# mirna_hairpin

mirna_id: bmo-mir-2805
hairpin:
c       cuc  ag   -a   -     u    - u 
 uguugga   ua  ucc  ggu cguca ggag g c
 |||||||   ||  |||  ||| ||||| |||| |  
 acaaccu   au  AGG  CCA GCAGU CCUU c g
a       ---  AA   CA   A     -    g a 


mirna_id: bmo-mir-2807a-1
hairpin:
u        ag c           a          cu     -au  u 
 aaaaguua  u aaauuuguaug aguuggaacg  ugccu   gu u
 ||||||||  | ||||||||||| ||||||||||  |||||   || g
 uuuucaau  A UUUAAACAUAC UCGACCUUgu  acggg   cg c
-        gg C           G          -c     gau  c 


mirna_id: bmo-mir-2780a-2
hairpin:
-   cggu  aAA      -       A A   --AUgg      g 
 cca    ga   GGGUGU UAAAUGA G CUU      cuucgg c
 |||    ||   |||||| ||||||| | |||      |||||| a
 ggu    cu   cucgua guuugcu c gga      gaagcu u
a   -aau  --g      a       a a   caaaaa      g 


mirna_id: bmo-mir-2808a-1
hairpin:
-    g    -------    A A    A -  UC      ga 
 agcc ugcu       uCGU G AUCU C CA  GGAUCG  a
 |||| ||||       |||| | |||| | ||  ||||||   
 ucgg guga       agcg c uaga g gu  ccuagc  a
g    -    cucaaag    g c    a a  ca      gc 


mirna_id: bmo-mir-2809
hairpin:
ua  cg     AAA         ---G UC  -  G -Ug  aac g 
  cu  aagcG   CAGCGAACG    A  AC CU A   cg   c g
  ||  |||||   |||||||||    |  || || |   ||   |  
  ga  uuugu   guuguuugu    u  ug ga u   gc   g a
ac  au     -ga         gaaa uu  a  g uaa  gaa a 


mirna_id: bmo-mir-2810
hairpin:
aa    -aga   -      -GA -        AUU  g 
  guaa    gAG AUUUUC   G AACAGCUA   cg c
  ||||    ||| ||||||   | ||||||||   ||  
  cguu    cuc uagaag   c uugucggu   gc u
uc    gcga   g      acg g        ---  g 


mirna_id: bmo-mir-2804-2
hairpin:
uucgggugugucauuacaG              A      a 
                   UAGUGUAUUACAAU CAAAGU u
                   |||||||||||||| ||||||  
                   GUCACAUAAUGUUA GUUUca g
------aguucauuauAUU              C      a 


mirna_id: bmo-mir-2812
hairpin:
c      ccug    aau gag   c             agauuau 
 ccuggc    ucag   c   uua uacagccuggacg       g
 ||||||    ||||   |   ||| |||||||||||||        
 gggccg    agUC   G   GAU AUGUCGGACcugc       g
-      --ug    --G AAA   A             cacgccg 


mirna_id: bmo-mir-2813-1
hairpin:
ccaag c     -     UUA      U   Aaga     c 
     c aaaUU CUAGA   AGCCGU GGA    cguca c
     | ||||| |||||   |||||| |||    |||||  
     g uuuga gauuu   uuggca ccu    gcagu a
uugua u     c     ---      u   -aaa     g 


mirna_id: bmo-mir-2807a-5
hairpin:
aaaa    ag c           g          uuu    a  uu 
    guua  u aaauuuguaug aguuggaaug   gccu ug  u
    ||||  | ||||||||||| ||||||||||   |||| ||  g
    caau  A UUUAAACAUAC UCGACCUUgu   uggg gc  c
uuuc    gg C           G          uac    g  cc 


mirna_id: bmo-mir-2807a-2
hairpin:
aaa     ag c           g          uu     -au  u 
   aguua  u aaauuuguaug aguuggaacg  ugccu   gu u
   |||||  | ||||||||||| ||||||||||  |||||   || g
   ucaau  A UUUAAACAUAC UCGACCUUgu  acggg   cg c
uuc     gg C           G          -c     gau  c 


mirna_id: bmo-mir-2816-1
hairpin:
c    -cug        -   G  AGA      uuauu 
 ucaa    ucCUCGAG UGA GU   GUCGUg     g
 ||||    |||||||| ||| ||   ||||||      
 aguu    aggaguuu acu cg   cagcac     c
u    uaaa        g   a  --a      cacug 


mirna_id: bmo-mir-2817
hairpin:
u  g      AA       G  UA A   A - u 
 uc uuucca  CAAGACU CG  G CCG G c u
 || ||||||  ||||||| ||  | ||| | | u
 ag gaaggu  guucuga gc  c ggu c g a
c  -      -c       -  cg -   c a u 


mirna_id: bmo-mir-2818-1
hairpin:
cga    --c   -AA GG       C     G 
   aucc   gcC   G  AAGAUAU UGUAU a
   ||||   |||   |  ||||||| ||||| u
   uagg   ugg   c  uucugua auaua a
aug    uau   gac uu       a     a 


mirna_id: bmo-mir-2819
hairpin:
auaaa     uga         cuua     ucca   --ac  uu 
     uuggg   ggauugaua    cgggu    uga    gc  a
     |||||   |||||||||    |||||    |||    ||  c
     gaccc   CUUGGCUAU    GUCCG    ACU    cg  u
cgggc     ---         -CUC     --UA   gccu  cu 


mirna_id: bmo-mir-2820-1
hairpin:
cgucaa    -       a   -      --au     au   a  ug 
      gccu auucaug ucc uuuugc    cgugc  cgu ca  g
      |||| ||||||| ||| ||||||    |||||  ||| ||   
      cgga UAAGUGC AGG AGAACG    gcacg  gcg gu  c
aauucg    A       A   U      ACac     --   -  uc 


mirna_id: bmo-mir-2821
hairpin:
a   ua    auauu    c      -  a  agaaaucgauau 
 guc  guag     ccgg gcuuua gu ac            a
 |||  ||||     |||| |||||| || ||             
 cag  cauc     GGCC CGGGAU CA UG            a
-   ua    -cAGU    A      G  C  cguaauuucauu 


mirna_id: bmo-mir-2780a-3
hairpin:
-   cgg   aAA      -       A A   --A            
 cca   uga   GGGUGU UAAAUGA G CUU   Uggcuucgguc 
 |||   |||   |||||| ||||||| | |||   |||||||||| a
 ggu   acu   cucgua guuugcu c gga   auugaagcuau 
a   -aa   --g      a       a a   caa            


mirna_id: bmo-mir-2780b-2
hairpin:
-   cggu  aAA      -       A A   -AAgag      g 
 cca    ga   GGGUGU UAAAUGA G CUU      cuucgg c
 |||    ||   |||||| ||||||| | |||      |||||| a
 ggu    cu   cucgua guuugcu c gga      gaggcu u
a   -aau  --g      a       a a   caaaaa      a 


mirna_id: bmo-mir-2822-1
hairpin:
ggucuua       uuu          a    au 
       ugcaagu   guaaaguguc ccuu  u
       |||||||   |||||||||| ||||   
       acgUUCG   CAUUUUAUAG GGAa  c
guauuaa       CCU          -    gu 


mirna_id: bmo-mir-2814-2
hairpin:
acuugucagcucugcaacaagaaagggca  -       --u         agcuc 
                             cu uugccac   guuuguaga     u
                             || |||||||   |||||||||      
                             GA GAUGGUG   UAAACAUcu     u
-----------------cuagaagucaUG  U       UCU         aaauc 


mirna_id: bmo-mir-2804-3
hairpin:
u       uuucau  c                A      a 
 ucgggug      ua aGUAGUGUAUUACAAU CAAAGU u
 |||||||      || |||||||||||||||| ||||||  
 aguucau      au UUGUCACAUAAUGUUA GUUUca g
-       -----u  A                C      a 


mirna_id: bmo-mir-2816-2
hairpin:
c    -cug        -   G  AGA      uuauu 
 ucaa    ucCUCGAG UGA GU   GUCGUg     g
 ||||    |||||||| ||| ||   ||||||      
 aguu    aggaguuu acu ca   cagcac     c
u    uaaa        g   a  --a      cacug 


mirna_id: bmo-mir-2816-3
hairpin:
cucaacug        -   G  AGA      uuauu 
        ucCUCGAG UGA GU   GUCGUg     g
        |||||||| ||| ||   ||||||      
        aggaguuu acu ca   cagcac     c
auuuuaaa        g   a  --a      cacug 


mirna_id: bmo-mir-2818-2
hairpin:
c  -    --c   -AA GG       C     G 
 ga aucc   gcC   G  AAGAUAU UGUAU a
 || ||||   |||   |  ||||||| ||||| u
 cu uagg   ugg   c  uucugua auaua a
u  g    uau   gac uu       a     a 


mirna_id: bmo-mir-2780b-1
hairpin:
-   cggu  aAA      -       A A   --AAgg      g 
 cca    ga   GGGUGU UAAAUGA G CUU      cuucgg c
 |||    ||   |||||| ||||||| | |||      |||||| a
 ggu    cu   cucgua guuugcu c gga      gaagcu u
a   -aau  --g      a       a a   caaaaa      a 


mirna_id: bmo-mir-2807a-6
hairpin:
agcguaa    a           g          uu     -au  u 
       aacu aaauuuguaug aguuggaacg  ugcuu   gu u
       |||| ||||||||||| ||||||||||  |||||   || g
       uugA UUUAAACAUAC UCGACCUUgu  gcggg   ca c
uuuucaa    C           G          -c     gau  c 


mirna_id: bmo-mir-2824
hairpin:
ca  -    c    --a     c a aaa     ucg  c   gaa    a a 
  cg agag uggu   cugug c g   uugga   uc ugu   gccg g u
  || |||| ||||   ||||| | |   |||||   || |||   |||| |  
  gc ucuc aCCA   GACAC G C   AACUU   Ag gcg   cggu c g
ua  g    -    AUG     C C --A     -CA  u   -ac    a u 


mirna_id: bmo-mir-2825
hairpin:
a     u  -agc      caga   g   aa   -    a  ga  g 
 agugc gg    agcuuu    uug gau  uga ggau cu  ug a
 ||||| ||    ||||||    ||| |||  ||| |||| ||  ||  
 uuaug cc    UCGAAG    AGC CUA  ACu ccug ga  gc g
g     -  guUA      ---A   A   GG   a    -  -a  a 


mirna_id: bmo-mir-2826
hairpin:
---------gaucgcu  aAAA   U    -     G  -AU   ga 
                ga    AGA CGAG GAUCC AU   UGg  c
                ||    ||| |||| ||||| ||   |||   
                cu    ucu gcuc cuagg ug   gcc  c
gcuggggguuagcccg  --cg   -    u     g  auu   gg 


mirna_id: bmo-mir-2827
hairpin:
uuuuauuac   --GA       U   UAC   G  u  ga 
         uCA    CUAUCAG ACG   GCU cg gc  u
         |||    ||||||| |||   ||| || ||   
         agu    ggugguc ugc   cga gc cg  c
------aaa   accc       -   --c   -  -  ac 


mirna_id: bmo-mir-2808b
hairpin:
cuuuu       cua      c   uaa   -   cu   u 
     uuuuugg   ccgaug ugg   ucu cgg  agu a
     |||||||   |||||| |||   ||| |||  |||  
     aaagaCU   GGCUAC AUC   AGA GCu  ucg g
cgcgc       --A      C   -UA   U   --   u 


mirna_id: bmo-mir-2828
hairpin:
--------------uucacaacug   U  GA      AA    Ucc   aa   a 
                        AUA UC  UAUGUG  CGGU   gag  cgu g
                        ||| ||  ||||||  ||||   |||  |||  
                        ugu ag  auacgc  gcua   uuc  gcg u
aucagcuacaagcaccuugugcaa   c  ag      --    uuc   ag   u 


mirna_id: bmo-mir-2807b
hairpin:
u                 c           cguu    g  g 
 uaacucaaauuuguaug aguuggaacag    ccua cg c
 ||||||||||||||||| |||||||||||    |||| || a
 auugaguuuaAACAUAC UCAACUUUGUC    ggau gc a
-                 C           -AAC    -  a 


mirna_id: bmo-mir-2830-1
hairpin:
ga    -         g      gc  c           
  augg aggagugcg ccuggg  ag cgcugaaccc 
  |||| ||||||||| ||||||  || ||||||||| u
  ugcu uucUCGCGC GGACUC  UC GCGAcuuggu 
ug    a         G      UA  A           


mirna_id: bmo-mir-2831-1
hairpin:
g       a                a         u 
 cacagau gucaagcaaaugcuuu uuuguaugu u
 ||||||| |||||||||||||||| ||||||||| c
 gugucua cAGUUUGUUUACGAAA AAACAUaca c
a       c                C         u 


mirna_id: bmo-mir-2775b
hairpin:
aa                     C          aaaa 
  gggagaaaAGUAGGACGUUUC UCCCGCGUGu    u
  ||||||||||||||||||||| ||||||||||     
  cccuuuuuucauccuguagag agggcgcaca    u
cg                     u          aacu 


mirna_id: bmo-mir-2832
hairpin:
-    u    ---      U  -  CG        ---  C  guua     a 
 uuua gaag   gUUGGA AG UG  UUUUGGAU   GU cc    gguua c
 |||| ||||   |||||| || ||  ||||||||   || ||    ||||| u
 aaau cuuc   caacuu uc ac  agagcuug   ca gg    ccagu a
g    -    acu      c  u  ug        acc  u  --aa     g 


mirna_id: bmo-mir-2833-1
hairpin:
aaga      gg    c    g -aa ug   -    u 
    auucgc  uaaa agug a   c  guc cuca a
    ||||||  |||| |||| |   |  ||| |||| u
    uaagug  GUUU UCAU U   G  UAG GAgu g
gaaa      --    U    G AAA GU   A    u 


mirna_id: bmo-mir-2831-2
hairpin:
g   a                              u 
 cac gauggucaagcgaauguuuuguuuguaugu c
 ||| ||||||||||||||||||||||||||||||  
 gug cuaccAGUUUGUUUACGAAACAAACAUaca u
a   g                              u 


mirna_id: bmo-mir-2834-1
hairpin:
uccag      AA      GA  A  C   g 
     uggauU  UAUCGG  CU GA GAC g
     ||||||  ||||||  || || ||| c
     gccuga  guaguc  ga cu cug c
gcaaa      -a      uc  -  u   a 


mirna_id: bmo-mir-2813-2
hairpin:
ccaagcc     -     UUA      U   Aaga     c 
       aaaUU CUAGA   AGCCGU GGA    cguca c
       ||||| |||||   |||||| |||    |||||  
       uuuga gauuu   uuggca ccu    gcagu a
uuguaau     c     ---      u   -aaa     g 


mirna_id: bmo-mir-2835
hairpin:
a    -       ca   ca       -aa     c uc      
 guau ugucucc  uaa  uucauga   guggg a  ccgga 
 |||| |||||||  |||  |||||||   ||||| |  |||| c
 uaug acagAGG  AUU  GAGUAUU   CACUu u  ggucc 
a    g       --   UC       ACA     - uu      


mirna_id: bmo-mir-2836
hairpin:
u     uu      CC   G   --   -  - C   ----    ua 
 gagau  gaCAUC  GCU UAG  ACG AC G gcc    caug  a
 |||||  ||||||  ||| |||  ||| || | |||    ||||   
 cucug  cuguag  ugg auc  ugu ug c cgg    gugu  g
g     --      -u   g   ca   a  u a   uuca    ua 


mirna_id: bmo-mir-2822-2
hairpin:
acg     uau c    uuu          a    au 
   ggucu   g aagu   guaaaguguc ccuu  u
   |||||   | ||||   |||||||||| ||||   
   cuaga   c UUCG   CAUUUUAUAG GGAa  c
aua     --- a    CCU          -    gu 


mirna_id: bmo-mir-2820-2
hairpin:
cgucaa    -       a   -      auc    a  g   aug 
      gccu auucaug ucc uuuugc   gugc uc ugc   g
      |||| ||||||| ||| ||||||   |||| || |||   c
      cgga UAAGUGC AGG AGAACG   Caug ag gcg   c
auuucg    A       A   U      --A    c  g   auu 


mirna_id: bmo-mir-2837
hairpin:
c       auA       C  C         ---u   guuc 
 aaaauga   GAUGGUA UA GUGGGAAUG    ggc    g
 |||||||   ||||||| || |||||||||    |||    c
 uuuuauu   uuauuau au uaccuuuac    ccg    u
u       --a       u  -         uuuu   gucc 


mirna_id: bmo-mir-2807a-3
hairpin:
u        ag c         g g          uu     -au  u 
 aaaaguua  u aaauuugua g aguuggaacg  ugccu   gu a
 ||||||||  | ||||||||| | ||||||||||  |||||   || g
 uuuuuaau  A UUUAAACAU C UCGACCUUgu  gcggg   cg c
-        gg C         A G          -c     gau  c 


mirna_id: bmo-mir-2838
hairpin:
aaau     ---a   U    AA  U      AUAAa   g     gu 
    gauuu    AAU CAGC  AC CACGGG     cuc cuaug  u
    |||||    ||| ||||  || ||||||     ||| |||||   
    cuaaa    uua gucg  ug gugucu     gag gguau  u
gcuu     cuuc   c    -a  -      ----a   -     au 


mirna_id: bmo-mir-2839
hairpin:
----aau               A              a 
       cauaccgUCAAACAG GCGCCAGCGCUAUg g
       ||||||||||||||| |||||||||||||| c
       guaUGGCAGUUUGUC CGCGGUCGCgauau g
ugccauu               A              c 


mirna_id: bmo-mir-2840
hairpin:
a uc     gU     CU  A             u 
 g  uccag  AGGAA  GG AGAAGAGGAGGau u
 |  |||||  |||||  || |||||||||||||  
 c  agguc  uucuu  cc ucuucuccuucug u
g ga     uc     cu  c             g 


mirna_id: bmo-mir-2841
hairpin:
u  g   -u   a  -ua       cg  u   uaggaagg 
 gc gcc  guu ug   uuuuagc  ug uac        a
 || |||  ||| ||   |||||||  || |||         
 ug cgg  cAA AC   AGAAUUG  AC Aug        a
c  g   uc   A  UCG       AU  U   ugugagag 


mirna_id: bmo-mir-2774c
hairpin:
aac   a  auuc   cc   gg     a    aaua 
   aac ac    gga  guc  ucuau gagc    u
   ||| ||    |||  |||  ||||| ||||     
   uug ug    CCU  CAG  AGGUG CUCg    c
cua   c  cUUC   UC   -A     G    ccca 


mirna_id: bmo-mir-2780c
hairpin:
-   cggu  aAA      -       AGACUUAGggcuucgggc 
 cca    ga   GGGCGU UAAAUGA                  a
 |||    ||   |||||| |||||||                  u
 ggu    cu   cucgua guuugcu                  a
a   -aau  --g      a       acaggacaaaaagaaccu 


mirna_id: bmo-mir-2807a-4
hairpin:
u     c  a  c         g g          uu     -au  u 
 aaaag ua cu aaauuugua g aguuggaacg  ugccu   gu u
 ||||| || || ||||||||| | ||||||||||  |||||   || g
 uuuuc au gA UUUAAACAU C UCGACCUUgu  acggg   cg u
-     a  g  C         A G          -c     gau  c 


mirna_id: bmo-mir-2833-2
hairpin:
aaga      gg    c    g -aa ug   -    u 
    auucgc  uaaa agug a   c  guc cuca a
    ||||||  |||| |||| |   |  ||| |||| u
    uaagug  GUUU UCAU U   G  UAG GAgu g
uaaa      --    U    G AAA GU   A    u 


mirna_id: bmo-mir-2842
hairpin:
-     -uuucuU    -A   U  UA   G     Cc 
 ucgac       GAAG  UCC CG  CUG UGGCG  a
 |||||       ||||  ||| ||  ||| |||||   
 agcug       cuuc  agg gu  ggc gcugc  u
g     cugucuu    cg   u  ga   -     cc 


mirna_id: bmo-mir-2806-2
hairpin:
aac          u   -      g           g 
   uuuauucuau gca ugucgg uuagagaagcu u
   |||||||||| ||| |||||| ||||||||||| g
   aaauaagGUA CGU AUAGCC AAUCUCUUCga c
gau          -   C      -           a 


mirna_id: bmo-mir-2843-1
hairpin:
-    uug  gUCUA G   AU   -    G U      ga 
 ggcu   ga     A GAA  UAG GUCG A ACAuac  a
 ||||   ||     | |||  ||| |||| | ||||||   
 ccgA   CU     U CUU  GUC CAGC U Ugugug  u
u    --A  ---AG G   CU   G    G U      au 


mirna_id: bmo-mir-2814-3
hairpin:
a                      --u         agcuc 
 gaucuucaguaccuacuaccac   guuuguaga     u
 ||||||||||||||||||||||   |||||||||      
 cuagaagucaUGGAUGAUGGUG   UAAACAUcu     u
-                      UCU         aaauc 


mirna_id: bmo-mir-2834-2
hairpin:
uccag      AA      GA  A  C   g 
     cggauU  UAUCGG  CU GA GAC g
     ||||||  ||||||  || || ||| c
     gccuga  guaguc  ga cu cug c
gcaaa      -a      uc  -  u   a 


mirna_id: bmo-mir-2830-2
hairpin:
ga    -         g      gc  c           
  augg aggagugcg ccuggg  ag cgcugaaccc 
  |||| ||||||||| ||||||  || ||||||||| u
  ugcc uucUCGCGC GGACUC  UC GCGAcuuggu 
ug    a         G      UA  A           


mirna_id: bmo-mir-2780d
hairpin:
a   cggu  AA  GUG        A A   --AGgg      g 
 cca    ga  AG   UUAAAUGA G CUU      cuucga c
 |||    ||  ||   |||||||| | |||      |||||| a
 ggu    cu  uc   aguuugcu c gga      gaagcu u
a   -aau  gc  gua        a a   caaaaa      a 


mirna_id: bmo-mir-2804-4
hairpin:
u      uuuucau  c                A      a 
 ucgggu       ua aGUAGUGUAUUACAAU CAAAGU u
 ||||||       || |||||||||||||||| ||||||  
 aguuca       au UUGUCACAUAAUGUUA GUUUca g
-      -----uu  A                C      a 


mirna_id: bmo-mir-2843-2
hairpin:
ggc     -  UC     AAA      CG   ACA      -u   -    u 
   uuugg ag  UAAGG   UUAGGU  GAU   uacgaa  uag ugcg a
   ||||| ||  |||||   ||||||  |||   ||||||  ||| ||||  
   aggcu uc  AUUCC   AGUCCG  CUA   GUGCUU  guc gugc u
-aa     a  UA     -CC      AA   ---      cu   u    g 


mirna_id: bmo-mir-2845
hairpin:
u     g ag  au -    uu    -     a    cccac 
 gccaa a  ua  c cggc  cugg gaugg ucgu     u
 ||||| |  ||  | ||||  |||| ||||| ||||     c
 ugguu u  AU  G GUCG  GACC UUGCC agua     u
u     g ga  GC U    UC    G     -    caaca 


mirna_id: bmo-mir-2846
hairpin:
aauaua    -      A  AA G   UA      acg   gaa   a 
      ucgu GGGAUU CU  U GCG  GUGCGa   cgu   ccg g
      |||| |||||| ||  | |||  ||||||   |||   ||| a
      ggcg cccuga ga  a cgu  uaugcu   gca   ggu c
gacaga    g      a  -- g   gg      -ga   -aa   g 


mirna_id: bmo-mir-2847
hairpin:
a      -------u  -   c   uu g      uc   ug g 
 cccagc        uc cau ggc  g auaaua  cug  c u
 ||||||        || ||| |||  | ||||||  |||  | a
 gggucg        GG GUG CUG  U UGUUAU  gau  g g
-      uauaAUAU  C   A   UU G      uu   gu a 


mirna_id: bmo-mir-2849-1
hairpin:
gugga     -A      ---  A      AC  A      --a      a 
     cguuu  ACUUUA   CG UUAUGG  UC Guucca   aagaua c
     |||||  ||||||   || ||||||  || ||||||   |||||| u
     guaaa  uggagu   gc ggugcc  ag cagggu   uuuugu g
guaaa     gg      ugg  -      aa  -      gua      g 


mirna_id: bmo-mir-2848
hairpin:
ugccgcuaccaaccuugagauaugaguaaauggc    c  ccc   aaa   -   c   u 
                                  ugcc ua   uuc   ccg gaa gca u
                                  |||| ||   |||   ||| ||| |||  
                                  ACGG AU   AAG   GGC CUU cgu a
----------------------caugguggugAA    -  --A   -AC   G   -   c 


mirna_id: bmo-mir-2849-2
hairpin:
gugga     -A      ---  A      AC  A      --a      g 
     cguuu  ACUUUA   CG UUAUGG  UC Guucca   aagaua c
     |||||  ||||||   || ||||||  || ||||||   |||||| u
     guaaa  uggagu   gc ggugcc  ag cagggu   uucugu g
guaaa     gg      ugg  -      aa  -      gua      g 


mirna_id: bmo-mir-2849-3
hairpin:
gugga     -A      ---  A      AC  A      --a      a 
     cguuu  ACUUUA   CG UUAUGG  UC Guucca   aagaua c
     |||||  ||||||   || ||||||  || ||||||   |||||| u
     guaaa  uggagu   gc gguacc  ag cagggu   uuuugu g
guaaa     gg      ugg  -      aa  -      gua      a 


mirna_id: hvt-mir-H1
hairpin:
cuu   -  -a   uu      g     ccg   gcg 
   cgg gc  ccg  caucuc gcgcg   agc   c
   ||| ||  |||  |||||| |||||   |||    
   gCC CG  GGC  GUAGGG CGCGc   ucg   g
---   G  CG   -U      A     uag   auc 


mirna_id: hvt-mir-H2
hairpin:
--gc      uc    - g   -      ----ga  gg 
    ggccga  agcg c cgg cgggcc      cc  c
    ||||||  |||| | ||| ||||||      ||  u
    UUGGCU  UUGC G GCU GCCCgg      gg  c
ucuU      --    A -   U      gcaaua  ag 


mirna_id: hvt-mir-H3
hairpin:
cug    AU GA  G  GG    C        --g  c 
   CGUC  G  UC CG  GGGA Gccgccgc   ga c
   ||||  |  || ||  |||| ||||||||   ||  
   GCGG  C  AG GC  CCCu uggcggug   cu g
cug    CU GG  -  AG    -        uaa  g 


mirna_id: hvt-mir-H4
hairpin:
--------     A  U   A   G  G  auau     ga 
        GGCGG GG GUG UAU GU Ug    ggugu  u
        ||||| || ||| ||| || ||    |||||  a
        CUGCC CC CAC GUG CG Gc    ccgua  u
caAUGAGG     G  -   G   G  G  guau     ag 


mirna_id: hvt-mir-H5
hairpin:
ccGCUGGU     -       C   ---      a u      
        GCCGA CGAUCGC GGG   Accggc c uucgc 
        ||||| ||||||| |||   |||||| | |||| g
        UGGCU GCUAGCG CUC   UGGucg g aggcg 
----guag     U       U   CAA      a c      


mirna_id: hvt-mir-H7
hairpin:
    a  aUUU      A    UG  CG    Au  u 
gccu uc    UUCCUA AGCG  CC  GGUU  gc u
|||| ||    |||||| ||||  ||  ||||  ||  
cgga AG    AAGGAU UUGC  GG  CCAa  ug u
    A  GAUU      G    CU  --    ac  a 


mirna_id: hvt-mir-H8
hairpin:
-  -  a      U  C    GG       G G   guau 
 gg gc uggAUC CU GCGG  UGCGUAG C Ugu    u
 || || |||||| || ||||  ||||||| | |||     
 cc ug gcuuag ga cgcc  auguauc g aca    c
c  a  a      -  -    ua       - -   auua 


mirna_id: hvt-mir-H9
hairpin:
  a   UU          CC  G      GUcua 
gc uac  UCUCAUGGAC  CC AGUUGU     u
|| |||  ||||||||||  || ||||||      
cg AUG  GGAGUACCUG  GG UCGACa     u
  g   CU          CC  A      auugc 


mirna_id: iltv-mir-I1
hairpin:
cgcaga      U  UU        --     g ag 
      ggAGAC GA  GGGGAAUG  AUUGG a  c
      |||||| ||  ||||||||  ||||| |   
      CCUCUG CU  CUCCUUAC  UAAcc u  u
--gcca      U  UU        CU     g gu 


mirna_id: iltv-mir-I2
hairpin:
cc     A     -    A       C  -gu  ac 
  gcGGA GGCUG UGCG UAGGAGC GA   ac  u
  ||||| ||||| |||| ||||||| ||   ||   
  cgccu ccgau acgc auccucg cu   ug  u
ac     -     g    -       c  auu  aa 


mirna_id: iltv-mir-I3
hairpin:
-  gc   cu      -      c   uuacu  gu 
 cu  ccg  cccgcc ggagac gag     gc  u
 ||  |||  |||||| |||||| |||     ||  u
 ga  GGC  GGGUGG UCUCUG UUC     cg  a
u  gA   UU      G      -   --Uau  ag 


mirna_id: iltv-mir-I4
hairpin:
gu   g               AUGA     -   u 
  cgu uAUGUAUAGCGAGCA    CCGUG Ugg u
  ||| |||||||||||||||    ||||| ||| c
  gua auacguauugcucgu    ggcac acu c
cc   g               --ga     u   c 


mirna_id: iltv-mir-I5
hairpin:
--    u         CC              gag 
  ucgu CUUCUCGUC  CGUCUUCUUCAGAu   c
  |||| |||||||||  ||||||||||||||    
  agUA GAGGAGCAG  GCAGAAGAAGUcug   u
gg    C         CA              agg 


mirna_id: iltv-mir-I6
hairpin:
---  u       C  UA      UC U     uc  u 
   uc cuGUCUC UG  CCCUCA  G CGuug  gg c
   || ||||||| ||  ||||||  | |||||  ||  
   ag GACAGAG AC  GGGAGU  C GCAac  cc u
cug  U       U  CG      -- -     --  u 


mirna_id: mdv2-mir-M32
hairpin:
   c      A  C    A   GCG      u 
cug gAUUCC UC UUCG CUA   ACUugu a
||| |||||| || |||| |||   ||||||  
ggc CUGAGG AG AGGC GAU   Ugggcg u
   U      C  C    C   -AA      g 


mirna_id: hsa-mir-711
hairpin:
-------a  g    uga         ca    g  g   gc 
        cu acuu   gucucuccu  gggu cu cag  a
        || ||||   |||||||||  |||| || |||   
        ga uGAA   CAGAGAGGG  CCCA GG guc  a
guagaggg  g    -UG         -A    -  G   ga 


mirna_id: hsa-mir-718
hairpin:
g   g  -   -   aa a   c      ccc      
 gcc cg gcg cgc  g ugg ggcggg   gggca 
 ||| || ||| |||  | ||| ||||||   |||| c
 cgg gc cGC GCG  C GCC CCGCCU   cccgc 
-   a  a   U   GG C   -      -UC      


mirna_id: mdo-mir-26-2
hairpin:
-----   uU         CC           uuu 
     ccg  UCAAGUAAU  AGGAUAGGCug   u
     |||  |||||||||  |||||||||||   c
     ggc  gguucauua  ucuuguccgac   u
ccggg   uu         cc           uuc 


mirna_id: mdo-mir-26-3
hairpin:
a  u   U      A  C            accc 
 cc ggU CAAGUA UC AGGAUAGGCugg    a
 || ||| |||||| || ||||||||||||    u
 gg uca guucau ag ucuuauccggcu    u
-  c   c      c  c            acuc 


mirna_id: mdo-mir-26-1
hairpin:
------------UU         C          -  guc 
              CAAGUAAUC AGGAUAGGCu gu   c
              ||||||||| |||||||||| ||    
              guucguuag uccuauccgg cg   a
cgguggaggucuuu         u          g  ucg 


mirna_id: mdo-mir-148
hairpin:
              ---g a    ca    -   au 
gaggcaaaguucug    g cacu  gacu cug  u
||||||||||||||    | ||||  |||| |||  a
cucUGUUUCAAGAC    C GUGA  CUga gau  g
              AUCA -    --    a   ag 


mirna_id: mdo-mir-153-2
hairpin:
a      g      -             gu       -a  aa 
 gcgguu ccggug ucauuuuugugau  ugcagcu  gu  u
 |||||| |||||| |||||||||||||  |||||||  ||  a
 ugucaa gguuaC AGUGAAAACACUG  ACGUUga  cg  u
g      a      U             AU       cc  ag 


mirna_id: mdo-mir-190a
hairpin:
u     c u    - UG               UA     uuau 
 gcagg c cugu g  AUAUGUUUGAUAUAU  GGUug    u
 ||||| | |||| |  |||||||||||||||  |||||     
 cgucc g gaca c  uauacaaacuauaua  ucaac    u
c     u u    u cu               --     cuaa 


mirna_id: mdo-mir-429
hairpin:
-   ug   u -          aa       cucgc 
 gau  gug c uuaccagaca  guuagau     u
 |||  ||| | ||||||||||  |||||||      
 cug  uaC G AAUGGUCUGU  UAAUcug     a
a   gu   C U          CA       ucuuu 


mirna_id: mdo-mir-106
hairpin:
-- ug   -AA            U    G   guc 
  u  ugu   AAGUGCUUAUAG GCAG UAG   g
  |  |||   |||||||||||| |||| |||   u
  a  aca   uucacgaguguc cguc auc   g
cc gu   acc            c    -   aau 


mirna_id: mdo-mir-126
hairpin:
---g   -           U       C cug   c 
    ggu CAUUAUUACUU UGGUACG G   uga a
    ||| ||||||||||| ||||||| |   |||  
    ccg guaauaaugag gccaugc c   acu c
guua   c           u       u -aa   a 


mirna_id: mdo-mir-139
hairpin:
-   -      -   U  A            g ga 
 ugu auUCUA CAG GC UGUGUCUccagu u  c
 ||| |||||| ||| || |||||||||||| |  u
 aca uaaggu guc cg acauagagguca g  a
a   a      u   c  -            g ga 


mirna_id: mdo-mir-140
hairpin:
    -  A             A       uu   uc 
ccug cC GUGGUUUUACCCU UGGUAGg  acg  a
|||| || ||||||||||||| |||||||  |||   
ggac gg caccaagauggga accaucu  ugu  u
    a  -             c       --   cg 


mirna_id: mdo-mir-146a
hairpin:
---------u    c       uU         A  C        gucuu 
          guau uucagcu  GAGAACUGA UU CAUGGGUU     u
          |||| |||||||  ||||||||| || ||||||||      
          uaua aggucga  uucuugacu aa guauccag     g
cuacugucuc    -       -c         c  a        acuau 


mirna_id: mdo-mir-146b
hairpin:
cugg    G        A    A    CU  ga  u 
    cucU AGAACUGA UUCC UAGG  gu  gc c
    |||| |||||||| |||| ||||  ||  ||  
    gagg ucuugacu aagg aucc  ua  cg a
----    -        g    -    cg  aa  u 


mirna_id: mdo-mir-150
hairpin:
UC    A  -      --A   G     --   aga 
  UCCC AC CCUUGU   CCA AGUcc  auc   g
  |||| || ||||||   ||| |||||  |||    
  gggg ug ggggca   ggu ucggg  ugg   a
uc    c  a      ggg   g     ca   ccc 


mirna_id: mdo-mir-153-1
hairpin:
c     g         -             -c       --   au 
 ucaca cugccagug ucauuuuugugau  ugcagcu  agu  u
 ||||| ||||||||| |||||||||||||  |||||||  |||   
 ggugu gacgguuaC AGUGAAAACACUG  ACGUUga  ucg  c
c     g         U             AU       cu   gu 


mirna_id: mdo-mir-205a
hairpin:
-------     C           C        ucuca 
       cuugU CUUCAUUCCAC GGAGUCUG     u
       ||||| ||||||||||| ||||||||     a
       gaaua gaagugaggug cuuuagac     u
guacgga     c           a        uaauc 


mirna_id: mdo-mir-210
hairpin:
-    cc   g  g    a   acua       u  c - u 
 ccgg  gca gg agcc cug    acgcaca ug g c c
 ||||  ||| || |||| |||    ||||||| || | |  
 ggcc  cgu cc UCGG GAC    UGCGUGU Ac c g a
c    aa   g  a    C   AGUG       C  c a g 


mirna_id: mdo-mir-215
hairpin:
-   a aaau  ug      aa A  A     -   U         uuauau 
 gua g    gg  uguagg  a UG CCUAU GAA UGACAGACA      u
 ||| |    ||  ||||||  | || ||||| ||| |||||||||       
 cgu c    cu  auguuc  u ac ggaug cuu acugucugu      u
u   - gugu  gu      cg a  c     u   u         uugaaa 


mirna_id: mdo-mir-455
hairpin:
-u  c   c ug  g          U      A   C   gaa 
  cc ugg g  ag gUAUGUGCCC UGGACU CAU Gug   g
  || ||| |  || |||||||||| |||||| ||| |||    
  gg acu c  uc cauauacggg accuga gua cac   c
uu  a   c gu  a          u      c   c   aac 


mirna_id: mdo-mir-499
hairpin:
gggc   c      UA       CA          auucu 
    ggg agcugU  AGACUUG  GUGAUGUUUa     u
    ||| ||||||  |||||||  ||||||||||     c
    ccc uugaca  ucugaac  cacuacaagu     u
----   u      ua       aa          guauc 


mirna_id: mdo-mir-33
hairpin:
--------          A UU          u g g 
        gGUGCAUUGU G  GCAUUGCAcg c u u
        |||||||||| |  |||||||||| | |  
        cuacgugaca c  uguaacgugc g g c
cggagacc          c uu          c g c 


mirna_id: mdo-mir-363
hairpin:
-      u  -gu         CA  A     A    gauaaguu 
 uuuugc gu   CGGGUGGAU  CG UGCAA UUuu        u
 |||||| ||   |||||||||  || ||||| ||||         
 agaacg ca   gucuaccua  gc acguu aaaa        a
c      c  aau         ug  -     a    agaggaua 


mirna_id: mdo-mir-190b
hairpin:
--  u     -U               G     -   ga 
  cu cugug  GAUAUGUUUGAUAUU GGUUg uuu  u
  || |||||  ||||||||||||||| ||||| |||   
  gg gacau  uuauacaaacuguaa ucaac aag  u
uu  c     uc               a     u   gg 


mirna_id: mdo-mir-147b
hairpin:
u   u    c   ug   a  uc       aaacuagacu    a 
 cua gaau uag  gaa ca  uccgcac          acug a
 ||| |||| |||  ||| ||  |||||||          ||||  
 gau uuua AUC  CUU GU  AGGCGUG          UGac a
g   u    c   GU   C  GA       ----------    c 


mirna_id: mdo-mir-460
hairpin:
c       -    aaC UG       CA A        uuuc 
 ugacuuu auag   C  CAUUGUA  C CUGUGUGu    a
 ||||||| ||||   |  |||||||  | ||||||||     
 acugaga uauc   g  guaacau  g gacacgua    u
c       a    aua gu       ac c        cccu 


mirna_id: mdo-mir-28
hairpin:
-   ----g  -     ---    -   aug  ag   a     aaa 
 ggu     cu uccgu   gcug ggg   cc  gag ggcaa   u
 |||     || |||||   |||| |||   ||  ||| |||||   g
 ccg     ga agGUA   UGAC CUC   GG  cuc ccguu   g
a   uacaa  g     AGC    A   -GA  AA   -     ccu 


