Nonparametric testing of copy number induced differential gene expression

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Documentation for package ‘intCNGEan’ version 0.54

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intCNGEan-package INTegrative dna Copy Number and Gene Expression ANalysis
intCNGEan INTegrative dna Copy Number and Gene Expression ANalysis
intCNGEan.heatmaps Parellel CN and GE heatmap plotting
intCNGEan.match Genomic location matching of CN and GE data
intCNGEan.plot DNA-mRNA plot
intCNGEan.profilesPlot CN-GE profiles plot
intCNGEan.test Nonparametric testing for copy number induced differential gene expression.
intCNGEan.tune Pre-test and tuning.
pollackCN Breast cancer data (copy number)
pollackGE Breast cancer data (gene expression)