Affymetrix hta20 annotation data (chip hta20sttranscriptcluster)

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Documentation for package ‘hta20sttranscriptcluster.db’ version 8.3.1

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hta20sttranscriptcluster Bioconductor annotation data package
hta20sttranscriptcluster.db Bioconductor annotation data package
hta20sttranscriptclusterACCNUM Map Manufacturer identifiers to Accession Numbers
hta20sttranscriptclusterALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hta20sttranscriptclusterCHR Map Manufacturer IDs to Chromosomes
hta20sttranscriptclusterCHRLENGTHS A named vector for the length of each of the chromosomes
hta20sttranscriptclusterCHRLOC Map Manufacturer IDs to Chromosomal Location
hta20sttranscriptclusterCHRLOCEND Map Manufacturer IDs to Chromosomal Location
hta20sttranscriptclusterENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
hta20sttranscriptclusterENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
hta20sttranscriptclusterENTREZID Map between Manufacturer Identifiers and Entrez Gene
hta20sttranscriptclusterENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
hta20sttranscriptclusterENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
hta20sttranscriptclusterGENENAME Map between Manufacturer IDs and Genes
hta20sttranscriptclusterGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
hta20sttranscriptclusterGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
hta20sttranscriptclusterGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
hta20sttranscriptclusterLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hta20sttranscriptclusterMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hta20sttranscriptclusterMAPCOUNTS Number of mapped keys for the maps in package hta20sttranscriptcluster.db
hta20sttranscriptclusterOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hta20sttranscriptclusterORGANISM The Organism information for hta20sttranscriptcluster
hta20sttranscriptclusterORGPKG The Organism information for hta20sttranscriptcluster
hta20sttranscriptclusterPATH Mappings between probe identifiers and KEGG pathway identifiers
hta20sttranscriptclusterPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
hta20sttranscriptclusterPMID Maps between Manufacturer Identifiers and PubMed Identifiers
hta20sttranscriptclusterPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
hta20sttranscriptclusterREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hta20sttranscriptclusterSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hta20sttranscriptclusterUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hta20sttranscriptclusterUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
hta20sttranscriptclusterUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
hta20sttranscriptcluster_dbconn Collect information about the package annotation DB
hta20sttranscriptcluster_dbfile Collect information about the package annotation DB
hta20sttranscriptcluster_dbInfo Collect information about the package annotation DB
hta20sttranscriptcluster_dbschema Collect information about the package annotation DB