# Sequence information for GRCh37.p13 assembly # -------------------------------------------- # # 2 ways to obtain the information reported in this file: # # (1) Extract information for ch1-22,X,Y from (choose assembly GRCh37.p13): # http://www.ncbi.nlm.nih.gov/projects/genome/assembly/grc/human/data/index.shtml # For chMT, look at 5th col in output of: # grep 'GRCh37\.p13' ds_flat_chMT.flat | grep 'chr=MT' | more # For the RefSeqID, then lookup RefSeqID on: # http://www.ncbi.nlm.nih.gov/nuccore/ # and, on the result page, click on "Identical GenBank Sequence" (on the # right, under "Related information") to get the GenBankID. # # (2) Alternatively, the same information can be found on NCBI assembly page # for GRCh37.p13 (RefSeq Assembly ID: GCF_000001405.25): # http://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.25/ # Click on "Download the full sequence report" (on the right, under "Access # the data") to get the GenBankID and RefSeqID for ch1-22,X,Y,MT. # # seqnames seqlengths isCircular GenBankID RefSeqID ch1 249250621 FALSE CM000663.1 NC_000001.10 ch2 243199373 FALSE CM000664.1 NC_000002.11 ch3 198022430 FALSE CM000665.1 NC_000003.11 ch4 191154276 FALSE CM000666.1 NC_000004.11 ch5 180915260 FALSE CM000667.1 NC_000005.9 ch6 171115067 FALSE CM000668.1 NC_000006.11 ch7 159138663 FALSE CM000669.1 NC_000007.13 ch8 146364022 FALSE CM000670.1 NC_000008.10 ch9 141213431 FALSE CM000671.1 NC_000009.11 ch10 135534747 FALSE CM000672.1 NC_000010.10 ch11 135006516 FALSE CM000673.1 NC_000011.9 ch12 133851895 FALSE CM000674.1 NC_000012.11 ch13 115169878 FALSE CM000675.1 NC_000013.10 ch14 107349540 FALSE CM000676.1 NC_000014.8 ch15 102531392 FALSE CM000677.1 NC_000015.9 ch16 90354753 FALSE CM000678.1 NC_000016.9 ch17 81195210 FALSE CM000679.1 NC_000017.10 ch18 78077248 FALSE CM000680.1 NC_000018.9 ch19 59128983 FALSE CM000681.1 NC_000019.9 ch20 63025520 FALSE CM000682.1 NC_000020.10 ch21 48129895 FALSE CM000683.1 NC_000021.8 ch22 51304566 FALSE CM000684.1 NC_000022.10 chX 155270560 FALSE CM000685.1 NC_000023.10 chY 59373566 FALSE CM000686.1 NC_000024.9 chMT 16569 TRUE J01415.2 NC_012920.1