mirna_id: mdo-mir-195
hairpin:
cc    cuuU        -AAA          ccugag  a 
  cugg    AGCAGCAC    AAUAUUGGCA      gg a
  ||||    ||||||||    ||||||||||      ||  
  gauc    ucgucgug    uuaugaccgu      cc a
--    ----        agag          -----a  g 


mirna_id: mdo-mir-151
hairpin:
u  ug       aca        U     ---C    A 
 ac  ucucccu   uUAGACUG GAGCU    CUUG G
 ||  |||||||   |||||||| |||||    ||||  
 ug  ggggggg   gguuuggu uucgg    ggac G
-  gu       --g        u     ucaa    g 


mirna_id: mdo-mir-497
hairpin:
cc    uc   c C    G    C         Uu agu  u 
  ugcc  cgc c AGCA CACA UGUGGUUUG  c   gu a
  ||||  ||| | |||| |||| |||||||||  |   ||  
  augg  gcg g uugu gugu acaccaaac  g   cg u
--    ga   a a    g    c         cu aac  g 


mirna_id: mdo-mir-551a
hairpin:
---------u      g      c    g    gga     uu   c 
          gacccu gaaauc agaa gggu   gccug  gga a
          |||||| |||||| |||| ||||   |||||  |||  
          uugggA CUUUGG UCUU CCCA   CGgau  cuu g
aaagguaccg      A      U    A    --G     --   u 


mirna_id: mdo-mir-551b
hairpin:
--    a         g      ga a   -cgu  g 
  cccc gaaaucaag augggu  g ccu    gu c
  |||| ||||||||| ||||||  | |||    ||  
  gggG CUUUGGUUC UACCCA  C Gga    ca a
uc    A         A      -G -   aagu  a 


mirna_id: mdo-mir-599
hairpin:
cu      a    --         u       gg     a  uu 
  guccag gugu  guuugauaa cugacau  gacag gg  c
  |||||| ||||  ||||||||| |||||||  ||||| ||   
  uagguc caua  CAAACUAUU GACUGUG  UUGuc cu  u
--      -    cc         U       --     a  uu 


mirna_id: mdo-mir-875
hairpin:
  u    u  aAU        C  A       uuaa 
uc gugg ac   ACCUCAGU UU UCAGGUG    u
|| |||| ||   |||||||| || |||||||    u
ag cacu ug   uggagucg aa gguccac    a
  u    u  cgu        u  a       uaaa 


mirna_id: mdo-mir-885
hairpin:
         - ---a g  a      --   ug -      aag u 
gauuuuggg c    a uc guucac  cac  u cugccu   c u
||||||||| |    | || ||||||  |||  | ||||||   | c
cugaggcuc g    u ag UAGGUG  GUG  G GACGGA   g c
         a gucg g  A      AU   GU C      -ga u 


mirna_id: mdo-mir-761
hairpin:
caag                       G GA  g 
    aggaggaGCAGCAGGGUGAAACU A  CA u
    ||||||||||||||||||||||| |  ||  
    uccuccucgucguuucacuuuga u  gu u
auag                       g -g  c 


mirna_id: mdo-mir-759
hairpin:
ggauua             acc     u   AG         C    U  Cu 
      uaauaaauuaaau   uaaac gGC  AGUGCAAAC AUUU GA  u
      |||||||||||||   ||||| |||  ||||||||| |||| ||   
      guuguuuaauuua   auuug ucg  uuacguuug uaaa cu  a
-----g             caa     -   -g         -    u  ag 


mirna_id: mmu-mir-432
hairpin:
ug   a    -   --cau    ---u     -  -    c 
  ggu gcuc uug     uucc    ggugg gg gcca u
  ||| |||| |||     ||||    ||||| || |||| g
  ucG CGGG GAC     GAGG    ucacc cc cggu g
--   A    U   UAGAU    UUCU     u  u    a 


mirna_id: mmu-mir-599
hairpin:
ugcu     -ca   ua         a        ----      a 
    gucca   gug  uuugauaag ugacauag    gagagg a
    |||||   |||  ||||||||| ||||||||    ||||||  
    uaggu   uac  AAACUAUUU ACUGUGUU    cuuucu c
-cag     cca   cC         G        ucca      u 


mirna_id: mmu-mir-767
hairpin:
-----   auccauau        ac   U C       UU  C      c    c 
     aga        agguuuuu  uca G ACCAUGG  GU UGAGCA auaa a
     |||        ||||||||  ||| | |||||||  || |||||| |||| u
     ucu        ucuaagga  agu c ugguauc  ca acucgu uguu g
cguca   --gucaau        ga   c u       -c  u      c    c 


mirna_id: mmu-mir-664
hairpin:
----------CU         AAA   C         aa 
            GGCUGGGGA   UGA UGGauagaa  c
            |||||||||   ||| |||||||||  a
            CCGACCCCU   AUU ACUUAUcuu  u
gaaaguacacAU         --C   U         au 


mirna_id: mml-mir-129-2
hairpin:
cu             -       C   CU      ---     acau 
  gcccuucgugaau CUUUUUG GGU  GGGCUU   GCugu    a
  ||||||||||||| ||||||| |||  ||||||   |||||     
  cgggaggcgcuua gaaaaac cca  cccgaa   cgaua    a
cg             c       c   uu      ggc     acuc 


mirna_id: mml-mir-526b
hairpin:
           c     U                -G    c 
ucaggcuguga cCUCU GAGGGAAGCACUUUCU  Uugu u
||||||||||| ||||| ||||||||||||||||  ||||  
agucuggcauu ggaga uuuccuucgugaaaga  aaua g
           c     u                aa    a 


mirna_id: mml-mir-524
hairpin:
--   u        c  A      C          ---    gu 
  uca gcugugac CU CAAAGG AAGCACUUUC   UCuu  c
  ||| |||||||| || |||||| ||||||||||   ||||   
  agu uggcauug ga guuucc uucguggaag   agaa  u
ag   u        u  c      c          aaa    aa 


mirna_id: mml-mir-516b
hairpin:
       cu      A        UAA            g    g 
ucucagg  gugacc UCUGGAGG   GAAGCACUUUcu uuuu u
|||||||  |||||| ||||||||   |||||||||||| |||| g
agaguuu  cauugg agacuuuc   cuucgugaaaga aaga a
       cu      g        ---            a    a 


mirna_id: mml-mir-571
hairpin:
    cu  uucauaa  -     uaa       c     -  a    uuu u  u u 
ggaa  gc       uc cucag   ggccaac uccau gc ccau   c ug c g
||||  ||       || |||||   ||||||| ||||| || ||||   | || |  
cuuu  cg       AG GGGUC   CCGGUUG AGgug cg ggug   g ac g u
    uu  -uccggG  U     -CA       -     u  -    ucu u  c a 


mirna_id: mml-mir-595
hairpin:
-   g  u  guuua      --       -    auag   u 
 ccu ca gc     acacca  gcacacu cagu    ucu g
 ||| || ||     ||||||  ||||||| ||||    ||| u
 gga gU UG     UGUGGU  CGUGUGA Gucg    agg a
a   g  C  -----      GU       A    gacg   a 


mirna_id: mml-mir-603
hairpin:
gauugaugc      u    ucc           ug   cu       ua 
         uguugg uugg   aaaaguaauug  gug  ugccguu  u
         |||||| ||||   |||||||||||  |||  |||||||  a
         auaauu aauc   UUUUCAUUAAC  CAC  ACgguaa  a
---------      c    uCU           GU   AC       ug 


mirna_id: mml-mir-622
hairpin:
----ag  g    ggacaagua  gg             --a  a  g   c 
      ag agcu         cu  ucucagcagacug   gg ga cac g
      || ||||         ||  |||||||||||||   || || |||  
      uc uCGA         GG  GGAGUCGUCUGAC   cc cu gug c
guagag  g    ---------  UU             Aca  a  g   a 


mirna_id: mml-mir-892b
hairpin:
--u  aa   c             u    u u     g 
   gc  ugc cuacucagaaagg gcca u augua a
   ||  ||| ||||||||||||| |||| | ||||| u
   cg  aug GAUGGGUCUUUCC CGGU A uguau u
acu  ga   A             U    C C     a 


mirna_id: mml-mir-541
hairpin:
-   -u     AAA        C    G UC    U   aagug 
 acg  caggg   GGAUUCUG UGUC G  CCAC cca     c
 |||  |||||   |||||||| |||| |  |||| |||      
 ugu  gucuc   ccuaagac acgg u  ggug ggu     a
g   uc     agg        -    g --    -   aagau 


mirna_id: mml-mir-708
hairpin:
-aa        A           A     C  GGg  aa   ac 
   cugcccuc AGGAGCUUACA UCUAG UG   gu  aug  u
   |||||||| ||||||||||| ||||| ||   ||  |||  u
   gacgggag ucuucgagugu agauc ac   ca  uac  g
agg        a           c     a  --a  ag   ac 


mirna_id: mml-mir-543
hairpin:
      u  u       u  -     ucuu     - uuu 
gguacu aa gagaagu gc ccgug    uuucg c   a
|||||| || ||||||| || |||||    ||||| |   u
cuauga uu UUCUUCA CG GGCGC    AAAgc g   u
      c  u       -  U     UUAC     a ugu 


mirna_id: mml-mir-1233
hairpin:
guga        c      aggg    ggga    ca      uc 
    gugggagg cagggc    cagg    gcug  gggccu  g
    |||||||| ||||||    ||||    ||||  ||||||   
    CGCCCUCC GUCCCG    GUcu    cgac  cccggg  g
--GA        U      ---A    ---g    --      ga 


mirna_id: mml-mir-1234
hairpin:
-------------         ---g    ga     u   c 
             ugggguggg    cagg  uggcu ggg c
             |||||||||    ||||  ||||| |||  
             ACCCCACCC    GUCC  GCUga ccc u
aggacccacggaC         ACCA    -G     -   g 


mirna_id: mml-mir-762-1
hairpin:
gccc     c  g  u      gua      g        
    ggcuc gg uc cggccc   cggucc gccggcc 
    ||||| || || ||||||   |||||| |||||| a
    cCGAG CC AG GCCGGG   GUCGGG cggucgu 
---c     -  G  -      ---      G        


mirna_id: mml-mir-670
hairpin:
---  u  -ac      UC        U     - UG    ug au 
   gg gg   cugaug  CCUGAGUG AUGUG G  AAcc  a  u
   || ||   ||||||  |||||||| ||||| |  ||||  |  u
   cc cc   gacugu  ggacuuac uauac c  uugg  u  g
cuu  -  guu      ga        u     u cu    gu cc 


mirna_id: mml-mir-764
hairpin:
-----------    ua  a     G   U    -  U        -aug   g 
           aauc  gg ggcaG UGC CACU UG CCUCCUcc    guu g
           ||||  || ||||| ||| |||| || ||||||||    |||  
           uuag  cc cuguc acg guga ac ggaggggg    uaa a
gguugcuuuaa    ua  a     a   -    u  c        gaca   a 


mirna_id: mml-mir-759
hairpin:
ggauuau             cc     u   AG          A   U  Cu 
       aauaaauuaaaug  uaaac gGC  AGUGCAAACA UUU GA  c
       |||||||||||||  ||||| |||  |||||||||| ||| ||   
       uuguuuaauuuac  auuug ucg  ucacguuugu aaa cu  a
-------             aa     -   -g          -   u  ag 


mirna_id: oan-mir-29b-2
hairpin:
         -          c      g  u    uuuucc 
cuucuggaa gcugguuuca auggug cu agau      a
||||||||| |||||||||| |||||| || ||||       
gaggauuuU UGACUAAAGU UACCAC GA Ucua      u
         G          U      -  -    ugucuc 


mirna_id: oan-mir-92c
hairpin:
u   au       g    c    ga       uuu 
 ucu  gcagguu ggau agug  aaugcug   g
 |||  ||||||| |||| ||||  |||||||    
 aga  UGUCCGA CCUG UCAC  UUAUggu   c
u   gu       A    U    -G       uuc 


mirna_id: oan-mir-92d
hairpin:
cuu  uau            c   u        uu  uu 
   uc   gcagguugggau agu gcaaugcu  gu  g
   ||   |||||||||||| ||| ||||||||  ||   
   ag   UGUCCGGCCUUG UCG CGUUAUga  ca  u
--g  --u            U   -        --  uc 


mirna_id: oan-mir-9-2
hairpin:
guug   UC               G      ug a 
    uua  UUUGGUUAUCUAGCU UAUGag  u u
    |||  ||||||||||||||| ||||||  |  
    aau  aagccaauagaucga auacuu  g u
----   ga               a      cu g 


mirna_id: oan-mir-182
hairpin:
-----------     cu      U       U -G      UCA      ugaggu 
           cccuc  gcugug UUGGCAA G  UAGAAC   CAcugg      a
           |||||  |||||| ||||||| |  ||||||   ||||||       
           gggag  cgguau aaccguu c  aucuug   guggcc      a
acggccgacuc     cc      c       - ag      ---      uagggu 


mirna_id: oan-mir-218-2
hairpin:
gg        uUU         CU        gg  gaaca 
  ggcuuucc   GUGCUUGAU  AACCAUGU  ug     a
  ||||||||   |||||||||  ||||||||  ||      
  ucggaagg   cacgaacug  uugguaca  ac     u
--        cac         uc        ag  aaaua 


mirna_id: ptr-mir-500-2
hairpin:
u      cu -U         UAC       AG g   uuu 
 cccccu  c  AAUCCUUGC   CUGGGUG  A ugc   c
 ||||||  |  |||||||||   |||||||  | |||   u
 ggggga  g  uuaggaacg   gacccac  u acg   g
-      ac uc         ---       -g g   uaa 


mirna_id: ptr-mir-892b
hairpin:
  ag   c             UGC    C  uuag 
gc  ugc cUAUUCAGAAAGG   CAGU AC    a
||  ||| |||||||||||||   |||| ||    u
cg  aug ggugagucuuucc   guca ug    u
  ga   a             uuu    c  uaca 


mirna_id: ptr-mir-664b
hairpin:
a    aaaa      aa     au  u         ag 
 cauu    ugggcu  gggag  ga uggguagaa  u
 ||||    ||||||  |||||  || |||||||||  a
 guaa    AUCCGG  CCCUC  UU ACUUAUcuu  u
-    aaac      --     CG  U         au 


mirna_id: ptr-mir-299
hairpin:
------     a                      uu 
      aagaa UGGUUUACCGUCCCACAUACAU  u
      ||||| ||||||||||||||||||||||  g
      uucuu gccaaauggcaggguguaugua  a
cuaugg     c                      ua 


mirna_id: ptr-mir-373
hairpin:
         -     G            uuuuug 
gggauACUC AAAAU GGGGCGCUUUCC      u
||||||||| ||||| ||||||||||||       
cccuguggg uuuua ccucgugaaggg      c
         g     g            ucaugc 


mirna_id: ptr-mir-497
hairpin:
-------cC    G    C         U  --   ac 
         AGCA CACA UGUGGUUUG Ac  ggc  u
         |||| |||| ||||||||| ||  |||   
         uugu gugu acaccaaac ug  ccg  g
ggagcgaga    g    c         c  ca   gu 


mirna_id: ptr-mir-570
hairpin:
uuauu      a         a     c        c  cac 
     agguug ugcaaaggu auugc guuuuugc au   u
     |||||| ||||||||| ||||| |||||||| ||    
     uccaac aCGUUUCCA UAACG CAAAAGCg ua   u
-----      c         A     U        a  acu 


mirna_id: ptr-mir-571
hairpin:
ccuc    a a  -aa      -  u    u   -cuu        cc 
    agua g cc   gcucag ug gcca uuc    gucuguag  a
    |||| | ||   |||||| || |||| |||    ||||||||   
    ucgu c gg   CGAGUC AC CGGU GAG    cggguauc  u
-uau    c -  GAG      U  -    U   Uucu        ug 


mirna_id: ptr-mir-589
hairpin:
ucca   ugu  cca     cc   A     -A   C  C       u   u 
    gcc   gc   gcagc  cUG GAACC  UGU UG UCUGAGc ggg a
    |||   ||   |||||  ||| |||||  ||| || ||||||| ||| c
    cgg   cg   cgucg  gac cuugg  gca ac agacuug ucc u
---c   --u  -ac     ca   c     cc   a  a       -   g 


mirna_id: ptr-mir-596
hairpin:
agca        cc    CCU  -C     -  --      ac 
    cggccucu  gAAG   GC  CGGCU CC  GCGGGa  c
    ||||||||  ||||   ||  ||||| ||  ||||||  u
    gccggaga  cuuc   cg  gucga gg  cgcccu  g
----        --    --c  uc     c  ua      cc 


mirna_id: ptr-mir-602
hairpin:
---------c  u   a   cc     A  C   C A   CUG       cu  g 
          cu cuc ccc  gccuG CA GGG C CAC   CGGCCug  gu u
          || ||| |||  ||||| || ||| | |||   |||||||  ||  
          ga gag ggg  cggac gu cuc g gug   gccggac  ca u
guccccccga  c   a   aa     c  c   u c   --a       -u  c 


mirna_id: ptr-mir-604
hairpin:
------a  -    c  g     ccu   a   -u        cacu   ag 
       ga gcau gu cuuga   ucc cgc  ccuguguc    agc  g
       || |||| || |||||   ||| |||  ||||||||    |||   
       cu cgug CA GGACU   AGG GCG  GGAcacag    uug  c
agaggua  a    a  -     --U   -   UC        ucuu   ga 


mirna_id: ptr-mir-606
hairpin:
------------      c                 u         a    ug 
            uguauc uugguuuuuaguaguuu acuaugaug ggug  c
            |||||| ||||||||||||||||| ||||||||| ||||  c
            acaUAG AACUAAAAAUCAUCAAA ugauacuac ccac  a
accaguccguga      A                 -         c    cu 


mirna_id: ptr-mir-623
hairpin:
-guacaca     ag    CCU       GC       Uu  a   ua     
        guaga  cgUC   UGCAGGG  UGUUGGG  gc ucc  agcu 
        |||||  ||||   |||||||  |||||||  || |||  ||| g
        cguuu  guag   augucuc  guagccc  cg agg  ucgu 
gucuucca     cu    ---       au       uu  -   --     


mirna_id: ptr-mir-631
hairpin:
gu      cc    uA A      CG  A  -      a 
  ggggag  uggu  G CCUGGC  AG CC UCAGCu c
  ||||||  ||||  | ||||||  || || |||||| a
  ccucuc  accg  c ggacug  uc gg agucga c
--      ac    -- -      ag  a  u      a 


mirna_id: ptr-mir-651
hairpin:
--------g   u  a   c              A   CGA       ucaaa 
         aaa cu uca ugcuuUUUAGGAUA GCU   CUUUUGu     u
         ||| || ||| |||||||||||||| |||   |||||||      
         uuu ga agu acggaaaauccuau uga   gaaaacg     a
uuuguguaa   -  c   a              g   aag       uaaaa 


mirna_id: ptr-mir-661
hairpin:
-----   agga    cu    u     g  --   g     cug     ug 
     ccc    gagg  gugc guggg ca  gac caggc   agccc  g
     |||    ||||  |||| ||||| ||  ||| |||||   |||||  u
     ggg    uucc  UGCG CACCC GU  CUG GUCCG   Ucggg  u
ucggu   ---g    ag    -     G  CU   G     ---     cu 


mirna_id: ptr-mir-762
hairpin:
  c         g         gua      g        
gc cggcuccgg ucucggccc   cagucc gccggcc 
|| ||||||||| |||||||||   |||||| |||||| a
CG GCCGGGGCC GGGGUCGGG   Gucggg cggucgu 
  A         -         ---      g        


mirna_id: ptr-mir-670
hairpin:
---  u  -ac      UC        U     - UG    ug au 
   gg gg   cugaug  CCUGAGUG AUGUG G  AAcc  a  u
   || ||   ||||||  |||||||| ||||| |  ||||  |  u
   cc cc   gacugu  ggacuuac uauac c  uugg  u  a
cuu  -  guu      ga        u     u cu    gu cc 


mirna_id: ptr-mir-761
hairpin:
uggcaagc                      G  A  g 
        ggaggaGCAGCAGGGUGAAACU AC CA u
        |||||||||||||||||||||| || ||  
        ccuccucgucguuucacuuuga ug gu u
-----agu                      g  -  c 


mirna_id: ptr-mir-764
hairpin:
-----------    ua  ag    G   U    -  U        a  cu g 
           aauc  gg  gcaG UGC CACU UG CCUCCUcc ug  u g
           ||||  ||  |||| ||| |||| || |||||||| ||  | a
           uuag  cc  uguc acg guga ac ggaggagg ac  a a
gguugcuuuaa    ua  au    a   -    u  c        g  au a 


mirna_id: ptr-mir-718
hairpin:
-------   c   g   -   c   caa  u  c     -  c 
       gcg gcg ccg cgg gcg   ga gg ggcgg gc c
       ||| ||| ||| ||| |||   || || ||||| ||  
       cGC UGC GGC GCC CGC   CU Cc ccgcc cg g
cggagcc   -   G   C   C   ---  U  -     a  g 


mirna_id: rno-mir-202
hairpin:
     u           -A          ug       
guucc uuUUCCUAUGC  UAUACUUCUu  uggauc 
||||| |||||||||||  ||||||||||  ||||| u
cgagg aAAAGGGUACG  AUAUGGAGAa  aucugg 
     u           CG          --       


mirna_id: rno-mir-105
hairpin:
----------   u  A                    g ug 
          uag CA GUGCUCAGAUGUCUGUGGUg c  c
          ||| || |||||||||||||||||||| |  u
          auc gu uacgaguuuguaggcacuau g  u
caucuauggu   -  g                    - ua 


mirna_id: rno-mir-1224
hairpin:
G      CU          ------    u   accau      c 
 UGAGGA  GGGGAGGUGG      AGgg agu     uagagc a
 ||||||  ||||||||||      |||| |||     ||||||  
 acuccu  cuucuccacc      uccc ucg     gucucg g
g      cu          ccccuc    -   acucu      a 


mirna_id: rno-mir-511
hairpin:
--   a    -  A  C        CU    UCag    uaa 
  gau ccca cC UG CUUUUGCU  GCAC    uaca   u
  ||| |||| || || ||||||||  ||||    ||||    
  cua gggu GG AC GAAAACGA  UGUG    gugu   c
ac   g    A  -  A        --    -UAA    uua 


mirna_id: rno-mir-504
hairpin:
---    -            G     A    -G    gaa 
   cugu ugggAGACCCUG UCUGC CUCU  UCug   a
   |||| |||||||||||| ||||| ||||  ||||    
   gaca acccuuugggac ggacg gagg  agac   c
gga    u            g     a    ga    auu 


mirna_id: rno-mir-544
hairpin:
---   cua    u           -     U   gauug 
   cac   ggga CUUGUUAAAAA GCAGA UCU     a
   |||   |||| ||||||||||| ||||| |||     g
   gug   cucU GAACGAUUUUU CGUCU Aga     g
gua   -aa    C           A     U   accag 


mirna_id: rno-mir-568
hairpin:
--       -----        U      A  U      ACuuc       g 
  guauaca     cuauauuA GUAUAA UG AUACAC     uauaugu c
  |||||||     |||||||| |||||| || ||||||     |||||||  
  cgugugu     gauauggu cauauu au uaugug     auauaca c
cg       uugug        -      -  c      -acau       c 


mirna_id: rno-mir-582
hairpin:
-----         aUA            CA     Uaaucu 
     acucuuugg   CAGUUGUUCAAC  GUUAC      a
     |||||||||   ||||||||||||  |||||       
     ugggaaaCC   GUCAACAAGUUG  CAAug      a
aaacg         CAA            UC     uuaauc 


mirna_id: rno-mir-592
hairpin:
u   --a     c     cA        A    C        gu    a 
 gau   uuaug caugg  UUGUGUCA UAUG GAUGAUGU  ugug u
 |||   ||||| |||||  |||||||| |||| ||||||||  ||||  
 cua   aaugc guacu  aacgcagu gugc cuacugcg  acac g
a   cag     a     ac        g    a        --    g 


mirna_id: rno-mir-615
hairpin:
uc    -    c          UC     U        Cu    g ug 
  ggga gggg gggagGGGGG  CCCGG GCUCGGAU  cgag g  c
  |||| |||| ||||||||||  ||||| ||||||||  |||| |  u
  cccu cccc ccuucucccu  ggguc cgagccug  gcuu u  u
--    a    -          cu     -        --    g ua 


mirna_id: rno-mir-628
hairpin:
agcuguugugucgc       U    A   A     G       gcaa 
              uuccucA GCUG CAU UUUAC AGAGGgu    u
              ||||||| |||| ||| ||||| |||||||     
              ggggagu ugac gug gaaug ucuucca    u
-------------u       -    g   a     g       auac 


mirna_id: rno-mir-632
hairpin:
g  g    --   gga   -         -    --g   g 
 gu gcug  acg   ggu ggagauaga acga   ggu u
 || ||||  |||   ||| ||||||||| ||||   |||  
 cg uggu  ugc   CCG CCUUUGUCU UGuu   ccg c
g  g    gg   AGG   U         G    uua   g 


mirna_id: rno-mir-653
hairpin:
-    uu  -     u     U       UU     C     caagcu 
 auuu  ca uucuu cagug UGAAACA  CUCUA UGAAC      c
 ||||  || ||||| ||||| |||||||  ||||| |||||      c
 ugaa  gu aagaa guuAU ACUUUGU  GGGGU ACUUg      a
a    uc  u     c     C       UU     C     aacaaa 


mirna_id: rno-mir-668
hairpin:
--    a   u   ---        g            
  ggua gug gcc   ucggguga caugcacuuaa 
  |||| ||| |||   |||||||| |||||||||| c
  CCAU CAC CGG   GGCUCACU GUauguggaug 
ac    -   C   CUC        -            


mirna_id: rno-mir-802
hairpin:
-----guc      u     g C   A          A   Uu    c au 
        cuauua uugca U AGU ACAAAGAUUC UCC  gugu g  c
        |||||| ||||| | ||| |||||||||| |||  |||| |   
        gauaau aaugU A UCA UGUUUCUGAG AGG  CAcg c  a
ccacuucc      u     G C   C          -   --    a au 


mirna_id: rno-mir-675
hairpin:
u  --              U    AA     CC      g    
 gc  ggcccagggacUGG GCGG  AGGGC  ACAGUg acu 
 ||  |||||||||||||| ||||  |||||  |||||| || u
 cg  cugggucccUGACU CGCC  UCCCG  UGUcac ugg 
a  gu              -    AA     UA      g    


mirna_id: rno-mir-875
hairpin:
ucu    u  UAUA       U  A       uuca 
   gugg ac    CCUCAGU UU UCAGGUG    u
   |||| ||    ||||||| || |||||||    u
   cacc ug    ggaguca aa aguccac    c
--u    c  cguc       c  a       uaaa 


mirna_id: rno-mir-876
hairpin:
--   ug         U  C  UG         au  aa 
  aag  cugUGGAUU CU UG  AAUCACCAu  ca  u
  |||  ||||||||| || ||  |||||||||  ||  c
  uuc  gauacuuaa ga ac  uugguggug  gu  u
ac   gu         u  a  gu         gu  aa 


mirna_id: rno-mir-665
hairpin:
--agaaca     u   -           u      aucca  a    cu 
        ggguc ccu ugaggggccuc gccucu     gg uuau  u
        ||||| ||| ||||||||||| ||||||     || ||||   
        uccgg gga AUUCCCUGGAG CGGAGG     CC Agua  u
ucucauuc     c   c           U      ----A  -    uu 


mirna_id: rno-mir-935
hairpin:
     c  c    g    a             ccc  c   caucc 
ggcgg gg gcgg cggc guggcgggagcgg   cu ggc     u
||||| || |||| |||| |||||||||||||   || |||      
ucgcc cu cgcc gcCG CAUCGCCUUCGCC   GA Ccg     c
     -  -    -    C             AUU  C   ucugc 


mirna_id: rno-mir-201
hairpin:
--     g   -  C  U   U     A      uuc   a 
  guaca uac cu AC CAG AAGGC UUGUUC   uau c
  ||||| ||| || || ||| ||||| ||||||   |||  
  cgugu aug GA UG GUC UUCCG GACAAG   aua u
aa     a   c  -  U   U     C      Uaa   a 


mirna_id: rno-mir-293
hairpin:
--cu        -      G    A      g    u 
    gugauACU CAAACU UGUG CACUUU uuuc u
    |||||||| |||||| |||| |||||| ||||  
    cauUGUGA GUUUGA ACGC GUGAag aagg u
uagc        C      A    C      -    u 


mirna_id: rno-mir-294
hairpin:
a    c    U            C  A   aa   u 
 uagc augC CAAAAUGGAGGC CU UCU  gcu u
 |||| |||| |||||||||||| || |||  |||  
 gucg ugug guuuuaccuucg ga aga  uga u
-    u    u            u  a   --   a 


mirna_id: rno-mir-295-1
hairpin:
--   uuu  u  g       U    -     AC     - au 
  cau   gg ga ACUCAAA GUGG GGCAC  UUCUg g  u
  |||   || || ||||||| |||| |||||  ||||| |   
  gug   cc cU UGGGUUU CAUC UCGUG  Aagau c  a
gg   --u  u  G       U    A     -A     g gu 


mirna_id: rno-mir-465
hairpin:
--u  ag   c          C  UG     GU   ga 
   gc  ugc cUAUUUAGAA GG  CUGGU  Gau  a
   ||  ||| |||||||||| ||  |||||  |||  u
   cg  aug GAUGAGUCUU CC  GACUA  uug  g
auu  ga   a          U  GU     GU   aa 


mirna_id: rno-mir-547
hairpin:
-     --a   a      C    U      CC   uuaau 
 gugug   ugu UCACUU AGGA GUACCA  CAu     g
 |||||   ||| |||||| |||| ||||||  |||      
 cacac   auA AGUGAA UUCU CAUGGU  gua     g
u     gua   G      U    U      UA   uaaaa 


mirna_id: rno-mir-667
hairpin:
      --acu     C  U     U GA    -  AG    ccauac 
gugggu     ggccu GG GCUGG G  GCAG UG  CACg      a
||||||     ||||| || ||||| |  |||| ||  ||||       
cacccg     ccggA CC CGACC C  CGUC AC  GUgu      u
      gaucc     A  -     - AC    C  -A    cuauau 


mirna_id: rno-mir-761
hairpin:
u  c  -gu                      G  A  g 
 gg aa   ggaggaGCAGCAGGGUGAAACU AC CA u
 || ||   |||||||||||||||||||||| || ||  
 cc uu   ccuccucgucguuucacuuuga ug gu u
a  c  agu                      g  -  c 


mirna_id: rno-mir-764
hairpin:
u    ac     aa   uc  a     G   U   -   U           ccua 
 caac  aauca  auc  gg ggcaG UGC CAC AUG CCUCCUCCAug    c
 ||||  |||||  |||  || ||||| ||| ||| ||| |||||||||||     
 guug  uuagu  uag  cc cUGUC ACG GUG UAC GGAGGAGguac    a
g    cu     --   ua  a     A   -   A   C           auac 


mirna_id: rno-mir-666
hairpin:
   -au  --ug    c   -        --A  -     GAG      -  ag 
cug   uc    ccug gug gAGCGGGC   CG GCUGU   AGcccc cu  g
|||   ||    |||| ||| ||||||||   || |||||   |||||| ||   
gac   ag    ggac cgc CUCGUCCG   GU CGACG   UCGGgg ga  u
   agc  ugaa    a   a        CUA  G     ---      c  ca 


mirna_id: rno-mir-759
hairpin:
ggauuau             cc     u   AG          A   U  Cu 
       aauaaauuaaaug  uaaac gGC  AGUGCAAACA UUU GA  c
       |||||||||||||  ||||| |||  |||||||||| ||| ||   
       uuguuuaauuuac  auuug ucg  ucacguuugu aaa cu  a
------c             aa     -   -g          -   u  ag 


mirna_id: rno-mir-678
hairpin:
gugga    g    g   ag  g      gguau    g    ccg 
     cugu gcuu ccg  cc ugcucc     gaga augg   a
     |||| |||| |||  || ||||||     |||| ||||    
     gacg uGGA GGU  GG ACGGGG     CUCU ugcc   g
-----    g    -   CA  A      -----    G    cac 


mirna_id: rno-mir-711
hairpin:
ccua    uga        g      g      gg 
    acuu   aucucuuc uagggu cuucag  a
    ||||   |||||||| |||||| ||||||   
    uGAA   UAGAGAGG GUCCCA GGGguc  a
-aac    -UG        -      -      ga 


mirna_id: rno-mir-496
hairpin:
     u    u        U     GU         uua 
agugu cgaa ggAGGUUG CCAUG  GUGUUCauu   u
||||| |||| |||||||| |||||  |||||||||    
ucacg gcuu CCUCUAAC GGUAC  UAUGAguag   u
     -    u        C     AU         uau 


mirna_id: iltv-mir-I7
hairpin:
                                   a   a 
agaacaaacauucgcaccucaguauuaaaaauaua uau g
||||||||||||||||||||||||||||||||||| |||  
ucuuguuuGUAAGCGUGGAGUCAUAAUUUUuauau aua a
                                   c   u 


mirna_id: hvt-mir-H10
hairpin:
       CUC        C    A   cucua 
ggUCCUU   GCGGAUAG GUAG UGU     u
|||||||   |||||||| |||| |||      
cuaggga   cgccuguu cauc aca     u
       ---        a    g   auugc 


mirna_id: hvt-mir-H12
hairpin:
   UU          C   G  G   GUCua 
uac  UCUUAUGGAC GCC AG UGU     u
|||  |||||||||| ||| || |||      
AUG  GGAGUACCUG CGG UC ACa     u
   CU          C   A  G   auugc 


mirna_id: hvt-mir-H13
hairpin:
   guaUUU    -   UG           C  ua 
ggc      UCUC CGG  AGCGUAGCUGC ug  g
|||      |||| |||  ||||||||||| ||  u
ccg      aggg gcc  uugcaucgacg au  c
   -aucuu    c   ug           -  ug 


mirna_id: hvt-mir-H14
hairpin:
    cUC                  A    g     
cgga   AUUCAGCGGGCAAUGUAG CUGU uacc 
||||   |||||||||||||||||| |||| ||| a
guCU   UGGGUCGCCCGUUACAUC GAca guga 
    --U                  -    -     


mirna_id: hvt-mir-H15
hairpin:
       AA  G          U  -  a  u 
cucUCGG  CA GCGUAUUUUU GC gu uu u
|||||||  || |||||||||| || || ||  
GGGAGUC  GU CGCAUAGAAA Cg cg ag a
       GG  A          -  a  a  u 


mirna_id: hvt-mir-H16
hairpin:
ac   -   U       G        -       
  ccU UCA GUCGGGG UGUUUGUG uguuug 
  ||| ||| ||||||| |||||||| ||||| u
  gGA AGU UAGCCCC AUAAAUac acgagg 
-u   C   U       G        g       


mirna_id: hvt-mir-H17
hairpin:
   cU   C       G        -    u 
gcc  UCA GUCGGGG UGUUUGUG uguu g
|||  ||| ||||||| |||||||| |||| u
UGG  AGU UAGCCCC ACAAAUac acga g
   AC   U       G        g    a 


mirna_id: hvt-mir-H18
hairpin:
agcccA     C    G GG       U     u 
      UCAAA CGGG G  AUUUCAG auguu g
      ||||| |||| |  ||||||| ||||| u
      AGUUU GCCC C  UAGAGUC uacga g
uuAAGC     A    G -A       -     a 


mirna_id: hvt-mir-H11
hairpin:
         u  aaa     ggcag   aua    a     a 
gguggugaa gu   ccguu     cau   uucg cgcga u
||||||||| ||   |||||     |||   |||| |||||  
cUACCAUUU CG   GGUAA     GUA   Gggc gcgcu u
         -  ---     ----A   -GG    g     g 


mirna_id: peu-MIR2911
hairpin:
      u    aa   --      -  u  gu ga      ga     u 
ucccag cccg  ccc  gucggc ug cg  g  cugcuc  gcugc c
|||||| ||||  |||  |||||| || ||  |  ||||||  |||||  
AGGGUC GGGC  GGG  CGGccg gc gc  c  ggcgag  cggcg c
      -    AG   GC      u  -  ug ug      aa     c 


mirna_id: peu-MIR2912a
hairpin:
U      --  C          -     c  ugaaca   ucu  gu  c     -a       a  ucuccguu   gcua 
 CUAGAA  CU GAGAUAUGGG Cugaa ac      aug   gg  ug aggac  gauucug cu        guu    a
 ||||||  || |||||||||| ||||| ||      |||   ||  || |||||  ||||||| ||        |||    g
 gaucuu  ga uucuauaucc gauuu ug      uac   cc  ac uucug  uuaagau ga        cag    a
u      uc  -          a     -  --uaag   --u  uc  u     ag       -  uaaaccuu   auuu 


mirna_id: peu-MIR2912b
hairpin:
UC     --  C            g  c   ---gaau  u       cug        ---a      c   ucuu    u 
  UAGAA  CU GAGAUAUGGGCu aa acu       ag gucuagg   caggacag    uuucga uuc    uugu g
  |||||  || |||||||||||| || |||       || |||||||   ||||||||    |||||| |||    ||||  
  aucuu  ga uucuguaucugg uu uga       uc cagauuc   guuuuguc    aaaguu aag    aaca c
cu     uc  -            a  u   aaguacu  u       uaa        ggca      c   -uuu    u 


mirna_id: peu-MIR2913
hairpin:
   G C         A        -ca    aug   --ac   cac    au 
GAG U GGGGAUUGC AGGAGagc   acgc   ggc    gcg   ggca  u
||| | ||||||||| ||||||||   ||||   |||    |||   ||||   
cuc a ccccuaacg uccucucg   ugcg   ccg    cgc   ccgu  u
   g c         c        aua    --a   cacc   --a    aa 


mirna_id: peu-MIR2916
hairpin:
U  -      ---    A   U   AUa   -    -a   ucaac   a 
 GG GGACUC   GAAG CGA CAU   cca uccu  guc     cau a
 || ||||||   |||| ||| |||   ||| ||||  |||     ||| a
 cc ccugag   cuuc guu gua   ggu aggg  cag     gua c
a  g      gau    -   -   ggc   u    ac   ---cc   g 


mirna_id: bta-mir-2917
hairpin:
-aaga    ---c   GA       --        -----u  u 
     gcug    uAU  CUGACAU  GGACUucu      cc u
     ||||    |||  |||||||  ||||||||      || u
     cgau    aug  gacugua  ucugaaga      gg c
aagaa    ucac   gg       ga        cacacu  u 


mirna_id: eca-mir-1179
hairpin:
---------        ---gAA         C        Gu u ua 
         gaaaggga      GCAUUCUUU AUUGGUUG  g g  u
         ||||||||      ||||||||| ||||||||  | |   
         cuuuuccu      cguaggaga uaaccgac  c c  u
ucgaucagu        auuuac         c        ug u cg 


mirna_id: eca-mir-1244
hairpin:
      uc  --gu    uu  uug    u    uu 
aaccau  ca    aacu  cu   caua guac  a
||||||  ||    ||||  ||   |||| ||||   
UUGGUA  GU    UUGG  GG   Guau caug  g
      GA  AUGU    UU  UGA    -    uc 


