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| abuocc | Abundance/Occurrence Graphical Analysis |
| bestnmds | Nonmetric Multidimensional Scaling |
| brycesite | Site Data for Bryce Canyon National Park |
| bryceveg | Bryce Canyon Vegetation Data |
| chullord.nmds | Plotting Routines For Nonmetric Multi-Dimensional Scaling Ordinations |
| chullord.pca | Plotting Routines For Principal Components Ordinations |
| chullord.pco | Plotting Routines For Principal Coordinates Ordinations |
| compspec | Compositional Specificity Analysis |
| concov | Constancy-Coverage Table for Ecological Community Data |
| const | Constancy Table |
| dematrify | Create Three Column Database Form Data Frame from Sparse Data Frames |
| density.nmds | Plotting Routines For Nonmetric Multi-Dimensional Scaling Ordinations |
| density.pco | Plotting Routines For Principal Coordinates Ordinations |
| dga | Direct Gradient Analysis |
| disana | Dissimilarity Analysis |
| dropplt | Dropping Plots with Missing Values From Taxon and Site Data Frames |
| dropspc | Dropping Species with Few Occurrences |
| dsvdis | Dissimilarity Indices and Distance Measures |
| duarm | Indicator Species Analysis Minimizing Intermediate Occurrences |
| duleg | Dufrene-Legendre Indicator Species Analysis |
| envrtest | Environmental Distribution Test |
| euclidify | Nearest Euclidean Space Representation of a Dissimilarity Object |
| hilight.nmds | Plotting Routines For Nonmetric Multi-Dimensional Scaling Ordinations |
| hilight.pca | Plotting Routines For Principal Components Ordinations |
| hilight.pco | Plotting Routines For Principal Coordinates Ordinations |
| homoteneity | Homoteneity Analysis of Classified Ecological Communities |
| importance | Importance Table |
| indspc | Compositional Specificity Analysis |
| indval | Dufrene-Legendre Indicator Species Analysis |
| indval.default | Dufrene-Legendre Indicator Species Analysis |
| indval.stride | Dufrene-Legendre Indicator Species Analysis |
| isamic | Indicator Species Analysis Minimizing Intermediate Occurrences |
| loadings.pca | Principal Components Analysis |
| matrify | Create Taxon Data.Frames From Three Column Database Form |
| metrify | Nearest Metric Space Representation of a Dissimilarity Object |
| nmds | Nonmetric Multidimensional Scaling |
| ordcomp | Ordination to Dissimilarity Comparison |
| orddist | Ordination Point Pair-Wise Distance Calculation |
| ordpart | Ordination Partitioning |
| ordpart.nmds | Ordination Partitioning |
| ordpart.pca | Ordination Partitioning |
| ordpart.pco | Ordination Partitioning |
| ordtaxa | Re-Order the Rows and Columns of a Taxon Data Frame |
| ordtest | Ordination Distribution Test |
| pca | Principal Components Analysis |
| pco | Principal Coordinates Analysis |
| plot.compspec | Compositional Specificity Analysis |
| plot.nmds | Plotting Routines For Nonmetric Multi-Dimensional Scaling Ordinations |
| plot.pca | Plotting Routines For Principal Components Ordinations |
| plot.pco | Plotting Routines For Principal Coordinates Ordinations |
| plot.thull | Plotting a Tensioned Hull |
| plotid.nmds | Plotting Routines For Nonmetric Multi-Dimensional Scaling Ordinations |
| plotid.pca | Plotting Routines For Principal Components Ordinations |
| plotid.pco | Plotting Routines For Principal Coordinates Ordinations |
| points.nmds | Plotting Routines For Nonmetric Multi-Dimensional Scaling Ordinations |
| points.pca | Plotting Routines For Principal Components Ordinations |
| points.pco | Plotting Routines For Principal Coordinates Ordinations |
| raretaxa | Identify Rare Taxa in a Data Set |
| reconcile | Reconcile Taxa and Site Data.Frames |
| rnddist | Random Distance |
| rndtaxa | Randomize a Taxa Data.Frame |
| scores.pca | Principal Components Analysis |
| spcdisc | Species Discrimination Analysis |
| summary.indval | Dufrene-Legendre Indicator Species Analysis |
| summary.pca | Principal Components Analysis |
| surf.nmds | Plotting Routines For Nonmetric Multi-Dimensional Scaling Ordinations |
| surf.pca | Plotting Routines For Principal Components Ordinations |
| surf.pco | Plotting Routines For Principal Coordinates Ordinations |
| thull | Plotting a Tensioned Hull |
| thull.nmds | Plotting Routines For Nonmetric Multi-Dimensional Scaling Ordinations |
| thull.pco | Plotting Routines For Principal Coordinates Ordinations |
| varplot.pca | Plotting Routines For Principal Components Ordinations |
| vegtab | Vegetation Table |
| vegtrans | Vegetation Data Transformation |