the catalytic subunit of a Type 1 phosphoprotein Ser/Thr phosphatase, expressed in roots, shoots and flowers.
ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme; ubiquitin-conjugating enzyme, putative, identical or nearly so to Ubiquitin-conjugating enzymes SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis thaliana}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme
RNA binding / nucleic acid binding; U2 snRNP auxiliary factor small subunit, putative, Strong similarity to gb|Y18349 U2 snRNP auxiliary factor, small subunit from Oryza sativa. ESTs gb|AA586295 and gb|AA597332 come from this gene
transmembrane like protein
unknown protein; expressed protein, contains Pfam profile PF01027: Uncharacterized protein family UPF0005
unknown protein
heat shock protein binding / unfolded protein binding; DNAJ heat shock N-terminal domain-containing protein, similar to J-Domain (Residues 1-77) Of The Escherichia Coli N-Terminal Fragment (Residues 1-104) Of The Molecular Chaperone Dnaj GI:5542126; contains Pfam profile PF00226 DnaJ domain
nucleotidyltransferase; ADP-glucose pyrophosphorylase family protein, contains Pfam profile PF00483: Nucleotidyl transferase; low similarity to mannose-1-phosphate guanylyltransferase (Hypocrea jecorina) GI:3323397
betaine aldehyde dehydrogenase like protein
unknown protein; WD-40 repeat family protein, contains Pfam profile PF00400: WD domain, G-beta repeat
AST56; sulfate transporter; cDNA encoding a sulfate transporter.
unknown protein
electron transporter/ thiol-disulfide exchange intermediate; glutaredoxin family protein
oxidoreductase, putative
unknown protein; expressed protein
unknown protein
transcription factor; RWP-RK domain-containing protein, similar to nodule inception protein (Lotus japonicus) GI:6448579; contains Pfam profile: PF02042 RWP-RK domain
isocitrate dehydrogenase (NADP+)/ oxidoreductase; isocitrate dehydrogenase, putative / NADP+ isocitrate dehydrogenase, putative, strong similarity to isocitrate dehydrogenase SP|Q40345 from (Medicago sativa)
disulfide oxidoreductase/ monooxygenase; flavin-containing monooxygenase family protein / FMO family protein, similar to flavin-containing monooxygenase FMO3 (dimethylaniline monoxygenase (N-oxide forming) 3) GI:349533 (SP|P32417) from Oryctolagus cuniculus, (SP|P97501) from Mus musculus; contains Pfam profile PF00743 Flavin-binding monooxygenase-like domain
protein binding / ubiquitin-protein ligase/ zinc ion binding; zinc finger (C3HC4-type RING finger) family protein, contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)
NRAMP1; manganese ion transporter/ metal ion transporter; Thought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.
unknown protein; eukaryotic translation initiation factor-related, contains weak similarity to Swiss-Prot:P23588 eukaryotic translation initiation factor 4B (eIF-4B) (Homo sapiens)
DNA ligase
unknown protein
unknown protein; expressed protein
unknown protein
putative WD-repeat protein
unknown protein; expressed protein, contains Pfam profile PF03087: Arabidopsis protein of unknown function
hypothetical protein
strictosidine synthase; strictosidine synthase family protein, similar to strictosidine synthase (Rauvolfia serpentina)(SP|P15324)
calreticulin like protein
catalytic/ hydrolase; hydrolase, alpha/beta fold family protein, similar to monoglyceride lipase from (Homo sapiens) GI:14594904, (Mus musculus) GI:2632162,(Rattus norvegicus) GI:19697886; contains Pfam profile PF00561: hydrolase, alpha/beta fold family
ADP-glucose pyrophosphorylase, putative
unknown protein; expressed protein
tubulin alpha-2/alpha-4 chain, putative
unknown protein; nodulin MtN21 family protein, similar to MtN21 GI:2598575 (root nodule development) from (Medicago truncatula)
LHY (LATE ELONGATED HYPOCOTYL); DNA binding; myb-related putative transcription factor involved in circadian rhythm along with another myb transcription factor CCA1
glutathione peroxidase like protein
DNA binding / protein binding / zinc ion binding; PHD finger family protein, contains Pfam domain, PF00628: PHD-finger
UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin conjugating enzyme/ ubiquitin-like activating enzyme; ubiquitin carrier protein (UBC1) mRNA, complete cds
unknown protein; expressed protein
unknown protein
unknown protein; expressed protein
unknown protein
electron transporter/ thiol-disulfide exchange intermediate; thioredoxin family protein, low similarity to thioredoxin (Gallus gallus) GI:212766; contains Pfam profile: PF00085 Thioredoxin
unknown protein; phytochrome kinase substrate-related, contains weak similarity to Swiss-Prot:Q9SWI1 phytochrome kinase substrate 1 (Arabidopsis thaliana)
unknown protein; expressed protein, similar to YGL010w-like protein GI:2982301 from (Picea mariana)
carbohydrate binding; legume lectin family protein, contains Pfam domain, PF00139: Legume lectins beta domain
malic enzyme/ oxidoreductase, acting on NADH or NADPH, NAD or NADP as acceptor; malate oxidoreductase, putative, similar to malate oxidoreductase (NADP-dependent malic enzyme) GB:P34105 (Populus balsamifera subsp. trichocarpa)
unknown protein
unknown protein; expressed protein
DNA binding / endonuclease; endonuclease-related, similar to endonuclease III (Homo sapiens) GI:1753174; contains Pfam profile PF00633: Helix-hairpin-helix motif
ARA; GTP binding; Ras-related protein (ARA-1) (ARA) / small GTP-binding protein, putative, nearly identical to SP:P19892 Ras-related protein ARA-1 (Arabidopsis thaliana) (Gene 76:313-319(1989))
unknown protein
isulfide isomerase-related like protein
TUA4; Encodes an alpha tubulin isoform that is expressed in roots, leaves and flowers.
OTC (ORNITHINE CARBAMOYLTRANSFERASE); amino acid binding / aspartate carbamoyltransferase/ carboxyl- and carbamoyltransferase/ ornithine carbamoyltransferase; ornithine carbamoyltransferase, chloroplast / ornithine transcarbamylase / OTCase (OTC), identical to SP|O50039 Ornithine carbamoyltransferase, chloroplast precursor (EC 2.1.3.3) (OTCase) (Ornithine transcarbamylase) {Arabidopsis thaliana}
proliferating cellular nuclear antigen
DNA binding / transcription factor; encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.
UDP-glycosyltransferase/ transferase, transferring glycosyl groups; UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase
catalytic/ hydrolase; hydrolase, alpha/beta fold family protein, low similarity to SP|Q02104 Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase) {Psychrobacter immobilis}, contains Pfam profile PF00561: hydrolase, alpha/beta fold family
SAM1; methionine adenosyltransferase; S-adenosylmethionine synthetase gene sam-1
protein translocase; protein transport protein sec61, putative, similar to PfSec61 (Plasmodium falciparum) GI:3057044; contains Pfam profile PF00344: eubacterial secY protein
fructose 1,6-bisphosphatase, putative
glutaredoxin like protein
protein transporter; VHS domain-containing protein / GAT domain-containing protein, weak similarity to SP|Q9UJY5 ADP-ribosylation factor binding protein GGA1 {Homo sapiens}; contains Pfam profiles PF00790: VHS domain, PF03127: GAT domain
polygalacturonase; glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein, similar to polygalacturonase PG1 GI:5669846, PG2 GI:5669848 from (Glycine max); contains PF00295: Glycosyl hydrolases family 28 (polygalacturonases)
unknown protein
peptide transporter PTR2-B, putative
integral membrane protein, putative
AtSerat2;1 (SERINE ACETYLTRANSFERASE 1); Encodes a chloroplast/cytosol localized serine O-acetyltransferase involved in sulfur assimilation and cysteine biosynthesis. Expressed in the vascular system.