mirna_id: eca-mir-1296
hairpin:
accua    a           C CU       U     uu     a 
     ccua cugggUUAGGG C  GGCUCCA CUCCu  aggaa a
     |||| ||||||||||| |  ||||||| |||||  |||||  
     gggu gacccaauccc g  ucggggu gaggg  uucuu c
-uguc    c           a cu       -     gu     c 


mirna_id: eca-mir-146b
hairpin:
  u   u  G        A    A    CU  ga  u 
cc ggc cU AGAACUGA UUCC UAGG  gu  gc c
|| ||| || |||||||| |||| ||||  ||  ||  
gg ccg GG UCUUGACU AGGG AUCC  Ua  cg c
  c   u  -        C    -    CG  aa  a 


mirna_id: eca-mir-1839
hairpin:
--AA         AAC        uu gca 
    GGUAGAUAG   AGGUCUUG  u   a
    |||||||||   ||||||||  |   a
    ccaucuauu   uccagaac  a   a
acaa         -ca        uu aau 


mirna_id: eca-mir-184
hairpin:
acauc         c      ag     -    ug 
     uccuuauca uuuucc  ccagc uuug  a
     ||||||||| ||||||  ||||| ||||   
     GGGAAUAGU AAGAGG  GGUug gaau  c
-ggaU         C      CA     u    cu 


mirna_id: eca-mir-1892
hairpin:
ug     -----a uu   cu   g   -a          aga 
  gauau      u  cua  cuu auu  aaguuuugua   a
  |||||      |  |||  ||| |||  ||||||||||    
  uuaua      A  GGU  GGG UGG  UUUAggacau   a
--     ggaggg GG   AG   G   GG          aac 


mirna_id: eca-mir-190a
hairpin:
    - UG               UA     uuau 
cugu g  AUAUGUUUGAUAUAU  GGUug    u
|||| |  |||||||||||||||  |||||     
gaca c  uauacaaacuauaua  ucaac    u
    u cu               --     cuaa 


mirna_id: eca-mir-1905a
hairpin:
g        -   au c     auc    c   c 
 ucugcugu ugg  g gcuug   gugg gcc u
 |||||||| |||  | |||||   |||| |||  
 gGAUGGCG ACC  C CGAGC   CACc cgg u
g        C   AU C     -AC    c   g 


mirna_id: eca-mir-208a
hairpin:
u    g    g           g  c  gg      c  a 
 uccu ugac ggcgagcuuuu gc cg  uuauac ug u
 |||| |||| ||||||||||| || ||  |||||| || g
 agga acug uUGUUCGAAAA CG GC  AAUAug ac c
g    g    g           A  A  AG      c  u 


mirna_id: eca-mir-211
hairpin:
---u     uug     U         CA     U    agg  u 
    gugac   ugggc UCCCUUUGU  UCCUU GCCU   gc c
    |||||   ||||| |||||||||  ||||| ||||   || u
    cacug   acucg ggggaaacg  aggga cggg   ug g
ucuc     uug     u         uc     -    --g  a 


mirna_id: eca-mir-7-1
hairpin:
U  A     A U     U       ucuu    
 GG AGACU G GAUUU GUUGUug    gcu 
 || ||||| | ||||| |||||||    || g
 cc ucuga c cugaa caacaac    cgc 
g  g     c -     -       ---c    


mirna_id: eca-mir-124-1
hairpin:
c   cc        a   ga        uaaau 
 ucu  guguucac gcg  ccuugauu     g
 |||  |||||||| |||  ||||||||     u
 aga  CGUAAGUG CGC  GGAAUuaa     c
-   aC        G   AC        cauac 


mirna_id: eca-mir-1302-1
hairpin:
aauuuuuc    c  -         ugc 
        agua aa uaugucuca   a
        |||| || |||||||||   a
        UCAU UU AUACAGGGU   c
uuauaAAA    A  C         Uua 


mirna_id: eca-mir-147b
hairpin:
--         -ua     acca   u    aa     a  a 
  uaggaaugu   aggag    uuc gcac  acugg gu u
  |||||||||   |||||    ||| ||||  ||||| ||  
  auuuuuacA   UCUUC    AAG CGUG  UGacu ua g
gg         UCG     -GUA   C    --     a  g 


mirna_id: eca-mir-200a
hairpin:
c    - c   g        -             c    uuuc     
 uggg c ccu ugggcauc uuaccggacagug ugga    ucgg 
 |||| | ||| |||||||| ||||||||||||| ||||    ||| c
 accc g gga acuUGUAG AAUGGUCUGUCAC AUcu    agcu 
c    a u   a        C             A    ---c     


mirna_id: eca-mir-200b
hairpin:
       c   cu   ug     c      u ugu 
gccgucg cau  uac  ggcag auugga g   c
||||||| |||  |||  ||||| |||||| |    
cggcAGU GUA  AUG  CCGUC UAAUcu c   u
       A   --   GU     A      - ugg 


mirna_id: eca-mir-302a
hairpin:
ccac    u         u           gaa 
    cacu aaacgugga guacuugcuuu   a
    |||| ||||||||| |||||||||||   c
    GUGA UUUGUACCU CGUGAAUgaaa   u
-guA    U         U           aua 


mirna_id: eca-mir-302b
hairpin:
acucu    a   uu        c ug   u    gacu 
     cuuu acu  aacaugga g  cuu cugu    u
     |||| |||  |||||||| |  ||| ||||     
     gaaG UGA  UUGUACCU C  GAA gaua    g
----u    A   UU        U GU   U    aaac 


mirna_id: eca-mir-302c
hairpin:
    ug  uu             c    -g  u 
ccuu  cu  aacauggggguac ugcu  ug a
||||  ||  ||||||||||||| ||||  || a
ggaG  GA  UUGUACCUUCGUG AUga  ac a
    GU  CU             A    aa  g 


mirna_id: eca-mir-302d
hairpin:
  u u   uu                cugugac 
cc c acu  aacauggaggcacuug       u
|| | |||  ||||||||||||||||       u
gg G UGA  UUGUACCUUCGUGAAU       g
  U -   UU                aaaaaga 


mirna_id: eca-mir-30e
hairpin:
g        uu  ua            UU           g aag u 
 ggcagucu  gc  cUGUAAACAUCC  GACUGGAAGcu u   g g
 ||||||||  ||  ||||||||||||  ||||||||||| |   |  
 ccgucgga  cg  gacauuuguagg  cugacuuucga g   c u
a        --  gc            --           g aga u 


mirna_id: eca-mir-34a
hairpin:
U        -   A          guga   a 
 GGCAGUGU CUU GCUGGUUGUu    gua u
 |||||||| ||| ||||||||||    |||  
 ccgucaua gaa cgacuaacga    cgu a
-        u   -          aggg   g 


mirna_id: eca-mir-367
hairpin:
  a             ua     c   -   ca 
cc ucacuguugcuaa  ugcaa ucu guu  a
|| |||||||||||||  ||||| ||| |||  u
gg AGUGGUAACGAUU  ACGUU Agg caa  a
  c             UC     A   u   ac 


mirna_id: eca-mir-429
hairpin:
--     u -          cg       cugcg 
  gggcg c uuaccagaca  guuagau     u
  ||||| | ||||||||||  |||||||      
  ccuGC G AAUGGUCUGU  UAAUcug     c
ua     C U          CA       ucuuc 


mirna_id: eca-mir-492-1
hairpin:
gAG  G           GAU        ccacc 
   GA CUGCGGGACAA   UCUUgggg     a
   || |||||||||||   ||||||||     u
   cu gacgucuuguu   agaaccuc     u
cag  a           ---        aagag 


mirna_id: eca-mir-551a
hairpin:
u       c         gag     ucuga 
 ggaaauc agagugggu   gccug     c
 ||||||| |||||||||   |||||      
 CCUUUGG UCUCACCCA   CGgau     c
A       U         --G     cuuua 


mirna_id: eca-mir-598
hairpin:
u    c    a     gc     gu cg -   gga 
 gaug uggc gugau  cgaug  g  g gcu   a
 |||| |||| |||||  |||||  |  | |||    
 cuac ACUG UACUG  GCUAC  C  c ugg   a
a    u    C     UU     UG AU g   ggu 


mirna_id: eca-mir-761
hairpin:
--                       G  A  g 
  aggaggaGCAGCAGGGUGAAACU AC CA u
  ||||||||||||||||||||||| || ||  
  uccuccucgucguuucacuuuga ug gu u
ag                       g  -  c 


mirna_id: eca-mir-1261
hairpin:
u    ---    UU       GGCUUaagggaauauuguggcu 
 gcuG   UGGA  AGGCUUU                      g
 ||||   ||||  |||||||                      a
 cgac   accu  uucgaag                      u
-    uau    cu       ucaccagaccuaucuucuaguu 


mirna_id: eca-mir-138-1
hairpin:
c u   u  AG             UCA     -ac   c  ug 
 g ugc gc  CUGGUGUUGUGAA   GGCCG   gag ag  c
 | ||| ||  |||||||||||||   |||||   ||| ||   
 c acg ug  gaccacagcacuu   ucggc   uuc uc  a
a u   u  -g             -ua     cca   -  cu 


mirna_id: eca-mir-140
hairpin:
cCA             A       uu   uc 
   GUGGUUUUACCCU UGGUAGg  acg  a
   ||||||||||||| |||||||  |||   
   CACCAAGAUGGGA ACCAUcu  ugu  u
-GG             C       --   cg 


mirna_id: eca-mir-218-1
hairpin:
UU         CU        gg    -  g 
  GUGCUUGAU  AACCAUGU  uugc ca g
  |||||||||  ||||||||  |||| ||  
  cacgaacug  uugguaca  aaug gu u
ac         cc        -a    a  a 


mirna_id: eca-mir-328
hairpin:
  ag           ga     u     a aaa  g 
gg  cgggggggcag  ggggc caggg g   gu u
||  |||||||||||  ||||| ||||| |   ||  
cc  GCCUUCCCGUC  UCCCG GUCcc c   cg g
  cU           UC     -     - -ga  u 


mirna_id: eca-mir-684
hairpin:
guagg     c     -uuag       u      -   --uaaa g 
     gcaau ugucu     gaaggga agauua cuc      a a
     ||||| |||||     ||||||| |||||| |||      |  
     uguug acgGA     CUUCCCU UUUGAu gag      u a
-----     u     CUUAA       -      a   ccuaag a 


mirna_id: eca-mir-95
hairpin:
a   c     gc          ug           gaga 
 aca agugg  gcucaauaaa  uuuguugaauu    u
 ||| |||||  ||||||||||  |||||||||||    g
 ugu ucacc  CGAGUUAUUU  GGGCAACUUaa    c
g   c     aA          CU           auug 


mirna_id: eca-mir-129a
hairpin:
u    -       C   CU      G   uu cu  c 
 ggau CUUUUUG GGU  GGGCUU Cug  c  cu a
 |||| ||||||| |||  |||||| |||  |  ||  
 ucUA GAAAAAC CCA  CCCGAA gac  g  ga a
-    U       C   UU      g   -u au  c 


mirna_id: eca-mir-1302b-2
hairpin:
ga   c            c       a           auaauu     a c             ugc 
  aug ccgguuaaauuu aauuuca aucaacaauga      uuuua u uaaguauguccca   a
  ||| |||||||||||| ||||||| |||||||||||      ||||| | |||||||||||||   a
  ugc gguuaauuuaaa uuaaagu uaguuguuauu      aAGAU A AUUCAUACAGGGU   u
-c   a            c       a           ----ac     C U             Uua 


mirna_id: eca-mir-153-1
hairpin:
--   -             gu       -a  aa 
  gug ucauuuuugugau  ugcagcu  gu  u
  ||| |||||||||||||  |||||||  ||  a
  uaC AGUGAAAACACUG  ACGUUga  cg  u
gu   U             AU       cc  ag 


mirna_id: eca-mir-182
hairpin:
     uU       U -G      UCA      ugaggu 
accau  UUGGCAA G  UAGAAC   CACUGg      a
|||||  ||||||| |  ||||||   ||||||       
uggua  aaccguu c  aucuug   guggcc      a
     uc       - ag      ---      uagggu 


mirna_id: eca-mir-183
hairpin:
cu  g      --AC     GA        --   ac 
  gu UAUGGC    UGGUA  AUUCACUg  uga  a
  || ||||||    |||||  ||||||||  |||   
  ca auaccg    gccau  uaagugac  gcu  g
-a  a      ggaa     --        ug   cu 


mirna_id: eca-mir-196b
hairpin:
--     uc      uU       U  C           ucca 
  acugg  ggugau  AGGUAGU UC UGUUGUUGGGa    g
  |||||  ||||||  ||||||| || |||||||||||     
  ugacu  ucauua  uccguca ag acgacagcucu    c
gu     --      cu       c  c           cuuu 


mirna_id: eca-mir-29a
hairpin:
g            uuu       c    ucaa 
 augacugauuuc   ugguguu agag    u
 ||||||||||||   ||||||| ||||    a
 uAUUGGCUAAAG   ACCACGA Ucuu    u
-            UCU       -    uuaa 


mirna_id: eca-mir-335
hairpin:
-   c        A         C        U  gu 
 gag gggggUCA GAGCAAUAA GAAAAAUG uu  c
 ||| |||||||| ||||||||| |||||||| ||   
 cuc ccuccagu cucguuauu cuuuuugc aa  a
a   u        c         a        c  au 


mirna_id: eca-mir-489
hairpin:
       c     g            gc c     -auuu a 
guggcag uuggu gucguaugugug  g cauuu     g c
||||||| ||||| ||||||||||||  | |||||     |  
caucguc aauCG CGGCAUAUACAC  C GUGag     c c
       a     G            UA A     gauuu c 


mirna_id: eca-mir-490
hairpin:
      C      --         G   cac   u 
ucgaca CAUGGA  UCUCCAGGU GGU   guu a
|||||| ||||||  ||||||||| |||   |||  
aguuGU GUACCU  GGAGGUCCA Cca   uag g
      C      CA         A   -ca   a 


mirna_id: eca-mir-592
hairpin:
u    c     ca        A    C       -     g 
 uaug cauga  UUGUGUCA UAUG GAUGAUG Ugugu a
 |||| |||||  |||||||| |||| ||||||| |||||  
 augc guacu  aacgcagu gugc cuacugc acacg u
a    a     ac        g    a       g     g 


mirna_id: eca-mir-653
hairpin:
      cuu              U    GC     -c  gcu 
ucauuc   caGUGUUGAAACAA CUCU  UGaac  ag   c
||||||   |||||||||||||| ||||  |||||  ||    
aguaag   guuauaacuuuguu gagg  acuug  uc   c
      aac              u    uc     ca  aaa 


mirna_id: eca-mir-671
hairpin:
    a        A   A      GA           -u   g 
ggcc ggaagagg GGA GCCCUG  GGGGCUGGAGg  gau g
|||| |||||||| ||| ||||||  |||||||||||  |||  
ccgg ccuucuCC CCU CGGGAC  UCUUGGCCUcc  uug a
    g        A   -      --           uu   u 


mirna_id: eca-mir-96
hairpin:
ugg  g  U        A      UU      ---   uc 
   cc au UUGGCACU GCACAU  UUGCUu   gug  u
   || || |||||||| ||||||  ||||||   |||   
   gg ua aaccguga cgugua  aacgag   cgc  c
aaa  g  u        -      cu      ucu   cu 


mirna_id: eca-mir-101-1
hairpin:
c                  a    gucag 
 ucaguuaucacagugcug ugcu     u
 |||||||||||||||||| ||||      
 AGUCAAUAGUGUCAUGAC AUgg     u
A                  -    aaauc 


mirna_id: eca-mir-135b
hairpin:
     --                   CAU          uugcug 
gcucu  gcuguggccUAUGGCUUUU   UCCUAUGUGA      u
|||||  |||||||||||||||||||   ||||||||||       
cgggg  ugacaucggguaccgaaaa   gggauguacu      u
     ag                   -uc          caaauc 


mirna_id: eca-mir-137
hairpin:
      ug   g           ug a     -  g 
cuucgg  acg guauucuuggg  g uaaua cg a
||||||  ||| |||||||||||  | ||||| || u
ggagcu  UGC CAUAAGAAUUC  U AUUgu gc u
      GA   G           GU -     u  a 


mirna_id: eca-mir-15b
hairpin:
   U       C  C      UA   a  ac 
cug AGCAGCA AU AUGGUU  CAu cu  a
||| ||||||| || ||||||  ||| ||  g
gau ucgucgu ua uacuaa  gua ga  u
   c       u  u      gc   -  ac 


mirna_id: eca-mir-16-1
hairpin:
  uc    cU         UA        C  ag   aau 
gu  cgcu  AGCAGCACG  AAUAUUGG Gu  uga   a
||  ||||  |||||||||  |||||||| ||  |||    
cg  gcga  ucgucgugu  uuauaacc ca  auu   a
  gu    uu         ua        a  -a   aua 


mirna_id: eca-mir-186
hairpin:
                U     U      ucu  uu 
acuuucCAAAGAAUUC CCUUU GGGCUu   ga  u
|||||||||||||||| ||||| ||||||   ||   
ugaaggguuuuuuaag ggaaa cccgaa   uu  u
                u     -      --u  ua 


mirna_id: eca-mir-1905b
hairpin:
       -   a  -c   u a    -u       
cugcugc ugg ug  gcu g uggu  gccccc 
||||||| ||| ||  ||| | ||||  ||||| u
GAUGGCG AUC AC  CGA C ACca  cggggu 
       C   -  CC   C -    cc       


mirna_id: eca-mir-190b
hairpin:
--u   u     -U               G     -   aa 
   gcu cugug  GAUAUGUUUGAUAUU GGUUg uuu  u
   ||| |||||  ||||||||||||||| ||||| |||   
   uga gacau  uuauacaaacuguaa ucaac aaa  u
ggg   c     uc               a     c   ga 


mirna_id: eca-mir-199a
hairpin:
    c   gcC       U        C   --UCa  ac 
gcuc guc   CCAGUGU CAGACUAC UGU     gg  a
|||| |||   ||||||| |||||||| |||     ||   
cggg cag   GGUUACA GUCUGAUG ACA     cc  a
    u   AUU       C        -   uguug  gu 


mirna_id: eca-mir-205
hairpin:
      UC           C        ucuca 
cucuug  CUUCAUUCCAC GGAGUCUG     u
||||||  ||||||||||| ||||||||     a
gaggac  gaagugaggug cuuuagac     c
      uu           a        caacc 


mirna_id: eca-mir-214
hairpin:
u          aca            aacau 
 cugccugucu   cuugcugugcag     c
 ||||||||||   ||||||||||||     c
 GACGGACAGA   GGACGACAuguc     g
U          CAC            cacuc 


mirna_id: eca-mir-29c-2
hairpin:
a        acaggc           ucc       ---     u 
 ucucuuac      ugaccgauuuc   ugguguu   cagag c
 ||||||||      |||||||||||   |||||||   ||||| u
 gggggaug      AUUGGCUAAAG   ACCACGA   guuuu g
a        --cagu           UUU       Ucu     u 


mirna_id: eca-mir-488
hairpin:
    a  a   cu  c   u      a  c        g u 
gaga uc ucu  cc aga aauggc cu ucaaacaa u u
|||| || |||  || ||| |||||| || |||||||| | c
cucu ag aga  GG UCU UUAUCG GA AGUUuguu a c
    c  a   CU  U   -      -  A        g a 


mirna_id: eca-mir-92b
hairpin:
    g     ga       c            uucuu 
gggc ggagg  cgggacg ggugcaguguug     u
|||| |||||  ||||||| ||||||||||||     c
cccg CCUCC  GCCCUGC UCACGUUAUaac     c
    g     -G       -            cgccc 


mirna_id: eca-mir-9a
hairpin:
uug   g   UC               G      u  ug 
   guu uua  UUUGGUUAUCUAGCU UAUGAg gg  u
   ||| |||  ||||||||||||||| |||||| ||  g
   uaa aau  aagccaauagaucga auacuu cu  g
-aa   a   ga               a      -  ga 


mirna_id: eca-mir-1291a
hairpin:
-  ug     --  --g U    -   A  GA                
 gg  ggaua  cc   g GGCC CUG CU  AGACCAGCAGUuaug 
 ||  |||||  ||   | |||| ||| ||  |||||||||||||| c
 cc  ucugu  gg   c ccgg gac ga  uuugguugucgauau 
a  cu     ca  aaa -    a   -  gc                


mirna_id: eca-mir-1302d-4
hairpin:
u    a      c  auaa   a                          ugc 
 ugga uuuaga aa    uga gaauuuuuuaguguaaguaugucuua   a
 |||| |||||| ||    ||| ||||||||||||||||||||||||||   a
 acuu aagucu uu    auu uuuaaaAAAUCGUAUUCAUACAGGGU   u
a    a      a  ---g   a                          Uua 


mirna_id: eca-mir-141
hairpin:
   u       --    u        -   ugg  ua 
ggg ccaucuu  ccag acaguguu gga   uc  a
||| |||||||  |||| |||||||| |||   ||  u
ccc GGUAGAA  GGUC UGUCACAA ccu   ag  u
   -       AU    -        U   cga  ug 


mirna_id: eca-mir-148b
hairpin:
   a       uG         U  A    CA    gugg u 
agc uuugagg  AAGUUCUGU AU CACU  GGcu    c c
||| |||||||  ||||||||| || ||||  ||||    | u
ucg aagcucU  UUCAAGACA UA GUGA  CUga    g c
   a       GU         C  C    --    --aa u 


mirna_id: eca-mir-149
hairpin:
g     -    a   U U G      G     A     -gug  u 
 ccggc gccc ggc C G CUCCGU UCUUC CUCCC    ug g
 ||||| |||| ||| | | |||||| ||||| |||||    ||  
 ggccg cggg ucg g c ggggca ggagg gaggg    gc u
a     u    g   u u g      g     -     agga  c 


mirna_id: eca-mir-153-2
hairpin:
c     -             -c       --   au 
 cagug ucauuuuugugau  ugcagcu  agu  u
 ||||| |||||||||||||  |||||||  |||   
 guuaC AGUGAAAACACUG  ACGUUga  ucg  c
-     U             AU       cc   cu 


mirna_id: eca-mir-200c
hairpin:
-     -      a        u   u   gg 
 ccguc uuaccc gcaguguu ggg gcu  u
 ||||| |||||| |||||||| ||| |||  u
 GGUAG AAUGGG CGUCAUAA cuc uga  g
A     U      C        U   -   gg 


mirna_id: eca-mir-615
hairpin:
ac  --        c          UC     U        Cu    g ug 
  gc  gggagggg gggagGGGGG  CCCGG GCUCGGAU  cgag g  c
  ||  |||||||| ||||||||||  ||||| ||||||||  |||| |  u
  cg  uccucccc ccCUCUCCCU  GGGUC CGAGCCUg  gcuu u  u
--  ac        -          CU     -        --    g ua 


mirna_id: eca-mir-763
hairpin:
      gga   -gc           ga         a CA         AAC   U      
aaugac   ggu   aggcauuuccu  ggauuaaug C  GCUGGGAGG   CAG GGCcc 
||||||   |||   |||||||||||  ||||||||| |  |||||||||   ||| |||| u
uugcug   ucg   ucuguaaagga  cuuaauuac g  cggcccucc   guc ucggu 
      aag   uuu           ac         c ac         ---   -      


mirna_id: eca-mir-100
hairpin:
A   CG    UC   A      g  au 
 ACC  UAGA  CGA CUUGUG ug  a
 |||  ||||  ||| |||||| ||   
 ugg  aucu  guu gaacac ac  g
a   au    gu   c      -  cu 


mirna_id: eca-mir-125b
hairpin:
u    uc   u  -a    U    C           Au     c 
 gcgc  cuc ca  UCCC GAGA CCUAACUUGUG  guuua c
 ||||  ||| ||  |||| |||| |||||||||||  ||||| g
 cgug  gag gu  aggg uucu ggauugggcac  uaaau u
c    cu   c  cg    -    c           -c     u 


mirna_id: eca-mir-1302c-5
hairpin:
c     a           ug g      u aauaau                a  ccau   a 
 aguua auuugaauuuc  g aaacaa g      uuuuuaguguaaguau uc    gca u
 ||||| |||||||||||  | |||||| |      |||||||||||||||| ||    ||| a
 ucaau uagacuuaaag  u uuuguu c      aaAAAUCAUAUUCAUA AG    CGU u
-     g           uu g      - -guaau                C  ----   U 


mirna_id: eca-mir-139
hairpin:
       -   U  A            -g  g 
uacUCUA CAG GC CGUGUCUCCAGu  ug c
||||||| ||| || ||||||||||||  ||  
aUGAGGU GUC CG GCGCAGAGGucg  gc u
       U   C  -            ga  c 


mirna_id: eca-mir-1905c
hairpin:
c     c    -     -   a  -c   u a      c   c 
 gugug gucc gcugc ugg ug  gcu g uggugg gcc u
 ||||| |||| ||||| ||| ||  ||| | |||||| |||  
 cgcac cggG UGGCG ACC AC  CGA C ACCACc cgg u
a     a    A     C   -  CC   C -      c   g 


mirna_id: eca-mir-23a
hairpin:
  c   c     -       g    g      c  c 
gg cgg ugggg uuccugg gaug gauuug ug u
|| ||| ||||| ||||||| |||| |||||| || u
cc gcc aCCUU AGGGACC UUAC CUAaac ac g
  a   a     U       G    A      -  u 


mirna_id: eca-mir-24-1
hairpin:
    c  g   a         aaca     g  u 
cucc gu ccu cugagcuga    caguu gu u
|||| || ||| |||||||||    ||||| ||  
gagG CA GGA GACUUGACU    GUcag cg g
    A  A   C         --CG     a  u 


mirna_id: eca-mir-27a
hairpin:
cu    a  a         ug  u       -  g  ca 
  gggg gc gggcuuagc  cu gugagca gg uc  c
  |||| || |||||||||  || ||||||| || ||   
  cccc CG CUUGAAUCG  GA CACUUgu cu ag  a
-g    c  C         GU  -       a  g  cc 


mirna_id: eca-mir-326
hairpin:
cuc        g            c       uugu  a     guugu 
   gucugucu uugggcuggagg agggccu    ga ggcga     g
   |||||||| |||||||||||| |||||||    || |||||      
   uaggcgga gaccCGACCUCC UCCCGGG    CU CCgcu     c
acu        -            U       ---U  -     agggu 


mirna_id: eca-mir-34b
hairpin:
     cg    -guA       UAA    C        cu u 
gugcu  guuu    GGCAGUG   UUAG UGAUUGUa  c g
|||||  ||||    |||||||   |||| ||||||||  |  
cacgg  caaa    CCGUCAC   AAUC ACUAAcau  g g
     aa    aCUA       CUC    -        uc a 


mirna_id: eca-mir-34c
hairpin:
     ag     A   A    A     C      C  a 
agucu  uuacu GGC GUGU GUUAG UGAUUG ua u
|||||  ||||| ||| |||| ||||| |||||| ||  
uuaga  aaugg ccg caca caauc acuaac au a
     aa     a   g    c     -      c  a 


mirna_id: eca-mir-492-2
hairpin:
AGGAG           GAU        ccacc 
     CUGCGGGACAA   UCUUgggg     a
     |||||||||||   ||||||||     u
     gacgucuuguu   agaaccuc     u
--cua           ---        aagag 


mirna_id: eca-mir-7-2
hairpin:
      g       U     A  A       U      u  ac 
ggucua ugcugug GGAAG CU GUGAUUU GUUGUu ug  g
|||||| ||||||| ||||| || ||||||| |||||| ||   
ucggau gcgacac ccuuc gg cacuaaa caacag au  u
      -       u     -  -       -      u  ca 


mirna_id: eca-mir-708
hairpin:
   aa        A           A     C  G gg  aa  a 
ggu  cugcccuc AGGAGCUUACA UCUAG UG G  ua  ug c
|||  |||||||| ||||||||||| ||||| || |  ||  || u
ccg  gacgggag ucuucgagugu agauc ac c  gu  ac u
   gg        a           c     a  g aa  ac  g 


mirna_id: eca-mir-1-1
hairpin:
u   c                     ac     ugaaca 
 acu agaguacauacuucuuuaugu  ccaua      u
 ||| |||||||||||||||||||||  |||||       
 ugg uuuUAUGUAUGAAGAAAUGUA  GGUau      a
-   u                     -A     cguaac 


mirna_id: eca-mir-122
hairpin:
      GG       C           --u  c 
agcugU  AGUGUGA AAUGGUGUUUG   gu c
||||||  ||||||| |||||||||||   ||  
ucgaua  ucacacu uuaccgcaaac   ca a
      aa       a           uau  a 


mirna_id: eca-mir-130b
hairpin:
      c    ca       cc         acugugg   gc 
ggccug cuga  cucuuuc  uguugcacu       gcu  u
|||||| ||||  |||||||  |||||||||       |||   
ccggac ggcU  GGGAAAG  GUAACGUGA       Cga  g
      u    AC       UA         -------   ag 


mirna_id: eca-mir-133a
hairpin:
    g       aa  u  a        gccuc 
gcua agcuggu  aa gg accaaauc     u
|||| |||||||  || || ||||||||      
cgau UCGACCA  UU CC UGGUUUag     u
    G       AC  C  C        guaac 


mirna_id: eca-mir-1597
hairpin:
u              c             ugug  u 
 uuuauuacgugcuu cagagcucuucau    gu u
 |||||||||||||| |||||||||||||    ||  
 aaauaAUGUACGAG GUCUCGAGGAGUa    cg c
a              C             -uaa  a 


mirna_id: eca-mir-187
hairpin:
ucg    a           - --c   -  cu 
   ggcu caacacgggac c   ggg cg  g
   |||| ||||||||||| |   ||| ||   
   CCGA GUUGUGUUCUG G   ccc gc  c
-GG    C           U CUc   a  cu 


mirna_id: eca-mir-301b
hairpin:
c    --u     -  g        G         ---      A  gug u 
 cucc   gcugg cc cagguGCU UGACGAUGU   UGCACU CU   c c
 ||||   ||||| || |||||||| |||||||||   |||||| ||   | u
 gggg   cgauc gg gucuaCGA ACUGUUAUA   ACGUGA ga   g g
-    uuc     a  -        A         GUA      C  --a a 


mirna_id: eca-mir-703
hairpin:
      CU   G AG     GA     u  u 
uAAAAC  UCA A  GAAAG  gaaug uu g
||||||  ||| |  |||||  ||||| ||  
auuuug  ggu u  uuuuu  uuuac ag u
      ac   g gu     gg     c  g 


mirna_id: eca-mir-1204
hairpin:
-   U  U   CU     C    A       a a 
 gcc CG GGC  GGUCC CACU Uuugaga g g
 ||| || |||  ||||| |||| ||||||| | u
 ugg gc ccg  ccagg gugg aggcucu c c
a   u  u   --     a    -       a a 


mirna_id: eca-mir-124-2
hairpin:
-        a   ga        uaau 
 guguucac gcg  ccuugauu    g
 |||||||| |||  ||||||||    u
 CGUAAGUG CGC  GGAAUuaa    c
C        G   AC        caua 


mirna_id: eca-mir-151
hairpin:
    c            CA          u ucu 
ccug ccUCGAGGAGCU  CAGUCUAGUa g   c
|||| ||||||||||||  |||||||||| |    
ggac ggaguuccucga  gucagaucau c   a
    a            -a          c ccu 


mirna_id: eca-mir-30b
hairpin:
U          U  -A        -ua u 
 GUAAACAUCC AC  CUCAGCUg   c a
 |||||||||| ||  ||||||||   | c
 cauuuguagg ug  gggucggu   g a
u          -  ga        uag u 


mirna_id: eca-mir-30d
hairpin:
u  g  U         CCC           gug  ac 
 gu gu GUAAACAUC   GACUGGAAGcu   ag  a
 || || |||||||||   |||||||||||   ||   
 ca cg cguuuguag   cugacuuucga   uc  u
-  g  u         --a           --a  gg 


mirna_id: eca-let-7e
hairpin:
  c   cU   G                U  ----g a  a 
cc ggg  GAG UAGGAGGUUGUAUAGU ga     g gg c
|| |||  ||| |||||||||||||||| ||     | ||  
gg ccc  uuc auccuccggcauauca cu     c cc a
  a   cu   g                -  agagg a  c 


mirna_id: eca-mir-125a
hairpin:
 ug  UC  UG   C    UA        ----  a 
c  gg  CC  AGA CCUU  ACCUGUGA    gg c
|  ||  ||  ||| ||||  ||||||||    ||  
g  CC  GG  UCU GGAG  UGGACAcu    cc a
 gu  GA  GU   U    --        ggga  u 


mirna_id: eca-mir-1302e-6
hairpin:
u              cacc    u    
 uuaguauaaguaua    ccca gca 
 ||||||||||||||    |||| || a
 AAUCAUAUUCAUAU    GGGU ugu 
A              ---A    U    


mirna_id: eca-mir-150
hairpin:
            ACC          -U    u 
cccugUCUCCCA   CUUGUACCAG  Gcug g
||||||||||||   ||||||||||  |||| c
gggacggggggu   ggacaugguc  uggc c
            -ac          cc    u 


mirna_id: eca-mir-330
hairpin:
      --    -    U   AG    uucaaa 
UCUCUG  GGCC UGUG CUU  GCuc      g
||||||  |||| |||| |||  ||||       
agagac  ccgg acac gaa  cgag      a
      gu    c    -   aa    ccaacu 


mirna_id: eca-mir-371
hairpin:
--       CU    G          g     
  ACUCAAA  GUGG GGCACUuucu ugcu 
  |||||||  |||| |||||||||| ||| a
  UGAGUUU  UACC CCGUGAAggg augc 
UG       UU    G          -     


mirna_id: eca-mir-769a
hairpin:
     cu   cG            U   G    g   cg 
gcccu  gcc  GAGACCUCUGGG UCU AGCU uga  u
|||||  |||  |||||||||||| ||| |||| |||  g
uggga  UGG  UUCUGGGGGCUC AGG UCga gcu  g
     cU   --            U   G    g   uc 


mirna_id: eca-mir-769b
hairpin:
        A   CU   UU UG        --  u          cu 
gcccGGAA CCU  GGG  C  AGCUguga  cg ggcuucugag  g
|||||||| |||  |||  |  ||||||||  || ||||||||||  g
cgggucuu ggg  cuc  g  uugguacu  gu cugggggcuc  g
        -   -u   ug gu        ug  u          ua 


mirna_id: eca-mir-10a
hairpin:
----aa  -   --c    uu        A    G     C          uaaggaa 
      ga ugu   uguc  cuguauaU CCCU UAGAU CGAAUUUGUG       u
      || |||   ||||  |||||||| |||| ||||| ||||||||||        
      cu aca   acag  gauguaua gggg aucua gcuuaaacac       u
acucgc  c   aau    uu        a    -     u          ugguguu 


mirna_id: eca-mir-1180
hairpin:
    g  u   c      -----           u  a 
gucu cc ggc caccca     gccgggaauag gc c
|||| || ||| ||||||     ||||||||||| ||  
cgga gg cUG GUGGGU     CGGCCUUUguu ug g
    -  -   U      GAGCU           -  a 


mirna_id: eca-mir-132
hairpin:
-  a a         uuc          -g     
 gg c accguggcu   gauuguuacu  uggg 
 || | |||||||||   ||||||||||  ||| a
 cc G UGGUACCGA   CUGACAAUgg  gcca 
c  - C         CAU          ag     


mirna_id: eca-mir-144
hairpin:
      g        a         -a    gc 
ggcugg auaucauc uauacugua  guuu  g
|||||| |||||||| |||||||||  ||||   
cugaUC UGUAGUAG AUAUGACAU  caga  a
      A        -         ca    gu 


mirna_id: eca-mir-193a
hairpin:
-   a             U     CG   G  A    ggu 
 ggg gcugagggcUGGG CUUUG  GGC AG UGAg   g
 ||| ||||||||||||| |||||  ||| || ||||    
 ccc cggcuucUGACCC GAAAC  CCG UC Acuu   u
g   c             U     AU   G  A    gac 


mirna_id: eca-mir-195
hairpin:
acaccca  uc     g  cU          -A         --   ggg 
       gc  cccug cu  AGCAGCACAG  AAUAUUGGC  acu   a
       ||  ||||| ||  ||||||||||  |||||||||  |||    
       ug  gggac ga  ucgucguguc  uuauaaccg  uga   a
-----ag  gu     g  cc          gg         uc   gag 


mirna_id: eca-mir-196a
hairpin:
      UA   A    C         - Gc u  a 
gugagu  GGU GUUU AUGUUGUUG G  c gg u
||||||  ||| |||| ||||||||| |  | ||  
cacuca  cca caaa uacagcaac c  g uc u
      gc   c    u         a aa -  u 


mirna_id: eca-mir-21
hairpin:
u     gU        A     A     A    u a 
 gucgg  AGCUUAUC GACUG UGUUG cugu g a
 |||||  |||||||| ||||| ||||| |||| | u
 caguc  ucggguag cugac acaac ggua c c
a     ug        -     g     -    - u 


mirna_id: eca-mir-212
hairpin:
--  u     cu      c      ccc     
  cc uggcu  agacug uuacug   gggc 
  || |||||  |||||| ||||||   ||| c
  GG ACUGA  UCUGAC AAUgac   cccg 
CC  C     CC      -      --u     


mirna_id: eca-mir-324
hairpin:
cu      gc     C   U C   A     U   U  aaag 
  gacuau  cuccc GCA C CCU GGGCA UGG GU    c
  ||||||  ||||| ||| | ||| ||||| ||| ||     
  cugaug  gggGG CGU G GGA CCCGU ACC ca    u
--      uu     U   C U   C     C   -  gagg 


mirna_id: eca-mir-338
hairpin:
      U   -         -   Ga  a 
cAACAA AUC CUGGUGCUG AGU  ug c
|||||| ||| ||||||||| |||  || a
GUUGUU UAG GACUACGAC Uca  gc c
      U   U         C   ac  a 


mirna_id: eca-mir-33b
hairpin:
G          UU         g   g 
 UGCAUUGCUG  GCAUUGCac ugu u
 ||||||||||  ||||||||| ||| g
 acgugacggc  cgugacgug gcg a
-          uc         g   g 


mirna_id: eca-mir-365-1
hairpin:
aaug     c   c       -----    u   u 
    aggga uuu aggggca     gcug guu u
    ||||| ||| |||||||     |||| |||  
    UUCCU AAA UCCCCGU     ugac cag c
-uUA     A   A       AAUac    u   u 


mirna_id: eca-mir-423
hairpin:
ag          -AG   G    A     cua 
  gcUGAGGGGC   AGA CGAG CUUUu   u
  ||||||||||   ||| |||| |||||   u
  UGACUCCCCG   UCU GCUC GAaaa   u
--          GAG   G    -     ccu 


mirna_id: eca-mir-451
hairpin:
c     a   u    gA                 U 
 uuggg aug cgag  AACCGUUACCAUUACUG G
 ||||| ||| ||||  |||||||||||||||||  
 gaccc ugu guuc  uuggcaaugguaaugau U
a     a   c    uc                 U 


mirna_id: eca-mir-454
hairpin:
          ---         cu     ----   u 
agaacccuau   cgauauugu  cugcu    gug a
||||||||||   |||||||||  |||||    ||| a
uuuUGGGAUA   GUUAUAACG  GAUga    cgc a
          UUC         -U     gucu   u 


