import(methods)
import(AnnotationDbi)

### Only put what is statically exported here. All the AnnObj instances
### created at load time are dynamically exported (refer to R/zzz.R for
### the details).
export(
    mirbase,
    mirbase_dbconn,
    mirbase_dbfile,
    mirbase_dbschema,
    mirbase_dbInfo
)

exportClasses("mirbaseContextBimap", "mirnaContext", ## CONTEXT
              "mirbaseLinksBimap",   "mirnaLinks",   ## LINKS
              "mirbaseMatureBimap",  "mirnaMature",  ## MATURE
              "mirbasePmidBimap",    "mirnaPmid"     ## PMID
              )

exportMethods("contextNumber",                       ## mirnaContext
              "contextOverlapSense",                 ## mirnaContext
              "contextOverlapType",                  ## mirnaContext
              "contextTranscriptID",                 ## mirnaContext
              "contextTranscriptSource",             ## mirnaContext
              "contextTranscriptName",               ## mirnaContext
              "linksDbId",                           ## mirnaLinks
              "linksDbLink",                         ## mirnaLinks
              "linksDbSecondary",                    ## mirnaLinks
              "matureAccession",                     ## mirnaMature
              "matureEvidence",                      ## mirnaMature
              "matureExperiment",                    ## mirnaMature
              "matureFrom",                          ## mirnaMature
              "matureName",                          ## mirnaMature
              "matureSimilarity",                    ## mirnaMature
              "matureTo",                            ## mirnaMature
              "pmidMedline",                         ## mirnaPmid
              "pmidAuthor",                          ## mirnaPmid
              "pmidJournal",                         ## mirnaPmid
              "pmidTitle",                           ## mirnaPmid
              "pmidOrderAdded"                       ## mirnaPmid
              )