PartheenMetaData http://swegene.onk.lu.se Annotation Data (PartheenMetaData)

[Up] [Top]

Documentation for package ‘PartheenMetaData.db’ version 3.2.2

Help Pages

PartheenMetaData Bioconductor annotation data package
PartheenMetaData.db Bioconductor annotation data package
PartheenMetaDataACCNUM Map Manufacturer identifiers to Accession Numbers
PartheenMetaDataALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
PartheenMetaDataCHR Map Manufacturer IDs to Chromosomes
PartheenMetaDataCHRLENGTHS A named vector for the length of each of the chromosomes
PartheenMetaDataCHRLOC Map Manufacturer IDs to Chromosomal Location
PartheenMetaDataCHRLOCEND Map Manufacturer IDs to Chromosomal Location
PartheenMetaDataENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
PartheenMetaDataENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
PartheenMetaDataENTREZID Map between Manufacturer Identifiers and Entrez Gene
PartheenMetaDataENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
PartheenMetaDataENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
PartheenMetaDataGENENAME Map between Manufacturer IDs and Genes
PartheenMetaDataGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
PartheenMetaDataGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
PartheenMetaDataGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
PartheenMetaDataLOCUSID Map between Manufacturer Identifiers and Entrez Gene
PartheenMetaDataMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
PartheenMetaDataMAPCOUNTS Number of mapped keys for the maps in package PartheenMetaData.db
PartheenMetaDataOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
PartheenMetaDataORGANISM The Organism information for PartheenMetaData
PartheenMetaDataORGPKG The Organism information for PartheenMetaData
PartheenMetaDataPATH Mappings between probe identifiers and KEGG pathway identifiers
PartheenMetaDataPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
PartheenMetaDataPMID Maps between Manufacturer Identifiers and PubMed Identifiers
PartheenMetaDataPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
PartheenMetaDataREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
PartheenMetaDataSYMBOL Map between Manufacturer Identifiers and Gene Symbols
PartheenMetaDataUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
PartheenMetaDataUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
PartheenMetaDataUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
PartheenMetaData_dbconn Collect information about the package annotation DB
PartheenMetaData_dbfile Collect information about the package annotation DB
PartheenMetaData_dbInfo Collect information about the package annotation DB
PartheenMetaData_dbschema Collect information about the package annotation DB