import(methods) import(AnnotationDbi) ### Only put what is statically exported here. All the AnnObj instances ### created at load time are dynamically exported (refer to R/zzz.R for ### the details). export( mirbase, mirbase_dbconn, mirbase_dbfile, mirbase_dbschema, mirbase_dbInfo ) exportClasses("mirbaseContextBimap", "mirnaContext", ## CONTEXT "mirbaseLinksBimap", "mirnaLinks", ## LINKS "mirbaseMatureBimap", "mirnaMature", ## MATURE "mirbasePmidBimap", "mirnaPmid" ## PMID ) exportMethods("contextNumber", ## mirnaContext "contextOverlapSense", ## mirnaContext "contextOverlapType", ## mirnaContext "contextTranscriptID", ## mirnaContext "contextTranscriptSource", ## mirnaContext "contextTranscriptName", ## mirnaContext "linksDbId", ## mirnaLinks "linksDbLink", ## mirnaLinks "linksDbSecondary", ## mirnaLinks "matureAccession", ## mirnaMature "matureEvidence", ## mirnaMature "matureExperiment", ## mirnaMature "matureFrom", ## mirnaMature "matureName", ## mirnaMature "matureSimilarity", ## mirnaMature "matureTo", ## mirnaMature "pmidMedline", ## mirnaPmid "pmidAuthor", ## mirnaPmid "pmidJournal", ## mirnaPmid "pmidTitle", ## mirnaPmid "pmidOrderAdded" ## mirnaPmid )