ATPPC1 (PHOSPHOENOLPYRUVATE CARBOXYLASE 1); phosphoenolpyruvate carboxylase; Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.
SSI2; acyl-[acyl-carrier protein] desaturase; Stearoyl ACP desaturase, involved in lipid biosynthesis. Resistant to necrotrophic pathogen Botrytis sineria but susceptible to Pseudomonas, Peranospora and cucumber mosaic virus.
putative signal recognition particle protein 14kD, ATSRP14
cysteine synthase (cpACS1)
GLX2-1 (GLYOXALASE 2-1); hydroxyacylglutathione hydrolase; glyoxalase II mitochondrial isozyme (Glx2-1) mRNA, nuclear
hypothetical protein
ATAMY3; alpha-amylase; Encodes a plastid localized alpha-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.
unknown protein
transcription factor/ zinc ion binding; zinc finger (B-box type) family protein
ATTAP1; ATPase, coupled to transmembrane movement of substances; member of TAP subfamily
SUC1; carbohydrate transporter/ sucrose:hydrogen symporter/ sugar porter; member of Sucrose-proton symporter family
unknown protein; senescence-associated family protein, similar to senescence-associated protein (GI:12836895) (Ipomoea batatas)
adenyl-nucleotide exchange factor/ chaperone binding / protein homodimerization; co-chaperone grpE family protein, similar to co-chaperone CGE1 precursor isoform b (Chlamydomonas reinhardtii) GI:15384279; contains Pfam profile PF01025: co-chaperone GrpE
AIG1 (AVRRPT2-INDUCED GENE 1); GTP binding; Identified as a gene that is induced by avirulence gene avrRpt2 and RPS2 after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2
unknown protein; eukaryotic translation initiation factor-related, similar to eukaryotic translation initiation factor 2A (GI:21956484) (Homo sapiens); similar to Eukaryotic translation initiation factor 3 subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b) (Swiss-Prot:P55884) (Homo sapiens)
antiporter/ drug transporter/ transporter; MATE efflux family protein, similar to ripening regulated protein DDTFR18 (Lycopersicon esculentum) GI:12231296; contains Pfam profile: PF01554 uncharacterized membrane protein family
unknown protein; expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g35780.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:XP_466380.1)
putative MAP kinase
kinase/ protein kinase; STN7 protein kinase; required for state transitions, phosphorylation of the major antenna complex (LHCII) between PSII and PSI, and light adaptation
predicted GPI-anchored protein
60S ribosomal protein L18A, putative
ATTPS6; transferase, transferring glycosyl groups / trehalose-phosphatase; Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.
HMG1 (3-HYDROXY-3-METHYLGLUTARYL COA REDUCTASE); encodes a 3-hydroxy-3-methylglutaryl coenzyme A, which is involved in melavonate biosynthesis and performs the first committed step in isoprenoid biosynthesis. Expression is activated in dark in leaf tissue but not controlled by light in the root (confine
ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase; protein kinase family protein, contains protein kinase domain, Pfam:PF00069
protein transporter; nuclear transport factor 2 (NTF2) family protein, contains Pfam domain, PF02136: Nuclear transport factor 2 (NTF2) domain
UDP-glucose:glycoprotein glucosyltransferase/ transferase, transferring glycosyl groups / transferase, transferring hexosyl groups; UDP-glucose:glycoprotein glucosyltransferase, putative, similar to UDP-glucose:glycoprotein glucosyltransferase precursor GB:Q09332 (SP|Q09332) from Drosophila melanogaster, (gi:7670746) and (gi:11346464) from Homo sapiens
unknown protein; expressed protein, low similarity to SP|O14976 Cyclin G-associated kinase (EC 2.7.1.-) {Homo sapiens}
putative protein kinase
photosystem I subunit VI precursor (PsaH2)
peptidase/ subtilase; subtilase family protein, contains similarity to subtilase; SP1 GI:9957714 from (Oryza sativa); contains Pfam profiles: PF00082 Subtilase family (3 copies)
Unknown protein
unknown protein
COR314-TM2; encodes a protein similar to the cold acclimation protein WCOR413 in wheat. Possibly targeted to thylakoid membrane.
putative thioredoxin
nitrate reductase 1 (NR1)
short chain alcohol dehydrogenase, putative
DNA binding / transcription factor; basic helix-loop-helix (bHLH) family protein, contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain
unknown protein
CCS1; superoxide dismutase copper chaperone; Copper/zinc superoxide dismutase copper chaperone. Localized to the chloroplast. Expressed in roots and shoots. Up-regulated in response to copper and senescence.
unknown protein; expressed protein
unknown protein; expressed protein
unknown protein
GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1); kinase; GSK3/shaggy-like protein kinase (GSK1) mRNA, complete cds
unknown protein
unknown protein; expressed protein
MAP1C (METHIONINE AMINOPEPTIDASE 1B); metalloexopeptidase; Encodes a methionine aminopeptidase formerly called MAP1B, renamed to MAP1C.
unknown protein
ATP binding; heavy-metal-associated domain-containing protein, similar to farnesylated protein 1 (GI:23304411) {Hordeum vulgare subsp. spontaneum}; contains Pfam profile PF00403: Heavy-metal-associated domain
unknown protein; pentatricopeptide (PPR) repeat-containing protein, contains INTERPRO:IPR002885 PPR repeats
putative glycogen synthase
unknown protein
ATP binding / thymidine kinase; thymidine kinase, putative, similar to thymidine kinase (Oryza sativa) SWISS-PROT:O81263
AT3g01540/F4P13_9
antiporter/ triose-phosphate transporter; triose phosphate/phosphate translocator, putative, similar to SWISS-PROT:P52178 triose phosphate/phosphate translocator (Cauliflower){Brassica oleracea}
lycopene beta cyclase
unknown protein
unknown protein; proteasome family protein, contains Pfam domain, PF01399: PCI domain
alpha subunit of F-actin capping protein
NHX2; sodium:hydrogen antiporter; member of Sodium proton exchanger family
DGD1 (DIGALACTOSYL DIACYLGLYCEROL DEFICIENT 1); galactolipid galactosyltransferase; Responsible for the final assembly of galactolipids in photosynthetic membranes.
unknown protein; glycine-rich protein
lysyl-tRNA synthetase
unknown protein
VMA10 (VACUOLAR MEMBRANE ATPASE 10); Subunit G of the vacuolar membrane ATPAse complex
ATP binding / nucleoside-triphosphatase/ nucleotide binding; sporulation protein-related, similar to hypothetical proteins: GB:P51281 (Chloroplast Porphyra purpurea), GB:BAA16982 (Synechocystis sp), GB:P49540 (Odontella sinensis), GB:AAB82669 (Chloroplast Cyanidium caldarium); similar to stage III sporulation protein AA (GI:18145497) (Clostridium perfringens str. 13); similar to stage III sporulation protein AA (mutants block sporulation after engulfment) (GI:22777578) (Oceanobacillus iheyensis)
ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding; AAA-type ATPase family protein, contains a ATP/GTP-binding site motif A (P-loop), PROSITE:PS00017
unknown protein; expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At5g01750.2); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:XP_470102.1); contains InterPro domain Protein of unknown function DUF567 (InterPro:IPR007612)
nucleic acid binding; expressed protein
enzyme inhibitor/ pectinesterase; pectinesterase, putative, contains similarity to pectinesterase from Vitis vinifera GI:15081598, Prunus persica SP|Q43062; contains Pfam profile PF01095 pectinesterase
nucleic acid binding / zinc ion binding; expressed protein
unknown protein; neurofilament protein-related, similar to NF-180 (GI:632549) (Petromyzon marinus) similar to Neurofilament triplet H protein (200 kDa neurofilament protein) (Neurofilament heavy polypeptide) (NF-H) (Swiss-Prot:P12036) (Homo sapiens)
ANT1 (AROMATIC AND NEUTRAL TRANSPORTER 1); amino acid permease/ amino acid transporter; encodes an amino acid transporter that transports aromatic and neutral amino acids, IAA, and 2,4-D. Expressed in all tissues with highest abundance in flowers and cauline leaves. a member of a small gene family in Arabidopsis and represents a new class of amino acid transporters.
