Package: SNPlocs.Hsapiens.dbSNP.20110815 Title: SNP locations for Homo sapiens (dbSNP Build 134) Description: SNP locations and alleles for Homo sapiens extracted from NCBI dbSNP Build 134. The source data files used for this package were created by NCBI on Aug 15, 2011, and contain SNPs mapped to reference genome GRCh37.p2. WARNING: Note that the GRCh37.p2 genome is a patched version of GRCh37 but the patch doesn't alter chromosomes 1-22, X, Y, MT. GRCh37 itself is the same as the hg19 genome from UCSC *except* for the mitochondrion chromosome. Therefore, the SNPs in this package can be "injected" in BSgenome.Hsapiens.UCSC.hg19 and they will land at the correct location but this injection will exclude chrM (i.e. nothing will be injected in that sequence). Version: 0.99.7 Author: Herve Pages Maintainer: H. Pages Depends: R (>= 2.10), IRanges, GenomicRanges Imports: methods, S4Vectors, IRanges, GenomicRanges Suggests: Biostrings, BSgenome (>= 1.16.1), BSgenome.Hsapiens.UCSC.hg19 License: Artistic-2.0 organism: Homo sapiens species: Human provider: NCBI provider_version: 20110815 source_url: ftp://ftp.ncbi.nih.gov/snp/organisms/human_9606/ASN1_flat biocViews: AnnotationData, Genetics, Homo_sapiens Collate: 00datacache.R getSNPlocs.R COMPATIBLE_BSGENOMES.R zzz.R NeedsCompilation: no Packaged: 2015-08-10 18:45:50 UTC; hpages Built: R 3.2.3; ; 2016-10-26 22:47:54 UTC; unix