mirna_id: eca-mir-497
hairpin:
C    G    C         U  --   ac 
 AGCA CACA UGUGGUUUG ac  ggc  u
 |||| |||| ||||||||| ||  |||   
 uugu gugu acaccaaac ug  ccg  g
-    g    c         c  ca   gu 


mirna_id: eca-mir-632
hairpin:
gugg  g           a   g    cgag   g 
    cu acgggaggcgg gca cgaa    ggc u
    || ||||||||||| ||| ||||    |||  
    GG UGUCCUUUGUC CGU Guuu    ccg c
---A  G           -   -    --ua   g 


mirna_id: eca-mir-129b
hairpin:
      -       C   CU      ---     acau 
gcgaau CUUUUUG GGU  GGGCUU   GCugu    a
|||||| ||||||| |||  ||||||   |||||     
cgcuUA GAAAAAC CCA  CCCGAA   cgaua    a
      C       C   UU      ggc     acuc 


mirna_id: eca-mir-130a
hairpin:
ga        c      ug  a   uc  ca 
  gcucuuuu acauug  cu cug  ug  c
  |||||||| ||||||  || |||  ||  c
  CGGGAAAA UGUAAC  GA gau  ac  u
UA        U      GU  C   -c  ca 


mirna_id: eca-mir-1902
hairpin:
--    -   ug  ga         a   aa      uua 
  guuu cuu  gg  guguuugcu uau  uuggau   u
  |||| |||  ||  ||||||||| |||  ||||||   a
  uaga gag  UC  UACGGAUGA GUG  GAuuug   c
aa    u   uU  AG         C   GA      uaa 


mirna_id: eca-mir-192
hairpin:
CU        -     A       ugcucu 
  GACCUAUG AAUUG CAGCCag      u
  |||||||| ||||| |||||||      g
  cuggauac uuaac gucgguc      u
-a        c     c       ucccuc 


mirna_id: eca-mir-194-1
hairpin:
-g       a    cU         A      G    agu   c 
  ggcuccc cccc  GUAACAGCA CUCCAU UGGA   gcc a
  ||||||| ||||  ||||||||| |||||| ||||   |||  
  ccggggg gggg  uauugucgu ggggug accu   ugg c
ga       c    uc         c      -    ---   u 


mirna_id: eca-mir-493a
hairpin:
     g      gc  g     a   -----   uaa 
ccugg augcag  ga uuagg gaa     auc   c
||||| ||||||  || ||||| |||     |||    
GGACC UGUGUC  CU GGUUC cuu     uag   a
     G      AU  G     -   auaaa   cua 


mirna_id: eca-mir-670
hairpin:
   uu     u   u      UC        U     - UG    ug au 
ggu  agggg gga cugacG  CCUGAGUG AUGUG G  AAcc  a  u
|||  ||||| ||| ||||||  |||||||| ||||| |  ||||  |  u
uca  ucccc cuu gacugu  ggacuuac uauac c  uugg  u  g
   cu     -   -      ga        u     u cu    gu cc 


mirna_id: eca-mir-675
hairpin:
            C    A      CC      -     
cccaggggcUGG GCGG GAGGGC  ACAGUG cacu 
|||||||||||| |||| ||||||  |||||| ||| c
ggguccccgacu cgcc cuuccg  ugucac guga 
            -    a      ua      a     


mirna_id: eca-mir-106b
hairpin:
UA       G       A -AUa    uc 
  AAGUGCU ACAGUGC G    gugg  c
  ||||||| ||||||| |    ||||   
  uucaugg ugucacg c    uacc  u
cg       g       c aucg    uc 


mirna_id: eca-mir-1302e-7
hairpin:
u                      u    
 uuuuuaguauagguauguccca gca 
 |||||||||||||||||||||| || a
 aaAAAUCAUAUUCAUAUAGGGU ugu 
a                      U    


mirna_id: eca-mir-1842
hairpin:
--UG      UG     G      g  ggg 
    GCUCUG  AGGUC GCUCAa gu   u
    ||||||  ||||| |||||| ||    
    cgggac  uccgg cgaguu ua   c
guug      ug     a      a  ggu 


mirna_id: eca-mir-193b
hairpin:
     u    gu    a    g  a  ag uua 
cagaa cggg  uuug gggc ag ug  u   u
||||| ||||  |||| |||| || ||  |   g
guuuU GCCC  AAAC CCCG UC Ac  a   u
     C    UG    A    G  A  cu uuu 


mirna_id: eca-mir-590
hairpin:
        a  G       U       G     ---   aa 
caaucaga ac AGCUUAU CAUAAAA UACAG   uau  u
|||||||| || ||||||| ||||||| |||||   |||   
guuagucu UG UCGAAUA GUAUUUU AUguc   aug  c
        c  A       U       A     caa   ac 


mirna_id: eca-mir-93
hairpin:
CA       -     U    G   u  g u 
  AAGUGCU GUUCG GCAG UAG gu a u
  ||||||| ||||| |||| ||| || | a
  uucacga cgagu cguc auc ca u c
cc       u     -    -   -  g c 


mirna_id: eca-mir-107a
hairpin:
c   cu     c gcuucuu           c   u g g 
 uca  gcccu g       uacagugcugc uug u c g
 |||  ||||| |       ||||||||||| ||| | |  
 AGU  CGGGA C       AUGUUACGACG Aac a g a
-   AU     - -------           -   u g u 


mirna_id: eca-mir-1271
hairpin:
-        CUC   A           a 
 CUUGGCAC   GUA GCACUCAguaa u
 ||||||||   ||| |||||||||||  
 ggaccgug   cgu cgugaguuguu a
c        ugu   c           c 


mirna_id: eca-mir-143
hairpin:
g  c   g         g      u  -  ag 
 cc gag ugcagugcu caucuc gg uc  u
 || ||| ||||||||| |||||| || ||   
 gg CUC AUGUCACGA GUAGAG cu ag  u
-  a   G         A      U  g  gg 


mirna_id: eca-mir-145
hairpin:
    c  UC    U  C            uagau 
cuca gG  CAGU UU CCAGGAAUCCCU     g
|||| ||  |||| || ||||||||||||     c
gagu uc  guca aa gguccuuagggg     u
    -  uu    u  a            uagaa 


mirna_id: eca-mir-146a
hairpin:
    uU            C        --g  u 
agcu  GAGAACUGAAUU CAUGGGUU   ug c
||||  |||||||||||| ||||||||   ||  
ucga  uucuugacuuga guguccag   gc a
    -c            a        acu  g 


mirna_id: eca-mir-218-2
hairpin:
-UU         CU        gguggcacga  g 
   GUGCUUGAU  AACCAUGU          ug a
   |||||||||  ||||||||          ||  
   cacgaacug  uugguaca          gc a
cgc         uc        --------ag  a 


mirna_id: eca-mir-340
hairpin:
          -CAA      U    g     ug 
ggUUAUAAAG    UGAGAC GAUU ucaug  u
||||||||||    |||||| |||| |||||  c
CCGAUAUUUC    ACUCUG CUag ggugu  g
          AUUG      C    -     uc 


mirna_id: eca-mir-874
hairpin:
g   c   a  ca        a   -a a 
 cgg ccc cg  ccagggua gag  g c
 ||| ||| ||  |||||||| |||  | u
 GCC GGG GC  GGUCCCGU cuu  c c
A   A   A  CC        C   cg u 


mirna_id: eca-mir-9a-2
hairpin:
--     g   UC               G      ug a 
  gaguu uua  UUUGGUUAUCUAGCU UAUGAg  u u
  ||||| |||  ||||||||||||||| ||||||  |  
  cucaa aau  aagccaauagaucga auacuu  g u
uc     a   ga               a      cu g 


mirna_id: eca-mir-1301
hairpin:
u   g gg        -     - c      -  gu 
 gug g  gucacucu aggca c gcagca cu  g
 ||| |  |||||||| ||||| | |||||| ||  c
 cac C  UAGUGAGG UCCGU G CGUUgu gg  u
a   a UU        G     C A      a  gg 


mirna_id: eca-mir-1461
hairpin:
      A       GU       u  uu 
AUCUCU CGGGUAA  GUGUGAu uc  u
|||||| |||||||  ||||||| ||   
uagaga guccguu  uacacua ag  a
      c       --       c  ug 


mirna_id: eca-mir-216a
hairpin:
         CU   A      -A   guu 
UAAUCUCAG  GGC ACUGUG  gau   c
|||||||||  ||| ||||||  |||    
auuaggguc  cug ugacac  cua   a
         -u   g      cc   aau 


mirna_id: eca-mir-216b
hairpin:
   g       gaA         A  --CAAA      g  ac 
gug cagacug   AAUCUCUGC GG      UGUGAu uc  u
||| |||||||   ||||||||| ||      |||||| ||   
uac gucugac   uuagagaug cc      acacua ag  a
   a       auc         c  auucac      a  aa 


mirna_id: eca-mir-217
hairpin:
UAC     C          U -   aag 
   UGCAU AGGAACUGAU G GAu   a
   ||||| |||||||||| | |||    
   acgua uccuugacua c cug   a
guu     a          c a   acu 


mirna_id: eca-let-7g
hairpin:
  a   U        A            ugagg    -a  a    a 
cc ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
|| ||| |||||||| ||||||||||||     ||||  || ||||  
gg ccg uuccguca cggacaugucaa     uaga  ac augg c
  a   -        c            -----    gg  -    c 


mirna_id: eca-mir-128-1
hairpin:
u ug       a          aug      ac    g gag 
 g  caguggg aggggggccg   cacugu  gaga u   u
 |  ||||||| ||||||||||   ||||||  |||| |    
 u  gucaucc UUUCUCUGGC   GUGACA  CUcu g   a
c gu       c          CAA      --    g acg 


mirna_id: eca-mir-1289
hairpin:
u     u     -u          uacc    aucuaa    uu  ac 
 uaaaa gugca  uucuuggacu    ccag      ucug  ga  u
 ||||| |||||  ||||||||||    ||||      ||||  ||  a
 auUUU UACGU  AAGGACCUGA    GGUc      agac  cu  a
a     -     CU          ----    ----gg    -u  aa 


mirna_id: eca-mir-135a
hairpin:
          UU            uucua 
cUAUGGCUUU  AUUCCUAUGUGA     c
||||||||||  ||||||||||||     u
ggugccgagg  uagggauauacu     g
          -u            cacuc 


mirna_id: eca-mir-138-2
hairpin:
AG             UCA       gc a 
  CUGGUGUUGUGAA   GGCCGuu  c a
  |||||||||||||   |||||||  | u
  gaccacaacacuu   ucggcaa  g c
-g             -ca       ga a 


mirna_id: eca-mir-191
hairpin:
      C          C  AA       uu  -  c 
agcggg AACGGAAUCC AA  GCAGCUG  gu cu c
|||||| |||||||||| ||  |||||||  || ||  
ucgucc uugcuuuagg uu  cgucgac  ua ga a
      c          -  cg       cu  c  g 


mirna_id: eca-mir-26a-2
hairpin:
   g  u   U         C          --g  ca 
gug cc cgU CAAGUAAUC AGGAUAGGCU   ug  g
||| || ||| ||||||||| ||||||||||   ||  g
cgc gg gca guucauugg ucuuauccgg   ac  u
   a  c   c         u          gua  cc 


mirna_id: eca-mir-711
hairpin:
    uaa         ca    g  a   gc 
acuu   gucucuuuu  gggu cc cag  a
||||   |||||||||  |||| || |||   
uGAA   CAGAGAGGG  CCCA GG guc  a
    -UG         -A    G  -   ga 


mirna_id: eca-mir-885
hairpin:
--   c     c           A  -         cu 
  ccg gcucu UCCAUUACACU CC CUGCCUCUu  c
  ||| ||||| ||||||||||| || |||||||||   
  ggc cgagA AGGUGAUGUGG GG GACGGAgag  c
ug   a     U           -  C         ua 


mirna_id: eca-mir-15a
hairpin:
UA        UA          ga  u 
  GCAGCACA  AUGGUUUGUG  uu u
  ||||||||  ||||||||||  || g
  cgucgugu  uaccggacgu  aa a
uc        ua          gg  a 


mirna_id: eca-mir-16-2
hairpin:
         -  A        C u   gauu 
UAGCAGCAC GU AAUAUUGG G uaa    c
||||||||| || |||||||| | |||     
gucgucgug ca uuaugacc c auu    u
         u  a        u u   aaaa 


mirna_id: eca-mir-17
hairpin:
CA        A  G     G   -  aua 
  AAGUGCUU CA UGCAG UAG ug   u
  |||||||| || ||||| ||| ||   a
  uucacgga gu acguc auc ac   u
ug        a  g     -   u  gug 


mirna_id: eca-mir-18a
hairpin:
U    U   UC   U    A   -  aa u 
 AAGG GCA  UAG GCAG UAG ug  g a
 |||| |||  ||| |||| ||| ||  | g
 uucc cgu  auc cguc auc ac  u a
c    u   ga   c    -   u  ga u 


mirna_id: eca-mir-19a
hairpin:
    u  u                 --      ---    ag 
gcag cu cuguuaguuuugcauag  uugcac   uaca  a
|||| || |||||||||||||||||  ||||||   ||||  a
cguc gg gguAGUCAAAACGUAUC  AACGUG   augu  g
    c  u                 UA      Uug    aa 


mirna_id: eca-mir-19b
hairpin:
g           -  -      uc    ugugu 
 uuaguuuugca gg uuugca  cagc     g
 ||||||||||| || ||||||  ||||     a
 AGUCAAAACGU CC AAACGU  GUcg     u
-           A  U      --    ucuug 


mirna_id: eca-mir-92a
hairpin:
            c   u           uu 
acagguugggau ggu gcaaugcugug  u
|||||||||||| ||| |||||||||||   
UGUCCGGCCCUG UCA CGUUAUgguau  c
            U   -           gu 


mirna_id: eca-mir-10b
hairpin:
     A    G     C          -ug  au 
uauaU CCCU UAGAA CGAAUUUGUG   gu  c
||||| |||| ||||| ||||||||||   ||   
auaua gggg aucuu gcuuagacac   ua  c
     a    -     a          uga  ca 


mirna_id: eca-mir-128-2
hairpin:
      uuc       uag      cu       u 
guugga   ggggccg   cacugu  gagaggu u
||||||   |||||||   ||||||  |||||||  
cgacuu   CUCUGGC   GUGACA  CUcuuua a
      UUU       CAA      --       c 


mirna_id: eca-mir-1248
hairpin:
-UC        AUAA C   G     ---AA                u 
   CUUCUUGU    G ACU UGCUA     auugcagaaacuagga c
   ||||||||    | ||| |||||     |||||||||||||||| a
   gaagaaca    c uga acgau     uaauguuuuugguucu c
aaa        --ca a   g     cguaa                u 


mirna_id: eca-mir-28
hairpin:
   c         A                U  ----    gcc 
ggu cuugcccuc AGGAGCUCACAGUCUA UG    AGuu   u
||| ||||||||| |||||||||||||||| ||    ||||    
uca ggacgggAG UCCUCGAGUGUUAGAU AC    ucag   u
   c         G                C  ccuu    ucu 


mirna_id: eca-mir-551b
hairpin:
a          cg     - -aga    gug 
 ugaaaucaag  ugggu g    ccug   c
 ||||||||||  ||||| |    ||||    
 ACUUUGGUUC  ACCCA C    gggc   a
G          AU     G Ggaa    aag 


mirna_id: eca-mir-568
hairpin:
        A         ACuucc        u 
AUGUAUAA UGUAUACAC      uauauaua c
|||||||| |||||||||      ||||||||  
uacauauu auauaugug      auauauau c
        -         ------        a 


mirna_id: eca-mir-1291b
hairpin:
A   -    AAUCA            ug 
 GGC CCUG     AGACCAGCAGUu  c
 ||| ||||     ||||||||||||   
 ccg ggac     uuugguugucgg  u
g   a    -gaac            ug 


mirna_id: eca-mir-133b
hairpin:
        ca  c  a      u  g      
uggcuggu  aa gg accaag cc ucuuc 
||||||||  || || |||||| || |||| c
AUCGACCA  UU CC UGGUUU gg agagu 
        AC  C  C      -  -      


mirna_id: eca-mir-206-2
hairpin:
-                     cc     -    u 
 aggccacaugcuucuuuauau  ccaua cgga u
 |||||||||||||||||||||  ||||| ||||  
 uuuGGUGUGUGAAGGAAUGUA  GGUau guuu a
c                     -A     c    c 


mirna_id: eca-mir-219-1
hairpin:
    c       uU   U     A  G         a   ucu 
gggc gcggcuc  GAU GUCCA AC CAAUUCUcg guc   g
|||| |||||||  ||| ||||| || ||||||||| |||   g
cccg cgccgag  cug caggu ug guugagagc cgg   c
    c       cc   -     c  a         -   ccu 


mirna_id: eca-mir-30c-2
hairpin:
U       U   ACA         guggaa 
 GUAAACA CCU   CUCUCAGCu      a
 ||||||| |||   |||||||||       
 cauuugu gga   gagggucga      g
u       c   --a         aagagu 


mirna_id: eca-mir-1898
hairpin:
          UC     GG  -      au 
AGGUCAAGGU  ACAGG  AU Caagaa  a
||||||||||  |||||  || ||||||   
uccaguuuca  ugucu  ua guucuu  u
          uu     aa  u      au 


mirna_id: eca-mir-449a
hairpin:
       GUA            uga  au 
UGGCAGU   UUGUUAGCUGGU   au  a
|||||||   ||||||||||||   ||   
aucguca   aacaaucgacua   ua  u
       acg            cgg  ag 


mirna_id: eca-mir-582
hairpin:
-uuu    A             A     Uaaucu 
    ggUU CAGUUGUUCAACC GUUAC      a
    |||| ||||||||||||| |||||       
    CCAA GUCAACAAGUUGG CAAUg      a
aaac    -             C     uuaauc 


mirna_id: eca-mir-1-2
hairpin:
g    gg a                gc     ---   a 
 cuug  a acauacuucuuuauau  ccaua   ugg c
 ||||  | ||||||||||||||||  |||||   ||| c
 ggac  U UGUAUGAAGAAAUGUA  GGUau   auc u
-    uu A                -A     cga   g 


mirna_id: eca-mir-103
hairpin:
uc  g      --   u  u           ----    ua 
  gu cuuuca  gcu cu uacagugcugc    cuug  g
  || ||||||  ||| || |||||||||||    ||||  c
  ca gaaAGU  CGG GA AUGUUACGACG    ggac  a
ac  a      AU   -  C           Aacu    uu 


mirna_id: eca-mir-1255b
hairpin:
--     -  AAG  AA AA          uu 
  uaCGG AU   CA  G  AGUGGUUucu  a
  ||||| ||   ||  |  ||||||||||   
  guguc ua   gu  u  ucaucaaagg  a
aa     g  gaa  gg cc          ua 


mirna_id: eca-mir-133a-2
hairpin:
    a       aa  u  a        aacug 
gcua agcuggu  aa gg accaaauc     u
|||| |||||||  || || ||||||||      
cgau UCGACCA  UU CC UGGUUUag     u
    G       AC  C  C        guaac 


mirna_id: eca-mir-296
hairpin:
a   cu    c        c  -         g   ugu 
 gga  cuuc ggagggcc cc cccaauccu uug   u
 |||  |||| |||||||| || ||||||||| |||   u
 ucu  gaag CCUUUCGG GG GGGUUGGGA Gac   g
-   cg    u        A  U         -   uua 


mirna_id: eca-mir-499
hairpin:
u uu      ccu   c c    --    c   u  UA        A          acucc 
 g  cugucc   gca c uggg  cggg ggc gU  AGACUUGC GUGAUGUUUa     u
 |  ||||||   ||| | ||||  |||| ||| ||  |||||||| ||||||||||     c
 u  gacggg   cgu g accc  gccc ucg CG  UCUGAACG CACUACAAgu     u
- gg      -uc   c u    cu    u   U  UG        A          gcacc 


mirna_id: eca-let-7d
hairpin:
       A              C      -------uua      g 
ccuagga GAGGUAGUAGGUUG AUAGUU          gggcag g
||||||| |||||||||||||| ||||||          |||||| a
ggauucu uuccgucguccagc uaucaa          cccguu u
       -              a      uagaggaaca      u 


mirna_id: eca-let-7f
hairpin:
    a UG                      ---------       u 
ucgg g  AGGUAGUAGAUUGUAUAGUUgu         gggguag g
|||| |  ||||||||||||||||||||||         ||||||| a
aguc c  uccguuaucuaacauaucaaua         ucccauu u
    - cu                      gaggacuug       u 


mirna_id: eca-mir-101-2
hairpin:
--  -                    c a    guaua 
  cc uuuuucgguuaucaugguac g ugcu     u
  || |||||||||||||||||||| | ||||      
  gg aagAAGUCAAUAGUGUCAUG C AUgg     c
gu  u                    A -    aaagu 


mirna_id: eca-mir-204b-2
hairpin:
u    U          A     U    gagaau 
 ggac UCCCUUUGUC UCCUA GCCU      a
 |||| |||||||||| ||||| ||||      u
 cuug agggaaacgg agggu cgga      a
a    c          a     -    ggaagu 


mirna_id: eca-mir-23b
hairpin:
  c   u   --          -  c      gugacu 
gg ugc ugg  guuccuggca ug ugauuu      u
|| ||| |||  |||||||||| || ||||||       
cc acg aCC  UAGGGACCGU AC ACUAaa      a
  a   c   AU          U  -      auuaga 


mirna_id: eca-mir-24-2
hairpin:
    g  g   a         ua     ucuca 
cucc gu ccu cugagcuga  ucagu     u
|||| || ||| |||||||||  |||||     u
gagG CA GGA GACUUGACU  GGUca     u
    A  A   C         -C     cacau 


mirna_id: eca-mir-27b
hairpin:
                  auug        ugac     
aggugcagagcuuagcug    gugaacag    uggu 
||||||||||||||||||    ||||||||    ||| u
uccaCGUCUUGAAUCGGU    CACUUguu    gccu 
                  --GA        --uc     


mirna_id: eca-mir-31
hairpin:
ggaga   -     G   C         -U   gaa 
     ggA GGCAA AUG UGGCAUAGC  guu   c
     ||| ||||| ||| |||||||||  |||    
     ucu ccguu uac accguaucg  caa   u
-----   a     a   a         uc   gag 


mirna_id: eca-mir-491
hairpin:
 ug      cu      U      CC   C          a 
u  acuuag  ggguAG GGGGAA  CUU CAUGAGGagu g
|  ||||||  |||||| ||||||  ||| |||||||||| a
g  uggguc  ucCAUC UCCCUU  GAA GUAUUCcuca a
 gu      ag      U      -A   C          c 


mirna_id: eca-mir-544b
hairpin:
ggcau          -c     --     -a    --g  g 
     cuuguuaaaa  gcaga  cuugg  uuca   ca g
     ||||||||||  |||||  |||||  ||||   ||  
     GAACAAUUUU  CGUCU  gaacc  gagu   gu u
--CUU          UA     UA     cg    agg  c 


mirna_id: eca-mir-7-3
hairpin:
uggucua  u        A     A       U      --ug   a 
       gu cugugUGG AGACU GUGAUUU GUUGUu    uag u
       || |||||||| ||||| ||||||| ||||||    |||  
       ca gguauacc ucuga cacuaaa caacag    auc a
----gga  c        g     -       -      cuaa   a 


mirna_id: eca-mir-872
hairpin:
--u   u     A        U  -U        accucgu 
   acu guuag AGGUUACU GU  AGUUCAGG       u
   ||| ||||| |||||||| ||  ||||||||        
   ugg caauc uccgauga cg  ucaagucc       a
cuc   u     c        -  uu        guucuuu 


mirna_id: eca-mir-873
hairpin:
--   u ca   G A      UG G        a  ga 
  gug g  uuu C GGAACU  U AGUCUCCU uu  a
  ||| |  ||| | ||||||  | |||||||| ||  a
  cac c  aag g ccuuga  a ucagagga aa  a
aa   c ac   g c      gu g        c  gu 


mirna_id: eca-mir-876
hairpin:
u    ug         U                aucuga  u 
 gaag  cugUGGAUU CUUUGUGAAUCACCAu      gc a
 ||||  ||||||||| ||||||||||||||||      ||  
 cuuc  gauACUUAA GAAACAUUUGGUGGUG      Ug a
a    gu         U                -----G  u 


mirna_id: eca-mir-1185
hairpin:
u       u    -     GA A              acu   u 
 uugguac ugaa gAGAG  U CCCUUUGUAUGUUc   uca u
 ||||||| |||| |||||  | ||||||||||||||   |||  
 aacuaug guuu uucuc  a gggggacauauaag   agu a
a       c    a     ag -              --c   a 


mirna_id: eca-mir-1193
hairpin:
ugaagggacuguagugccauccacucugca    a     gg       -    c      g    cu   u 
                              gggu gcuga  ggauggu agac ggugac ugca  uca u
                              |||| |||||  ||||||| |||| |||||| ||||  |||  
                              ccca cgacu  cCUAUCA UUUG CCACUG AUgu  agu u
--------------------gucuaccuga    -     -a       G    C      G    --   a 


mirna_id: eca-mir-1197
hairpin:
gggagagaggcugggucagcgucacuuca       u  a  u c   u       c  - g    - uuu 
                             ugguauu ga ga g ggu gaccaug ug u uacg c   a
                             ||||||| || || | ||| ||||||| || | |||| |   u
                             acuauaa cu cU C UCA CUGGUAC AC G AUgc g   u
--------------------ccgcucuac       -  c  - U   U       -  A G    a uau 


mirna_id: eca-mir-127
hairpin:
----      ugcug         g  c      --  a 
    ccagcc     aagcucaga gg ucugau  uc g
    ||||||     ||||||||| || ||||||  || a
    ggUCGG     UUCGAGUCU CC AGGCUa  ag a
ggcu      -----         G  U      cu  a 


mirna_id: eca-mir-134
hairpin:
     gU        U  -A   G    Gca   a 
agggu  GUGACUGG UG  CCA AGGG   agc c
|||||  |||||||| ||  ||| ||||   ||| u
uccca  cacugauc ac  ggu uccc   uug c
     ac        c  cg   g    -ac   u 


mirna_id: eca-mir-136
hairpin:
        C     UUU          uuc 
gaggACUC AUUUG   UGAUGAUGGa   u
|||||||| |||||   ||||||||||   u
cuucugag uaaac   gcuacuaccu   a
        -     ucu          cgc 


mirna_id: eca-mir-154
hairpin:
--        UAU      UGCC    - uuu 
  agaUAGGU   CCGUGU    UUCG c   a
  ||||||||   ||||||    |||| |   u
  uuuaucca   ggcaca    aagc g   c
uu        cuu      uacu    a ugu 


mirna_id: eca-mir-299
hairpin:
     a                      uu 
aagaa ugguuuaccgucccacauacau  u
||||| ||||||||||||||||||||||  g
uucUU GCCAAAUGGUAGGGUGUAUgua  a
     C                      ug 


mirna_id: eca-mir-329
hairpin:
guguuaaucag      cu           uu      uuc      uuuaa 
           ugguac  gaagagagguu  cugggu   uguuuc     u
           ||||||  |||||||||||  ||||||   ||||||      
           acuaug  cuUUUCUCCAA  GAUCCA   ACAAag     g
------ccuag      ac           UU      --C      uagaa 


mirna_id: eca-mir-337
hairpin:
guagucaguag    -        -  C   U  A  C        augcg 
           gugg ggggugaG AA GGC UC UA AGGAGCUg     c
           |||| |||||||| || ||| || || ||||||||     a
           cacu ccccaCUC UU CCG AG GU UCCUCgac     g
-----------    u        C  U   U  A  A        ccauu 


mirna_id: eca-mir-342
hairpin:
gaaccu    u        G      --UA      AUUGA      ugg a 
      gggc caaggugA GGGUGC    UCUGUG     Gggaca   c a
      |||| |||||||| ||||||    ||||||     ||||||   | a
      cccg guuccacU CCCACG    AGACAC     CUCUgu   g u
-auccg    -        G      CUAA      ----A      uaa a 


mirna_id: eca-mir-345
hairpin:
--------acc   c         G U          C   U     ugau 
           caa cccaggucu C GACUCCUAGU CAG GCUCg    g
           ||| ||||||||| | |||||||||| ||| |||||     
           guu gggucCGGA G CUGGGGAUCA GUC cgggu    g
gaccgcuauaa   u         G U          A   C     gauc 


mirna_id: eca-mir-369
hairpin:
u   ag               CA      Cuuua 
 uga  ggAGAUCGACCGUGU  UAUUCG     u
 |||  |||||||||||||||  ||||||      
 gcu  UUUCUAGUUGGUACA  AUAAgc     u
g   cu               UA      uucag 


mirna_id: eca-mir-370
hairpin:
agac   g         ca gu   u    u   a  g 
    aga aggccaggu  c  cuc gcag uac ca c
    ||| |||||||||  |  ||| |||| ||| || u
    ucu ucUGGUCCA  G  GGG CGUC Gug gu c
----   g         AG UG   U    C   a  a 


mirna_id: eca-mir-376a
hairpin:
u    g  a    c    u      guacaaua 
 aaaa gu gauu uccu cuauga        u
 |||| || |||| |||| ||||||        u
 uuuU CA CUAA AGGA GAUACU        u
c    G  C    A    -      Aauuagua 


mirna_id: eca-mir-376b
hairpin:
u      u    g      a     u     u   - guga 
 gguauu aaaa guggau uuccu cuaug uua c    u
 |||||| |||| |||||| ||||| ||||| ||| |     
 cuauga uuuU UACCUA AAGGA GAUAC Aau g    u
a      c    G      A     -     U   a auac 


mirna_id: eca-mir-376c
hairpin:
    g     ua     u         uguug 
aaaa gugga  uuccu cuauguuua     u
|||| |||||  ||||| |||||||||     u
uuuU CACCU  AAGGA GAUACAAau     u
    G     UA     -         uggua 


mirna_id: eca-mir-379
hairpin:
    a    A       GA       - uuuau 
agag UGGU GACUAUG  ACGUAGG c     g
|||| |||| |||||||  ||||||| |      
ucuc auca cugguac  uguaucc g     a
    a    c       aa       a uuuuu 


mirna_id: eca-mir-380
hairpin:
      guu       ga       -  gu 
aagacg   gaccaua  gcaugcg cu  c
||||||   |||||||  ||||||| ||  u
UUCUGC   CUGGUAU  UGUAUgc gg  c
      -AC       AA       u  au 


mirna_id: eca-mir-410
hairpin:
------      g    ug      a  a     - uuu 
      ugagga aggu  ucugug ug guucg c   a
      |||||| ||||  |||||| || ||||| |   u
      acuucU UCCG  AGACAC AU UAAgc g   u
accaug      G    GU      A  A     a uaa 


mirna_id: eca-mir-412
hairpin:
      a   g  a    c      u   aa    -    u 
ggguac gga gg uggu gaccag ugg  agua auug u
|||||| ||| || |||| |||||| |||  |||| ||||  
cccaug ccu CC AUCA CUGGUC ACU  Ucau uaau u
      -   G  G    C      C   --    g    c 


mirna_id: eca-mir-431
hairpin:
---    c       U          C  U A     ----   aca 
   cguc ugcgagg GUCUUGCAGG CG C UGCAG    Gcc   c
   |||| ||||||| |||||||||| || | |||||    |||    
   gcag acgcucu cgggacguuc gc g acguu    ugg   u
aca    a       u          u  u g     gcaa   cag 


mirna_id: eca-mir-432
hairpin:
ugcgugacuccu     U U     UA       G     a   uu   uu 
            ccagg C UGGAG  GGUCAUU GGUGG ucc  uau  c
            ||||| | |||||  ||||||| ||||| |||  |||   
            gguuc g accuc  ucgguag ucacc ggg  gua  c
------------     u u     -c       g     -   -u   uc 


mirna_id: eca-mir-433
hairpin:
------------------------ugcccgg      gua   u           u   --------  g     cu 
                               ggagaa   cgg gagccugucau auu        ca agagg  a
                               ||||||   ||| ||||||||||| |||        || |||||   
                               ccucuU   GCU CUCGGGUAGUA UAg        gu ucucc  g
cccgacggaaguaccacaccacggcgaugga      GUG   C           C   gaagaauu  g     ua 


mirna_id: eca-mir-485
hairpin:
   u         CU       -    A    auuc 
acu gaagAGAGG  GGCCGUG AUGA UUCg    a
||| |||||||||  ||||||| |||| ||||    u
uga uuUCUCUCC  UCGGCAC UACU Gagc    c
   u         UC       A    -    gaaa 


mirna_id: eca-mir-487a
hairpin:
      u     g   uua      c    -    cu  a 
gguacu gaaga ugg   ucccug ugug uucg  gu u
|||||| ||||| |||   |||||| |||| ||||  ||  
cuauga uuuUU ACC   AGGGAC AUAC AAgc  ua u
      c     G   UAC      -    U    ag  u 


mirna_id: eca-mir-487b
hairpin:
u       ug        uuau      c u     uuuua 
 ugguacu  gagagugg    cccugu c guucg     a
 |||||||  ||||||||    |||||| | |||||      
 acuauga  uuUUCACC    GGGACA G UAAgc     u
a       cu        UACU      U C     ugcau 


mirna_id: eca-mir-493b
hairpin:
     cuc        u        u           cauuc  u 
cuggc   cagggccu guacaugg aggcuuucauu     gu u
|||||   |||||||| |||||||| |||||||||||     ||  
gaccg   gucucGGA CGUGUGCC UCUGGAAGUgg     ca g
     --u        C        U           -cuua  c 


mirna_id: eca-mir-495
hairpin:
u   c  u          u  -       au     - uug 
 ggu cc gaaaagaagu gc ccauguu  uuucg c   a
 ||| || |||||||||| || |||||||  ||||| |   u
 cua gg uuuUUCUUCA CG GGUACAA  AAAgc g   a
a   u  c          -  U       AC     a ugu 


mirna_id: eca-mir-496
hairpin:
a   ---u  --cca      c   u        u     gu         uua 
 ccc    ag     gguacu gaa ggagguug ccaug  guguucauu   u
 |||    ||     |||||| ||| |||||||| |||||  |||||||||    
 ggg    uc     ucauga cuu cCUCUAAC GGUAC  UAUGAGUag   u
-   uucu  uuaaa      -   u        C     AU         uau 


mirna_id: eca-mir-539
hairpin:
     ug          A      C    ----U    uu 
auacu  aGGAGAAAUU UCCUUG UGUG     ucgc  u
|||||  |||||||||| |||||| ||||     ||||  a
uauga  uuuucuuuaa aggaac auac     agug  u
     gu          c      -    uaagu    uu 


mirna_id: eca-mir-541
hairpin:
-   -u      aa        c    g uc    u   gaguu 
 acg  caggga  ggauucug uguc g  ccac cca     c
 |||  ||||||  |||||||| |||| |  |||| |||      
 ugu  gucUCU  CCUAAGAC ACGG U  GGUg ggu     g
g   uc      GA        -    G --    -   aaaac 


mirna_id: eca-mir-543
hairpin:
  u          u  -     ---u    u    uu 
cu aaggagaagu gc ccgug    uuuu ucgc  u
|| |||||||||| || |||||    |||| ||||  a
ga uuuUUCUUCA CG GGCGC    AAAg agug  u
  c          -  U     UUAC    c    uu 


mirna_id: eca-mir-544-2
hairpin:
auuuu      cua    u           -     u   -ga  c 
     caucac   ggga cuuguuaaaag gcaga ucu   uu a
     ||||||   |||| ||||||||||| ||||| |||   ||  
     guagug   ccCU GAACGAUUUUU CGUCU Aga   ag g
-aauc      -aa    U           A     U   acc  g 


mirna_id: eca-mir-655
hairpin:
aacu   caag      ug           u      ua      cuuca 
    guu    gauauu  aggagagguua ccgugu  uguucg     u
    |||    ||||||  ||||||||||| ||||||  ||||||      
    cag    cuauaa  uUUUCUCCAAU GGUACA  AUAagu     u
--cu   ---a      gu           U      UA      acuac 


mirna_id: eca-mir-656
hairpin:
---------- u    u      c     ag       cuu  u 
          c gaaa agguug cugug  guguuca   uc a
          | |||| |||||| |||||  |||||||   || u
          g cuuU UCCAAC GACAU  UAUAAgu   ag a
cuaagcuaag c    C      U     AU       ---  c 


mirna_id: eca-mir-758
hairpin:
gcc       a    --a    u      aga   c   - uuu 
   uggguac ugag   uggu gaccag   gca acg c   a
   ||||||| ||||   |||| ||||||   ||| ||| |   u
   aucuaug acuc   AUCA CUGGUC   UGU Ugc g   u
--a       -    CCA    C      CAG   U   c ugu 


mirna_id: eca-mir-770
hairpin:
---  --c     u  gu                GUC      -      gc 
   gc   gcccu cc  gccuccAGCACCACGU   UGGGCC AUGuga  a
   ||   ||||| ||  ||||||||||||||||   |||||| ||||||   
   cg   cggga gg  cgggggucguggugua   gcccgg uacacu  a
ucu  ucu     c  --                ---      g      gg 


mirna_id: eca-mir-889
hairpin:
-     u   g     c      uagua     u    a 
 gugcu aaa aaugg ugucug     ugguc ccau u
 ||||| ||| ||||| ||||||     ||||| ||||  
 uauga uuU UUACC ACAGGC     AUUag ggua u
c     u   G     A      -UAUA     u    c 


mirna_id: eca-mir-126
hairpin:
      - a           U       C cug   c 
cgacgg g CAUUAUUACUU UGGUACG G   uga a
|||||| | ||||||||||| ||||||| |   |||  
gcugcc C GUAAUAAUGAG GCCAUGC c   acu c
      G -           U       U -aa   u 


mirna_id: eca-mir-181a
hairpin:
aagggcugccaggacccagccuuca             A   U      CU       A    ggga 
                         gaggacuccaagg ACA UCAACG  GUCGGUG GUuu    u
                         ||||||||||||| ||| ||||||  ||||||| ||||    u
                         uuccugggguucc ugu aguugc  cagccac caaa    u
------------------------a             a   c      --       -    aaag 


mirna_id: eca-mir-199b
hairpin:
     C       U       U    U  ----  a 
gucua CCAGUGU UAGACUA CUGU Ca    gg c
||||| ||||||| ||||||| |||| ||    ||  
cggAU GGUUACA GUCUGAU GACA gu    cc u
     U       C       -    u  uaaa  c 


mirna_id: eca-mir-219-2
hairpin:
a   a       c     U   U     AA           uac a  c 
 cuc ggggcuu gccac GAU GUCCA  CGCAAUUCUug   g gu u
 ||| ||||||| ||||| ||| |||||  |||||||||||   | || g
 ggg ccucgag cggug cua caggu  guguuaagagc   c cg c
-   -       u     u   -     cg           caa -  g 


mirna_id: eca-mir-32
hairpin:
        UG     U            - uu  c 
ggagaUAU  CACAU ACUAAGUUGCAc g  gu a
||||||||  ||||| |||||||||||| |  ||  
cuuuuaua  gugug ugauuuaacgug c  cg c
        gu     -            a uc  g 