unknown protein
DNA binding / transcription factor; myb family transcription factor, contains Pfam profile: PF00249 myb-like DNA-binding domain
hydrolase, acting on glycosyl bonds; DJ-1 family protein / protease-related, similar to Intracellular Protease (Pyrococcus horikoshii) GI:11513902; contains Pfam profile: PF01965 ThiJ/PfpI family
unknown protein; dimethylmenaquinone methyltransferase family protein, similar to bacterial S-adenosylmethionine:2-demethylmenaquinone methyltransferases; contains Pfam profile PF03737: Dimethylmenaquinone methyltransferase
COL2 (CONSTANS-LIKE 2); transcription factor/ zinc ion binding; homologous to the flowering-time gene CONSTANS (CO) encoding zinc-finger proteins
ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase; serine/threonine protein kinase, putative, similar to Pto kinase interactor 1 GB:AAC61805 from (Lycopersicon esculentum)
unknown protein
catalytic; fumarylacetoacetate hydrolase family protein, contains Pfam domain, PF01557: fumarylacetoacetate hydrolase family protein
CBL-interacting protein kinase 1 (CIPK1)
acyl-CoA thioesterase/ catalytic/ hydrolase, acting on ester bonds; thioesterase family protein, contains Pfam profile PF03061: thioesterase family protein
unknown protein
NMT1 (N-METHYLTRANSFERASE 1); phosphoethanolamine N-methyltransferase; Arabidopsis thaliana N-methyltransferase-like protein mRNA.
hypothetical protein
unknown protein
transporter; nitrate transporter (NTP3), nearly identical to nitrate transporter (Arabidopsis thaliana) GI:4490323; contains Pfam profile: PF00854 POT family
unknown protein
protein binding / zinc ion binding; PHD finger family protein, similar to zinc-finger protein BR140 (PIR|JC2069)(Homo sapiens); contains PHD-finger domain PF00628
protein phosphatase 2A regulatory subunit isoform B' delta
delta tonoplast integral protein (delta-TIP)
unknown protein
putative cell differentiation protein
AAPT2 (AMINOALCOHOLPHOSPHOTRANSFERASE); phosphatidyltransferase; aminoalcoholphosphotransferase (AAPT2) mRNA, complete cds
gamma-hydroxybutyrate dehydrogenase
unknown protein
unknown protein; expressed protein, similar to gda-1 (Pisum sativum) GI:2765418
hypothetical protein
unknown protein; expressed protein
unknown protein
pepsin A; aspartyl protease family protein, contains Pfam domain, PF00026: eukaryotic aspartyl protease
unknown protein
DNA binding; histone H3, identical to histone H3 from Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
unknown protein
EMB2421; monooxygenase/ oxidoreductase; similar to phenol 2-monooxygenase like FAD dependent oxidoreductase of plant origin in apicomplexans [Cryptosporidium parvum] (GB:EAK89698.1); contains InterPro domain Flavoprotein monooxygenase (InterPro:IPR000733); contains InterPro domain Monooxygenase, FAD-binding (InterPro:IPR002938); contains InterPro domain NAD-binding site (InterPro:IPR000205); contains InterPro domain Aromatic-ring hydroxylase (InterPro:IPR003042)
PHT2;1; low affinity phosphate transporter
unknown protein; NLI interacting factor (NIF) family protein, contains Pfam profile PF03031: NLI interacting factor
NPSN13; member of NPSN Gene Family
FAD binding / disulfide oxidoreductase/ glutathione-disulfide reductase/ oxidoreductase; glutathione reductase, putative, identical to GB:P48641 from (Arabidopsis thaliana)
DNA binding / catalytic; phosphoesterase, identical to phosphoesterase (Arabidopsis thaliana) GI:21630064; contains Pfam profile PF00645: Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region
GTP binding; Ras-related GTP-binding family protein, similar to GTP-binding protein GI:303742 from (Pisum sativum); contains Pfam profile: PF00071 ras family
DEGP; serine-type peptidase
RALFL24 (RALF-LIKE 24); Member of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide.
unknown protein
unknown protein; pentatricopeptide (PPR) repeat-containing protein, contains Pfam profile PF01535: PPR repeat
binding / transporter; mitochondrial substrate carrier family protein, contains Pfam profile: PF00153 mitochondrial carrier proteins
disease resistance protein, putative
unknown protein
ARC5 (ACCUMULATION AND REPLICATION OF CHLOROPLAST 5); GTP binding / GTPase; Facilitates separation of the two daughter chloroplasts.
ARC5 (ACCUMULATION AND REPLICATION OF CHLOROPLAST 5); GTP binding / GTPase; Facilitates separation of the two daughter chloroplasts.
branched-chain amino acid aminotransferase, putative
unknown protein; similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g55475.1); similar to P0415C01.14 [Oryza sativa (japonica cultivar-group)] (GB:NP_917459.1)
unknown protein; expressed protein
unknown protein
hydrolase, hydrolyzing O-glycosyl compounds; beta-fructosidase (BFRUCT1) / beta-fructofuranosidase / cell wall invertase, identical to beta-fructofuranosidase GI:402740 from (Arabidopsis thaliana)
CLC-b chloride channel protein
alpha-glucan phosphorylase, putative
unknown protein; expressed protein
unknown protein
DNA binding; histone H2A, putative, strong similarity to histone H2A GB:AAF64418 GI:7595337 from Arabidopsis thaliana, Triticum aestivum GI:536892; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
unknown protein; expressed protein, similar to UV-B and ozone similarly regulated protein 1 UOS1 (Pisum sativum) GI:20339364
pepsin A; similar to aspartyl protease family protein [Arabidopsis thaliana] (TAIR:At3g18490.1); similar to putative aspartic proteinase nepenthesin I [Oryza sativa (japonica cultivar-group)] (GB:NP_909181.1); contains InterPro domain Aspartic protease A1, pepsin (InterPro:IPR001461)
ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding; similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:At3g28510.1); similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:At3g28520.1); similar to hypothetical protein [Solanum tuberosum] (GB:AAU89729.1); contains InterPro domain AAA ATPase (InterPro:IPR003593); contains InterPro domain AAA ATPase, central region (InterPro:IPR003959)
unknown protein
ATP binding / protein binding / protein kinase; leucine-rich repeat family protein / protein kinase family protein, contains Pfam domains PF00560: Leucine Rich Repeat and PF00069: Protein kinase domain; contains 2 predicted transmembrane domains
unknown protein
ATGLR3.3; member of Putative ligand-gated ion channel subunit family
toxin receptor binding; thionin, putative, similar to thionin (Arabidopsis thaliana) GI:1181533
glutamine synthetase like protein
unknown protein; expressed protein
ferredoxin, putative
unknown protein; expressed protein
phosphoprotein phosphatase/ protein tyrosine/serine/threonine phosphatase; protein phosphatase-related, similar to protein phosphatase PTPKIS1 protein (GI:11595504) (Arabidopsis thaliana)
unknown protein
unknown protein
catalytic; tetrahydrofolate dehydrogenase/cyclohydrolase, putative, similar to SP|P07245 C-1-tetrahydrofolate synthase, cytoplasmic (C1-THF synthase) (Includes: Methylenetetrahydrofolate dehydrogenase (EC 1.5.1.5); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9); Formyltetrahydrofolate synthetase (EC 6.3.4.3)) {Saccharomyces cerevisiae}; contains Pfam profiles PF02882: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain, PF00763: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
protein binding; ankyrin repeat family protein, contains ankyrin repeat domains, Pfam:PF00023
unknown protein; expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At2g37570.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:XP_550166.1)
CRT1 (CALRETICULIN 1); calcium ion binding; calreticulin (Crt1) mRNA, complete cds
MYB-family transcription factor-like protein
unknown protein
hydrolase/ protein serine/threonine phosphatase; calcineurin-like phosphoesterase family protein, contains Pfam profile: PF00149 calcineurin-like phosphoesterase
hypothetical protein
unknown protein; expressed protein
unknown protein
unknown protein
unknown protein
OHP2 (ONE-HELIX PROTEIN 2); Encodes a novel member of the Lhc family from Arabidopsis with one predicted transmembrane alpha-helix closely related to helix I of Lhc protein from PSI (Lhca4). Gene expression is triggered by light stress and both transcript and protein accumulate in a light intensity-dependent manner. Ohp2 is associated with PSI under low- or high-light conditions.
