Rank Product method for identifying differentially expressed genes with application in meta-analysis


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Documentation for package ‘RankProd’ version 2.42.0

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arab Genomic Response to Brassinosteroid in Arabidopsis
arab.cl Genomic Response to Brassinosteroid in Arabidopsis
arab.gnames Genomic Response to Brassinosteroid in Arabidopsis
arab.origin Genomic Response to Brassinosteroid in Arabidopsis
golub sub set of the Gene expression dataset from Golub et al. (1999)
golub.cl sub set of the Gene expression dataset from Golub et al. (1999)
golub.gnames sub set of the Gene expression dataset from Golub et al. (1999)
lym.exp Subset of the Intensity data for 8 cDNA slides with CLL and DLBL samples from the Alizadeh et al. paper in Nature 2000
plotGene Graphical Display of The expression levels
plotRP Graphical Display of the Rank Product/Sum analysis
RP Rank Product Analysis of Microarray
RPadvance Advanced Rank Product Analysis of Microarray
RSadvance Advanced Rank Sum Analysis of Microarray
topGene Output Significant Genes