mirna_id: eca-let-7c
hairpin:
-  uU   G   U             ua  g ua a 
 gg  GAG UAG AGGUUGUAUGGUU  ga u  c c
 ||  ||| ||| |||||||||||||  || |  | c
 cc  uuc auc uccaacaugucaa  uu a  g c
u  -u   g   u             --  g gg u 


mirna_id: eca-mir-125b-2
hairpin:
-     UC  UG   C   A        -gg   u 
 ccuag  CC  AGA CCU ACUUGUGA   uau u
 |||||  ||  ||| ||| ||||||||   |||  
 ggauc  gg  ucu gga ugaacacu   aug u
c     ca  gu   c   c        aca   g 


mirna_id: eca-mir-155
hairpin:
             U    A        uuua c 
cugUUAAUGCUAA CGUG UAGGGGUu    c u
||||||||||||| |||| ||||||||    |  
gacaauuacgauu guac auccucag    g c
             -    -        -uca g 


mirna_id: eca-mir-802
hairpin:
----uu      u     auC   A          A       -  cc 
      cuauua uugca   AGU ACAAAGAUUC UCCUUGU gu  a
      |||||| |||||   ||| |||||||||| ||||||| ||  u
      gauaau aaugu   uca uguuucuaag aggaaca cg  c
cgcguc      u     gau   c          -       a  aa 


mirna_id: eca-mir-99a-2
hairpin:
cc          A         UC   U       u aag 
  cauuggcaua ACCCGUAGA  CGA CUUGUGg g   u
  |||||||||| |||||||||  ||| ||||||| |    
  gugacugugu uggguaucu  gcu gaacacu c   g
gu          c         uc   c       - cag 


mirna_id: eca-mir-486
hairpin:
gg                      ----   c uu 
  aUCCUGUACUGAGCUGCCCCGA    Ggc c  c
  ||||||||||||||||||||||    ||| |   
  UAGGACAUGACUCGACGGGGCu    ccg g  a
--                      cgac   u uc 


mirna_id: eca-let-7a-2
hairpin:
   U   GU               Uuggggcuc      g 
ggg GAG  AGUAGGUUGUAUAGU         ugcccu c
||| |||  |||||||||||||||         |||||| u
ucc uuc  ucaucuaacauauca         augggg a
   u   ug               ---------      u 


mirna_id: eca-mir-331
hairpin:
gaauuugguuuu         u        u    u       au ccaga 
            guuuggguu guucuagg augg cccaggg  c     u
            ||||||||| |||||||| |||| |||||||  |     c
            caaauccaa cAAGAUCC UAUC GGGUCCC  g     a
------------         c        -    C       CG accaa 


mirna_id: eca-mir-33a
hairpin:
              A UU          uucu  c 
cugugGUGCAUUGU G  GCAUUGCAug    gg g
|||||||||||||| |  ||||||||||    || g
gacacuacgugaca c  uguaacguac    cc u
              c uu          ----  a 


mirna_id: eca-mir-181a-2
hairpin:
-u   ucu      u   ----u   u A   U      CU       A    g  au 
  gag   gagggu gcu     cag g ACA UCAACG  GUCGGUG GUuu ga  u
  |||   |||||| |||     ||| | ||| ||||||  ||||||| |||| ||  a
  cuc   cuccua cga     guc c ugu aguugc  cagcuac caaa cu  a
ac   -cu      c   ucggu   c g   u      --       -    a  aa 


mirna_id: eca-mir-194-2
hairpin:
a   - gu       U         A      G    --c     
 ugg g  caucaag GUAACAGCA CUCCAU UGGA   uggg 
 ||| |  ||||||| ||||||||| |||||| ||||   ||| u
 acc u  guaguuu cauugucgu gaggug accu   acca 
a   a ug       u         a      -    uua     


mirna_id: eca-mir-215
hairpin:
aucauua  aaau           a A  A     -   U          uaug 
       ag    gguauacagga a UG CCUAU GAA UGACAGACaa    a
       ||    ||||||||||| | || ||||| ||| ||||||||||    c
       uc    cuauaugucuu u ac ggaug cuu acugucuguu    u
aacuuca  gucu           a a  c     u   u          ugaa 


mirna_id: eca-mir-350
hairpin:
aaacccuuug      u         -   cac c      -     gugag 
          cuccua aagaguaaa gug   g gcuuug ggaca     g
          |||||| ||||||||| |||   | |||||| |||||     a
          gaggau uucuCAUUU CAC   C CGAAAC CUUgu     a
--------ga      -         U   AUA C      A     aguag 


mirna_id: eca-mir-664
hairpin:
gaacauugaaac         aaac   u        aaa 
            aggcuagga    uga uggauaga   u
            |||||||||    ||| ||||||||   a
            UCCGAUCCU    AUU ACUUAUcu   u
-------aaACA         --CU   U        cau 


mirna_id: eca-mir-105
hairpin:
ugu         U  A          UC        gccg 
   gcaucguag CA AUGCUCAGAC  CUGUGGUg    u
   ||||||||| || ||||||||||  ||||||||     
   ugugguauc gu uacgaguuug  ggcaccac    u
auc         -  g          ua        guac 


mirna_id: eca-mir-106a
hairpin:
  u   cc    -CA        A  G     G   c  u 
cc ugg  augu   AAGUGCUU CA UGCAG UAG uu c
|| |||  ||||   |||||||| || ||||| ||| || u
gg acc  uaca   uucacgaa gu acguc auc ag g
  u   au    uuc        c  a     -   u  a 


mirna_id: eca-mir-1264
hairpin:
--------    c     -    u        aaagaa 
        aggu cucaa uaag auuuguug      u
        |||| ||||| |||| ||||||||      a
        UCCA GAGUU AUUC UGAACaac      a
guguaUUG    C     U    -        caagua 


mirna_id: eca-mir-1298
hairpin:
---aag         u         U    C             ------       cc 
      augaggagu aagagUUCA UCGG UGUCCAGAUGUAu      ccaagua  c
      ||||||||| ||||||||| |||| |||||||||||||      |||||||   
      uacuuuucg uuuucaagu aguc acgggucuacaua      gguuuau  a
acucag         c         u    a             aauaac       ug 


mirna_id: eca-mir-1468
hairpin:
        gu  C         C           ---  -u  u 
ggugggug  uu UCCGUUUGC UGUUUUGCUGa   ug  uc u
||||||||  || ||||||||| |||||||||||   ||  ||  
cuaccuac  aa agguaaacg auaaaacgacu   ac  ag u
        uu  a         a           cuu  uu  u 


mirna_id: eca-mir-188
hairpin:
   ca  UC         GU      -ugag u 
ucu  CA  CCUUGCAUG  GGAGGG     c u
|||  ||  |||||||||  ||||||     | u
agg  GU  GGGACGUAC  CCUCcc     g c
   AC  UU         AC      caaaa u 


mirna_id: eca-mir-18b
hairpin:
UA   U    C   U     UA  --g     
  AGG GCAU UAG GCAGU  Gu   aagc 
  ||| |||| ||| |||||  ||   ||| a
  ucc cgua auc cguca  ua   uucg 
--   c    a   c     uc  aga     


mirna_id: eca-mir-1912
hairpin:
---     gg    g u         gg   u    auuu 
   cucua  augu c cauugcaug  cug guau    u
   |||||  |||| | |||||||||  ||| ||||    u
   gagau  uacA G GUGACGUGC  GAC CAUa    a
uua     aa    A U         GA   C    acuu 


mirna_id: eca-mir-19b-2
hairpin:
acacugcuac                 -  -      uuu    g      u 
          uuacgauuaguuuugca gg uuugca   cagc uauaua g
          ||||||||||||||||| || ||||||   |||| ||||||  
          aguguuAGUCAAAACGU CC AAACGU   GUcg guauau u
----uguaau                 A  U      ---    -      a 


mirna_id: eca-mir-20b
hairpin:
     -CA           G     G   uuuu gc 
aguac   AAGUGCUCAUA UGCAG UAG    g  a
|||||   ||||||||||| ||||| |||    |   
ucaug   uucacgggugu auguc auc    c  u
     acc           g     -   ---u au 


mirna_id: eca-mir-221
hairpin:
-----ccaaca       cugg   a    -  ug   u         auuu    -   u 
           uccaggu    ggc ugaa cc  gca acaauguag    cugu guu c
           |||||||    ||| |||| ||  ||| |||||||||    |||| ||| u
           aggucca    ucg aCUU GG  CGU UGUUACAUC    GAca cgg u
cucuuguacaa       ----   g    U  GU   C         ----    a   g 


mirna_id: eca-mir-222
hairpin:
gcu      aagugu    a  c   au              -     auc   ucuu 
   gcugga      aggu cc uca  ggcucaguagccag uguag   cug    u
   ||||||      |||| || |||  |||||||||||||| |||||   |||    u
   cgaucu      ucua gg agu  cUGGGUCAUCGGUC ACAUC   gac    g
--u      ------    c  u   cu              U     GAc   uaau 


mirna_id: eca-mir-223
hairpin:
gcccagccuccu   -     a    cc u              gaguug       cau 
            gca gugcc cgcu  g guauuugacaagcu      gacacuc   g
            ||| ||||| ||||  | ||||||||||||||      |||||||   u
            cgu cacgg guga  C CAUAAACUGUUUGA      CUGUgag   g
------------   a     c    AC C              ------       aug 


mirna_id: eca-mir-224
hairpin:
       CA         U   U      a u   ug  u 
gggcuuu  AGUCACUAG GGU CCGUUu g aga  gu g
|||||||  ||||||||| ||| |||||| | |||  || u
cccgaaa  ucagugauc ccg gguaaa c uuu  ua g
       ca         -   u      a -   gu  c 


mirna_id: eca-mir-361
hairpin:
     UU         --U  A    U   gauaa 
ggagc  AUCAGAAUC   CC GGGG ACu     u
|||||  |||||||||   || |||| |||     u
cuucg  UAGUCUUAG   GG CCCC Uga     u
     UU         UGC  A    C   aaaau 


mirna_id: eca-mir-362
hairpin:
ucuc           ACC        AG   - au 
    gAAUCCUUGGA   UAGGUGUG  Ugc c  u
    |||||||||||   ||||||||  ||| |   
    CUUAGGAACUU   AUCCACAC  Acg g  u
-aaA           ---        -A   u ac 


mirna_id: eca-mir-363
hairpin:
u   gu         ca  a         --ga   gu 
 guu  cggguggau  cg ugcaauuuu    uua  a
 |||  |||||||||  || |||||||||    |||   
 caa  GUCUACCUA  GC ACGUUAAaa    gau  u
c   AU         UG  -         agag   aa 


mirna_id: eca-mir-374b
hairpin:
--  u    ug AU             C       c 
  ac cgga  g  AUAAUACAACCUG UAAGUGu c
  || ||||  |  ||||||||||||| |||||||  
  ug gccu  u  uauuauguuggac auucacg u
uc  u    gu ac             u       a 


mirna_id: eca-mir-384
hairpin:
u    aau    a     a       c     c    -ug    a 
 guua   cagg guugu aacaauu cuagg aaug   uaua u
 ||||   |||| ||||| ||||||| ||||| ||||   |||| g
 caau   gucc uaACA UUGUUAA GAUCC UUAc   augu u
a    ---    g     C       A     -    uga    u 


mirna_id: eca-mir-421
hairpin:
    uu      -    UUA            a   aaa 
caca  guaGGC CUCA   AAUGUUUGUUGa uga   a
||||  |||||| ||||   |||||||||||| |||   a
gugu  cguccg gggu   uuacagacaacu acu   u
    cu      c    uaa            -   aag 


mirna_id: eca-mir-424
hairpin:
---------------------       a  C      AA             g  au 
                     cgagggg ug AGCAGC  UUCAUGUUUUGAA ug  u
                     ||||||| || ||||||  ||||||||||||| ||  u
                     gcucccc au ucgucg  gagugcaaaacuu gc  a
gggguggaagguugaaggggc       c  a      cg             g  aa 


mirna_id: eca-mir-448
hairpin:
------           u a            g   u     ga au    a       
      ggcggggaggu g acauccugcaua ugc gccag  a  cccc uuuuau 
      ||||||||||| | |||||||||||| ||| |||||  |  |||| ||||| a
      ccgccccucUA C UGUAGGAUGUAU ACG Ugguc  u  gggg agaauc 
cuucgc           C C            -   U     gg cg    -       


mirna_id: eca-mir-450a
hairpin:
--gaaa     u       UUU     U              cag 
      gaugc aaacugu   UGCGA GUGUUCCUAAUAUg   u
      ||||| |||||||   ||||| ||||||||||||||   a
      cuaug uuuggua   acguu uacgaggguuauau   u
auauaa     u       cgu     u              aaa 


mirna_id: eca-mir-450b
hairpin:
-           UUU     U        G    ug aa 
 uacaaaauuau   UGCAA AUGUUCCU AAUA  u  u
 |||||||||||   ||||| |||||||| ||||  |  a
 auguuuugAUA   ACGUU UACAAGGG UUau  g  u
u           CCU     U        -    gu aa 


mirna_id: eca-mir-450c
hairpin:
gaaa     uc      UUU     U               aa 
    gaugc  aacuau   UGCGA GUGUUCCUAAUACgu  u
    |||||  ||||||   ||||| |||||||||||||||  a
    cuaug  uugaua   acguu uacaaggguuaugua  u
auaa     uu      cuu     u               aa 


mirna_id: eca-mir-500-1
hairpin:
    c c     -U         UAC UG    -AGA     g 
gcuc c cucuc  AAUCCUUGC   C  GGUG    guguu u
|||| | |||||  |||||||||   |  ||||    ||||| c
cgag g gagag  uuaggaacg   g  ccac    cguaa u
    a c     cc         --- gu    guaa     g 


mirna_id: eca-mir-500-2
hairpin:
    c       -U         UAC UG    AGAg   uuu 
gcuc cccucuc  AAUCCUUGC   C  GGUG    ugc   c
|||| |||||||  |||||||||   |  ||||    |||   u
ugag gggagag  uuaggaacg   g  ccac    acg   g
    a       cc         --- gu    -gua   uaa 


mirna_id: eca-mir-501
hairpin:
-g   u      cuc      C    CU     AGAg   uuu 
  cuc cccucu   AUCCUU GUCC  GGGUG    ugc   c
  ||| ||||||   |||||| ||||  |||||    |||   c
  gag gggaga   uaggaa cggg  uccac    acg   g
cg   c      ccu      -    --     -gua   uaa 


mirna_id: eca-mir-502
hairpin:
ugcucc        -         UAU UG     UAg   ugu 
      cccucucu aAUCCUUGC   C  GGUGC   ugc   c
      |||||||| |||||||||   |  |||||   |||   u
      gggagagA UUAGGAACG   G  CCACG   Acg   c
------        C         --- GU     -UA   uaa 


mirna_id: eca-mir-503
hairpin:
u    UA                 G   u g  g 
 gccc  GCAGCGGGAACAGUACU CAG g gc a
 ||||  ||||||||||||||||| ||| | || u
 cggg  cgucguccuuguuauga guc c ug c
a    cc                 g   u g  g 


mirna_id: eca-mir-507
hairpin:
caug    -     g    c    uc    a      uc     ggc 
    uugu gugca ugcu cacu  agga gugcca  caugu   u
    |||| ||||| |||| ||||  |||| ||||||  |||||    
    gaca cacgu augA GUGA  UUCU CACGGU  guaua   a
caug    a     a    A    GA    C      UA     aag 


mirna_id: eca-mir-508
hairpin:
---     -----  -  agc   -     g   c               U  U   CAuaga 
   accac     uc uc   ugg gugua ugc cUACUCCAGAGGGUG CA UCA      c
   |||||     || ||   ||| ||||| ||| ||||||||||||||| || |||       
   uggug     ag ag   acu cacau aug GAUGAGGUUUUCCAC GU AGU      u
cgg     uauau  c  -gu   a     a   A               U  U   acgaaa 


mirna_id: eca-mir-509
hairpin:
----   ac   -     g   cc    -     CA   G       --g  u 
    cau  ugu gugug uac  UACU GCAGA  GUG CAAUCAu   ua a
    |||  ||| ||||| |||  |||| |||||  ||| |||||||   ||  
    gua  aca uacac aug  guga cgucu  cac guuagua   au a
uaga   -c   g     a   au    a     -c   a       aaa  u 


mirna_id: eca-mir-514
hairpin:
uucuuuu   gg  cc      -     aa  g         aua 
       ugu  ua  cuacuc cagag  ug caaucaugu   a
       |||  ||  |||||| |||||  || |||||||||    
       acg  au  GGUGAG GUCUC  AC GUUAgugua   c
-uucagu   ua  aA      U     -C  A         aau 


mirna_id: eca-mir-532
hairpin:
gauuu    u       a  U      A    A   CC  uggca 
     gcuu cucucuu CA GCCUUG GUGU GGA  GU     u
     |||| ||||||| || |||||| |||| |||  ||     c
     cgaa gggaggA GU CGGAAC CACA CCU  ca     u
---uc    c       C  U      C    C   CC  uuaau 


mirna_id: eca-mir-542
hairpin:
a  ac       auC    GG    UCA         -a   c 
 gg  cucagac   UCGG  AUCA   UGUCACGAg  uac a
 ||  |||||||   ||||  ||||   |||||||||  |||  
 cc  gggucug   AGUC  UAGU   ACAGUGUuc  gug c
-  ga       gAA    AA    UAG         ac   u 


mirna_id: eca-mir-545
hairpin:
cccag    ------g   a         - u            auug     auaaa 
     ccug       cac uuaguaggc c caguaaauguuu    gauga     u
     ||||       ||| ||||||||| | ||||||||||||    |||||     g
     ggac       gug aaucgucCG G GUUAUUUACAAA    CUacu     a
-----    accucua   c         U U            -CAA     cagua 


mirna_id: eca-mir-652
hairpin:
acgaau  cua                  gagag           ca  g 
      gg   ugcacugcacaacccuag     ggugccauuca  ua a
      ||   ||||||||||||||||||     |||||||||||  || c
      cc   acgugacGUGUUGGGAUC     CCGCGGUAAgu  au u
-cacau  aac                  ----A           ua  a 


mirna_id: eca-mir-660
hairpin:
----------cu    c          -C    U      C    U   gaau 
            gcuc uucuccugUA  CCAU GCAUAU GGAG UGu    u
            |||| ||||||||||  |||| |||||| |||| |||    c
            cgag gggaggacau  ggua cgugug ccuc acg    u
guacuacuguuc    c          ua    -      u    c   aaag 


mirna_id: eca-mir-672
hairpin:
gau    aucua  -      g   UG   UUGG   A          guaua 
   ggcg     gc ccuuua uuu  AGG    UGU CUGUGUGUGA     u
   ||||     || |||||| |||  |||    ||| ||||||||||     a
   cugc     cg gggagu aaa  uuc    acg gauacacacu     u
---    ----a  u      g   gu   uaua   -          auuua 


mirna_id: eca-mir-764
hairpin:
-----auuu      uaaaaucua  a     G   U    -  U        a  cu g 
         ucgauc         gg ggcaG UGC CACU UG CCUCCUcc ug  u g
         ||||||         || ||||| ||| |||| || |||||||| ||  | g
         aguuag         cc cUGUC ACG GUGA AC GGAGGAgg ac  a a
gguuccuuu      -------ua  a     A   -    U  C        g  au a 


mirna_id: eca-mir-767
hairpin:
gcuuuu   uuau             U C       UU  C      U    c 
      gua    agguuuuugcuca G ACCAUGG  GU UGAGCA Gcag a
      |||    ||||||||||||| | |||||||  || |||||| |||| u
      cgu    uccaaggacgagU C UGGUACC  CA ACUCGU Uguu g
gucauc   uacu             C U       -U  U      C    c 


mirna_id: eca-mir-92a-2
hairpin:
  a    ug   g     uu  u   u     -      
uc uccg  ggu gggau  gu gca uacuu guguu 
|| ||||  ||| |||||  || ||| ||||| |||| a
ag aggU  CCG CCCUG  CA CGU AUgaa uauau 
  a    GU   G     UU  -   U     a      


mirna_id: eca-mir-98
hairpin:
a    uc    -          U                 U    ---------      aggg 
 ggau  ugcu caugccaggg GAGGUAGUAAGUUGUAU GUUg         uggggu    a
 ||||  |||| |||||||||| ||||||||||||||||| ||||         ||||||    u
 cuua  acgg gugugguccc uuucaucauucaacaua caau         accccg    u
a    -u    u          -                 u    agaagauua      gauu 


mirna_id: bmo-mir-306b
hairpin:
- a  --    g  G   C  G   C         accg 
 g gc  ccgc cU AGG AC AGG GGCUCUGAg    g
 | ||  |||| || ||| || ||| |||||||||     
 c cg  ggcg ga ucc ug ucc cugagacuc    c
g c  cc    -  g   a  a   a         acca 


mirna_id: bmo-mir-2851-2
hairpin:
--ugugguga        uc   a         a c    -     aaug 
          ucucucua  aca ucaucaugc c cagu gauau    u
          ||||||||  ||| ||||||||| | |||| |||||     
          AGAGAGAU  UGU AGUAGUGUg g guca cuaua    u
gagaagauaa        UA   C         a a    a     caca 


mirna_id: bmo-mir-2851-1
hairpin:
--ugugauaa     g  cc   a         a c    -    gaaug 
          ucucu ua  aca ucaucaugc c cagu gaua     u
          ||||| ||  ||| ||||||||| | |||| ||||      
          AGAGA AU  UGU AGUAGUGUg g guca cuau     u
gagaagauaa     G  UA   C         a a    a    acaca 


mirna_id: bmo-mir-2852
hairpin:
-        ----a -    --U   GG    U     uaaau    g 
 agcauaga     c CAGA   UUC  AUUU UUGUA     ugcu u
 ||||||||     | ||||   |||  |||| |||||     |||| a
 ucguaucu     g guuu   aag  uaga aacau     gcga u
a        gccaa a    uuu   --    c     caagu    g 


mirna_id: bmo-mir-1b
hairpin:
-cc     - c   AUA         A       ugauu 
   gcgca g uCC   CUUCUUUAC UUCCAUA     a
   ||||| | |||   ||||||||| |||||||     c
   cgcgu c AGG   GAAGGAAUG AGGGUau     a
gaa     u A   CAC         A       cagua 


mirna_id: bmo-mir-2854
hairpin:
-     -    ----uU  UUCA      C    C    uuu 
 aagcc cuuu      CU    AAACUG AGGA GGcc   a
 ||||| ||||      ||    |||||| |||| ||||   u
 uuugg gaag      ga    uuugac uuuu ccgg   a
c     u    uaaauc  cgca      c    -    ugc 


mirna_id: bmo-mir-2855
hairpin:
uguu  -     GG   -ACU   CA   CU    g  c 
    gu gugaC  GUA    UUG  UCG  GGCA ug a
    || |||||  |||    |||  |||  |||| ||  
    ca cacug  cgu    aac  agc  ccgu ac a
---g  g     -a   cucu   -c   -u    a  g 


mirna_id: bmo-mir-2833b
hairpin:
aga      gg    c    g -aa ug   -    u 
   auucgc  uaaa agug a   c  guc cuca a
   ||||||  |||| |||| |   |  ||| |||| u
   uaagug  auUU UCAU U   G  UAG GAgu g
aaa      --    U    G AAA GU   A    u 


mirna_id: bmo-mir-2856-1
hairpin:
ac    c  uc      -GU     GA     ag   g  acag 
  ugua ua  UUGUCU   GGUUC  GGGUG  auu uc    c
  |||| ||  ||||||   |||||  |||||  ||| ||    a
  auau au  AACAGA   CCAAG  CUUAC  ugg gg    g
aa    a  -u      AUG     AG     -A   g  auau 


mirna_id: bmo-mir-2856-2
hairpin:
cugugcuauc      -GU     GA     ag  ug  acag 
          UUGUCU   GGUUC  GGGUG  au  uc    c
          ||||||   |||||  |||||  ||  ||    a
          AACAGA   CCAAG  CUUAC  ug  gg    c
aaauauaauu      AUG     AG     -A  gu  auau 


mirna_id: bmo-mir-2857
hairpin:
-       a  U A      -  A     AA  U   ggag 
 cuguaug cc G UGGGAC AC UACGG  CA gcu    c
 ||||||| || | |||||| || |||||  || |||    u
 gacauac gg c acucug ug gugcu  gu cga    a
g       a  u -      c  -     -a  -   agaa 


mirna_id: bmo-mir-2859
hairpin:
cgca   g  ga -    g g  c    -ua  uuac   g 
    ccu ag  g ccug c ga cagu   ug    gau a
    ||| ||  | |||| | || ||||   ||    ||| a
    ggg uc  C GGAC G CU GUUA   AC    cua c
cuca   g  AA A    G G  A    UCA  cccc   a 


mirna_id: bmo-mir-2860
hairpin:
gaag   a  --C     --A G     -  GAG    --g  a 
    gac cc   GCUGU   U AUUGU CC   GUAc   ag g
    ||| ||   |||||   | ||||| ||   ||||   ||  
    cug gg   cggua   g uagca gg   cgug   uc a
cgca   a  aaa     gga g     a  --a    gca  g 


mirna_id: hsa-mir-2861
hairpin:
-gg       gca    - g    -  -  u      uc    acu 
   cgccucu   gcuc c gcuc cc cc ggccuc  ggga   a
   |||||||   |||| | |||| || || ||||||  ||||    
   gcggaga   cggg G CGGG GG GG CCGGGG  cccu   c
ggg       agg    c G    U  C  U      ga    gaa 


mirna_id: mmu-mir-2861
hairpin:
   c    cag     g  c  -  u       c    acu 
cuc ucug   cuccg cu cc cc ggccucc ggga   a
||| ||||   ||||| || || || ||||||| ||||    
gag aggc   gaGGC GG GG GG CCGGGGg cccu   c
   a    -ca     G  C  C  U       a    gaa 


mirna_id: ola-mir-430a-1
hairpin:
      -       a   ug   -ca      g   - uuuc 
ggacau aaagaug ccu  aca   ggcacu acu c    u
|||||| ||||||| |||  |||   |||||| ||| |     
ccugug uuuuuAU GGG  UGU   UCGUGA Uga g    u
      g       -   GU   UCA      A   u uuuc 


mirna_id: ola-mir-430c-1
hairpin:
--c      uc    g          -a      g   -    u 
   agacau  agau accuuaacau  ggcacu acu ugaa a
   ||||||  |||| ||||||||||  |||||| ||| ||||  
   ucugug  ucuG UGGGGUUGUA  UCGUGA Uga guuu u
cga      gu    A          CA      A   c    c 


mirna_id: ola-mir-430b-1
hairpin:
      a     g    ug   -ca      g   uuuuc 
ggacau aagau accu  aca   ggcacu acu     u
|||||| ||||| ||||  |||   |||||| |||     u
ccugug uuuuA UGGG  UGU   UCGUGA Uga     c
      g     A    GU   ACA      A   uguuu 


mirna_id: ola-mir-430c-2
hairpin:
  cg     uc    g          -a      g   -    u 
gu  gacau  agau accuuaacau  ggcacu acu ugaa u
||  |||||  |||| ||||||||||  |||||| ||| ||||  
cg  cugug  ucuG UGGGGUUGUA  UCGUGA Uga guuu u
  au     gu    A          CA      A   c    c 


mirna_id: ola-mir-430c-3
hairpin:
-au       uc    g          -a      g   -    u 
   cagacau  agau accuuaacau  ggcacu acu ugaa u
   |||||||  |||| ||||||||||  |||||| ||| ||||  
   gucugug  ucuG UGGGGUUGUA  UCGUGA Uga guuu u
agu       uu    A          CA      A   c    c 


mirna_id: ola-mir-430d-1
hairpin:
      - uuc     c        c   ga    gau  uuu 
gaaucg c   gagac aucucaaa aga  cacu   gg   u
|||||| |   ||||| |||||||| |||  ||||   ||   g
uuuggu g   cucuG UGGGGUUU UCU  GUGA   cc   a
      u uaa     U        C   UC    -AU  uuu 


mirna_id: ola-mir-430a-2
hairpin:
            g    ug   -ca      g   - uuuc 
ggacaucaagau accu  aca   ggcacu acu c    u
|||||||||||| ||||  |||   |||||| ||| |     
ccugugguuuua UGGG  UGU   UCGUGA Uga g    u
            A    GU   UCA      A   u uuuc 


mirna_id: ola-mir-430c-4
hairpin:
ccuuuc    -     uuuccu   caaa  aua      cnnnnnnnnnnucuuu   g 
      uuag cacua      gac    ac   ccaaca                gca U
      |||| |||||      |||    ||   ||||||                ||| A
      gauc guggu      cuG    UG   GGUUGU                CGU A
---aac    u     -----u   ---A  --G      ------------ACAU   G 


mirna_id: ola-mir-430d-2
hairpin:
      - uuc     c        c   ga    gau  uuu 
gaaucg c   gaggc accucaaa aga  cacu   gg   u
|||||| |   ||||| |||||||| |||  ||||   ||   g
uuuggu g   cucuG UGGGGUUU UCU  GUGA   cc   a
      u uaa     U        C   UC    -AU  uuu 


mirna_id: ola-mir-430c-5
hairpin:
guc      uc    g          -a      g   -    u 
   ggacau  agau accuuaacau  ggcacu acu ugaa u
   ||||||  |||| ||||||||||  |||||| ||| ||||  
   ucugug  ucuG UGGGGUUGUA  UCGUGA Uga guuu u
uga      gu    A          CA      A   c    c 


mirna_id: ola-mir-430d-3
hairpin:
      - uuc     c        c   ga    gau  uuu 
gaaucg c   gaggc aucucaaa aga  cacu   gg   u
|||||| |   ||||| |||||||| |||  ||||   ||   g
uuuggu g   cucuG UGGGGUUU UCU  GUGA   cc   a
      u uaa     U        C   UC    -AU  uuu 


mirna_id: ola-mir-430b-2
hairpin:
      a     g    ug   -ca      g   - uuuc 
ggacau aagau accu  aca   ggcacu acu c    u
|||||| ||||| ||||  |||   |||||| ||| |     
cuugug uuuuA UGGG  UGU   UCGUGA Uga g    u
      g     A    GU   ACA      A   u uuuc 


mirna_id: ola-mir-430c-6
hairpin:
aaaaaaauuuucaaa  -uuuu   uuugg     nnnnnnnnnna    -  u 
               cu     ccu     gcccc           auuu cu u
               ||     |||     |||||           |||| ||  
               ga     ggg     UGGGG           UGAA ga g
------------aac  ucugu   ucuGA     -UUGUACAUCG    U  c 


mirna_id: ola-mir-430c-7
hairpin:
aaaagaaauguguuucuccuc   -  -    uu  auu   uu   gUAAG 
                     ugc gg uacc  ga   ucu  gca     U
                     ||| || ||||  ||   |||  |||      
                     acg uc gugg  cu   GGG  UGU     G
--------------------a   a  u    uu  GAU   GU   ACAUC 


mirna_id: osa-MIR2863a
hairpin:
u            U                     g     cu  agggaguaaauucua 
 ggguacccaUUG CCCAUUCUAGUUUAGCUaaau aacua  ac               u
 |||||||||||| ||||||||||||||||||||| |||||  ||                
 uccauggguaac ggguaagaucgaguugauuua uugau  ug               g
-            u                     a     uu  agugaaaaggaccag 


mirna_id: osa-MIR2864
hairpin:
ucuauucag      C  C                 U     uagcaaua      uc 
         cUUUUG UG CCUUGUUUUGCAUUGUA AGGUA        ugccau  u
         |||||| || ||||||||||||||||| |||||        ||||||   
         gagaac ac ggaacaaaacgugacau uccau        acggug  g
---------      a  a                 c     --------      au 


mirna_id: osa-MIR2865
hairpin:
----   c   -      A      G                g        cc 
    gau uga aucCUC GCAGUC ACUGUACCGUGccuuu ucauugau  a
    ||| ||| |||||| |||||| |||||||||||||||| ||||||||   
    cua acu uaggag cgucag ugacguggcacggaaa agugauug  c
aggc   -   c      a      -                a        ua 


mirna_id: osa-MIR2866
hairpin:
------                               a     -acua  acg 
      acccuuuuucUCUAGUUUGUGUUCAGCAUCu uguca     ug   c
      ||||||||||||||||||||||||||||||| |||||     ||    
      ugggaaaaagagaucaaacacgagucguaga acagu     ac   u
uuauac                               c     caaac  aag 


mirna_id: osa-MIR2867
hairpin:
caau                       A   C A  a        g   caa 
    ugacggcgUGUGCCAUCCCACAC UCC G uc uggcgugu aca   c
    ||||||||||||||||||||||| ||| | || |||||||| |||    
    acuguuguacACGGUAGGGUGUG AGG C ag accgugcg ugu   u
----                       C   A C  c        -   agg 


mirna_id: osa-MIR2868
hairpin:
-------ucu   g                        ugccc 
          uuu uccUUGGUUUUGUGUAGUAGAAAa     a
          ||| ||||||||||||||||||||||||      
          aaa aggaaccaaaacacguuaucuuuu     c
auacacaugu   g                        uacuu 


mirna_id: osa-MIR2869
hairpin:
gggaggaggag   -             u                        gaa   u  g   uu    u   ag ag  g 
           cuu cccaggauuuaau uugggagguggugaguacuaagga   cag au uug  cagc ggc  g  cu c
           ||| ||||||||||||| ||||||||||||||||||||||||   ||| || |||  |||| |||  |  ||  
           gga GGGUCUUAAAUUA AGCCCUccauuacucaugguuccu   guu ug gac  gucg ccg  c  gg a
----ugaauua   C             C                        --a   -  g   cg    -   aa ga  a 


mirna_id: osa-MIR2870
hairpin:
cuu   c                     a      c          cu  uuacaaaugaguaaccacuaacuucugaguu 
   gua uucaguuugucucuccaaacu auuagu caaugaacuu  ga                               c
   ||| ||||||||||||||||||||| |||||| ||||||||||  ||                                
   cgu aagucAAACAGAGGGGUUUGA UAAUca guuacuugaa  cu                               u
---   a                     C      c          ac  uucuuuaacguuaucaauauagagguauuag 


mirna_id: osa-MIR2863b
hairpin:
ucuuuu      a         c           a      c    a a 
      acccac cuaguucaa uaaaugaacua auuuca uuuu g a
      |||||| ||||||||| ||||||||||| |||||| |||| | u
      ugggUG GAUCAGGUU AUUUGCUUgau uaaagu aaaa c c
auuaac      A         U           g      a    a a 


mirna_id: osa-MIR2905
hairpin:
-      c                           cauug 
 acugca ugugccuuugucacugacaugugggcc     a
 |||||| |||||||||||||||||||||||||||      
 ugacgu gcACGGAAACAGUGACUGUACAUccgg     u
c      a                           accuc 


mirna_id: osa-MIR2871a
hairpin:
-----  u                  C        aa    --------a        -    cuuu 
     ca gguGACCGUAGAAACUAG AUAGAAAA  guag         uaucucaa guga    g
     || |||||||||||||||||| ||||||||  ||||         |||||||| ||||     
     gu uCACUGGUAUCUUUGAUU UAUcuuuu  cauc         auaggguu cauu    u
cggug  u                  U        -c    aaugaacag        g    uacu 


mirna_id: osa-MIR2871b
hairpin:
         c                       c      aaa       auaucucaagugacuuuguuc 
auggcugcc accauggugaccguagaaacuaa auagaa   gagguag                     a
||||||||| ||||||||||||||||||||||| ||||||   |||||||                     u
uaccgacgg ugguauCACUGGUAUCUUUGAUU UAUcuu   uuccauc                     u
         -                       U      ---       aaugaacagauaagguugcau 


mirna_id: osa-MIR2872
hairpin:
cuuaga     uca                 ua   u        u  ugauu     c             auggcaacaggaugcucgaucuuccaucagguaaagauaacucuugauuuggcgaaaacuugucacacaugauuugacuuucgaucaacacgaucuaaacuugcaauuucag 
      uuauu   uaguucgguuuguagaa  cca cuucgagu cu     aauca ucaucugcaauug                                                                                                                c
      |||||   |||||||||||||||||  ||| |||||||| ||     ||||| |||||||||||||                                                                                                                 
      agugg   aUCAAGCCAAACAUCUU  GGU gaagcuca ga     uuagu aguagacguuaac                                                                                                                a
-----a     -ug                 GG   u        c  ----u     a             ucgauguuagauggaaaaagaacgaacauaagaagcuaagcguacguuccuaaucggaagagucacuuccgguuagucuaaagccgugccaaccauugaucuuuucuguacc 


mirna_id: osa-MIR2873a
hairpin:
aauauauuc           c           c           u     uu 
         uuaccaaauuu aaguucaaacu aacuuuauuug gagaa  u
         ||||||||||| ||||||||||| ||||||||||| |||||  u
         AAUGGUUUAAA UUCAGGUUUGA uugaaguaaac cucuu  u
-----uaaC           -           A           u     ug 


mirna_id: osa-MIR2874
hairpin:
       guuu          ga                    c     u 
acacuau    gcacuguuug  acuguucacauguugguucc ggcag a
|||||||    ||||||||||  |||||||||||||||||||| ||||| a
ugugaua    UGUGACAAAC  UGACAAGUGUAcaaucaagg ucguc a
       -aaC          UG                    -     a 


mirna_id: osa-MIR2875
hairpin:
--------u         uaugaacuguagaugacuguaaaua 
         gaucaaaua                         u
         |||||||||                         a
         cuaguuuau                         c
auguuugug         AUAUUUGACAUAUACUGACAUUUAa 


mirna_id: osa-MIR2876
hairpin:
uuuuugagg               C           a            auaauugcuccugagcuuguguuugucauaaauguuaguuguua 
         aAAUUGCUGGCAGCA UGUUUAuauag aauuucuguaaa                                            c
         ||||||||||||||| ||||||||||| ||||||||||||                                            u
         uuuaacgacCGUUGU ACAAGUAUAUC UUaaggacauuu                                            g
--------g               C           C            guucguucuuacaaaucccuuugaaaauuccuuucuuuguagau 


mirna_id: osa-MIR2877
hairpin:
------------aaucuugguuuaauguaucauccgauguccaaagugcagaugacgcagcuugggugcugauguggcaa         gu                -   c c  au    c         uc     u     c     u        --uuuug      gg    aacuaugaauuu  u 
                                                                                uccacggug  gagaauuuugcauuua gcc c uc  gcua aguaugccu  aaguc acucc accac cccaaauc       gugcau  cuua            gc g
                                                                                |||||||||  |||||||||||||||| ||| | ||  |||| |||||||||  ||||| ||||| ||||| ||||||||       ||||||  ||||            || g
                                                                                aggugucac  cucuuaaaacgugaau cgg g ag  ugau ucauacggg  uuuag ugagg uggug ggguuuag       uacgua  gagu            cg a
aaagggagauuuuuugugggaauuagaaccaaauuacauagugagcUCCGGGUUUCACGUCUCCUACGUUgaguccgaac         ug                g   a a  --    a         gc     c     a     -        uuguuua      aa    ------------  u 


mirna_id: osa-MIR2878
hairpin:
-       uuc                                      a 
 auaaugu   uuuaguucuuUACAUGUAUAAAAUUCUGAGGAUGuuau u
 |||||||   ||||||||||||||||||||||||||||||||||||||  
 uauuaca   aaauUAAGAAAUGUACAUAUUUUAGGACuccuacagua a
a       uac                                      u 