kinase; protein kinase family protein / peptidoglycan-binding LysM domain-containing protein, protein kinase (Arabidopsis thaliana) GI:2852449; contains Pfam profiles PF01476: LysM domain, PF00069: Protein kinase domain
unknown protein; appr-1-p processing enzyme family protein, contains Pfam domain PF01661: Appr-1-p processing enzyme family
unknown protein (At1g16720)
hypothetical protein
unknown protein; expressed protein
unknown protein
TMP-C; a member of the plasma membrane intrinsic protein subfamily PIP1.
unknown protein; auxin-responsive family protein, similar to small auxin up RNA (GI:546362) {Arabidopsis thaliana}
DNA binding / transcription factor; myb family transcription factor, contains PFAM profile: PF00249 myb-like DNA binding domain
unknown protein; hydroxyproline-rich glycoprotein family protein, contains a rhodanese homology domain.
PRL (PROLIFERA); ATP binding / DNA binding / DNA-dependent ATPase; PROLIFERA mRNA, complete cds
SAG21 (SENESCENCE-ASSOCIATED GENE 21); Encodes late embryogenesis abundant protein, mRNA levels are elevated in response to various stresses.
putative photosystem I reaction center subunit II precursor
mitochondrial elongation factor Tu
putative oxidoreductase
putative membrane trafficking factor
putative potassium transporter
SAH7; Encodes a protein, expressed in leaves, with similarity to pollen allergens.
unknown protein; SPla/RYanodine receptor (SPRY) domain-containing protein, low similarity to RanBPM (Homo sapiens) GI:15080674; contains Pfam profile PF00622: SPRY domain
ATISA3/ISA3; alpha-amylase/ hydrolase, hydrolyzing O-glycosyl compounds; isoamylase, putative / starch debranching enzyme, putative, similar to isoamylase isoform 3 (Solanum tuberosum) GI:27728149, isoamylase (Oryza sativa) GI:3252794; contains Pfam profiles PF00128: Alpha amylase catalytic domain, PF02922: Isoamylase N-terminal domain
CPK4; ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase; Encodes a member of Calcium Dependent Protein Kinase (CDPK) gene family.
unknown protein
unknown protein; expressed protein
TOPP7; protein phosphatase type 1; encodes a type I serine/threonine protein phosphatase expressed in expressed in roots, rosettes and flowers.
SAY1; Isolated as a suppressor of a dominant mutant in the Ara4 gene that was expressed in yeast ypt1 mutant strains. A novel protein with a small region of similarity to coil-coiled domain of yeast VSP27 protein.
catalytic/ hydrolase; haloacid dehalogenase-like hydrolase family protein, similar to genetic modifier (Zea mays) GI:10444400; contains InterPro accession IPR005834: Haloacid dehalogenase-like hydrolase
bile acid:sodium symporter; bile acid:sodium symporter family protein, low similarity to SP|Q12908 Ileal sodium/bile acid cotransporter {Homo sapiens}; contains Pfam profile PF01758: Sodium Bile acid symporter family
unknown protein
oxidoreductase/ zinc ion binding; oxidoreductase, zinc-binding dehydrogenase family protein, low similarity to probable NADP-dependent oxidoreductase (zeta-crystallin homolog) P1 (SP|Q39172)(gi:886428) and P2 (SP|Q39173)(gi:886430); contains Pfam profile PF00107: oxidoreductase, zinc-binding dehydrogenase family
probable photosystem I chain XI precursor
fasciclin-like arabinogalactan protein FLA2
dopamine beta-monooxygenase; auxin-responsive protein, putative, similar to auxin-induced protein AIR12 GI:11357190 (Arabidopsis thaliana)
putative protein
unknown protein; expressed protein
unknown protein
cytochrome P450 monooxygenase (CYP83A1)
ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / nucleic acid binding; mRNA for glycine-rich RNA-binding protein (AtGRP2)
unknown protein; expressed protein, similar to UV-B and ozone similarly regulated protein 1 UOS1 (Pisum sativum) GI:20339364
cyclic-nucleotide phosphodiesterase; cyclic phosphodiesterase, identical to cyclic phosphodiesterase (Arabidopsis thaliana) gi|2065013|emb|CAA72363
unknown protein; similar to expressed protein [Arabidopsis thaliana] (TAIR:At5g45020.1); similar to COG0435: Predicted glutathione S-transferase [Mesorhizobium sp. BNC1] (GB:ZP_00194630.1)
small GTP-binding protein - like
CLV1 receptor kinase like protein
hyuC-like protein
catalytic; fatty acid hydroxylase, putative, similar to fatty acid hydroxylase Fah1p GB:AF021804 GI:2736147 from (Arabidopsis thaliana)
TOM1 (TOBAMOVIRUS MULTIPLICATION 1); encodes a host factor that is required for TMV virus multiplication.
hydrolase, hydrolyzing O-glycosyl compounds; glycosyl hydrolase family 1 protein, contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to dalcochinin 8'-O-beta-glucoside beta-glucosidase precursor (GI:6118076) (Dalbergia cochinchinensis)
unknown protein
adenine phosphoribosyltransferase/ transferase; adenine phosphoribosyltransferase, putative, strong similarity to Adenine phosphoribosyltransferase (Hordeum vulgare subsp. vulgare) GI:9711921; contains Pfam profile PF00156: Phosphoribosyl transferase domain
Acyl-CoA independent ceramide synthase (AtCES1)
unknown protein; expressed protein
unknown protein; tetratricopeptide repeat (TPR)-containing protein, similar to Hsc70-interacting protein (Hip) from {Homo sapiens} SP|P50502, {Rattus norvegicus} SP|P50503; contains Pfam profile PF00515: tetratricopeptide repeat (TPR) domain
rhodopsin-like receptor; hydroxyproline-rich glycoprotein family protein, contains proline-rich extensin domains, INTERPRO:IPR002965
serine/threonine kinase - like protein
PIP1;5/PIP1D; water channel; major intrinsic family protein / MIP family protein, contains Pfam profile: MIP PF00230
transcription factor; high mobility group (HMG1/2) family protein, similar to HMG2B (Homo sapiens) GI:32335; contains Pfam profile PF00505: HMG (high mobility group) box
unknown protein; reticulon family protein (RTNLB1), weak similarity to Nogo-C protein (Rattus norvegicus) GI:6822251; contains Pfam profile PF02453: Reticulon
SGT1A; Closely related to SGT1B, may function in SCF(TIR1) mediated protein degradation
transcription factor IIA small subunit
putative alliin lyase
protein translocase; protein transport protein SEC61 gamma subunit, putative, similar to Swiss-Prot:Q19967 protein transport protein SEC61 gamma subunit (Caenorhabditis elegans)
P-glycoprotein-2 (pgp2)
pyridoxal phosphate binding; alanine racemase family protein, contains Pfam domain, PF01168: Alanine racemase, N-terminal domain
AR192; adenyl-nucleotide exchange factor/ chaperone binding / protein homodimerization; mRNA for AR192, complete cds
putative APG protein
PPX1; protein serine/threonine phosphatase; Encodes catalytic subunit of protein phosphatase X. Expressed at very low levels in A. thaliana flowers, leaves, stems and roots.
