Package: dendextend Type: Package Title: Extending R's Dendrogram Functionality Version: 1.3.0 Date: 2016-07-15 Authors@R: c(person("Tal", "Galili", role = c("aut", "cre", "cph"), email = "tal.galili@gmail.com", comment = "http://www.r-statistics.com"), person("Gavin", "Simpson", role = "ctb"), person("Gregory","Jefferis", role = c("aut", "ctb"), email = "jefferis@gmail.com", comment ="imported code from his dendroextras package"), person("Marco", "Gallotta", role = "ctb", comment = "a.k.a: marcog") , person("Johan", "Renaudie", role = "ctb", comment = "https://github.com/plannapus"), person("The R Core Team", role = "ctb", comment = "Thanks for the Infastructure, and code in the examples"), person("Kurt", "Hornik", role = "ctb"), person("Uwe", "Ligges", role = "ctb"), person("Andrej-Nikolai", "Spiess", role = "ctb"), person("Steve", "Horvath",email = "SHorvath@mednet.ucla.edu", role = "ctb"), person("Peter", "Langfelder",email = "Peter.Langfelder@gmail.com", role = "ctb"), person("skullkey", role = "ctb"), person("Mark", "Van Der Loo", email = "mark.vanderloo@gmail.com", comment = "https://github.com/markvanderloo d3dendrogram", role = "ctb"), person("Andrie", "de Vries", email = "apdevries@gmail.com", comment = "ggdendro author", role = "ctb"), person("Zuguang", "Gu", email = "z.gu@dkfz-heidelberg.de", comment = "circlize author", role = "ctb"), person("Yoav", "Benjamini", role = "ths")) Description: Offers a set of functions for extending dendrogram objects in R, letting you visualize and compare trees of hierarchical clusterings. You can (1) Adjust a tree's graphical parameters - the color, size, type, etc of its branches, nodes and labels. (2) Visually and statistically compare different dendrograms to one another. Depends: R (>= 3.0.0) Imports: utils, stats, magrittr (>= 1.0.1), ggplot2, fpc, whisker Suggests: dendextendRcpp (>= 0.5.0), knitr, rmarkdown, testthat, seriation, colorspace, plyr, ape, profdpm, microbenchmark, gplots, NMF, heatmaply, d3heatmap, dynamicTreeCut, pvclust, corrplot, DendSer, MASS, cluster, circlize (>= 0.2.5), covr Enhances: ggdendro, labeltodendro,dendroextras, data.table, rpart VignetteBuilder: knitr LazyData: true License: GPL-2 | GPL-3 URL: https://cran.r-project.org/package=dendextend, https://github.com/talgalili/dendextend/, https://www.r-statistics.com/tag/dendextend/, https://bioinformatics.oxfordjournals.org/content/31/22/3718 BugReports: https://github.com/talgalili/dendextend/issues RoxygenNote: 5.0.1 NeedsCompilation: no Packaged: 2016-08-27 09:24:12 UTC; junior Author: Tal Galili [aut, cre, cph] (http://www.r-statistics.com), Gavin Simpson [ctb], Gregory Jefferis [aut, ctb] (imported code from his dendroextras package), Marco Gallotta [ctb] (a.k.a: marcog), Johan Renaudie [ctb] (https://github.com/plannapus), The R Core Team [ctb] (Thanks for the Infastructure, and code in the examples), Kurt Hornik [ctb], Uwe Ligges [ctb], Andrej-Nikolai Spiess [ctb], Steve Horvath [ctb], Peter Langfelder [ctb], skullkey [ctb], Mark Van Der Loo [ctb] (https://github.com/markvanderloo d3dendrogram), Andrie de Vries [ctb] (ggdendro author), Zuguang Gu [ctb] (circlize author), Yoav Benjamini [ths] Maintainer: Tal Galili Repository: CRAN Date/Publication: 2016-08-27 14:17:20 Built: R 3.2.3; ; 2016-10-26 17:31:52 UTC; unix