mirna_id: osa-MIR1863c
hairpin:
--------------------------------------agcaaugcaucaguuauguuuccuggaucauuaaauca     u  uuau       c    ug        ----------     ugu        aaagcacuuuaugaucugaaagugcuggcuguau 
                                                                            uugaa gu    cuagcac aauc  cugcugau          cuguu   agucauga                                  g
                                                                            ||||| ||    ||||||| ||||  ||||||||          |||||   ||||||||                                   
                                                                            ggcuu ca    gguugug uuag  gaugacua          gauaa   ucagugcu                                  c
cagagguuuUCAUUACGUAGUCGGUUCAAAGAUuuaguuauuguaccauagucucgauuauugauacuaggauuug     -  ucuc       c    gu        auaacguagu     --u        aacguuauuauugguaucuuaccccuuuugguac 


mirna_id: osa-MIR2879
hairpin:
ugcccag   cg  c           c         c  a    c        --       ua   a  a     g   a     -   a  ugu  a    u  caaucagaucacaaaagauuauacugacacuaaauucaucugaucuagua 
       acg  cu uggucauuauu uaacauauc gg ucaa uggagaga  gaauuuu  gaa gg uguuu ugc cuugu uca cc   uu acaa ca                                                  c
       |||  || ||||||||||| ||||||||| || |||| ||||||||  |||||||  ||| || ||||| ||| ||||| ||| ||   || |||| ||                                                   
       ugu  ga aCCAGUAAUAA AUUGUGUAG CC aguu accucucu  uuuaaaa  uuu cc gcgaa aug gagca ggu gg   aa uguu gu                                                  u
-------   au  u           A         A  G    a        aa       ua   a  -     a   g     c   a  --u  c    u  agauuuuuacuaguucaucaguuuuguucuccguaauacgccuuuuuauu 


mirna_id: osa-MIR2880
hairpin:
       a       A            A       a c  a         u         ag  augccaauaccuaguagguauuggc 
augcuac ggACGGU UCCCGUUCGGAC GGAUGau c uc gagguaucg cugauaccc  gu                         g
||||||| ||||||| |||||||||||| ||||||| | || ||||||||| |||||||||  ||                          
uacgaug ccugcca agggcaagucug ccuacua g ag uuccauagc gacuauggg  ca                         a
       c       a            c       - u  a         c         -g  aaccuguacuacuauggaguuccau 


mirna_id: osa-MIR396g
hairpin:
--     cguc   g   gg     -   gag      c  ga aggag g   g     g      ----a   g -g     ---------  g     u 
  ggcga    gag cgu  aagga guc   guggag ug  g     c ccg cgccg cgccgu     gcu g  cgcgu         cg cgucg g
  |||||    ||| |||  ||||| |||   |||||| ||  |     | ||| ||||| ||||||     ||| |  |||||         || ||||| c
  ccguu    cuu GCA  UUCUU CGG   CACCUu ac  c     g ggc gcggc gcggca     cgg c  gcgcg         gc gcggc g
cg     ----   G   AG     U   --A      u  gg ---gg g   g     g      gaugg   g ag     agagguaga  g     g 


mirna_id: osa-MIR396h
hairpin:
ag   ----    -gg        -g    ug   guggg   g      g  ga g     ---ga   g  g 
  ggc    gccg   gaggaggu  gugg  gug     ggc acgccg cg  g uguuc     cgc gc g
  |||    ||||   ||||||||  ||||  |||     ||| |||||| ||  | |||||     ||| ||  
  ccg    uGGC   UUCUUUCG  CACC  uac     ccg ugcggc gc  c gcagg     gcg ug a
ca   uucu    AAG        GA    Uu   aggaa   g      g  gg g     aggag   g  g 


mirna_id: osa-MIR396i
hairpin:
--uaca    g g    u       -g         a    --gg  g  gg   -  ug  g 
      gcga u guuc ggaaggc  guggaggug cggc    cg cc  cgc cg  gc g
      |||| | |||| |||||||  ||||||||| ||||    || ||  ||| ||  || g
      cguu G CAAG UCUUUCG  CACCUucgc gucg    gc gg  gug gc  cg g
cgccgg    - G    U       GA         -    agca  g  gg   a  gu  g 


mirna_id: osa-MIR1863b
hairpin:
-----   u  c             c     c  c       -                 -------a     a    aaugaau  uuau       caauccccugcugcuaggagcuguagcucucggggcaguaccuaauccgcugcugaucuguuucuagucaugaaaagcacugugaucug 
     caa ag aaugcaucaguua guuuc ua auaguua caugguaucagagcuga        auccu aacc       gu    ccagcac                                                                                         u
     ||| || ||||||||||||| ||||| || ||||||| |||||||||||||||||        ||||| ||||       ||    |||||||                                                                                         a
     guu UC UUACGUAGUCGGU CAGAG Au UGUCAAU GUACCAUAGUCUCGAuu        uagga uugg       ca    gguugug                                                                                         a
caaag   u  A             U     -  U       U                 gucgauuc     g    ---gguu  ucuc       uuuagguagugacuaauaacguagugacaguccagugcuuagguugcuaccgguaucuuaacccguuuugguaccguacgucguucgug 


mirna_id: bta-mir-193a-2
hairpin:
au     -   c         g a    
  ggcug ccu acaagguuu g gcu 
  ||||| ||| ||||||||| | || g
  UUGAC GGA UGUUUCAGG u cgu 
ac     C   -         G c    


mirna_id: bta-mir-378-2
hairpin:
  -ag  cA  GG   UGG   C   A   u  a   uac 
gg   ag  CU  ACU   AGU AGA GGC gg gcu   a
||   ||  ||  |||   ||| ||| ||| || |||    
cc   uc  ga  ugg   uca ucu cug cc cga   g
  gca  aa  gg   ---   -   a   -  a   cgg 


mirna_id: bta-mir-669
hairpin:
ag   --gU    G  UG             g 
  agu    GUGG UG  UGCAUGUGCGUGu u
  |||    |||| ||  |||||||||||||  
  ucg    uauc gu  guguauacguaca g
ug   auuc    g  gu             c 


mirna_id: bta-mir-2881
hairpin:
      ug  a   g -   C          G     
uguguu  gg guu G GGG GGGGGGGCGG UGga 
||||||  || ||| | ||| |||||||||| ||| u
auacag  uc cag u cuc cccuucuguc accu 
      ug  a   g g   -          g     


mirna_id: bta-mir-2882
hairpin:
cA    -    -CCC    C  --   ccg 
  GCCC GGGC    UCCC UG  gcu   c
  |||| ||||    |||| ||  |||    
  cggg cccg    aggg ac  cga   c
uc    a    accc    u  ua   cac 


mirna_id: bta-mir-2883
hairpin:
gag     -   acca   g  c c   -    c 
   gcggc cag    gca gg g agg ggac a
   ||||| |||    ||| || | ||| |||| u
   cgCCG GUU    UGU CC C UCc ccug g
gug     A   ---G   G  - U   u    u 


mirna_id: bta-mir-2885
hairpin:
     ---         - ---a   g  gg 
ucugg   ggcgccccg c    ccg cg  c
|||||   ||||||||| |    ||| ||  a
aggcu   ccGCGGGGC G    GGC GC  g
     cug         C CGAC   G  ag 


mirna_id: bta-mir-2886
hairpin:
cc   -  --acu   -   --uc  a    c  c   aua 
  ggc cu     ugg ggc    cg gccg ug cgc   c
  ||| ||     ||| |||    || |||| || |||    
  ucg ga     acu ccg    GC CGGC GC GCG   a
--   c  cuucc   g   CCAC  -    C  C   Auu 


mirna_id: bta-mir-2887-1
hairpin:
c    G -A   G GU    UG     a 
 guCG G  CCG G  CCGG  CGgag g
 |||| |  ||| |  ||||  |||||  
 cggc c  ggc c  ggcc  gcuuc c
c    g gg   a ag    cu     c 


mirna_id: bta-mir-2888-1
hairpin:
-----      u   ug ag -au      g     
     ccucuc ccc  c  c   cucagg cacu 
     |||||| |||  |  |   |||||| ||| g
     GGGGGG GGG  G  g   ggguuc gugu 
GGUUG      U   GU Gg gcu      a     


mirna_id: bta-mir-2888-2
hairpin:
      u   ucua      a  ug   ug   guc 
ggaggg gcc    agccuc cu  ucc  ccu   a
|||||| |||    |||||| ||  |||  |||    
ccuuuc cGG    UUGGGG GG  GGG  GGg   a
      -   ----      -  GU   GU   gua 


mirna_id: bta-mir-2889
hairpin:
g  -     GG       --G    C g  uu 
 cG UCCCC  GGCUCCC   CCGG g ag  c
 || |||||  |||||||   |||| | ||   
 gc agggg  ccggggg   ggcc c uu  g
g  u     --       agg    a g  ug 


mirna_id: bta-mir-2890
hairpin:
-cggc        aa   --    ug   u     g ccc 
     ggccggga  ggu  gggc  ggc ccggg c   u
     ||||||||  |||  ||||  ||| ||||| |    
     CCGGCCCU  CCG  CCCG  ucg ggccc g   c
guguU        CG   GC    --   u     - ccc 


mirna_id: bta-mir-2891
hairpin:
aaaaA       -------G   G  UA     a   ua         a 
     UCUUUGG        CUA GU  GUUcu uuu  ugaucuguu u
     |||||||        ||| ||  ||||| |||  |||||||||  
     agagacu        ggu ua  uagga aag  auuggguaa g
-----       agaaagaa   g  cc     a   ga         a 


mirna_id: bta-mir-2892
hairpin:
gu    --A   A    C   --C    cccc -    cccccccc       gu 
  GGCG   CGG GGCG GAC   CCCC    c cccc        cgccccg  c
  ||||   ||| |||| |||   ||||    | ||||        |||||||   
  ccgc   gcc ccgc cug   gggg    g gggg        gcggggc  c
-c    ccc   -    -   aca    ucuc c    accgccca       ag 


mirna_id: bta-mir-2893
hairpin:
-c U       ---AAU      GG  ug  g 
  G GGAGGAG      GCCCGG  cg  cu g
  | |||||||      ||||||  ||  ||  
  c ccuccuc      cggguc  gc  gg g
cu -       gacggu      gg  gu  c 


mirna_id: bta-mir-2894
hairpin:
c   a   g   uc   aca   cccu   uc      c   u a 
 gca cga ggc  ggg   cag    gcu  cuggcc acg c c
 ||| ||| |||  |||   |||    |||  |||||| ||| |  
 uGU GCU CCG  CCC   GUC    CGA  gaccgg ugc g c
c   -   A   -U   --G   ---C   --      -   u c 


mirna_id: bta-mir-2895
hairpin:
cc  ga    c    cCCU  U   -    CAU  A   A   u 
  cu  guug aauu    GC GAU CUCA   UA UUC ucu u
  ||  |||| ||||    || ||| ||||   || ||| ||| g
  ga  uaac uugg    ug cug gagu   au aag aga c
cc  aa    -    -uuu  u   u    -cu  a   -   u 


mirna_id: bta-mir-2896
hairpin:
aca     c   - g   a  -    aca 
   cccgg ugg c uca cu cuga   g
   ||||| ||| | ||| || ||||    
   gggCU ACC G AGU GA GGCu   a
gaa     -   U A   A  C    cuu 


mirna_id: bta-mir-2897
hairpin:
G    G     -     CGAGcac    uc      c 
 GUGG AGGGU CCCAC       ccug  ggcugg a
 |||| ||||| |||||       ||||  |||||| g
 cacc ucucg gggug       ggac  ccggcc c
a    g     u     -----au    --      c 


mirna_id: bta-mir-2898
hairpin:
-gguuua   -     cu   ag    uu    uucuu 
       aug cucug  guc  cgcu  gaaa     a
       ||| |||||  |||  ||||  ||||     c
       ugc GGGGC  UAG  GUGG  uuuu     u
uuaauaa   A     CG   AG    Uu    ucuaa 


mirna_id: bta-mir-2899
hairpin:
aggg    ag  g      a  aa   -gg   a 
    ggag  uu cggcuc ug  cug   ucc g
    ||||  || |||||| ||  |||   |||  
    ccuu  aA GUUGGG GC  GGC   agg g
ucga    gg  G      -  CG   GGA   u 


mirna_id: bta-mir-2900
hairpin:
agucaagugagcg     a   g       
             gccgc ccg cucucc 
             ||||| ||| ||||| c
             CGGCG GGC GGGAgg 
---gaAAGGUCAG     -   -       


mirna_id: bta-mir-2901
hairpin:
ac     u u   c cu         -gc     --u     a 
  gcgcu c cgg g  cacucggcg   accac   gccgc a
  ||||| | ||| |  |||||||||   |||||   |||||  
  CGCGA G GCC C  GUGAGCCgc   uggug   cggcg a
uU     - C   - UC         guc     cuu     u 


mirna_id: bta-mir-2902
hairpin:
ucac    g       u a  g       g gg 
    ccca ucucuag g ga agccaug c  c
    |||| ||||||| | || ||||||| |   
    GGGU GGAGGUC C CU UCGGUGc g  a
guca    -       - -  G       g gg 


mirna_id: bta-mir-2903
hairpin:
c   -   cc   -            CU  A          - u 
 gcc gcu  gcu cccggUUCCGCG  CU CGCCAGCccg c g
 ||| |||  ||| ||||||||||||  || |||||||||| | c
 cgg cgg  cgg gggccgaggcgc  ga guggucgggc g c
a   a   cc   c            cg  c          c u 


mirna_id: bta-mir-2904-1
hairpin:
     ag     -    AG CU   UU  CC    a 
acggc  cgccg cGGG  C  CGG  GG  UCgg u
|||||  ||||| ||||  |  |||  ||  ||||  
ugccg  gcggc gccc  g  gcc  cc  ggcc a
     -g     c    cu cc   --  cu    g 


mirna_id: hsa-mir-2909
hairpin:
--         -GC     -  -      ucuuu  c 
  gguGUUAGG   CAACA UC UCUUGG     cc c
  |||||||||   ||||| || ||||||     || u
  ccgcaauuc   guugu gg agaacc     gg g
ua         aac     c  u      ---cu  u 


mirna_id: ssc-mir-206
hairpin:
uucc    gc                 cc     c gauu 
    cgag  cacaugcuucuuuauau  ccaua g    a
    ||||  |||||||||||||||||  ||||| |     
    gcuc  GUGUGUGAAGGAAUGUA  GGUau c    c
aauu    uA                 -A     - aguu 


mirna_id: ssc-let-7a-1
hairpin:
-      uU   G   U            Uuagaauug    aa 
 cccagg  GAG UAG AGGUUGUAUAGU         uauc  g
 ||||||  ||| ||| ||||||||||||         ||||   
 ggguuc  uuc auc uccgacauguca         auag  g
u      cu   g   c            ---------    ag 


mirna_id: ssc-let-7e
hairpin:
gcccc   cU   G                U  ----g a  a 
     ggg  GAG UAGGAGGUUGUAUAGU ga     g gg c
     |||  ||| |||||||||||||||| ||     | ||  
     ccc  uuc auccuccggcauauca cu     c cc a
---ga   cu   g                -  agagg a  c 


mirna_id: ssc-let-7g
hairpin:
ggcU        A            ugagg    -a  a    a 
    GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
    |||||||| ||||||||||||     ||||  || ||||  
    uuccguca cggacaugucaa     uaga  ac augg c
---g        c            -----    gg  -    c 


mirna_id: ssc-mir-378-1
hairpin:
--    c    g  c              ugu      ccu 
  ccac cagg cu cugacuccaggucc   guguug   g
  |||| |||| || ||||||||||||||   ||||||    
  ggug gucC GA GACUGAGGUUCAGG   CAcgau   g
ga    c    G  A              --U      aaa 


mirna_id: ssc-mir-133b
hairpin:
-----      c        ca  c  a      u  g      
     ccugcu uggcuggu  aa gg accaag cc ucuuc 
     |||||| ||||||||  || || |||||| || |||| c
     ggacga AUCGACCA  UU CC UGGUUU gg agagu 
ggucg      U        AC  C  C      -  -      


mirna_id: ssc-mir-29a
hairpin:
    uuagagg            uuu       c    ucaa 
cccc       augacugauuuc   ugguguu agag    u
||||       ||||||||||||   ||||||| ||||    a
gggg       uAUUGGCUAAAG   ACCACGA UCuu    u
    uuaguaa            UCU       -    uuaa 


mirna_id: ssc-mir-30d
hairpin:
-----cu  u  U         CCC           gua  ac 
       gu gu GUAAACAUC   GACUGGAAGCU   ag  a
       || || |||||||||   |||||||||||   ||   
       ca cg cguuuguag   cugacuuucga   uc  u
ucucagc  c  u         --a           --a  ga 


mirna_id: ssc-mir-30e
hairpin:
--u     a            UU           g ga  c 
   uugcc cUGUAAACAUCC  GACUGGAAGCU u  gg g
   ||||| ||||||||||||  ||||||||||| |  ||  
   gacgg GACAUUUGUAGG  CUGACUUUCga g  cc u
ucg     C            --           g ac  u 


mirna_id: ssc-mir-199a-2
hairpin:
-   c   aaC       U        C   ------     g 
 ccc gcc   CCAGUGU CAGACUAC UGU      UCagg g
 ||| |||   ||||||| |||||||| |||      |||||  
 ggg cgg   GGUUACA GUCUGAUG ACA      agucu g
c   u   AUU       C        -   ugugua     c 


mirna_id: ssc-mir-128-2
hairpin:
--        a          agg      cc    g gag 
  gcaguggg aggggggccg   cacugu  gaga u   u
  |||||||| ||||||||||   ||||||  |||| |    
  ugucaucc UUUCUCUGGC   GUGACA  CUcu g   a
ug        c          CAA      --    g acg 


mirna_id: ssc-mir-191
hairpin:
--ac      C          C  AA       uu  -  c 
    agcggg AACGGAAUCC AA  GCAGCUG  gu cu c
    |||||| |||||||||| ||  |||||||  || ||  
    ucgucc uugcuuuagg uu  cgucgac  ua ga a
ucuc      c          -  ca       cu  c  g 


mirna_id: ssc-mir-499
hairpin:
u   c       cgUUA        A          acucc 
 ggg gggcggc     AGACUUGC GUGAUGUUUa     u
 ||| |||||||     |||||||| ||||||||||     c
 ccc uucgUCG     UCUGAACG CACUACAAgu     u
-   -       ---UG        A          gcacc 


mirna_id: ssc-mir-320
hairpin:
gc       ---------         uu       c      g 
  uccccuc         cgccuucuc  cccgguu uucccg a
  |||||||         |||||||||  ||||||| ||||||  
  aggggag         GCGGGAGAG  GGGUCGA AAgggc g
-c       aaggaaaAA         UU       A      u 


mirna_id: ssc-mir-143
hairpin:
g  c   ag  g   G         G      U  -  ag 
 uc ccc  cc gaG UGCAGUGCU CAUCUC GG uc  c
 || |||  || ||| ||||||||| |||||| || ||   
 ag ggg  gg CUC AUGUCACGA GUAGAG cu ag  u
-  a   aa  g   G         A      U  g  gg 


mirna_id: ssc-mir-423
hairpin:
-----    u            -AG   G    A     cua 
     aagu aggcUGAGGGGC   AGA CGAG CUUUu   u
     |||| ||||||||||||   ||| |||| |||||   u
     uucg ucUGACUCCCCG   UCU GCUC GAaaa   u
caucc    u            GAG   G    -     ccu 


mirna_id: ssc-mir-151
hairpin:
---uu      c            CA          c ucu 
     uuccug ccUCGAGGAGCU  CAGUCUAGUa g   c
     |||||| ||||||||||||  |||||||||| |    
     agggac GGAGUUCCUCGA  GUCAGAUCau c   a
cugcu      A            -A          c ccu 


mirna_id: ssc-mir-10a
hairpin:
---u        A    G     C          uaaggaa 
    cuguauaU CCCU UAGAU CGAAUUUGUg       u
    |||||||| |||| ||||| ||||||||||        
    gauguaUA GGGG AUCUA GCUUAAACac       u
aguu        A    -     U          ugguguu 


mirna_id: ssc-mir-10b
hairpin:
-- u        A    G     C          -ug  au 
  g cuauauaU CCCU UAGAA CGAAUUUGUg   gu  c
  | |||||||| |||| ||||| ||||||||||   ||   
  c gguauaua gggg aucuu gcuuagacac   ua  c
ag u        a    -     a          uga  ca 


mirna_id: ssc-mir-486-1
hairpin:
-----gcu        a    c       -  cucu     cc 
        ggggcuuc gggc agcucgg ac    gaccu  c
        |||||||| |||| ||||||| ||    |||||  u
        ucccgGAG CCCG UCGAGUC UG    CUggg  g
cgugucac        C    -       A  --UC     ca 


mirna_id: ssc-mir-152
hairpin:
-----------c              g  a    cc    cgg   c 
            ggcccagguucugu au cacu  gacu   gcu u
            |||||||||||||| || ||||  ||||   |||  
            ccgGGUUCAAGACA UA GUGA  CUga   cga g
uuccaggcaggc              G  C    --    ---   g 


mirna_id: ssc-mir-103-2
hairpin:
----u  g      --   u  u           ----    ua 
     gu cuuuca  gcu cu uacagugcugc    cuug  g
     || ||||||  ||| || |||||||||||    ||||  c
     ca gaaAGU  CGG GA AUGUUACGACG    ggac  a
agaau  a      AU   -  C           Aacu    uu 


mirna_id: ssc-mir-181a-2
hairpin:
----         A   U      CU       A    ggga 
    acuccaagg ACA UCAACG  GUCGGUG GUUu    u
    ||||||||| ||| ||||||  ||||||| ||||    u
    ugggguucc ugu aguugc  cagccac caaa    u
uucu         a   c      --       -    aaag 


mirna_id: ssc-mir-181b-1
hairpin:
-       aucAA         CUG          gaa  g 
 ggucaca     CAUUCAUUG   UCGGUGGGUU   cu u
 |||||||     |||||||||   ||||||||||   ||  
 ccggugu     guaaguaac   agucacucga   ga g
c       -caac         --a          aca  u 


mirna_id: ssc-mir-181d
hairpin:
----     aucA         G UG          g  a a g 
    ucaca    ACAUUCAUU U  UCGGUGGGUU ug g c g
    |||||    ||||||||| |  |||||||||| || | |  
    ggugu    UGUAAGUAG G  AGCCACCCag ac c g a
gguc     -CAC         G --          -  - - g 


mirna_id: ssc-mir-27b
hairpin:
-acg                  AUUG        ugac     
    aggugcAGAGCUUAGCUG    GUGAACAg    uggu 
    ||||||||||||||||||    ||||||||    ||| u
    uccaCGUCUUGAAUCGGU    CACUUguu    gccu 
gaag                  --GA        --uc     


mirna_id: ssc-mir-340-1
hairpin:
uaccugg    aU       -CAA      U    g     ug 
       ugug  UAUAAAG    UGAGAC GAUU ucaua  u
       ||||  |||||||    |||||| |||| |||||  c
       auac  auauuuc    acucug cuag ggugu  g
-------    cg       auug      c    -     uu 


mirna_id: ssc-mir-24-2
hairpin:
gacc  cc    g  G   A         UA     ucuca 
    cg  cucc GU CCU CUGAGCUGA  UCAGU     u
    ||  |||| || ||| |||||||||  |||||     u
    gc  gagG CA GGA GACUUGACU  GGUca     u
---a  -u    A  A   C         -C     cacau 


mirna_id: ssc-mir-23b
hairpin:
cuc       u   --          -  c      gugacu 
   uggcugc ugg  guuccuggca ug ugauuu      u
   ||||||| |||  |||||||||| || ||||||       
   accgacg ACC  UAGGGACCGU AC ACUAaa      a
--c       c   AU          U  -      auuaga 


mirna_id: ssc-mir-193a
hairpin:
gcg  a             U     CG   G  A    ggu 
   gg gcugagggcUGGG CUUUG  GGC AG UGAg   g
   || ||||||||||||| |||||  ||| || ||||    
   cc cggcuccUGACCC GAAAC  CCG UC Acuu   u
---  -             U     AU   G  A    ggu 


mirna_id: ssc-mir-99a
hairpin:
-c          A         UC   U      g  aag 
  cauuggcaua ACCCGUAGA  CGA CUUGUG ug   u
  |||||||||| |||||||||  ||| |||||| ||    
  gugacugugu uggguaucu  gcu gaacac gc   g
gu          c         uc   c      -  cag 


mirna_id: ssc-mir-125a
hairpin:
-----g   ucu a UC  UG   C    UA        ----  a 
      gcc   g g  CC  AGA CCUU  ACCUGUGa    gg c
      |||   | |  ||  ||| ||||  ||||||||    ||  
      cgg   c c  gg  ucu ggag  uggacacu    cc a
ggccug   --u - ga  gu   u    --        ggga  u 


mirna_id: ssc-mir-345-1
hairpin:
--           G U          C   U   ug g u 
  aacccaggucu C GACUCCUAGU CAG GCu  u a g
  ||||||||||| | |||||||||| ||| |||  | |  
  uuggguccgGA G CUGGGGAUCA GUC Cgg  g u g
gu           G U          A   C   gu g c 


mirna_id: ssc-mir-148b
hairpin:
---a       uG         U  A    CA    gugg u 
    uuugagg  AAGUUCUGU AU CACU  GGCu    c c
    |||||||  ||||||||| || ||||  ||||    | u
    aagcucU  UUCAAGACA UA GUGA  CUga    g c
ucga       GU         C  C    --    --aa u 


mirna_id: ssc-mir-885
hairpin:
cacucggc   c     c           A  -         cu 
        ccg gcucu UCCAUUACACU CC CUGCCUCUu  c
        ||| ||||| ||||||||||| || |||||||||   
        ggc cgaga AGGUGAUGUGG GG GACGGAgag  c
--------   a     U           -  C         ca 


mirna_id: ssc-mir-365-2
hairpin:
--------aaa        AC   C       -----    U   u 
           aauGAGGG  UUU AGGGGCA     GCUG guu u
           ||||||||  ||| |||||||     |||| |||  
           uUAUUCCU  AAA UCCCCGU     ugac cag c
ugacguucuug        AA   -       AAUac    u   u 


mirna_id: ssc-mir-365-1
hairpin:
-c    ggaaaaug     c           ----   -   uuu 
  gcag        aggga uuuugggggca    gau gug   c
  ||||        ||||| |||||||||||    ||| |||   c
  cguU        UUCCU AAAAUCCCCGU    cua cac   a
cu    -------A     A           AAUa   u   cuu 


mirna_id: ssc-mir-98
hairpin:
gggU                 U    ---------      aggg 
    GAGGUAGUAAGUUGUAU GUUg         uggggu    a
    ||||||||||||||||| ||||         ||||||    u
    uuucaucauucaacaua caau         accccg    u
----                 u    agaagauua      gauu 


mirna_id: ssc-mir-664
hairpin:
gaacauugaaaC     A     AG   U         aa 
            AGGCU GGAGA  UGA UGGAUagaa  u
            ||||| |||||  ||| |||||||||  g
            UCCGA CCUCU  AUU ACUUAUcuu  g
-aaagaaaaACA     C     --   U         au 


mirna_id: ssc-mir-92a-2
hairpin:
cu   a    ug   g     uu  u   u     guggu 
  uuc uccg  ggu gggau  gu gca uacuu     g
  ||| ||||  ||| |||||  || ||| |||||      
  aag aggU  CCG CCCUG  CA CGU AUgaa     u
-a   a    GU   G     UU  -   U     auaug 


mirna_id: ssc-mir-92a-1
hairpin:
-----cu   uac            c   u           uu 
       uuc   acagguugggau ggu gcaaugcugug  u
       |||   |||||||||||| ||| |||||||||||   
       gag   UGUCCGGCCCUG UCA CGUUAUgguau  c
gugguuu   --u            U   -           gu 


mirna_id: ssc-mir-92b
hairpin:
-gc    g     GA       C            uucuu 
   gggc ggAGG  CGGGACG GGUGCAGUGUUg     u
   |||| |||||  ||||||| ||||||||||||     c
   cccg CCUCC  GCCCUGC UCACGUUAUaac     c
ccc    g     -G       -            cgucc 


mirna_id: ssc-mir-192
hairpin:
gca  g g  C         -     A       ugcucuc 
   ca g cu UGACCUAUG AAUUG CAGCCag       a
   || | || ||||||||| ||||| |||||||        
   gu u ga acuggauac uuaac gucgguc       u
---  a g  c         c     c       uccccuc 


mirna_id: ssc-mir-100
hairpin:
aggccuguugc    A   CG    UC   A      c  au 
           caca ACC  UAGA  CGA CUUGUG ug  a
           |||| |||  ||||  ||| |||||| ||   
           gugu ugg  aucu  guu gaacac ac  g
-----gugucu    a   au    gu   c      -  gu 


mirna_id: ssc-mir-208b
hairpin:
-------        g          c   cg        cu 
       cucucagg aagcuuuuug ucg  uuauguuu  c
       |||||||| |||||||||| |||  ||||||||  a
       gggagucU UUUGGAAAAC AGC  AAUAuaag  u
gugagac        G          A   AG        cc 


mirna_id: ssc-mir-374a
hairpin:
------------   c   c                        u 
            cau ggc aUUAUAAUACAACCUGAUAAGUGu a
            ||| ||| ||||||||||||||||||||||||  
            gug cug UAAUGUUAUGUUGGACUAUUCacg c
ccguauauauau   u   U                        a 


mirna_id: ssc-mir-374b
hairpin:
--------------u    ug AU             C       c 
               cgga  g  AUAAUACAACCUG UAAGUGu c
               ||||  |  ||||||||||||| |||||||  
               gccu  U  UAUUAUGUUGGAC AUUCacg u
gcucucgguaucugu    gU AC             U       a 


mirna_id: ssc-mir-34c-1
hairpin:
---     ag     A   A    A     C      C ga 
   agucu  uuacu GGC GUGU GUUAG UGAUUG u  u
   |||||  ||||| ||| |||| ||||| |||||| |   
   uuaga  aaugg ccg caca caauc acuaac a  a
ggu     aa     a   g    c     -      c aa 


mirna_id: ssc-mir-425
hairpin:
a  ug  uu  AAU       U  C    ----    Ag   g 
 ag  cu  gg   GACACGA CA UCCC    GUUG  ugg c
 ||  ||  ||   ||||||| || ||||    ||||  |||  
 uc  ga  CC   CUGUGCU GU AGGG    cgau  acc a
-  gu  -C  -GC       -  A    CUAc    ga   c 


mirna_id: ssc-mir-142
hairpin:
-     g   c           A         Uaa ag a 
 gugca uca cCAUAAAGUAG AAGCACUAC   c  c c
 ||||| ||| ||||||||||| |||||||||   |  |  
 caugu agu GGUAUUUCAUC UUUGUGAUG   g  g u
u     g   a           C         -Ug ga g 


mirna_id: ssc-mir-424
hairpin:
uc       a  C      AA            Agg   uu 
  cgagggg ug AGCAGC  UUCAUGUUUUGA   gcu  a
  ||||||| || ||||||  ||||||||||||   |||   
  gcucccc aU UCGUCG  GAGUGCAAAACu   ugg  a
-c       c  A      CG            ---   ua 


mirna_id: ssc-mir-130b
hairpin:
     c    ca       cc         a  guggg  a 
gccug cuga  cucuuuc  uguugcacu cu     cc c
||||| ||||  |||||||  ||||||||| ||     ||  
cggac gacU  GGGAAAG  GUAACGUGA ga     gg u
     u    AC       UA         C  ----a  g 


mirna_id: ssc-mir-196b-1
hairpin:
    uc      uU       U  C           ucca 
cugg  ggugau  AGGUAGU UC UGUUGUUGGGa    c
||||  ||||||  ||||||| || |||||||||||     
gacu  ucauuA  UCCGUCA AG ACGACAGCucu    c
    --      CU       C  C           cuuu 


mirna_id: ssc-mir-542
hairpin:
-c       g c    GG    UCA         a -  c 
  cucagac u UCGG  AUCA   UGUCACGAg g ac a
  ||||||| | ||||  ||||   ||||||||| | ||  
  gggucug A AGUC  UAGU   ACAGUGUuc c ug c
ga       g A    AA    UAG         a g  u 


mirna_id: ssc-mir-497
hairpin:
       - -----    G    C         U  --   ac 
cccgccc C     AGCA CACA UGUGGUUUG ac  ggc  u
||||||| |     |||| |||| ||||||||| ||  |||   
ggguggg g     uugu gugu acaccaaac ug  ccg  g
       a cgaga    g    c         c  ca   gu 


mirna_id: ssc-mir-450b
hairpin:
--------        UUU     U       UG -    gua 
        aaaauuau   UGCAA AUGUUCC  A AUAu   a
        ||||||||   ||||| |||||||  | ||||   u
        uuuugaUA   ACGUU UACAAGG  U uaug   a
uagcuaug        CCU     U       GU a    aau 


mirna_id: ssc-mir-195
hairpin:
cagcccc     cucUA         -A          ccg   g 
       ccugg     GCAGCACAG  AAUAUUGGCa   ggc g
       |||||     |||||||||  ||||||||||   ||| a
       ggacc     cgucguguc  uuaugaccgu   cug g
-----ac     ----c         gg          ---   a 


mirna_id: ssc-mir-331
hairpin:
uugu       u        U    U       AU ccaga 
    uuggguu guUCUAGG AUGG CCCAGGG  c     u
    ||||||| |||||||| |||| |||||||  |     c
    aauccaa cAAGAUCC UAUC GGGUCCC  g     a
----       c        -    C       CG accaa 


mirna_id: ssc-mir-504
hairpin:
----g    -            G     A    -A  U   u 
     cugu ugggAGACCCUG UCUGC CUCU  UC gua g
     |||| |||||||||||| ||||| ||||  || |||  
     gaca acccuuugggac ggacg gagg  ag cau c
cggga    c            g     c    ga  u   u 


mirna_id: ssc-mir-127
hairpin:
aucg   ucu      ugcug         g  c      --  a 
    cug   ccagcc     aagcucaga gg ucugau  uc g
    |||   ||||||     ||||||||| || ||||||  || a
    ggc   ggUCGG     UUCGAGUCU CC AGGCUa  ag a
----   --u      -----         G  U      cu  a 


mirna_id: ssc-mir-361
hairpin:
---------     UU         --U  A    U    auaa 
         ggagc  AUCAGAAUC   CC GGGG ACuu    u
         |||||  |||||||||   || |||| ||||    u
         cuuCG  UAGUCUUAG   GG CCCC ugaa    u
cuccuccuc     UU         UGU  A    C    aaag 


mirna_id: ssc-mir-1277
hairpin:
u    uc     u            g        ug au 
 agcc  ccaaa auauauauauau uacguaug  u  a
 ||||  ||||| |||||||||||| ||||||||  |   
 uugg  gguUU UAUGUAUAUAUA AUGCAUau  a  u
u    gu     U            G        gu ag 


mirna_id: ssc-mir-1307
hairpin:
------      aucu       -a  u  a   gc   ucuaug 
      cuacca    cgaccgg  cc cg ccg  ucg      u
      ||||||    |||||||  || || |||  |||       
      gaugGU    GCUGGCU  GG GC GGC  Agc      u
cggaua      ----       GC  U  -   UC   uaaccg 


mirna_id: ssc-mir-1306
hairpin:
---------    -c       UCCCCU  A        guga   a 
         gucu  caCCACC      GC AACGUCCA    ugc g
         ||||  |||||||      || ||||||||    |||  
         cagG  GUGGUGG      CG UUGCAggu    aug a
caagccgga    UA       ---UCU  G        ---a   g 


mirna_id: ssc-mir-339-1
hairpin:
----    c   c U C   U    C          uua c 
    gcag cgc g C CUG CCUC AGGAGCUCAC   c u
    |||| ||| | | ||| |||| ||||||||||   |  
    cguc gug C G GAC GGAG UCCUCGAgug   g u
ucuc    u   C C A   C    C          ccg g 


mirna_id: ssc-mir-532
hairpin:
uugcuuu       a  U      A    A   CC  ugg a 
       cucucuu CA GCCUUG GUGU GGA  GU   c u
       ||||||| || |||||| |||| |||  ||   |  
       gggaggA GU CGGAAC CACA CCU  ca   g c
------c       C  U      C    C   CC  uaa u 


mirna_id: ssc-mir-222
hairpin:
ug  c   au              -     auc   ucau 
  cc uca  ggcucaguagccag uguag   cug    u
  || |||  |||||||||||||| |||||   |||    u
  gg agu  CUGGGUCAUCGGUC ACAUC   gac    g
--  u   CU              U     GAu   uaau 


mirna_id: ssc-mir-676-1
hairpin:
-------      u     UU      C     UC    aauu 
       aacgcg gaCUC  CAAUCU AGGAC  GCAu    a
       |||||| |||||  |||||| |||||  ||||     
       uugcgu UUGAG  GUUGGA UCCUG  Cgua    g
cgggucu      c     UU      A     -C    agac 


mirna_id: ssc-mir-342
hairpin:
----       -      --ua      acuga      ugg g 
    aagguga gggugc    ucugug     gggaca   c c
    ||||||| ||||||    ||||||     ||||||   | a
    uuccACU CCCACG    AGACAC     CUCUgu   g u
ccgg       G      CUAA      ----A      caa a 


mirna_id: ssc-mir-708
hairpin:
---     A           A     C  G ----g   aau 
   cccuc AGGAGCUUACA UCUAG UG G     gug   g
   ||||| ||||||||||| ||||| || |     |||   a
   gggAG UCUUCGAGUGU AGAUC AC c     cac   c
gac     A           C     A  g aagua   guu 


mirna_id: ssc-mir-432
hairpin:
-        U     UA       G     a   uu   uu 
 uccaggUC UGGAG  GGUCAUU GGUgg ucc  uau  c
 |||||||| |||||  ||||||| ||||| |||  |||   
 agguUCGG ACCUC  UCGGUAG Ucacc ggg  gua  c
g        U     -C       G     -   -u   uc 


mirna_id: ssc-mir-935
hairpin:
ggc  a      a             ccc  c   caucc 
   gc ggcggc guggcgggagcgg   cu ggc     u
   || |||||| |||||||||||||   || |||      
   cg ccgcCG CAUCGCCUUCGCC   GA Ccg     c
-cu  -      C             AUU  C   ucugc 


mirna_id: ssc-mir-202
hairpin:
-  c       cc         A           g   gu 
 cg cguuccg  UUCCUAUGC UAUACUUCUUU agg  c
 || |||||||  ||||||||| ||||||||||| |||   
 gc gcggggc  AAGGGUACG AUGUGGAGAag ucc  u
a  a       ca         G           -   gg 


mirna_id: ssc-mir-328
hairpin:
--          -------     ga     u     a aaa  g 
  ggagcggggg       ggcag  ggggc caggg g   gu u
  ||||||||||       |||||  ||||| ||||| |   ||  
  ccuugccccc       CCGUC  UCCCG GUCcc c   cg g
gu          UGCCUUC     UC     -     - -gc  u 


mirna_id: ssc-mir-19b-2
hairpin:
--                -  -      uuu    g      u 
  uacaguuaguuuugca gg uuugca   cagc uaugua g
  |||||||||||||||| || ||||||   |||| ||||||  
  guguuAGUCAAAACGU CC AAACGU   GUcg guauau u
ua                A  U      ---    -      g 