hydrogen-transporting ATP synthase, rotational mechanism / hydrogen-transporting ATPase, rotational mechanism; ATP synthase subunit H family protein, contains similarity to Swiss-Prot:O15342 Vacuolar ATP synthase subunit H (V-ATPase H subunit) (Vacuolar proton pump H subunit) (V-ATPase M9.2 subunit) (V-ATPase 9.2 kDa membrane accessory protein) (Homo sapiens)
RNA binding / nucleic acid binding; similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:At5g55550.3); similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:At5g55550.2); similar to RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] (TAIR:At5g55550.1); similar to putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] (GB:AAP54226.1); contains InterPro domain RNA-binding region RNP-1 (RNA recognition motif) (InterPro:IPR000504)
unknown protein
COP1-interacting protein 7 (CIP7)
ubiquitin-protein ligase/ zinc ion binding; seven in absentia (SINA) family protein, similar to siah-1A protein (Mus musculus) GI:297035; contains Pfam profile PF03145: Seven in absentia protein family
AAC3 (ADP/ATP CARRIER 3); ATP:ADP antiporter/ binding; Encodes a mitochondrial ADP/ATP carrier protein. Shown in heterologous systems to be located in the plasma membrane. Has comparable affinity for ADP and ATP (in E.coli).
unknown protein
gamma-glutamyltransferase-like protein
Ca2+-transporting ATPase - like protein
MTO2 (METHIONINE OVER-ACCUMULATOR); threonine synthase; threonine synthase
arginine methyltransferase (pam1)
electron transporter/ thiol-disulfide exchange intermediate; thioredoxin family protein, contains Pfam profile PF00085: Thioredoxin
unknown protein; expressed protein, contains Pfam PF05620: Protein of unknown function (DUF788)
unknown protein; WD-40 repeat protein family
unknown protein
putative protein
beta-1,3-glucanase 5
CIPK6 (CBL-INTERACTING PROTEIN KINASE 6); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase; CBL-interacting protein kinase 6 (CIPK6) mRNA, complete cds
unknown protein; expressed protein
unknown protein; similar to DNA repair ATPase-related [Arabidopsis thaliana] (TAIR:At2g24420.2); similar to DNA repair ATPase-related [Arabidopsis thaliana] (TAIR:At2g24420.1); similar to unknown [Oryza sativa (japonica cultivar-group)] (GB:AAO72581.1)
TAFII15; transcription factor; AF344879 Arabidopsis thaliana putative TBP-associated 15 kDa subunit protein (TAFII15) mRNA, complete cds
unknown protein
glycine hydroxymethyltransferase; glycine hydroxymethyltransferase, putative / serine hydroxymethyltransferase, putative / serine/threonine aldolase, putative, similar to serine hydroxymethyltransferase (Chlamydomonas reinhardtii) GI:17066746; contains Pfam profile PF00464: serine hydroxymethyltransferase
unknown protein; centromeric protein-related, low similarity to SP|Q02224 Centromeric protein E (CENP-E protein) {Homo sapiens}
sucrose export defective 1 precursor (SXD1)
nucellin -like protein
amidophosphoribosyltransferase 2 precursor
RNA binding; ribosome-binding factor A family protein, contains PFam PF02033: Ribosome-binding factor A
unknown protein; expressed protein
CLB6 (CHLOROPLAST BIOGENESIS); mutant has Albino seedling; LYTB Enzyme in MEB Isoprenoid Biosynthesis clb6 mutant confirms posttranscriptional regulation of MEP biosynthesis,
structural constituent of ribosome; 40S ribosomal protein S25, putative
vacuolar H+-transporting ATPase 16K chain
catalase
unknown protein; pentatricopeptide (PPR) repeat-containing protein, low similarity to CRP1 (Zea mays) GI:3289002; contains Pfam profile PF01535: PPR repeat
oxidoreductase; squalene monooxygenase, putative / squalene epoxidase, putative, similar to SP|O65404 (SE 1,1), SP|O65402 (SE 1,2), SP|O65403 (SE 2)
unknown protein; expressed protein, contains Pfam PF05742: Protein of unknown function (DUF833)
transcription factor/ zinc ion binding; zinc finger (B-box type) family protein, zinc finger protein - Oryza sativa, PID:d1034167
calcium ion binding; calcium-binding EF hand family protein, contains INTERPRO:IPR002048 calcium-binding EF-hand domain
unknown protein
putative protein
putative protein
histone deacetylase like protein
putative protein
unknown protein; expressed protein, contains similarity to defective chloroplasts and leaves protein SP:Q42463 from (Lycopersicon esculentum)
ATPHS2; phosphorylase/ transferase, transferring glycosyl groups; Encodes a cytosolic alpha-glucan phosphorylase.
dUTP diphosphatase/ hydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase family, contains Pfam profile: PF00692 deoxyuridine 5'-triphosphate nucleotidohydrolase
DNA binding / transcription factor; Dof-type zinc finger domain-containing protein, identical to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana)
DNA binding / transcription factor; basic helix-loop-helix (bHLH) family protein, contains Pfam profile: PF00010 helix-loop-helix DNA-binding domain
putative protein
unknown protein
protein kinase (cdc2)
unknown protein; bacterial transferase hexapeptide repeat-containing protein, contains Pfam profile PF00132: Bacterial transferase hexapeptide (four repeats); ferripyochelin binding protein - Methanobacterium thermoautotrophicum, EMBL:AE000918.1
CASEIN KINASE II, ALPHA CHAIN 2 (CK II)
predicted GPI-anchored protein
RNA helicase -like protein
electron transporter/ thiol-disulfide exchange intermediate; thioredoxin family protein, low similarity to SP|P29451 Thioredoxin (Rhesus macaque) {Macaca mulatta}; contains Pfam profile: PF00085 Thioredoxin
plasma membrane intrinsic protein 2a
unknown protein; expressed protein
kinase; pfkB-type carbohydrate kinase family protein, contains Pfam profile: PF00294 pfkB family carbohydrate kinase
ATPUMP1 (UNCOUPLING PROTEIN PUMP2); binding / oxidative phosphorylation uncoupler; member of Uncoupling protein PUMP2 family
unknown protein
Gluthatione reductase, chloroplast precursor
sugar binding; sugar isomerase (SIS) domain-containing protein / CBS domain-containing protein, similar to SP|Q47334 Polysialic acid capsule expression protein kpsF {Escherichia coli}; contains Pfam profiles PF01380: sugar isomerase (SIS) domain, PF00571: CBS domain
unknown protein; expressed protein
DNA binding; histone H2A.F/Z, identical to GI:2407800
ATPDIL1-3; electron transporter/ isomerase/ thiol-disulfide exchange intermediate; Encodes a protein disulfide isomerase-like (PDIL) protein, a member of a multigene family within the thioredoxin (TRX) superfamily.
structural constituent of ribosome; 60S ribosomal protein L35 (RPL35C), various ribosomal L35 proteins
unknown protein
MAP kinase phosphatase (MKP1)
phosphoinositide phospholipase C/ phospholipase C; phosphoinositide-specific phospholipase C, putative, similar to phosphoinositide specific phospholipase C GI:857374 from (Arabidopsis thaliana)
zinc ion binding; similar to LIM domain-containing protein [Arabidopsis thaliana] (TAIR:At2g39900.1); similar to LIM domain protein [Gossypium hirsutum] (GB:AAL38006.1); contains InterPro domain Zn-binding protein, LIM (InterPro:IPR001781)
unknown protein; expressed protein
putative protein kinase
N2,N2-dimethylguanosine tRNA methyltransferases-like protein
beta-1,3-glucanase
AT103 (DICARBOXYLATE DIIRON 1); Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site.
