attributePages |
Gives a summary of the attribute pages |
columns |
Retrieve information from the BioMart databases |
columns-method |
Retrieve information from the BioMart databases |
exportFASTA |
Exports getSequence results to FASTA format |
filterOptions |
Displays the filter options |
filterType |
Displays the filter type |
getBM |
Retrieves information from the BioMart database |
getBMlist |
Retrieves information from the BioMart database |
getGene |
Retrieves gene annotation information given a vector of identifiers |
getLDS |
Retrieves information from two linked datasets |
getSequence |
Retrieves sequences |
getXML |
Retrieves information from the BioMart database using an XML query |
keys |
Retrieve information from the BioMart databases |
keys-method |
Retrieve information from the BioMart databases |
keytypes |
Retrieve information from the BioMart databases |
keytypes-method |
Retrieve information from the BioMart databases |
listAttributes |
lists the attributes available in the selected dataset |
listDatasets |
lists the datasets available in the selected BioMart database |
listEnsembl |
lists the available BioMart databases hosted by Ensembl |
listFilters |
lists the filters available in the selected dataset |
listMarts |
lists the avilable BioMart databases |
Mart-class |
Class Mart |
NP2009code |
Display the analysis code from the 2009 Nature protocols paper |
select |
Retrieve information from the BioMart databases |
select-method |
Retrieve information from the BioMart databases |
select-methods |
Retrieve information from the BioMart databases |
show-method |
Class Mart |
useDataset |
Select a dataset to use and updates Mart object |
useEnsembl |
Connects to the selected BioMart database and dataset hosted by Ensembl |
useMart |
Connects to the selected BioMart database and dataset |