Package: SNPlocs.Hsapiens.dbSNP142.GRCh37 Title: SNP locations for Homo sapiens (dbSNP Build 142) Description: SNP locations and alleles for Homo sapiens extracted from NCBI dbSNP Build 142. The source data files used for this package were created by NCBI on October 14, 2014, and contain SNPs mapped to reference genome GRCh37.p13. WARNING: Note that the GRCh37.p13 genome is a patched version of GRCh37 but the patch doesn't alter chromosomes 1-22, X, Y, MT. GRCh37 itself is the same as the hg19 genome from UCSC *except* for the mitochondrion chromosome. Therefore, the SNPs in this package can be "injected" in BSgenome.Hsapiens.UCSC.hg19 and they will land at the correct location but this injection will exclude chrM (i.e. nothing will be injected in that sequence). Version: 0.99.5 Author: Herv\'e Pag\`es Maintainer: Simon Coetzee Depends: R (>= 2.10), IRanges, GenomeInfoDb, GenomicRanges, BSgenome (>= 1.25.6) Imports: methods, utils, IRanges, GenomeInfoDb, GenomicRanges, BSgenome Suggests: Biostrings, BSgenome.Hsapiens.UCSC.hg19, BSgenome.Hsapiens.UCSC.hg19.masked (>= 1.3.19) License: Artistic-2.0 organism: Homo sapiens species: Human provider: dbSNP provider_version: 20141014 release_date: October 14, 2014 release_name: Build 142 reference_genome: GRCh37.p13 download_url: ftp://ftp.ncbi.nih.gov/snp/organisms/human_9606_b142_GRCh37p13/ASN1_flat/ download_date: April 10, 2015 biocViews: AnnotationData, Genetics, Homo_sapiens NeedsCompilation: no Packaged: 2015-05-01 00:10:59 UTC; hpages Built: R 3.2.3; ; 2016-10-26 22:51:10 UTC; unix