strictosidine synthase; strictosidine synthase family protein, similar to strictosidine synthase (Rauvolfia serpentina)(SP|P15324)
AP2 transcription factor - like protein
3-isopropylmalate dehydratase-like protein (small subunit)
unknown protein (At3g59400)
unknown protein
S-adenosylmethionine-dependent methyltransferase/ catalytic/ methyltransferase; expressed protein, low similarity to PIR|I46078 endothelin converting enzyme from Bos primigenius taurus
VAP27-1 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1); structural molecule; Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER.
unknown protein; F-box family protein, contains weak hit to Pfam PF00646: F-box domain; stamina pistilloidia (Stp) - Pisum sativum, EMBL:AF004843
ATCYSC1; L-3-cyanoalanine synthase/ cysteine synthase; AtcysC1 mRNA for cysteine synthase, complete cds
plasma membrane intrinsic protein 1a
DNA binding / transcription factor; homeobox-leucine zipper family protein / homeodomain GLABRA2 like protein 1 (HD-GL2-1), similar to Anthocyaninless2 (ANL2) (GP:5702094) Arabidopsis thaliana, EMBL:AF077335
unknown protein
unknown protein; expressed protein, hypothetical protein - Synechocystis sp. (strain PCC 6803), PIR:S75899
unknown protein; C2 domain-containing protein, contains similarity to shock protein SRC2 (Glycine max) gi|2055230|dbj|BAA19769 ; contains Pfam profile PF00168:C2 domain
ABC transporter-like protein
CCD1 (CAROTENOID CLEAVAGE DIOXYGENASE 1); 9-cis-epoxycarotenoid dioxygenase / neoxanthin cleavage enzyme / NCED1 / carotenoid cleavage dioxygenase 1 (CCD1), identical to putative 9-cis-epoxy-carotenoid dioxygenase (GI:3096910); contains Pfam profile PF03055: Retinal pigment epithelial membrane protein
unknown protein; expressed protein
C3HC4 type Zinc RING finger like protein
unknown protein
OHP (ONE HELIX PROTEIN); Encodes a one helix protein homologous to cyanobacterial high-light inducible proteins. The protein is localized to the thylakoid membrane and its transcript is transiently induced by exposure to high light conditions.
amino acid permease; amino acid transporter family protein, belongs to INTERPRO:IPR002422 amino acid/polyamine transporter, family II
unknown protein
unknown protein
DNA binding / transcription factor; similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:At3g09600.1); similar to myb family transcription factor-like [Oryza sativa (japonica cultivar-group)] (GB:BAD29385.1); contains InterPro domain Myb DNA-binding domain (InterPro:IPR001005); contains InterPro domain Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447)
nucleobase transporter; permease, cytosine/purines, uracil, thiamine, allantoin family protein, contains Pfam PF02133: permease, cytosine/purines, uracil, thiamine, allantoin family
1,4-alpha-glucan branching enzyme protein soform SBE2.2 precursor
unknown protein; expressed protein
unknown protein; expressed protein, similar to unknown protein (pir||T08447)
bis(5'-nucleosyl)-tetraphosphatase (asymmetrical); diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase, putative, similar to diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase from (Lupinus angustifolius) GI:1888557, (Hordeum vulgare subsp. vulgare) GI:2564253; contains Pfam profile PF00293: NUDIX domain
nucleoid DNA-binding-like protein
calcium ion binding; calnexin, putative, identical to calnexin homolog 2 from Arabidopsis thaliana (SP|Q38798), strong similarity to calnexin homolog 1, Arabidopsis thaliana, EMBL:AT08315 (SP|P29402); contains Pfam profile PF00262 calreticulin family
unknown protein; glycosyl hydrolase family protein 17, similar to beta-1,3-glucanase GI:15150341 from (Camellia sinensis); C-terminal homology only
putative protein
ATP binding / ATP-dependent helicase/ helicase/ nucleic acid binding; DEAD box RNA helicase (RH26), strong similarity to RNA helicase RH26 (Arabidopsis thaliana) GI:3776025; contains Pfam profiles PF00270: DEAD/DEAH box helicase, PF00271: Helicase conserved C-terminal domain; identical to cDNA DEAD box RNA helicase, RH26 GI:3776024
putative protein
unknown protein
14-3-3-like protein AFT1
DNA binding; histone H3, identical to several histone H3 proteins, including Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
serine/threonine protein kinase -like protein
unknown protein
peptide transporter - like protein
24-sterol C-methyltransferase
unknown protein
GUN5 (GENOMES UNCOUPLED 5); Encodes magnesium chelatase involved in plastid-to-nucleus signal transduction.
Unknown protein (MXE10.5)
unknown protein; nodulin family protein, similar to nodulin-like protein (Arabidopsis thaliana) GI:3329368, nodule-specific protein Nlj70 (Lotus japonicus) GI:3329366
DNA binding / transcription factor; bHLH family protein
unknown protein; expressed protein, similar to unknown protein (pir||T41692)
APG5 (autophagy 5)-like protein
eukaryotic cap-binding protein (gb|AAC17220.1)
unknown protein
unknown protein
ATP binding / ATP-dependent helicase/ DNA binding / DNA-dependent ATPase/ helicase/ nucleic acid binding; DNA-dependent ATPase, putative, similar to DNA-dependent ATPase SNF2H (Mus musculus) GI:14028669; contains Pfam profiles PF00271: Helicase conserved C-terminal domain, PF00176: SNF2 family N-terminal domain, PF00249: Myb-like DNA-binding domain
unknown protein
unknown protein
HMGB6; transcription factor; Encodes a protein belonging to the subgroup of HMGB (high mobility group B) proteins
protein binding; c-myc binding protein, putative / prefoldin, putative, similar to Swiss-Prot:Q99471 prefoldin subunit 5 (C-myc binding protein Mm-1) (Myc modulator 1) (Homo sapiens)
unknown protein; MD-2-related lipid recognition domain-containing protein / ML domain-containing protein, contains Pfam profile PF02221: ML domain
transferase, transferring glycosyl groups; starch synthase, putative, similar to starch synthase I-1 GI:9369334 from (Triticum aestivum)
triacylglycerol lipase; lipase class 3 family protein, contains Pfam profile PF01764: Lipase
SQP1; squalene monooxygenase gene homolog
unknown protein
DNA helicase-like
THI2.2.2 (THIONIN 2.2); toxin receptor binding; thionin (Thi2.2) mRNA, complete cds
unknown protein; expressed protein
calmodulin 1 (CAM1)
putative protein
unknown protein; expressed protein
unknown protein
unknown protein; rhomboid family protein, contains Pfam profile PF01694: Rhomboid family
unknown protein; expressed protein
unknown protein; pentatricopeptide (PPR) repeat-containing protein, contains Pfam profile PF01535: PPR repeat
hydrolase, hydrolyzing O-glycosyl compounds; raffinose synthase family protein, similar to galactinol-raffinose galactosyltransferase (Vigna angularis) GI:6634701, seed imbibition protein GB:AAA32975 GI:167100 from (Hordeum vulgare); contains Pfam profile PF05691: Raffinose synthase or seed imbibition protein Sip1
thioredoxin
unknown protein
unknown protein; expressed protein
EMB3012; expressed protein, ; expression supported by MPSS
anion channel protein (gb|AAC05742.1)
unknown protein
DNA polymerase alpha subunit IV (primase)-like protein
unknown protein; expressed protein, similar to unknown protein (dbj|BAA92898.1)
putative protein
unknown protein
unknown protein
electron carrier; FAD-binding domain-containing protein, similar to SP|P30986 reticuline oxidase precursor (Berberine-bridge-forming enzyme) (BBE) (Tetrahydroprotoberberine synthase) (Eschscholzia californica); contains PF01565 FAD binding domain
ribose-5-phosphate isomerase; ribose 5-phosphate isomerase-related, low similarity to SP|P47968 Ribose 5-phosphate isomerase (EC 5.3.1.6) (Phosphoriboisomerase) {Mus musculus}
NRPC2; DNA binding / DNA-directed RNA polymerase; Encodes a subunit of RNA polymerase III (aka RNA polymerase C).
ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase; protein kinase, putative, contains similarity to male germ cell-associated kinase (Homo sapiens) gi|23268497|gb|AAN16405
unknown protein
CIPK20 (CBL-INTERACTING PROTEIN KINASE 20); kinase; Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain.
ATP binding / DNA binding / DNA-dependent ATPase/ nucleoside-triphosphatase/ nucleotide binding; DNA replication licensing factor, putative, similar to SP|Q43704 DNA replication licensing factor MCM3 homolog (Replication origin activator) (ROA protein) {Zea mays}; contains Pfam profile PF00493: MCM2/3/5 family
DNA binding / transcription factor; basic helix-loop-helix (bHLH) family protein, contains similarity to bHLH DNA-binding protein
Lil3 protein
unknown protein
ATSDAT/ATTDT; malate transporter/ sodium:dicarboxylate symporter; Encodes a tonoplast malate/fumarate transporter.
unknown protein
unknown protein; expressed protein
chromosome condensation protein
unknown protein
NaCl-inducible Ca2+-binding protein-like; calmodulin-like
cellulase homolog OR16pep precursor (pir||S71215)
unknown protein
protein translocation complex Sec61 gamma chain (pir||T05513)
CPI1 (CYCLOPROPYL ISOMERASE); Converts pentacyclic cyclopropyl sterols to conventional tetracyclic sterols.
oxidoreductase; short-chain dehydrogenase/reductase (SDR) family protein, similar to sterol-binding dehydrogenase steroleosin GI:15824408 from (Sesamum indicum)
unknown protein
unknown protein; nodulin MtN3 family protein, similar to MtN3 GI:1619602 (root nodule development) from (Medicago truncatula)
metal ion binding; heavy-metal-associated domain-containing protein, contains Pfam profile PF00403: Heavy-metal-associated domain
unknown protein
unknown protein (At5g53070)
SPDS3 (SPERMIDINE SYNTHASE 3); encodes a novel spermine synthase and is a paralog of previously characterized spermidine synthases, SPDS1 and SPDS2. SPDS3 forms heterodimers with SDPS2, which in turn forms heterodimers with SDPS1 in vivo. The gene does not complement speDelta3 deficiency of spermidine synthase in yeast but DOES complement speDelta4 deficiency.
TRY; DNA binding / transcription factor; myb family transcription factor (TRIPTYCHON), contains Pfam profile: PF00249 myb-like DNA-binding domain
tyrosine aminotransferase
ATMAMI (ARABIDOPSIS THALIANA MEMBRANE-ASSOCIATED MANNITOL-INDUCED); structural molecule; Encodes a highly polar protein with more than 60% hydrophilic amino acid residues that is associated with the plasma membrane. It has limited secondary structure similarity to VAP-33 from Aplysia, which may be involved in membrane trafficking.
putative protein
unknown protein; expressed protein
Fh5 (FORMIN HOMOLOGY5); actin binding; Encodes a protein with similarity to formins that is involved in cytokinesis. Loss of function mutations exhibit delayed cellularization during endosperm development. FH5 is expressed in the endosperm and the protein localizes to the cell plate.
unknown protein
unknown protein
translation initiation factor; eukaryotic translation initiation factor SUI1, putative, similar to SP|P32911 Protein translation factor SUI1 {Saccharomyces cerevisiae}; contains Pfam profile PF01253: Translation initiation factor SUI1
cell division protein FtsZ chloroplast homolog precursor (sp|Q42545)
unknown protein; expressed protein
unknown protein
lipid binding; protease inhibitor/seed storage/lipid transfer protein (LTP) family protein, contains Pfam protease inhibitor/seed storage/LTP family domain PF00234
unknown protein
nucleic acid binding; CwfJ-like family protein / zinc finger (CCCH-type) family protein, contains Pfam domain, PF00642: Zinc finger C-x8-C-x5-C-x3-H type (and similar), PF04677: Protein similar to CwfJ C-terminus 1, PF04676: Protein similar to CwfJ C-terminus 2
catalytic/ lactoylglutathione lyase; lactoylglutathione lyase family protein / glyoxalase I family protein, contains Pfam PF00903: glyoxalase family protein
porin-like protein
transcription factor/ zinc ion binding; zinc finger (B-box type) family protein, contains Pfam domain, PF00643: B-box zinc finger
unknown protein
unknown protein; expressed protein
GTP binding protein-like
unknown protein (At5g58220)
unknown protein; expressed protein
ROC7; peptidyl-prolyl cis-trans isomerase; cyclophilin (ROC7) mRNA, complete cds
unknown protein; similar to selenoprotein-related [Arabidopsis thaliana] (TAIR:At3g47300.1); similar to P0446G04.25 [Oryza sativa (japonica cultivar-group)] (GB:NP_915340.1); contains InterPro domain Proline-rich region (InterPro:IPR000694)
unknown protein (At5g58930)
FTSH9; ATP-dependent peptidase/ ATPase/ metallopeptidase; encodes an FtsH protease that is localized to the chloroplast
peptidase/ subtilase; subtilase family protein, contains similarity to prepro-cucumisin GI:807698 from (Cucumis melo)
MBD6; DNA binding; Protein containing methyl-CpG-binding domain.Has sequence similarity to human MBD proteins.
GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phoshate synthase - like protein
unknown protein
DNA binding; histone H2A, putative, similar to histone H2A Petroselinum crispum SP|P19177, Lycopersicon esculentum SP|P25469, Zea mays SP|P40280; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
protein binding; similar to exocyst subunit EXO70 family protein [Arabidopsis thaliana] (TAIR:At3g29400.1); similar to putative leucine zipper-containing protein [Oryza sativa (japonica cultivar-group)] (GB:XP_465879.1); contains InterPro domain Exo70 exocyst complex subunit (InterPro:IPR004140)
unknown protein
unknown protein
unknown protein; expressed protein
PSI-N; calmodulin binding; Encodes the only subunit of photosystem I located entirely in the thylakoid lumen. May be involved in the interaction between plastocyanin and the photosystem I complex.
3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase; 3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative, similar to SP|Q42546 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) {Arabidopsis thaliana}; contains Pfam profile PF00459: Inositol monophosphatase family
unknown protein
XYL4; hydrolase, hydrolyzing O-glycosyl compounds; beta-xylosidase
ATATH13; Encodes a member of ATH subfamily of ATP-binding cassette (ABC) proteins.
ABC transporter protein 1-like
unknown protein
DNA binding; histone H3, identical to histone H3 from Zea mays SP|P05203, Medicago sativa GI:166384, Encephalartos altensteinii SP|P08903, Pisum sativum SP|P02300; contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
hydrolase, hydrolyzing O-glycosyl compounds; (1-4)-beta-mannan endohydrolase, putative, similar to (1-4)-beta-mannan endohydrolase (Coffea arabica) GI:10178872; contains Pfam profile PF00150: Cellulase (glycosyl hydrolase family 5)
unknown protein; expressed protein
pectinesterase like protein
putative protein
FAD binding / oxidoreductase; nitrogen regulation family protein, similar to unknown protein (gb|AAF51525.1) ; contains Pfam domain PF01207: Dihydrouridine synthase (Dus); similar to (SP:P45672) NIFR3-like protein (SP:P45672) (Azospirillum brasilense)
unknown protein
ABA1 (ABA DEFICIENT 1); zeaxanthin epoxidase; Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.