mirna_id: ssc-mir-19b-1
hairpin:
cuguu                 -  -      uc    ugugu 
     cuaugguuaguuuugca gg uuugca  cagc     g
     ||||||||||||||||| || ||||||  ||||     a
     ggugucAGUCAAAACGU CC AAACGU  GUcg     u
-----                 A  U      --    ucuua 


mirna_id: ssc-mir-574
hairpin:
uggg            a u                 ug  gc 
    ugcgggcgugug g gugugugugugagugug  uc  u
    |||||||||||| | |||||||||||||||||  ||   
    acgcccgcACAC C CACACACGUACUCGCAC  gg  c
----            - -                 cu  gc 


mirna_id: ssc-mir-1839
hairpin:
--ccuaaaugaaAA      U   AC        uuug a 
              GGUAGA AGA  AGGUCUUG    c a
              |||||| |||  ||||||||    | g
              CCAUCU UUU  UCCAGAac    g a
cacauuaacgACAA      -   CA        uuaa u 


mirna_id: ssc-mir-628
hairpin:
guguca      cA  -   A   A             aaag 
      cuuccu  UG CUG CAU UUUACUAGAGGgu    u
      ||||||  || ||| ||| |||||||||||||     
      gaaggg  gc gac gug gaaugaucuucca    u
-----g      aa  u   g   a             acaa 


mirna_id: ssc-mir-1285
hairpin:
gcugauc  u  -    a  g   c    aaua   ---a   u 
       ag ag uggg uc cgc ugug    gcc    cug a
       || || |||| || ||| ||||    |||    ||| c
       uc uc GCCC AG GCG AUAC    CGG    gac u
---guuu  -  U    C  A   -    --AA   GUCc   c 


mirna_id: ssc-mir-335
hairpin:
cuuu    c        A         C        u  gu 
    uggg gggggUCA GAGCAAUAA GAAAAAUG uu  c
    |||| |||||||| ||||||||| |||||||| ||   
    acuc ccuccagu cucguuauu cuuuuugc aa  a
----    u        c         a        c  au 


mirna_id: ssc-mir-500
hairpin:
----ccc     -u         uac ug    agag   ugu 
       cucuc  aauccuugc   c  ggug    ugc   g
       |||||  |||||||||   |  ||||    |||   u
       gagag  UUAGGAACG   G  CCAC    acg   g
cgagagu     UC         --- GU    -GUA   uaa 


mirna_id: ssc-mir-324
hairpin:
---    gc     C   U C   A     U   U  gaag 
   cuau  cuccc GCA C CCU GGGCA UGG GU    c
   ||||  ||||| ||| | ||| ||||| ||| ||     
   gaug  ggggg cgu g gga cccgu acc ca    u
ucu    uu     u   c u   c     c   -  gagg 


mirna_id: ssc-mir-769
hairpin:
ugc       c UG       U   U   G    gu  ug 
   gcucuga c  AGACCUC GGG UCU AGCu  ga  u
   ||||||| |  ||||||| ||| ||| ||||  ||  u
   ugggacU G  UCUGGGG CUC AGG UCga  cu  g
---       U GU       U   U   G    ac  uc 


mirna_id: ssc-mir-129a
hairpin:
cuu       -       c   cu      ---     acau 
   cgugaau cuuuuug ggu  gggcuu   gcugu    a
   ||||||| ||||||| |||  ||||||   |||||     
   gcgcuUA GAAAAAC CCA  CCCGAA   cgaua    a
--g       C       C   UU      ggc     acuc 


mirna_id: ssc-mir-455
hairpin:
--   c ug  g          U      A   C   gaa 
  ugg g  ag gUAUGUGCCU UGGACU CAU Gug   g
  ||| |  || |||||||||| |||||| ||| |||    
  acu c  uC CAUAUACGGG ACCUGA Gua cac   c
ga   c gu  A          U      C   c   gac 


mirna_id: ssc-mir-505
hairpin:
--  a u   u           g    a        -u  g 
  gc c cag gggggagccag aagu uugauguu  cu c
  || | ||| ||||||||||| |||| ||||||||  ||  
  cg g guc CUCCUUUGGUC UUCA AACUgcga  gg c
ua  a -   U           G    C        uu  a 


mirna_id: ssc-mir-125b-1
hairpin:
----c   u   UC  UG   C           Au     c 
     cuc cag  CC  AGA CCUAACUUGUG  guuua c
     ||| |||  ||  ||| |||||||||||  ||||| g
     gag guc  gg  ucu ggauugggcac  uaaau u
gugcc   c   ga  gu   c           -c     u 


mirna_id: bhv1-mir-B1
hairpin:
   -     -AU   ------    AC   -   -c   -    u      -c  c  g 
gAC ACGAG   CUG      GACG  GAG guc  ucg gcgu ggcggc  gc gg a
||| |||||   |||      ||||  ||| |||  ||| |||| ||||||  || || a
cug uguuc   gac      cugu  cuc cgg  agc cgcg ccgcug  cg cc c
   a     gac   acgaaa    aa   a   ac   a    c      cc  a  g 


mirna_id: bhv1-mir-B2
hairpin:
       C  -U   G  ACG    --         -a   -a   a 
GCCGGCG AU  GUG AG   ggca  gcgcggacg  gcu  cgg g
||||||| ||  ||| ||   ||||  |||||||||  |||  |||  
cggccgc ua  cac uc   ucgu  cgcgccugc  cgg  gcc a
       a  uc   g  --g    ag         ac   ga   g 


mirna_id: bhv1-mir-B3
hairpin:
    ----    -   aa  c  aa  u    a   u 
gcca    cggc cgc  cg gg  ca gcgc cgc g
||||    |||| |||  || ||  || |||| ||| g
cGGU    GUCG GCG  GC CC  gu cgcg gcg a
    AGUA    U   --  A  ac  -    -   c 


mirna_id: bhv1-mir-B4
hairpin:
       C C   A   AGA   U       ---a      
gcgcggc G GUG UGU   GGG GACGcga    cggca 
||||||| | ||| |||   ||| |||||||    |||| g
cgcgccg c cac gcg   ccu cugcgcu    gccgc 
       a -   a   --g   u       cagg      


mirna_id: bhv1-mir-B5
hairpin:
    aC       ------    G  G          ggucg 
ucgg  UCGGAGG      GCUC GA GACGACUCuu     g
||||  |||||||      |||| || ||||||||||      
aguc  agccucc      cggg cu cugcugagaa     a
    -c       acgacu    g  g          gacug 


mirna_id: bhv1-mir-B6
hairpin:
          A  UG    A   G  GA       ---   g 
cgcggagggc AG  CCCG CGC GG  ACGUGgc   ggc g
|||||||||| ||  |||| ||| ||  |||||||   |||  
gcgccuccCG UC  GGGC GCG CC  UGCgccg   ccg a
          G  CU    C   G  UC       cga   c 


mirna_id: bhv1-mir-B7
hairpin:
          c  ga        c  ag   c    c     
cgcggagggc ag  cccggcgc gg  acg ggcg uggc 
|||||||||| ||  |||||||| ||  ||| |||| ||| g
gcgccucccg UC  GGGCUGCG CC  UGC Ccgc gccu 
          U  AC        C  CU   A    c     


mirna_id: bhv1-mir-B8
hairpin:
       GCG   -A      C       ggaua 
cccccgC   GGC  AAAAAU CAAUGGC     a
|||||||   |||  |||||| |||||||      
ggGGGCG   CCG  UUUUUA GUUAUcg     u
       --A   CG      U       agagc 


mirna_id: bhv1-mir-B9
hairpin:
  c u    c        -aaa  u      guuua 
gg c ccag guucgcac    gc caauaa     u
|| | |||| ||||||||    || ||||||     a
cc g gGUC CGAGCGUG    CG GUUauu     u
  a -    C        AGCC  -      auaua 


mirna_id: zma-MIR156l
hairpin:
--        -    -         a      g cgga       cgg 
  gUGACAGA AGAG AGUGAGCAC cggccg g    acggcac   c
  |||||||| |||| ||||||||| |||||| |    |||||||    
  CACUGUCU UCUC UCACUCGug gccggc c    ugccgug   g
cC        A    G         c      g ----       uag 


mirna_id: zma-MIR159e
hairpin:
-- C       -G   C   U  UCga    c    c  u   a     -    agcgcaaguccg 
  g AGCUCCU  CAG AUC GU    ggcu gccg gu cug ugauc cggc            g
  | |||||||  ||| ||| ||    |||| |||| || ||| ||||| ||||            c
  C UCGAGGG  GUU UGG UA    ccgg cggc cg ggc gcugg gccg            g
cA C       AA   -   U  --ug    u    -  c   g     a    gcggcggcagcg 


mirna_id: zma-MIR159f
hairpin:
--        UC   U     U  ag  u  uuc  aa    -   u c   g    u     guuc    uau         uccauguuugcgugucuucgagagga 
  gGAGCUCC  UCA UCCAA GA  gg cc   cg  gggu ggu c gcu cucg ucaug    ccac   ccuaucuca                          a
  ||||||||  ||| ||||| ||  || ||   ||  |||| ||| | ||| |||| |||||    ||||   |||||||||                           
  UCUCGAGG  AGU AGGUU cu  cc gg   gu  ccca cca g cga gagc aguac    ggug   ggauagagu                          g
cG        GA   U     U  cg  -  -uc  gc    g   c u   g    c     guuu    uuc         uuuccgcugguguccuuagagaaggc 


mirna_id: zma-MIR159g
hairpin:
aguuugauucacuagaccugauccccuagacuagacggucuggucuuaag    U           A    UAAa        cu  -u   -   ua     g    u     guuc    ugu        aucagagagagagaagauc 
                                                  gcgG GCUCCCUUCAC CCAA    cggucgau  ga  ggg ugg  cagcu cucg ucaug    ccac   cccaucuc                   a
                                                  |||| ||||||||||| ||||    ||||||||  ||  ||| |||  ||||| |||| |||||    ||||   ||||||||                    
                                                  cGUC UGAGGGAAGUG GGUU    gccaguug  cu  ccc gcu  gucga gagc aguac    ggug   ggguagag                   u
--------------------------------------------------    U           A    Uguc        --  uc   u   cc     g    c     guuu    uuc        uucguagagagcgagagag 


mirna_id: zma-MIR159h
hairpin:
--  U           A    UAAa        cu  -u   -   ua     g    u     guuc    ugu         ucagagagagagaagauc 
  gG GCUCCCUUCAC CCAA    cggucgau  ga  ggg ugg  cagcu cucg ucaug    ccac   cccaucuca                  g
  || ||||||||||| ||||    ||||||||  ||  ||| |||  ||||| |||| |||||    ||||   |||||||||                   
  UC CGAGGGAAGUG GGUU    gccaguug  cu  ccc gcu  gucga gagc aguac    ggug   ggguagagu                  u
cG  U           A    Uguc        --  uc   u   cc     g    c     guuu    uuc         ucguagagagcgagagag 


mirna_id: zma-MIR159i
hairpin:
aguuugauucacuagaccugauccccuagacuagacggucuggucuuaag    U           A    UAAa        cu  -u   -   ua     g    u     guuc    ugu        aucagagagagagaagauc 
                                                  gcgG GCUCCCUUCAC CCAA    cggucgau  ga  ggg ugg  cagcu cucg ucaug    ccac   cccaucuc                   a
                                                  |||| ||||||||||| ||||    ||||||||  ||  ||| |||  ||||| |||| |||||    ||||   ||||||||                    
                                                  cGUC CGAGGGAAGUG GGUU    gccaguug  cu  ccc gcu  gucga gagc aguac    ggug   ggguagag                   u
--------------------------------------------------    U           A    Uguc        --  uc   u   cc     g    c     guuu    uuc        uucguagagagcgagagag 


mirna_id: zma-MIR159j
hairpin:
aguuugauucacuagaccugauccccuagacuagacggucuggucuuaag    U           A    UAAa        cu  -u   -   ua     g    u     guuc    ugu         ucagagagagagaagauc 
                                                  gcgG GCUCCCUUCAA CCAA    cggucgau  ga  ggg ugg  cagcu cucg ucaug    ccac   cccaucuca                  g
                                                  |||| ||||||||||| ||||    ||||||||  ||  ||| |||  ||||| |||| |||||    ||||   |||||||||                   
                                                  cGUC CGAGGGAAGUU GGUU    gccaguug  cu  ccc gcu  gucga gagc aguac    ggug   ggguagagu                  u
--------------------------------------------------    U           A    Uguc        --  uc   u   cc     g    c     guuu    uuc         ucguagagagcgagagag 


mirna_id: zma-MIR159k
hairpin:
--  U           A    UAAa        cu  -u   -    a  a  g    u     guuc    ugu         ucagagagagagaagauc 
  gG GCUCCCUUCAA CCAA    cggucgau  ga  ggg uggu ca cu cucg ucaug    ccac   cccaucuca                  g
  || ||||||||||| ||||    ||||||||  ||  ||| |||| || || |||| |||||    ||||   |||||||||                   
  UC CGAGGGAAGUU GGUU    gccaguug  cu  ccc gcua gu ga gagc aguac    ggug   ggguagagu                  u
cG  U           A    Uguc        --  uc   u    c  c  g    c     guuu    uuc         ucguagagagcgagagag 


mirna_id: zma-MIR160g
hairpin:
--    C       C          a   -   gc    c cgu 
  aUGC UGGCUCC UGUAUGCCAc cau gua  ccaa c   g
  |||| ||||||| |||||||||| ||| |||  |||| |    
  UACG ACCGAGG ACGUGCGgug gug cgu  gguu g   a
uG    A       A          g   u   -a    a ugu 


mirna_id: zma-MIR164e
hairpin:
--       -A  A                      uuc    --c       cuc   g 
  gUGGAGA  GC GGACACGUGAGcgaccauccag   cacu   ccgcugg   gcu c
  |||||||  || ||||||||||||||||||||||   ||||   |||||||   ||| u
  CACCUCU  CG CCUGUGUACuugcugguggguu   gugg   ggcggcc   cga g
gC       CC  -                      uga    uuc       -cu   g 


mirna_id: zma-MIR164f
hairpin:
--c        C  G         -  c    -aa  -  ----a    u    g a 
   UGGAGAAG AG GCACGUGCU cg cgac   gu cg     agcc uagg c g
   |||||||| || ||||||||| || ||||   || ||     |||| |||| | c
   ACCUCUUC UC CGUGCACga gc gcug   ca gc     ucgg gucc g u
aCA        C  G         c  u    gug  u  gcacg    u    g u 


mirna_id: zma-MIR164g
hairpin:
--u        CA            a  cacgcc     --     cgccgccgaucuaccgaccucccaaaccugccuuaugguguggg 
   UGGAGAAG  GGGCACGUGCAg ga      ggagc  acggc                                            g
   ||||||||  |||||||||||| ||      |||||  |||||                                             
   ACCUCUUC  CUCGUGCACguc cu      ccucg  uguug                                            g
aCC        CC            -  ------     au     uagcuucguuguugcugucgauagcgaagguggcugcuggaggu 


mirna_id: zma-MIR164h
hairpin:
--         C            aauucauu   u -      -   u     --   gacucacgcaucgccggcgcggcgagcugagcgcgugacacggaaagcagguccgcc 
  gUGGAGAAG AGGGCACGUGUG        cgu c caucga cgg cuggc  gcc                                                         g
  ||||||||| ||||||||||||        ||| | |||||| ||| |||||  |||                                                          
  UACCUCUUC UCCCGUGUACgu        gcg g guagcu gcc ggccg  cgg                                                         c
gC         U            --------   u c      a   -     ac   accgaaacgaagcaccucgaugucaaucggccagcuagccggucgcgcccgcggccg 


mirna_id: zma-MIR166n
hairpin:
--       UU      CU  GU            -  y   cuug   g 
  gGGAUUG  GUCUGG  CG  Gucuccggucga ga ggc    ccg c
  |||||||  ||||||  ||  |||||||||||| || |||    |||  
  CCCUAAC  CGGACC  GC  uagaggccagcu cu ucg    ggc g
uU       UU      AG  Uc            g  g   ---a   c 


mirna_id: zma-MIR167j
hairpin:
--            G          aa  aua  u      --   uuc   --   ga 
  aUGAAGCUGCCA CAUGAUCUGa  cc   cg guucuu  uga   cca  ucu  a
  |||||||||||| ||||||||||  ||   || ||||||  |||   |||  |||   
  UACUUUGACGGU GUACUAGacu  gg   gc caagag  acu   ggu  aga  g
uU            -          --  -ca  -      gu   uuc   ug   aa 


mirna_id: zma-MIR169l
hairpin:
--     C                   uuccu    uu  ca   caa 
  gUAGC AGGGAUGAUUUGCCUGugg     gucg  gc  ugc   u
  ||||| |||||||||||||||||||     ||||  ||  |||    
  CAUCG UCCCUACUAAACGGgcauc     uagc  ug  aug   g
gC     -                   -----    -u  uc   ucc 


mirna_id: zma-MIR169m
hairpin:
--              CU    U   -     u    ug        a    g 
  uUAGCCAAGAAUGG  UGCC Auc uccau auuu  uucaucgc ggaa c
  ||||||||||||||  |||| ||| ||||| ||||  |||||||| ||||  
  AAUCGGUUCUUACC  ACGG uag aggug uaaa  agguagug ccuu c
uG              -U    -   u     -    gu        -    c 


mirna_id: zma-MIR169n
hairpin:
--           U        U   -     --u  uug uu    - ug  ag 
  uUAGCCAAGAA GGCUUGCC Auc uccac   gu   g  cguc u  gg  a
  ||||||||||| |||||||| ||| |||||   ||   |  |||| |  ||  c
  AAUCGGUUCUU CCGGACGG uag aggug   ca   u  guag a  cc  c
cG           -        -   u     ugu  -ug gg    u gu  ca 


mirna_id: zma-MIR169o
hairpin:
--------------------gUAGCCAAGAAUGACUUGCCU  g      -------   - g   -    uu     c g  g 
                                         Au cacgcc       cuc u uug gcag  ccguc g ca c
                                         || ||||||       ||| | ||| ||||  ||||| | ||  
                                         ua gugcgg       gag g aac cguu  ggcag c gu c
acCGAUCGGUUCUUCUGGACGGcuacgucgguguaacguag  g      cguuuuu   u g   a    --     - g  a 


mirna_id: zma-MIR169p
hairpin:
--      AA               auua  u 
  gUAGCC  GGAUGACUUGCCGGc    ua u
  ||||||  |||||||||||||||    || u
  CAUCGG  UCUACUGAACGGccg    gu c
cG      GG               cccg  u 


mirna_id: zma-MIR169q
hairpin:
--       A   U        U   -     u    g      -  ucuu    g 
  uUAGCCA GAA GGCUUGCC Auc uccau auuu guccau cu    ggga a
  ||||||| ||| |||||||| ||| ||||| |||| |||||| ||    ||||  
  AAUCGGU CUU CCGGACGG ugg aggug uaag uaggug gg    cccu c
uG       -   -        -   u     -    g      u  uacu    c 


mirna_id: zma-MIR169r
hairpin:
-- C         UG          uauuuu a    -     u  cag   ag  --ua g   u 
  g AGCCAAGGA  ACUUGCCGGg      g gcau gcaug ua   ggg  ca    u caa c
  | |||||||||  ||||||||||      | |||| ||||| ||   |||  ||    | ||| u
  C UCGGUUCCU  UGAACGGccu      c cgug cgugc au   ccc  gu    a guu g
uA A         GU          -ucugu -    g     c  --a   ga  uuua g   u 


mirna_id: zma-MIR171l
hairpin:
--           C          ag         a     
  gUAUUGGCGUG CUCAAUCCGA  gcguggcug cugg 
  ||||||||||| ||||||||||  ||||||||| ||| c
  UAUAACUGCGC GAGUUAGGuu  uguaccgac ggcg 
uC           C          cu         -     


mirna_id: zma-MIR171m
hairpin:
--           C          ag         aua au 
  gUAUUGGCGCG CUCAAUCCGA  gcguggcug   g  u
  ||||||||||| ||||||||||  |||||||||   |  g
  UAUAACUGCGC GAGUUAGGuu  uguaccgac   c  g
uC           C          cu         -gg gc 


mirna_id: zma-MIR171n
hairpin:
--         A         C      a         a 
  aUAUUGGUG GGUUCAAUC GAuguu gguuuuaca a
  ||||||||| ||||||||| |||||| ||||||||| a
  UAUAACCGC CCGAGUUAG cuauga cuaaaaugu g
uC         G         U      -         c 


mirna_id: zma-MIR390a
hairpin:
-- A         G         Cua   aaacac     u        -   --gc        --a     --        ga      u   g 
  g AGCUCAGGA GGAUAGCGC   gga      auaga cggagccg gcc    gaggagaa   gaaag  agccaaga  uaugug gau a
  | ||||||||| |||||||||   |||      ||||| |||||||| |||    ||||||||   |||||  ||||||||  |||||| ||| a
  C UCGAGUCCU UCUAUCGCg   ucu      uaucu gucuuggu cgg    cuccucuu   uuuuc  ucgguucu  guacau cua u
cA C         A         aag   ---aac     -        g   aggu        gug     ga        ag      -   a 


mirna_id: zma-MIR393b
hairpin:
--g                         auuccuuccauuuuuucaugcauggc 
   UCCAAAGGGAUCGCAUUGAUCCauc                          u
   |||||||||||||||||||||||||                           
   AGGUUUUCCUAGCGUAACUAgguag                          g
cGG                         cuguucaggaacgucugcugcuucug 


mirna_id: zma-MIR393c
hairpin:
--c           C        CUaac    ---cga   ac  -  -  g 
   UCCAAAGGGAU GCAUUGAU     cugc      ucg  gc cg ac u
   ||||||||||| ||||||||     ||||      |||  || || ||  
   AGGUUUCCCUA CGUGACUG     gacg      agc  cg gc ug a
uUA           A        -acua    aacagg   -c  u  a  c 


mirna_id: zma-MIR395d
hairpin:
--      AUG               -  a  gu 
  aGUUCU   CAAGCACUUCACGAg gc uu  u
  ||||||   ||||||||||||||| || ||   
  UCAAGG   GUUUGUGAAGUGuuu cg ga  u
uC      -GG               u  a  ac 


mirna_id: zma-MIR395e
hairpin:
--        U              gag     -au  aaauaac 
  aGUUCCCU CAAGCACUUCACAU   gcacc   uc       a
  |||||||| ||||||||||||||   |||||   ||        
  UCAAGGGG GUUUGUGAAGUGua   cgugg   ag       c
uC        -              ---     auu  aacuuua 


mirna_id: zma-MIR395f
hairpin:
--    A  UA       G  U    accu      a 
  aGUU CC  CAAGCAC UC CGAu    uggcuu a
  |||| ||  ||||||| || ||||    |||||| u
  UCAA GG  GUUUGUG AG Guug    accgga a
uC    -  GG       A  U    ----      a 


mirna_id: zma-MIR395i
hairpin:
--        A               accu      a 
  aGUUCCCU CAAGCACUUCACGAu    uggcuu a
  |||||||| |||||||||||||||    |||||| u
  UCAAGGGG GUUUGUGAAGUGuug    accgga a
uC        -               ----      a 


mirna_id: zma-MIR395k
hairpin:
--        U             ----------Ug    a    gu 
  aGUUUCCU CAAGCACUUCACA            gagc uucu  c
  |||||||| |||||||||||||            |||| ||||  u
  UCAAAGGA GUUUGUGAAGUGu            uucg aaga  u
uC        -             uacguuauuuaa    a    ga 


mirna_id: zma-MIR395l
hairpin:
--       U             C    aggccaugcacaa 
  aGUUCCU CCAAACACUUCAC Agcu             g
  ||||||| ||||||||||||| ||||              
  UCAAGGA GGUUUGUGAAGUG ucgg             a
uC       -             a    auuacacccaagu 


mirna_id: zma-MIR395m
hairpin:
--        U                a cu     uu    g 
  aGUUCCUU CAAACACUUCACAUgg g  ucuca  ggug a
  |||||||| |||||||||||||||| |  |||||  ||||  
  UCAAGGAG GUUUGUGAAGUGugcc c  agagu  uuau u
uC        -                - --     uc    a 


mirna_id: zma-MIR395n
hairpin:
--        A               -    cgu 
  aGUUCUCU CAAGCACUUCACGAg gcuu   a
  |||||||| ||||||||||||||| ||||    
  UCAAGGGG GUUUGUGAAGUGuuu cgag   c
uC        -               u    agu 


mirna_id: zma-MIR395o
hairpin:
-----aGUUCUCUUCAAGCACUUCACGAggcaucacacuga   c   ug           -               u     aucauuugcauuugcuugauguuagucaugca 
                                         gag uuu  ugaaguguuug ggggaacucuuggug cacaa                                c
                                         ||| |||  ||||||||||| ||||||||||||||| |||||                                 
                                         uuc aga  acuucacgaac ucccuugaggaucau guguu                                c
uCUCAAGUGGGUUUGUGAAGUGuuaccgggaaauaauucag   c   gu           a               u     uugcaacgguacaggaaauagaguauagugua 


mirna_id: zma-MIR395p
hairpin:
--        U              gag    -cau  --     ac 
  aGUUCCCU CAAGCACUUCACAU   gcac    uc  aaaug  a
  |||||||| ||||||||||||||   ||||    ||  |||||  a
  UCAAGGGG GUUUGUGAAGUGua   ugug    ag  uuuac  c
uC        -              --a    uauu  aa     cu 


mirna_id: zma-MIR396e
hairpin:
--       A          A       uucuucucucucuuagaagggccguauagcuucuuugaaccucucucucucucuc 
  uUUCCAC GCUUUCUUGA CUUcuuc                                                       u
  ||||||| |||||||||| |||||||                                                        
  AAGGGUG CGAAAGAACU Gaagaag                                                       c
aG       C          G       ccucuagucucucgcucuccgucucuuacuucuuucacaagcacaugugaaaacu 


mirna_id: zma-MIR396f
hairpin:
--                  A    u     uucuucucucuuggaacggcagcuuuc 
  uUUCCACAGCUUUCUUGA CUUc ucuuc                           u
  |||||||||||||||||| |||| |||||                           u
  AAGGGUGUCGAAAGAACU Gaag agaag                           c
aG                  G    c     ccucuacucucucucucucugucuaag 


mirna_id: zma-MIR396g
hairpin:
--uUC          A         cc  u   u   uuggaucaauugaaacucga 
     CCACAGCUUU UUGAACUGc  uc ugc ugc                    u
     |||||||||| |||||||||  || ||| |||                    c
     GGUGUCGAAA AACUUGacg  ag acg acg                    a
uAGAA          G         -u  u   u   ucguccgacacgacaccugg 


mirna_id: zma-MIR396h
hairpin:
-------------------------uUC          A           gcaccugcugaugcggguggagg 
                            CCACAGCUUU UUGAACUGcau                       a
                            |||||||||| |||||||||||                       g
                            ggugucgaaa aacuugacgua                       u
cauuagucuaccggaagaaacacuagaa          g           gagagucuccucgccgucgaagu 


mirna_id: zma-MIR397a
hairpin:
-  CAU       -    UUG     g ggagcauguacgucuucccgggcuucacuuucagcuugaacgu 
 gU   UGAGCGC AGCG   AUGau c                                           g
 ||   ||||||| ||||   ||||| |                                           u
 CA   ACUCGCG UUGC   Uacua g                                           c
U  AUU       A    CGA     a aaauaugauugaguauagguaugaauacuauacguacgugcgu 


mirna_id: zma-MIR397b
hairpin:
--aUC      C         A      a     cgu   ucc 
     AUUGAG GCAGCGUUG UGagcc gccgc   gcc   c
     |||||| ||||||||| |||||| |||||   |||   c
     UAACUC CGUCGCGAC acucgg cggcg   cgg   u
cGCAU      A         C      -     --u   cug 


mirna_id: zma-MIR398a
hairpin:
------------gGGGGCGAACUGAGAACACAUGagaaua ug       auugcuc  cu  -    ac      u c 
                                        a  agaugag       gc  cg cggu  gguucg g u
                                        |  |||||||       ||  || ||||  |||||| |  
                                        u  ucuacuu       cg  gc gcca  ccaggu c g
cGCCCCCGCUGGACUCUUGUGUacgucguaauaauacgca gu       -----gc  cu  u    --      c g 


mirna_id: zma-MIR398b
hairpin:
--       GA             ggaaugaga        u   u  g   u  u   c 
  gGGGGCG  CUGGGAACACAUG         ugagauca ugc cg ucg gc ggc u
  |||||||  |||||||||||||         |||||||| ||| || ||| || |||  
  CCCCCGC  GACUCUUGUGUac         guucuagu gcg gc ggc ug ccg g
gG       UG             ---------        u   c  -   -  -   g 


mirna_id: zma-MIR399g
hairpin:
--a      CC    G        ----ugcg   g 
   GGGCAA  CCCC UUGGCAGG        acg c
   ||||||  |||| ||||||||        |||  
   CCCGUU  GGGG AACCGUcc        ugc g
cGG      UA    A        caucccca   a 


mirna_id: zma-MIR399h
hairpin:
--  U           C     -C   ccaa     -a -ca   u   c 
  aG GCAGUUCUCCU UGGCA  Gaa    ggcug  g   gcu gcc c
  || ||||||||||| |||||  |||    |||||  |   ||| |||  
  UC CGUUAAGAGGA ACCGU  cuu    ccggc  c   cga cgg a
cG  C           A     uc   ---c     ag acc   u   u 


mirna_id: zma-MIR399i
hairpin:
--  U           C      Gag    cgacu    -   ac   c 
  aG GCGGCUCUCCU UGGCAU   ggcg     gaga ggc  gaa a
  || ||||||||||| ||||||   ||||     |||| |||  |||  
  UC CGUUGAGAGGA ACCGUa   ccgu     cucu ccg  cuu g
cG  C           A      --a    ----c    u   gu   u 


mirna_id: zma-MIR399j
hairpin:
---A            C       - ag       gucaucgucgccaucgacgacgguugcuuggcucugcuaugcuguguucguuc 
    GGCAGCUCUCCU UGGCAGG c  gcgcgcg                                                     g
    |||||||||||| ||||||| |  |||||||                                                     u
    CCGUUGAGAGGA ACCGUcc g  ugcgcgc                                                     c
cGUC            A       u ca       acguacgugcguacaaugugacguuacguacgugccgaucgaucgugugguac 


mirna_id: zma-MIR408b
hairpin:
--ga      C       A   U   u       cau    agaauuccaaauuugauuucuguuugcucgcuc 
    CAGGGA GAGGCAG GCA GGg agggggc   caac                                 a
    |||||| ||||||| ||| ||| |||||||   ||||                                 c
    GUCCCU CUCCGUC CGU ccc ucccucg   guug                                 a
cuCG      U       A   C   -       -uu    cggacucacacaaacaccacucagggagguaaa 


mirna_id: zma-MIR482
hairpin:
--        - UG      CCUU  --au   --u   accgccggaggagcgcucgccuucu 
  agUGGGAG A  AAGGAG    gc    cga   guc                         u
  |||||||| |  ||||||    ||    |||   |||                         c
  UUACCCUC U  UUCCUU    cg    gcu   cag                         g
uu        C UG      --CU  cucc   ccc   gcucccgccgauaacgccgccacgc 


mirna_id: zma-MIR528a
hairpin:
-            U   G     g  cac   c    uguggcuggaagaagcagccggggcc 
 gUGGAAGGGGCA GCA AGGAG ag   gag gagg                          u
 |||||||||||| ||| ||||| ||   ||| ||||                           
 UACCUUCUCCGU CGU UCCuc uc   cuc cucc                          g
U            C   G     -  ---   a    ucucgaacgcuccccauauaucgugu 


mirna_id: zma-MIR528b
hairpin:
-            U   G     cacg       u  g 
 gUGGAAGGGGCA GCA AGGAG    aacgagg gu g
 |||||||||||| ||| |||||    ||||||| || u
 UACCUUCUCCGU CGU UCCuc    uugcucc cg u
U            C   G     ucga       c  g 


mirna_id: zma-MIR529
hairpin:
--            A          -   gc   guac     -----   a  uc      cucu 
  gAGAAGAGAGAG GUACAGCCUu guu  cau    acacu     cag ua  aacagu    u
  |||||||||||| |||||||||| |||  |||    |||||     ||| ||  ||||||    a
  UUCUUCUCUCUC CAUGUCGgaa uag  gug    uguga     guc au  uugucg    u
uC            C          g   ua   -acc     uuauu   c  ca      uuua 


mirna_id: zma-MIR827
hairpin:
-gu                           gcuucgaucgauggauuggugcaugcaugg 
   UUUGUUGGUGGUCAUUUAACCaugcau                              a
   |||||||||||||||||||||||||||                              u
   AAACGACUACCAGUAGAUUgguacgug                              u
uAC                           acuacgcgguguacguagugugauacguua 


mirna_id: zma-MIR1432
hairpin:
-   -    A           G  gc         -----    c a 
 gCU CAGG GAGAUGACACC AC  cagacggac     cggu c u
 ||| |||| ||||||||||| ||  |||||||||     |||| |  
 CGA GUCC CUCUACUGUGG ug  gucugccug     gccg g c
A   A    G           G  aa         ucugu    c c 


mirna_id: zma-MIR390b
hairpin:
-- A         G         Cua   ------a    c c      u      ac  a  -   --a       u a                       
  g AGCUCAGGA GGAUAGCGC   gga       auca a auagau ggagcc  ga ga gga   gggagaa g gagagagagagacagagcagcu 
  | ||||||||| |||||||||   |||       |||| | |||||| ||||||  || || |||   ||||||| | ||||||||||||||||||||| a
  C UCGAGUCCU UCUAUCGCg   ccu       uagu u uaucug ucuugg  cu cu ccu   uucucuu c cucucucucucugucucgucgu 
cA C         A         aag   agcuaag    a a      -      aa  -  a   agg       u a                       


mirna_id: osa-MIR2907a
hairpin:
    a     cucucc    --a      ca  a 
gagc gcucu      gccc   cuuggc  cc c
|||| |||||      ||||   ||||||  ||  
uucg cggGG      CGGG   GAGCCG  GG g
    a     ---CUC    AGC      AC  c 


mirna_id: osa-MIR2907b
hairpin:
    accuc    ucc    --       ca  a 
gagc     uccc   gccc  gcucggc  cc c
||||     ||||   ||||  |||||||  ||  
cucg     ggGG   CGGG  CGAGCCG  GG g
    ---ac    CUC    AG       AC  u 


mirna_id: osa-MIR2907c
hairpin:
      CAGCC   C -A             aagccgcgggagagc 
gcgcGG     GAG G  GGGCCUCGGggcg               c
||||||     ||| |  |||||||||||||                
cgcgcc     cuc c  cccggagccccgu               c
      -----   c cc             acugcagugggggag 


mirna_id: osa-MIR2907d
hairpin:
   gc     uaucucca   a   --   c   a 
gag  acccc        ccc cgc  ggc gcc c
|||  |||||        ||| |||  ||| |||  
cuc  uggGG        GGG GCG  CCG CGG a
   aa     ----CUCC   A   AG   A   u 


mirna_id: sbi-MIR162
hairpin:
--  gc    u            uc     u  c    ---  u   ccagaa    ug    uuc 
  gg  gcag gguuuaucgauc  uuccu gc uugu   gc agu      guag  gugg   a
  ||  |||| ||||||||||||  ||||| || ||||   || |||      ||||  ||||   a
  CC  CGUC CCAAAUAGCUag  aaggg cg aaca   cg uca      cguc  uauu   g
GA  UA    U            cu     -  c    aaa  u   --auaa    gu    ugc 


mirna_id: sbi-MIR169o
hairpin:
a     AA              ---u    a  u  ga         -    c 
 UAGCC  GGAUGAUUUGCCUG    agca cc cu  gugcuccug cugc a
 |||||  ||||||||||||||    |||| || ||  ||||||||| ||||  
 aucgg  ucuacuaaacgggc    ucgu gg ga  cgcgaggac gacg u
g     -g              cucu    g  u  ac         u    g 


mirna_id: sbi-MIR169p
hairpin:
--       A   U    U   U   -     u    g        -      cc 
  uUAGCCA GAA GGCU GCC Auc uccau auuu guucauca gaggga  u
  ||||||| ||| |||| ||| ||| ||||| |||| |||||||| ||||||  c
  aaucggu cuu ccga cgg uag aggug uaaa uagguagu cucccu  u
ug       -   c    -   -   u     -    g        a      ag 


mirna_id: sbi-MIR169q
hairpin:
--              CU    U   -     u    ug     --    g agg 
  uUAGCCAAGAAUGG  UGCC Auc uccau auuu  uucau  cgau c   c
  ||||||||||||||  |||| ||| ||||| ||||  |||||  |||| |    
  aaucgguucuuacc  acgg uag aggug uaaa  aggua  gcua g   c
ug              -u    -   u     -    gu     cu    g gau 


mirna_id: sbi-MIR172f
hairpin:
--                  a   -      aacaccguugggugggugcaguuaccca 
  gcggcaucaucaggauuc cac cgggua                            u
  |||||||||||||||||| ||| ||||||                            g
  CGUCGUAGUAGUCCUAAG gug guucgu                            c
CA                  A   c      ugucuaucucggucuggacguauauaca 


mirna_id: sbi-MIR398
hairpin:
--       ga             g a ug  -    g  ---auu    --    g 
  gggggcg  cugggaacacaug g a  ag agau ag      gcuc  gguc u
  |||||||  ||||||||||||| | |  || |||| ||      ||||  |||| g
  CCCCCGC  GACUCUUGUGUac u u  uc ucua uu      cggg  ccgg c
cG       UG             g a gu  g    g  gaugcu    uc    u 


mirna_id: sbi-MIR399k
hairpin:
--a      cc    a        -  c acc 
   gggcaa  cucc uuggcagg ug g   u
   ||||||  |||| |||||||| || |    
   CCCGUU  GGGG AACCGUcc au c   a
cGG      UA    A        c  c cac 


mirna_id: sbi-MIR528
hairpin:
--           U   G     ---  -      -----     u 
  UGGAAGGGGCA GCA AGGAG   ca cgaggc     uuggc g
  ||||||||||| ||| |||||   || ||||||     ||||| g
  accuucuccgu cgu uccuc   gu gcuccg     agccg a
uu           c   g     ucg  c      caucc     a 


mirna_id: osa-MIR2918
hairpin:
-----a  --    uuca       agaa     gauuauug      cugcaauuuuguugcacacuucugaugcuggagacagcugg 
      gu  aagc    ugggcaa    ggaug        gcaagc                                         g
      ||  ||||    |||||||    |||||        ||||||                                          
      ca  UUCG    GUCUGUU    CCUAc        cguuug                                         a
uaggaa  AU    ---C       -GUG     ---auaua      aaugguacaaggguccuucgacccgugaguucccauaagaa 


mirna_id: osa-MIR2919
hairpin:
gcggggagccgaugggccgcg         -   g    -         agugggccgagccggcccaagagggAAGGGGGGG 
                     ggagaggag aga agag ggagagggg                                  G
                     ||||||||| ||| |||| |||||||||                                  G
                     cuuuucuuu uuu uuuc ccuuuuucc                                  G
---------guuuauuauuaa         a   g    a         aaauauuuuucuuuuuaguuuuucaggAGAAAGG 


