Affymetrix hugene11 annotation data (chip hugene11sttranscriptcluster)

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Documentation for package ‘hugene11sttranscriptcluster.db’ version 8.4.0

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hugene11sttranscriptcluster Bioconductor annotation data package
hugene11sttranscriptcluster.db Bioconductor annotation data package
hugene11sttranscriptclusterACCNUM Map Manufacturer identifiers to Accession Numbers
hugene11sttranscriptclusterALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
hugene11sttranscriptclusterCHR Map Manufacturer IDs to Chromosomes
hugene11sttranscriptclusterCHRLENGTHS A named vector for the length of each of the chromosomes
hugene11sttranscriptclusterCHRLOC Map Manufacturer IDs to Chromosomal Location
hugene11sttranscriptclusterCHRLOCEND Map Manufacturer IDs to Chromosomal Location
hugene11sttranscriptclusterENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
hugene11sttranscriptclusterENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
hugene11sttranscriptclusterENTREZID Map between Manufacturer Identifiers and Entrez Gene
hugene11sttranscriptclusterENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
hugene11sttranscriptclusterENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
hugene11sttranscriptclusterGENENAME Map between Manufacturer IDs and Genes
hugene11sttranscriptclusterGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
hugene11sttranscriptclusterGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
hugene11sttranscriptclusterGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
hugene11sttranscriptclusterLOCUSID Map between Manufacturer Identifiers and Entrez Gene
hugene11sttranscriptclusterMAP Map between Manufacturer Identifiers and cytogenetic maps/bands
hugene11sttranscriptclusterMAPCOUNTS Number of mapped keys for the maps in package hugene11sttranscriptcluster.db
hugene11sttranscriptclusterOMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
hugene11sttranscriptclusterORGANISM The Organism information for hugene11sttranscriptcluster
hugene11sttranscriptclusterORGPKG The Organism information for hugene11sttranscriptcluster
hugene11sttranscriptclusterPATH Mappings between probe identifiers and KEGG pathway identifiers
hugene11sttranscriptclusterPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
hugene11sttranscriptclusterPMID Maps between Manufacturer Identifiers and PubMed Identifiers
hugene11sttranscriptclusterPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
hugene11sttranscriptclusterREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
hugene11sttranscriptclusterSYMBOL Map between Manufacturer Identifiers and Gene Symbols
hugene11sttranscriptclusterUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
hugene11sttranscriptclusterUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
hugene11sttranscriptclusterUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
hugene11sttranscriptcluster_dbconn Collect information about the package annotation DB
hugene11sttranscriptcluster_dbfile Collect information about the package annotation DB
hugene11sttranscriptcluster_dbInfo Collect information about the package annotation DB
hugene11sttranscriptcluster_dbschema Collect information about the package annotation DB