unknown protein; expressed protein
CKA1; kinase; ATPK12D mRNA for casein kinase II catalytic subunit,
unknown protein; expressed protein, similar to expressed protein [Arabidopsis thaliana] (TAIR:At5g57340.2); similar to expressed protein [Arabidopsis thaliana] (TAIR:At5g57340.1); similar to hypothetical protein [Oryza sativa (japonica cultivar-group)] (GB:XP_469866.1)
unknown protein
cytochrome P450-like protein
early nodulin-like 3 predicted GPI-anchored protein
unknown protein
pectin acetylesterase precursor - like protein
signal peptidase; signal peptidase subunit family protein, contains Pfam profile: PF04573 signal peptidase subunit
sugar-porter family protein 2 (SFP2)
catalytic/ protein phosphatase type 2C
unknown protein; hypoxia-responsive family protein, contains Pfam profile: PF04588 hypoxia induced protein conserved region
ATCYSD2; catalytic/ cysteine synthase; AtcysD2 mRNA for cysteine synthase, complete cds
catalytic/ cysteine synthase; cysteine synthase, putative / O-acetylserine (thiol)-lyase, putative / O-acetylserine sulfhydrylase, putative, similar to O-acetylserine(thiol) lyase (Brassica juncea) GI:2245144; contains Pfam profile PF00291: Pyridoxal-phosphate dependent enzyme
putative protein
ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide binding / protein binding; heat shock protein 100, putative / HSP100, putative / heat shock protein clpB, putative / HSP100/ClpB, putative, similar to HSP100/ClpB GI:9651530 (Phaseolus lunatus)
unknown protein; gibberellin-regulated family protein, similar to SP|P46689 Gibberellin-regulated protein 1 precursor {Arabidopsis thaliana}; contains Pfam profile PF02704: Gibberellin regulated protein
metal ion binding; heavy-metal-associated domain-containing protein, Pfam profile PF00403: Heavy-metal-associated domain
seed maturation -like protein
unknown protein; expressed protein
COL1 (CONSTANS-LIKE 1); transcription factor/ zinc ion binding; Homologous to the flowering-time gene CONSTANS.
DNA binding / transcription factor; bZIP transcription factor family protein, similar to common plant regulatory factor 7 GI:9650828 from (Petroselinum crispum); contains Pfam profile: PF00170 bZIP transcription factor
unknown protein
RING-H2 zinc finger protein-like
TOM (target of myb1) -like protein
unknown protein
putative protein
SULTR3;1 (SULFATE TRANSPORTER 1); sulfate porter/ sulfate transporter; Arabidopsis thaliana mRNA for sulfate transporter, complete cds.
ACX4 (ACYL-COA OXIDASE 4); oxidoreductase; Encodes a short-chain acyl-CoA oxidase, which catalyzes the first step of peroxisomal fatty acid beta-oxidation during early, post-germinative growth in oilseed species. Null mutants virtually lack short-chain acyl-CoA and are resistant to 2,4-dichlorophenoxybutyric acid, which is converted to the herbicide and auxin analogue 2,4-dichlorophenoxyacetic acid by beta-oxidation. Despite the almost complete loss of short-chain activity, lipid catabolism and seedling growth and establishment was unaltered in the acx4 mutant. However, double mutants in acx3acx4 (acx3 encodes medium chain acyl CoA oxidase) were not viable and arrested during embryogenesis.
transcription regulator; brassinosteroid signalling positive regulator-related, contains similarity to BZR1 protein (Arabidopsis thaliana) gi|20270971|gb|AAM18490
unknown protein; pentatricopeptide (PPR) repeat-containing protein, low similarity to fertility restorer (Petunia x hybrida) GI:22128587; contains Pfam profile PF01535: PPR repeat; identical to cDNA membrane-associated salt-inducible protein like GI:2632060
catalytic/ hydrolase; hydrolase, alpha/beta fold family protein, low similarity to hydrolase (Sphingomonas sp.) GI:3426124; contains Pfam profile PF00561: hydrolase, alpha/beta fold family
structural molecule; plastid-lipid associated protein PAP-related / fibrillin-related, weak hit to Pfam profile PF04755: PAP_fibrillin
transferase, transferring glycosyl groups; sucrose-phosphate synthase, putative, similar to sucrose-phosphate synthase (EC 2.4.1.14) isoform 1 - Citrus unshiu, EMBL:AB005023
unknown protein; expressed protein
unknown protein
N-acetyltransferase; GCN5-related N-acetyltransferase (GNAT) family protein, low similarity to SP|P09453 Ribosomal-protein-alanine acetyltransferase (EC 2.3.1.128) {Escherichia coli}; contains Pfam profile PF00583: acetyltransferase, GNAT family
LHCA5; chlorophyll A-B binding protein, putative (LHCA5), identical to Lhca5 protein (Arabidopsis thaliana) GI:4741942; contains Pfam profile: PF00504 chlorophyll A-B binding protein; similar to light-harvesting complex protein GI:22752 from (Pinus sylvestris)
CIPK23 (CBL-INTERACTING PROTEIN KINASE 23); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase; Arabidopsis thaliana CBL-interacting protein kinase 23 mRNA, complete cds
structural molecule; plastid-lipid associated protein PAP / fibrillin family protein, similar to plastid-lipid associated protein PAP2 (Brassica rapa) GI:14248550; contains Pfam profile PF04755: PAP_fibrillin
catalytic/ hydrolase
unknown protein; expressed protein
unknown protein
CIC7E11; protein binding / ubiquitin-protein ligase/ zinc ion binding; zinc finger (C3HC4-type RING finger) family protein, contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger)
unknown protein; expressed protein
putative galactinol synthase
catalytic; exostosin family protein, contains Pfam profile: PF03016 exostosin family
hypothetical protein
hypothetical protein
AT-RAB2; GTP binding; member of RAB gene family
RNA binding / RNA methyltransferase; tRNA/rRNA methyltransferase (SpoU) family protein, similar to TAR RNA loop binding protein (Homo sapiens) GI:1184692; contains Pfam profile PF00588: SpoU rRNA Methylase (RNA methyltransferase, TrmH) family
carnitine racemase like protein
ATTPS5; transferase, transferring glycosyl groups / trehalose-phosphatase; Encodes an enzyme putatively involved in trehalose biosynthesis. The protein has a trehalose synthase (TPS)-like domain that may or may not be active as well as a trehalose phosphatase (TPP)-like domain.
electron carrier/ electron transporter/ iron ion binding; ferredoxin family protein, similar to SP|P00252 Ferredoxin I from Nostoc muscorum, SP|P00248 Ferredoxin from Mastigocladus laminosus, SP|P00244 Ferredoxin I from Aphanizomenon flos-aquae; contains Pfam profile PF00111 2Fe-2S iron-sulfur cluster binding domain
unknown protein; lesion inducing protein-related, similar to ORF, able to induce HR-like lesions (Nicotiana tabacum) gi|1762945|gb|AAC49975
putative bHLH transcription factor  (bHLH104)
unknown protein
DNA-binding homeotic protein Athb-2
TUA6; encodes alpha-tubulin
CH1 (CHLORINA 1); chlorophyll a oxygenase; Encodes chlorophyll a oxidase which converts chlorophyllide A to chlorophyllide B by catalyzing two successive hydroxylations at the 7-methyl group of chlorophyllide A . Mutants are deficient in pigments that associate with thylakoid membrane proteins, lacking chlorophyll b and light-harvesting proteins of photosystem II.
RING finger -like protein
PSBY; PsbY precursor (psbY) mRNA, nuclear gene encoding
ATP binding / protein binding; chaperonin, putative, similar to SWISS-PROT:Q05046- chaperonin CPN60-2, mitochondrial precursor (HSP60-2) (Cucurbita maxima); contains Pfam:PF00118 domain, TCP-1/cpn60 chaperonin family
mitochondrial carrier like protein
CYP98A3; p-coumarate 3-hydroxylase; encodes coumarate 3-hydroxylase (C3H), a P450-dependent monooxygenase. Involved in lignin biosynthesis.
DPE2 (DISPROPORTIONATING ENZYME 2); 4-alpha-glucanotransferase/ catalytic; Encodes a cytosolic amylomaltase. It is an essential component of the pathway from starch to sucrose and cellular metabolism in leaves at night. Its role is probably to metabolize maltose exported from the chloroplast.
RPS2 (RIBOSOMAL PROTEIN S2); Chloroplast ribosomal protein S2