mirna_id: osa-MIR2920
hairpin:
caagaggguuccuaaaauauuauagacaaaacaagucacuacauaauacauauaagcagauacagaaacaaguuuauuguccuauaccaaauuucaaaauucAAACAACAAUAUAACAUUUCAAAuauuagc    uuacau  -        acuauuca 
                                                                                                                                    uagu      ug gguauuca        a
                                                                                                                                    ||||      || ||||||||         
                                                                                                                                    auca      ac ccauaggu        u
--------------------------------------------------------------------------------------------------------------gaccgguaaccgguuuaccacu    ---uau  g        gccacaaa 


mirna_id: osa-MIR2921
hairpin:
----------------------------------auAAGAACUUAAUAUAACUUUAAAGCaa    a   uaa     ag gcag       auacaauuaagcauaugauauuagaauagcuaaaucagguaag 
                                                              uaag ucu   uauaa  g    auuuagc                                           a
                                                              |||| |||   |||||  |    |||||||                                           u
                                                              auuc aga   auauu  c    uagaucg                                           c
agaacaaaucuagaaugucaauaaaauauacgaauuacaacguagccaacucaagcuagaua    a   uag     aa acua       aacaaaauacuaguaaauaucucuaucauagccucaaagucgg 


mirna_id: osa-MIR2922
hairpin:
uaauaauaug       --   -ag  g        cu   uccaAAUA   GAU    -GAAA    u  ucc   c 
          uguucuu  ccc   au uagcuuuu  ugu        AGU   UACC     UUca gu   uca a
          |||||||  |||   || ||||||||  |||        |||   ||||     |||| ||   |||  
          acaagga  ggg   ua gucgggaa  acg        uca   gugg     aagu cg   agu a
-----uucua       uu   aga  a        --   ----uaua   -ac    acaac    -  -uc   g 


mirna_id: osa-MIR2923
hairpin:
--------------------------------------------------------------------------------uuacAGACAAAAA    AA AA   --A  aaua  cg c      c 
                                                                                             UAUA  U  CAA   ga    aa  c uuguac u
                                                                                             ||||  |  |||   ||    ||  | |||||| a
                                                                                             auau  a  guu   cu    uu  g aacaug c
uuuuuaguggauauggacuaucacugugaguuuacgcaauaggucuacagggaagcauagaccucauacaaguauuauccguccauaccacga    aa gg   gaa  aagg  aa a      a 


mirna_id: osa-MIR2924
hairpin:
ugucaucguccucugcagccuuaccccucguuugu  c     c    ccugcua   -au   u u  a  uca 
                                   gc guggu gccg       gag   gcg g gg gc   g
                                   || ||||| ||||       |||   ||| | || ||    
                                   cg CACCG CGGC       CUC   CGC C cc cg   c
----------------------cguccggccgccu  c     C    -------   GUU   U -  -  uuc 


mirna_id: osa-MIR2925
hairpin:
----------------------------uucu   c   -   cuU   -G    C  -   UC  c    -u     
                                uga gcc gcc   GGC  GCCG GG GCU  GU gccg  cuca 
                                ||| ||| |||   |||  |||| || |||  || ||||  ||| c
                                acu ugg cgg   cug  cggu cc cgg  cg cggu  gagu 
uucguagucuucuuaccgaagagacuuccggc   u   a   --c   aa    u  u   -c  a    uc     


mirna_id: osa-MIR2926
hairpin:
guggugccucacgagcucacguacugcugugaggau  -ucg       C   G -     CUccu     cacg 
                                    gg    AGGUCGU GAC U UGGUG     gccgu    c
                                    ||    ||||||| ||| | |||||     |||||     
                                    cc    ucuagca cug a accac     cggua    a
---------------------------uugucuguu  ucua       -   g c     --cac     acac 


mirna_id: osa-MIR2927
hairpin:
----ug       c  c ag   gaag         auguc        acuUGUCGUCGUCGAUGGAGCCCAUGaagcgu 
      ucgcggc gg g  cau    cugacgacg     gcggaggu                                g
      ||||||| || |  |||    |||||||||     ||||||||                                 
      agcgccg cc c  gua    ggcuguugc     cgccuucg                                a
ugcgcg       -  u ca   ----         -----        aaccgccgcgacgguggccgucgcuggaggaa 


mirna_id: osa-MIR2928
hairpin:
uuuuauuuu  aa       c       guuaaaaaaaaaugaaggucagacgucccagguuuugauuaaaagcuuccaaaauuuuaaguucuacaAAGAA 
         gg  ugaaggu agacuuu                                                                         G
         ||  ||||||| |||||||                                                                          
         cc  auuucua uuuggaa                                                                         A
----ggucu  ag       c       aaaaaggauuguuuaaucuuuuaucucguauacuacaggucuuuauggacguuuacacuaGUUGUUUUACAGC 


mirna_id: osa-MIR2929
hairpin:
ggcggagccaugaauuuuugucauguggggc       aa   uuc       aa     -  -------a      --c      u 
                               cgacuau  uac   acauuuu  uggga uc        uuuaug   aaaucu a
                               |||||||  |||   |||||||  ||||| ||        ||||||   ||||||  
                               guugAUA  GUG   UGUGGGA  ACUCu ag        aaguac   uuuagg a
------------------------------u       AA   -UU       --     c  aauuuuaa      aca      u 


mirna_id: osa-MIR2930
hairpin:
------------------------------------------------------------------------------------------------------------------------------c    cu   cugau    cu   -u    
                                                                                                                               gcgc  cgc     gcuc  ucc  ccg 
                                                                                                                               ||||  |||     ||||  |||  || g
                                                                                                                               cgcg  gcg     cgag  ggg  ggc 
gggaggggaaaauuuaagagugcgggugggcguuagcggcguuugauguuucgcucgguuugaaacgggguguggguuCCGGUGCGCGCUCUCUUCUCUUaagcgguuaagccuccguuuuuagguu    cu   ----u    uc   uc    


mirna_id: osa-MIR2931
hairpin:
----------------------------aaaaaa      --u  cc     --u   uu  a ug     uuuauguCUUU         GUCAAA 
                                  caaugu   ug  acuuc   uua  uu u  augca           AUUGUUGAU      A
                                  ||||||   ||  |||||   |||  || |  |||||           |||||||||      a
                                  guuaua   au  ugaag   gau  aa a  uacgu           uggcgacua      u
uaccucccccaaguauuaacaugguguucauaua      uau  au     uuc   uu  a gu     -----------         gcuauu 


mirna_id: osa-MIR2932
hairpin:
aaagaguauauuaaaucucu     -u     a   a u     ---------aagc   acca   aacu     --     gc 
                    caucg  uucuc ugu g gugca             agg    ggg    uacuu  augcg  u
                    |||||  ||||| ||| | |||||             |||    |||    |||||  |||||  a
                    guagu  gagag aca c cacgu             UCC    CCC    AUGAg  uaugc  c
-----------------cau     uc     c   - -     auaaaccaaaCUA   AUCA   --GU     cg     aa 


mirna_id: rlcv-mir-rL1-14-2
hairpin:
caccu   -    gg        GA          C  UU    u  uu 
     gcc cucc  cugggUCG  CGGUCUGGUG GC  GAUg gu  u
     ||| ||||  ||||||||  |||||||||| ||  |||| ||  u
     cgg gagg  gacuCAGC  GUCGGACUAC CG  CUac ca  a
guucc   u    -a        AA          A  --    -  ug 


mirna_id: rlcv-mir-rL1-17
hairpin:
   g  -    g    c       C  C  G    UG ACUug   u 
cau cc cgug uguu UGAUGGA AG GG GAAG  C     ugc u
||| || |||| |||| ||||||| || || ||||  |     |||  
gua gg gcac auAA ACUACCU UC CC CUUC  g     aug a
   -  a    a    U       C  -  G    GU -gcua   u 


mirna_id: rlcv-mir-rL1-18
hairpin:
        g   U       U     C   GUAU      au 
aggugugg guu AGAUGAU GGGGG GGC    cuuuug  u
|||||||| ||| ||||||| ||||| |||    ||||||   
uuuacacc caG UCUACUA CCCUC CCG    gaaaau  u
        a   U       C     C   -AUU      gg 


mirna_id: rlcv-mir-rL1-19
hairpin:
     u      uUA       C U     U    - c    uu 
ucagg guggaa   UAGAUAG G GGGUG GUGA c uugu  g
||||| ||||||   ||||||| | ||||| |||| | ||||  u
agucc caccuu   GUCUGUC C CCCAC CACU G aaca  u
     u      -UC       - -     -    A a    ca 


mirna_id: rlcv-mir-rL1-20
hairpin:
  a  g      uu      -  UA     U   GU         Ca    g 
gc uu accuug  gguuac cu  AAGGG AGU  GGUUCACAG  guuu u
|| || ||||||  |||||| ||  ||||| |||  |||||||||  |||| g
cg ag ugggac  ccaaug GA  UUCCC UCA  CUAGGUGUc  caaa a
  -  g      --      U  --     U   AU         --    a 


mirna_id: rlcv-mir-rL1-21
hairpin:
    ------        c    UU               G    --   a 
ggcu      gagcugug aguu  GAUUGUGGGGGGAGG CUCU  cuu u
||||      |||||||| ||||  ||||||||||||||| ||||  |||  
ccga      cucgacac uuAA  UUAACACUCUUCUCC GAga  gga c
    agaccu        u    UC               G    uc   u 


mirna_id: rlcv-mir-rL1-22
hairpin:
au   u  cu     u    u         -            uu   u 
  agu au  aggcu gaua uCGUGGGGG GAAACGGUGGAu  ugg g
  ||| ||  ||||| |||| ||||||||| ||||||||||||  ||| u
  ucg ua  uuugg uuaU AGCACCCCU CUUUGCCACUua  auu a
uc   u  ac     c    U         A            uu   g 


mirna_id: rlcv-mir-rL1-23
hairpin:
u    gug gg           A       U    C    G uaac 
 ggcu   g  gcuggguauUC CUAGUGC GGCA CUAA A    u
 ||||   |  ||||||||||| ||||||| |||| |||| |     
 cuga   c  uggcuuaUGAG GGUCACG CUGU GAUU u    a
a    aga uu           A       U    U    g uaag 


mirna_id: rlcv-mir-rL1-24
hairpin:
   g      cc    -C         C      A     --   u 
cgu cgggug  cugg  UCAAGUUCU AUUUCC AUACA  guu g
||| ||||||  ||||  ||||||||| |||||| |||||  |||  
gua gcccgu  gacC  AGUUCAGGA UAGAGG UAUgu  caa a
   -      uu    AU         -      C     uc   g 


mirna_id: rlcv-mir-rL1-25
hairpin:
    augaugu      u   ggU         --       GAA   auaau 
gggg       ggcugc gcu   GCUAGACCC  UAAAUUG   ACa     a
||||       |||||| |||   |||||||||  |||||||   |||     g
cccc       cugacg ugA   UGAUCUGGG  AUUUAAC   Ugu     u
    ----ggu      u   ---         UA       -AG   cuuag 


mirna_id: rlcv-mir-rL1-26
hairpin:
   u   -    C      -  U   A     ucau 
cgc ggc GCUA ACCCGG GA UCG AGCag    u
||| ||| |||| |||||| || ||| |||||    g
gcg uuG CGAU UGGGCC CU AGC Ucguc    g
   -   A    U      U  U   A     uccg 


mirna_id: rlcv-mir-rL1-27
hairpin:
  ag  ac   g          U     C   C  -  uu 
gg  ug  ccg aGCCGCCUCC UGGUU UGU CA ca  u
||  ||  ||| |||||||||| ||||| ||| || ||   
cc  ac  ggc UUGGUGGAGG ACCAA ACA gu gu  u
  -g  gu   G          U     U   C  c  ug 


mirna_id: rlcv-mir-rL1-28
hairpin:
      ccgga     -ug   U        U    ----         u 
guggac     gaguc   ucu GGAAGGCG UGCU    UUCAGCUGu u
||||||     |||||   ||| |||||||| ||||    |||||||||  
uaccug     uucgg   AGA UCUUCCGC AUGA    AGguuggua a
      -----     uua   -        U    AAGG         u 


mirna_id: rlcv-mir-rL1-29
hairpin:
gcu    --c          aaC        -             -a ua 
   gagu   cguguccuaa   CAGUCCCA GCAGACAAAACAu  g  u
   ||||   ||||||||||   |||||||| |||||||||||||  |   
   cuca   gcgcgggauu   GUCAGGGU CGUUUGUUUUgug  c  g
-ug    aau          GAC        U             ag ug 


mirna_id: rlcv-mir-rL1-30
hairpin:
ca    ---g  -    uc      -    U         U        uug 
  ggaa    cc cgug  cuggcA CCGG CCUUUGAGG ACGAAACA   u
  ||||    || ||||  |||||| |||| ||||||||| ||||||||   g
  cuuu    gg guac  gacuGU GGCU GGAAGCUUU UGCUUUgu   a
-g    uaga  u    gu      C    -         -        uug 


mirna_id: rlcv-mir-rL1-31
hairpin:
u       aau       C       C    -   G    uugug 
 gccgggu   gcccggU GCUUACG CGAC CGC UAAC     g
 |||||||   ||||||| ||||||| |||| ||| ||||      
 cggccca   cgggcCG CGAAUGC GCUG GCG AUug     u
g       --g       A       U    U   G    uuaua 


mirna_id: rlcv-mir-rL1-32
hairpin:
        u UAA           -   -      uaac 
uggugucc g   CUUACUACUGC CGC UUUACA    g
|||||||| |   ||||||||||| ||| ||||||     
aucgcagg c   GGAUGAUGACG GCG AAAUgu    u
        u uGC           A   U      ucga 


mirna_id: rlcv-mir-rL1-33
hairpin:
     -  uc   a C   G           - C     u  a 
gugga cu  cag c AUU UCUUCAUUUGC C UUGCg gu c
||||| ||  ||| | ||| ||||||||||| | ||||| || a
cgccu ga  guc G UAA GGGGGUAAACG G AAcgu ca u
     u  gu   c A   G           A A     -  g 


mirna_id: ctr-MIR156
hairpin:
-------------------------------------------ugaagaggaagaggaaacauaacgagagagcua            -         a   ag    uu     a 
                                                                            cUGACAGAAGAG AGUGAGCAC cgc  guaa  guauu g
                                                                            |||||||||||| ||||||||| |||  ||||  |||||  
                                                                            gacugucuucuc ucgcucgug gug  cguu  uauaa a
acuaucuuccuucucguuuucucccgacccccaaugcugcacgaccccaacacuccuucgugaacguuuuuacugc            c         c   ga    uc     a 


mirna_id: csi-MIR160
hairpin:
auuauac     uc        -    -auu      C       CU          ug a   -   a    a 
       cuaug  uauauauu uaua    auguGC UGGCUCC  GUAUGCCAUu  c gag uca ucga a
       |||||  |||||||| ||||    |||||| |||||||  ||||||||||  | ||| ||| ||||  
       gauac  auauauaa augu    uauacg accgagg  uaugcgguag  g cuc ggu agcu c
---uaua     cc        u    accu      u       ag          gu c   c   -    a 


mirna_id: csi-MIR164
hairpin:
------------------------------------------------------------------------------------gugua ag  a     A    C          CAuuac         cgcacauacau   c      aaauuaauuaauccacacauuuugaaga 
                                                                                         g  ca gaUGG GAAG AGGGCACGUG      uaacucaac           cua uaacaa                            a
                                                                                         |  || ||||| |||| ||||||||||      |||||||||           ||| ||||||                            a
                                                                                         c  gu cuacc cuuc ucccguguac      auugaguug           gau auuguu                            c
accguguacuuaaaacgauucuucuuuaagucuagaacucgacuagggacuacuaugugucuguguguguguguguguguuccacggcg ca  a     c    u          uucuuu         aguacugacuc   -      gucuuucucgaacgacgaagaacuaaac 


mirna_id: csi-MIR166e
hairpin:
-g      uuuu   u   a        UU      CU   G   a   --cuu     -   auuaauuuuacguauucucucauagau 
  gggagc    ugu uug ggGGAAUG  GUCUGG  CGA Gac cua     guuga ucc                           c
  ||||||    ||| ||| ||||||||  ||||||  ||| ||| |||     ||||| |||                           u
  ucuucg    aua aac CCCCUUAC  CGGACC  GCU cug ggu     cgacu agg                           a
ua      --uu   u   c        UU      AG   g   c   uuauu     u   cauauaacaauaggugguaagucuacg 


mirna_id: ctr-MIR166
hairpin:
                                                                                                                                                                                                                                                                                          uagu  a  uuuuuca  auu   uc  uuuguuua                              a
                                                                                                                                                                                                                                                                                          ||||  |  |||||||  |||   ||  ||||||||                               
                                                                                                                                                                                                                                                                                          guca  u  agaaagu  uaa   gg  agacgagu                              u
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------    gu uu       ag   ugu  uu        accgguuacugguucuagagaggcaacugg 


mirna_id: ccl-MIR167a
hairpin:
cauau      -    g      u            C        Aa        -  ccu 
     ucgugc acua uaguag UGAAGCUGCCAG AUGAUCUG  cuuuccuu ga   c
     |||||| |||| |||||| |||||||||||| ||||||||  |||||||| ||    
     gguacg uggu guuauc acuuugacgguc uacuagac  gaaaggga cu   c
agacc      a    a      c            -        cg        u  cua 


mirna_id: ccl-MIR168
hairpin:
gu    gg       ua     C          U     A ug   g  uagu       ug -a   uu  gac    a gu   guguu 
  uacc  cggucuc  auUCG UUGGUGCAGG CGGGA c  auu gc    uuuuuuu  a  auu  uu   agcg g  ggc     g
  ||||  |||||||  ||||| |||||||||| ||||| |  ||| ||    |||||||  |  |||  ||   |||| |  |||      
  gugg  gccagag  uaagu aacuacguuc gcccu g  uaa cg    aaaaaaa  u  uaa  aa   uugc c  cug     u
--    -a       gc     c          c     a gu   g  ---u       gu ag   uu  -au    a ug   guuaa 


mirna_id: csi-MIR169
hairpin:
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aucaagugcuaccuuauauacagaauagaaagaauaacaa       --aaauug    -        uuau    ag     a u  a   ucua   C        A       -Ac gc    a 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  agguugg        gucu aggguuuc    auga  ggaua a ag gga    GAG CAAGAAUG CUUGCCG   g  auug c
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  |||||||        |||| ||||||||    ||||  ||||| | || |||    ||| |||||||| |||||||   |  ||||  
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  uccaacc        cagg ucucagag    uacu  ucuau u uc ccu    cuc guucuuac ggacggc   c  uaau c


mirna_id: ccl-MIR171
hairpin:
gauc  uu        --aa        u      ac     ---     gauggauggguacucacgggauauuggugcgguucaauaagaaaacggugcucaauacuuuuugagcuccgcuuuuUGAUUGAGCCGCGCCAAUAUCacgugccacucgcucu 
    uc  ggggguua    augaagau guggug  cauuu   uggag                                                                                                                 c
    ||  ||||||||    |||||||| ||||||  |||||   |||||                                                                                                                 u
    ag  uucccagu    uauuuuug uacuac  guaga   accuc                                                                                                                 a
-uua  cu        auug        u      --     uuu     gguuaacuugucauuuuaaauuugucuucguuauucgaucuuaaaauuaaauuuggggaugaauggacuggaguuguauuaaugcgcgaggggacacgaauuuucuuucguua 


mirna_id: csi-MIR172a
hairpin:
gucaccuuaaaac        c       a        C         A   --c   -ucua      aa     c   uuu 
             agucguug ucgcugu GCAGCGUC UCAAGAUUC CAu   cag     aaggca  agcag aau   u
             |||||||| ||||||| |||||||| ||||||||| |||   |||     ||||||  ||||| |||    
             ucaguaau agcggca CGUCGUAG AGUUCUAAG gug   guu     uuccgu  ucguu uua   c
-aacaaccaucga        u       A        U         A   acu   uuugg      --     u   cuu 


mirna_id: ctr-MIR319
hairpin:
-uua   --        uu          cu      u   aa            a -  g   ac       uc  aa    uaguaaa    cgaa 
    agc  ugggagcu  cuucggucca  uauggg ggc  uaggauuuaauu g cu cug  ucauuca  ca  uacu       gggu    a
    |||  ||||||||  ||||||||||  |||||| |||  |||||||||||| | || |||  |||||||  ||  ||||       ||||     
    ucg  aCCCUCGA  GAAGUCAGGU  gugucc ucg  auucuaaguuaa c ga ggc  aguaagu  gu  auga       ccca    u
ucgc   uu        GG          Uc      u   -a            a a  g   gu       ga  aa    -------    uagg 


mirna_id: ccl-MIR396
hairpin:
agagugguccuugaaauagccucuuuguaugggcuuccugcuuaauucuuccucucuaacaucgaguguaaaaugaauggaagaucaucaagccacagauaugagaucugaacauuauuauuauuaaguccuggucaugcuuUUCCACAGCUUUCUUGAACUUccacuguuugcugauuaauac     --     cu    ----a     -  ua  u 
                                                                                                                                                                                        acggc  ucuug  agcu     ggcgc cg  ug a
                                                                                                                                                                                        |||||  |||||  ||||     ||||| ||  ||  
                                                                                                                                                                                        ugucg  agaac  ucga     ccgcg gc  ac g
-----------------------------------------------------------------------------------------------------------------------------------------------------------guuuaggacuuccacacgguacaagaggg     aa     --    gggua     c  -c  a 


mirna_id: csi-MIR398
hairpin:
------------------------------------------------------caacagaug    ac        a    u          g      g        uaaauuugauuugcauugcugcugccugcu 
                                                               ugaa  cccagagg guga ccugagaaca agggug cguuggcu                              c
                                                               ||||  |||||||| |||| |||||||||| |||||| ||||||||                              c
                                                               acuu  ggguUUCC CACU GGACUCUUGU Uuccac gcaaccgg                              u
acuuagucuucgucgcuuacaaucucguuaacucauugaacuacugugcacgacuaacuguua    aa        C    -          G      -        uguauguuagaaaaacuaaauuacauaccg 


mirna_id: ctr-MIR164
hairpin:
---------------------------------------------------------------------------------------gaagguguguguagag  a     A    C          CAuuac         cgcacauacau   c     aaaauuaauuaauccacacauuuugaaga 
                                                                                                       ca gaUGG GAAG AGGGCACGUG      uaacucaac           cua uaaca                             a
                                                                                                       || ||||| |||| ||||||||||      |||||||||           ||| |||||                             a
                                                                                                       gu cuacc cuuc ucccguguac      auugaguug           gau auugu                             c
aaaccauccgaaaucuaaccguguacuuaaaacgauucuucuuuaagucuagaacucgacuagggacuacuaugugugugugugugcguguuccacggcgcca  a     c    u          uucuuu         aguacugacuc   -     ugucuuucucggaggacgaagaacuaaac 


mirna_id: ctr-MIR171
hairpin:
                                                                                                                                                                                                                                                                                     guuugggg    aug  gg   ucauuuu   g
                                                                                                                                                                                                                                                                                     ||||||||    |||  ||   |||||||   u
                                                                                                                                                                                                                                                                                     caaacucc    uau  uc   agugaag   u
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------caacaaggacggccggaccucacucacuua        cuuu   gu  aaa       uaa 


mirna_id: ccl-MIR167b
hairpin:
---------------------------------------------------------------------------------------auu     -    g      u            C        Aa        -  ccu 
                                                                                          cgugc acua uaguag UGAAGCUGCCAG AUGAUCUG  cuuuccuu ga   c
                                                                                          ||||| |||| |||||| |||||||||||| ||||||||  |||||||| ||    
                                                                                          guacg uggu guuauc acuuugacgguc uacuagac  gaaaggga cu   c
cuauggacaaagaucccaaaaaguagacgguuuuggaugacccaaacaacucuugcuagaccaccuccucuucuuuaaucccaaagaccg     a    a      c            -        cg        u  cua 


mirna_id: crt-MIR166a
hairpin:
uucccuucagaaucaaauucauuguuugauuuuuuuu      ---uua               uu      cu     g    c     ---uuu  a       uc   cuuucuuucu 
                                     gagagg      ugguugaugggaaug  guuugg  cgagg ucau uaggu      ca aauuuuc  gga          u
                                     ||||||      |||||||||||||||  ||||||  ||||| |||| |||||      || |||||||  |||           
                                     cucucu      gccaacUGCCCUUAC  CGGACC  GCUcu agug auccg      gu uuaaaag  ccu          g
-----------------------------------uu      uuggca               UU      AG     -    u     uuuauu  a       ga   uuuuauuuuc 


mirna_id: crt-MIR166b
hairpin:
uauauguucucaucuggguuagcuuaggguuuugagagcaggaagccaugaaagucgauggaugggagaaa     --   u           c  uu      cu      -----auua  a            a 
                                                                       aauga  uug uucugagggga ug  gucugg  cgaugc         au auaauuauaauu u
                                                                       |||||  ||| ||||||||||| ||  ||||||  ||||||         || ||||||||||||  
                                                                       uuacu  aac aagacUUCCCU AC  CGGACC  GCUaug         ua uauuaauauuaa a
-------------------------------------------------------------------uuug     ua   u           U  UU      AG      ggaaaaaag  c            u 


mirna_id: crt-MIR168
hairpin:
---------------------ag     gg       ua     C          U     A ug   g  uagu       ug -a   uu  gac    a gu   guguu 
                       uuacc  cggucuc  auUCG UUGGUGCAGG CGGGA c  auu gc    uuuuuuu  a  auu  uu   agcg g  ggc     g
                       |||||  |||||||  ||||| |||||||||| ||||| |  ||| ||    |||||||  |  |||  ||   |||| |  |||      
                       agugg  gccagag  uaagu aacuacguuc gcccu g  uaa cg    aaaaaaa  u  uaa  aa   uugc c  cug     u
uuccauuuauagguagguuagag     -a       gc     c          c     a gu   g  ---u       gu ag   uu  -au    a ug   guuaa 


mirna_id: crt-MIR171
hairpin:
aauaugacaggaauaugcaggaugcuggaaucuuguuuccuaucuuuuggggguuaaaaugaagauuguggugaccauu      ga  ga   guaca   g        ug         a     a   u      ua 
                                                                               uuggag  ug  ugg     acg gauauugg  cgguucaau agaaa cgg gcucaa  c
                                                                               ||||||  ||  |||     ||| ||||||||  ||||||||| ||||| ||| ||||||   
                                                                               aaucuc  gc  acc     ugc CUAUAACC  GCCGAGUUA Uuuuu gcc cgaguu  u
-------------------------------------------------------------------------------      uc  uc   ----g   a        GU         G     c   u      uu 


mirna_id: csi-MIR162
hairpin:
aaacuguuuacacugaucugugcugcugauaaaucuuaauuuuuuuuuuugaauuuuuauuuaacagaa       --a      a u a     G    C    C       ac  ug  caa       u  gaa 
                                                                     aauagag   gaguga g c cUGGA GCAG GGUU AUCGAUC  uu  ug   auuuugu gu   a
                                                                     |||||||   |||||| | | ||||| |||| |||| |||||||  ||  ||   ||||||| ||    
                                                                     uuaucuc   cucacu c g GACCU CGUC CCAA UAGCUag  aa  ac   uaaaaca ca   a
--------------------------------------------------------------------c       aac      - - c     A    U    A       cu  gu  --a       -  aua 


mirna_id: csi-MIR166a
hairpin:
-------     uu  ucuu   a        uu      cu   g c        -----------     uu    -uua        -    ca  u    guuucauu 
       gaagc  uu    uug ggggaaug  gucugg  cga g cacuaacu           agauc  ugau    aucucagu ugau  ua auuu        u
       |||||  ||    ||| ||||||||  ||||||  ||| | ||||||||           |||||  ||||    |||||||| ||||  || ||||        u
       cuucg  aa    aac CCCCUUAC  CGGACC  GCU c gugauuga           ucuag  acua    uagaguua auua  au uaaa        u
cgucuau     uu  ---u   C        UU      AG   g a        auuaauagaau     uu    ccca        u    --  u    auaccuuc 


mirna_id: csi-MIR166b
hairpin:
cacgcguccgauuguuugauuuuuuuu      ---uua               uu      cu     g    c     ---uuu  a       uc   cuuucuuucu 
                           gagagg      ugguugaugggaaug  guuugg  cgagg ucau uaggu      ca aauuuuc  gga          u
                           ||||||      |||||||||||||||  ||||||  ||||| |||| |||||      || |||||||  |||           
                           cucucu      gccaacUGCCCUUAC  CGGACC  GCUcu agug auccg      gu uuaaaag  ccu          g
-------------------------uu      uuggca               UU      AG     -    u     uuuauu  a       ga   uuuuauuuuc 


mirna_id: csi-MIR390
hairpin:
------------------aa     a      u    u          G           ugg     augaauauggga    ucu 
                    aguaa gaagaa cugu AAGCUCAGGA GGAUAGCGCCa   gugcc            auga   a
                    ||||| |||||| |||| |||||||||| |||||||||||   |||||            ||||   g
                    ucauu cuucuu ggua uuugaguccu ccuaucgcggu   cacgg            uacu   g
cucggcuagagcucucucuc     -      c    c          a           ---     -guaauaaauag    uug 


mirna_id: bma-bantam
hairpin:
-----      -     ua   c     c       a    aug uau 
     gguggg ggcag  ggc uucac augaucu caga   c   c
     |||||| |||||  ||| ||||| ||||||| ||||   |   a
     ccaucu ccguu  UCG AAGUG UACUAGA GUcu   g   u
cucug      u     UA   A     U       -    -ga uuu 


mirna_id: bma-let-7
hairpin:
augcuaac   ccu  a      -     u  aU   G          U      ---a   -gu    
        gac   ga ugauag cuugc cg  GAG UAGUAGGUUG AUAGUU    uga   ugu 
        |||   || |||||| ||||| ||  ||| |||||||||| ||||||    |||   || a
        cug   cu acuauc gggcg gc  uuc aucguccgac ugucaa    gcu   acc 
-----ccc   --c  -      u     u  cg   g          c      agag   aau    


mirna_id: bma-lin-4
hairpin:
aaa     cuugc     ucU       -AC    -    C   a  a 
   gaaag     gaccu   CCCUGAG   CUCU GCUG GAc gu c
   |||||     |||||   |||||||   |||| |||| ||| || g
   cuuuc     cugga   gggacuc   gaga cgac cug cg u
-ag     -----     ccu       cau    a    a   -  g 


mirna_id: bma-mir-2a
hairpin:
------------uucuc             -    ca        --ucg a 
                 cgacacgucaaag uggu  gugaugug     c a
                 ||||||||||||| ||||  ||||||||     | a
                 guugUGUAGUUUC ACCG  CACUAUac     g a
uacccagcuguucgcgu             G    -A        uuaaa u 


mirna_id: bma-mir-2b-1
hairpin:
--------------ga     a          --       a  uu   ugau 
                gcggu guuguaucgg  cugugau ug  gua    u
                ||||| ||||||||||  ||||||| ||  |||    g
                cgucA CGACGUAGCC  GACACUA ac  cgu    g
gcccucaucguguuca     G          CA       c  -u   uguu 


mirna_id: bma-mir-2b-2
hairpin:
--------------ga     a        --         a  uu  murru 
                gcggu guuguauc  gucugugau ug  gu     u
                ||||| ||||||||  ||||||||| ||  ||     g
                cgucA CGACGUAG  CAGACACUA ac  cg     g
gcccucaucguguuca     G        CC         c  -u  uuguu 


mirna_id: bma-mir-2c
hairpin:
----------caaauc          u    -   uu     a   uguaa 
                ucgugagccg aucg gcu  guggu cau     u
                |||||||||| |||| |||  ||||| |||      
                agcgCUCGGC UAGC CGA  CACUA gua     u
uacuuuuuaauuguga          U    A   --     C   uuggc 


mirna_id: bma-mir-7
hairpin:
aaaaguuaaa   ga  a      A  -    U     --       uaua 
          gcu  cc ggUGGA GA CUUG GAUUU  UGUUGUu    c
          |||  || |||||| || |||| |||||  |||||||    a
          cgg  gg ccaccu cu gagc cuaaa  acaacga    u
--------ua   -a  c      -  c    -     cg       cuuu 


mirna_id: bma-mir-9
hairpin:
      caa   ua       U        G     -  a    
guauug   cuu  CUUUGGU AUCUAGCU UAUGA gu agu 
||||||   |||  ||||||| |||||||| ||||| || || u
cauaac   gaa  gaaacca uggaucga auacu cg uca 
      -ac   uc       u        a     u  g    


mirna_id: bma-mir-34
hairpin:
---------ccaaau  --g    uuu      -        -    U     G     agc 
               ac   ggga   accggg UGGCAGUG UGGU AGCUG UUGUc   a
               ||   ||||   |||||| |||||||| |||| ||||| |||||   u
               ug   uccu   uggucc gccgucac acua ucggc aacag   a
uguccuucuacgacu  aaa    -uu      u        u    -     -     gcu 


mirna_id: bma-mir-36a
hairpin:
---------------uag    u         c    a    a    ---   a 
                  cuau cgggauagu ucuc cggu gagc   uug a
                  |||| ||||||||| |||| |||| ||||   ||| a
                  gauA GCCUUGUUA AGAG GCCA CUcg   aac a
cugccuuuacauggcaug    C         C    -    -    uuu   u 


mirna_id: bma-mir-36b
hairpin:
------------uaa    u         c    a    a    ---    ga 
               cugu cgggauagu ucuc cggu gagc   uuga  a
               |||| ||||||||| |||| |||| ||||   ||||   
               gauA GCCUUAUUA AGAG GCCA CUcg   aacu  u
cccuuacaugguaug    C         C    -    -    uua    aa 


mirna_id: bma-mir-50
hairpin:
gcacuuccugca         -             U  U  UG     ugc 
            uaugcagug uUGAUAUGUCUGA AU CU  GGUUg   a
            ||||||||| ||||||||||||| || ||  |||||    
            augugucac ggcuaugcagacu ua ga  ccaac   a
----------uu         c             c  c  --     uga 


mirna_id: bma-mir-57
hairpin:
cuuuuu    -uu    guc     U   GU     GC     C  agu 
      gagc   guuc   UACCC GUG  ACCGA  UGUGU Ug   g
      ||||   ||||   ||||| |||  |||||  ||||| ||   a
      cucg   cagg   auggg cac  uggcu  gcaca ac   u
-----u    uuc    -aa     u   --     -a     a  gaa 


mirna_id: bma-mir-71
hairpin:
agcaugcu   ugu   u           U         ---   g  a a 
        gug   cgg ggUGAAAGACA GGGUAGUGA   gac uu g a
        |||   ||| ||||||||||| |||||||||   ||| || | u
        cac   gcu ccgcuuuuugu cuuaucacu   cug aa c u
--------   uau   -           -         aug   g  - u 


mirna_id: bma-mir-72
hairpin:
ucaugggacacgggacaA   AA     U     A     acaugauaacgauuaggcucuaguu 
                  GGC  GAUGU GGCAU GCUGA                         u
                  |||  ||||| ||||| |||||                          
                  ccg  uuaca ccgug cgacu                         a
----------------ua   ga     -     a     ucgagauacguuuaacuaauccgag 


mirna_id: bma-mir-79
hairpin:
      caa   ua       u        g     -  a    
guauug   cuu  cuuuggu aucuagcu uauga gu agu 
||||||   |||  ||||||| |||||||| ||||| || || u
cauaac   gaa  GAAACCA UGGAUCGA AUAcu cg uca 
      -ac   UC       U        A     u  g    


mirna_id: bma-mir-87a
hairpin:
------------a        -      gg    c a    a    ag auu 
             gugcucgg cgccug  acuu g cuca ccua  u   u
             |||||||| ||||||  |||| | |||| ||||  |    
             cgcgagcU GUGGAC  UGAA C GAGU Ggau  g   u
ccuuuuacgcuuc        U      UU    A -    -    gu aac 


mirna_id: bma-mir-87b
hairpin:
-----------        cc       c   ca u    a   -  ga 
           uucgcaau  cgccuga acu  g cuca ccu cu  u
           ||||||||  ||||||| |||  | |||| ||| ||  g
           aggcguua  GUGGACU UGA  C GAGU Gga gg  u
caaaccauuga        cU       C   AA -    -   a  au 


mirna_id: bma-mir-92
hairpin:
cauacu   -    u  g        a u  uu    c    caga    a u 
      gca cuaa ca ucaggucg g cg  ugca uauu    caga g u
      ||| |||| || |||||||| | ||  |||| ||||    |||| | c
      cgu gauu gu agUCCGGC C GC  ACGU AUag    guuu c a
uauuau   c    -  g        C U  UC    U    --cg    a u 


mirna_id: bma-mir-100a
hairpin:
cggcauggcggcugu     A     U  UU    A         a au 
               cgguu ACCCG AG  UCGA CAUGUGuug u  a
               ||||| ||||| ||  |||| ||||||||| |   
               guuaa ugggc uc  ggcu guacacaau g  u
-------gaucauuc     c     -  uu    -         a au 


mirna_id: bma-mir-100b
hairpin:
gugugaggua    a     A     UAGAU    A  UG    ga  uu 
          gcac cgguc ACCCG     CCGA CU  UGuu  ga  u
          |||| ||||| |||||     |||| ||  ||||  ||   
          ugug gucag ugggc     ggcu ga  acaa  cu  u
----------    c     a     -uuac    g  gu    gc  uc 


mirna_id: bma-mir-100c
hairpin:
guuuu     A     U     U   A       u au 
     cgauc ACCCG AGAAC GAA UCGUGuu g  u
     ||||| ||||| ||||| ||| ||||||| |  u
     guuag ugggc ucuug cuu agcacaa c  u
cguuc     c     -     u   -       - gu 


mirna_id: bma-mir-100d
hairpin:
--u  ug       a cUA     A CU    A       g ga a 
   gu  gugugug c   CCCGU G  CCGA UAUGUGu g  c a
   ||  ||||||| |   ||||| |  |||| ||||||| |  | a
   ca  uacacac g   gggca c  ggcu auacaca c  g u
agu  gu       c aaa     - cu    -       a ac u 


mirna_id: bma-mir-124
hairpin:
--------   -       cuc  u       -   a       -   uu 
        caa aggacgu   gc uucaccg gug ccuuggu uug  a
        ||| |||||||   || ||||||| ||| ||||||| |||  u
        guu ucuugca   CG AAGUGGC CAC GGAAUca gau  g
uccauauc   c       AAC  U       G   -       u   uu 


mirna_id: bma-mir-133
hairpin:
u        caag  a   uau  c   cauuu     c       u  uc  a    a   uuauau 
 ugauugga    gu ugc   ga gga     acaua cugguug ag  ga ccaa uug      u
 ||||||||    || |||   || |||     ||||| ||||||| ||  || |||| |||      u
 auugaucu    ca aug   cu ccu     uguAU GACCAAC UC  CU GGUU aac      u
a        ---a  a   -uc  -   --cuu     C       U  CC  -    -   uaaaau 


mirna_id: bma-mir-137
hairpin:
------------     g   -  g   ag        c          -   aaa 
            gguuc cuu gg aau  guauucuc aguaaugaca uug   u
            ||||| ||| || |||  |||||||| |||||||||| |||   u
            ccaag gaa cu uua  CAUAAGAG UCGUUAUUgu agc   g
accguccaugag     a   a  g   aA        U          u   gaa 


mirna_id: bma-mir-153
hairpin:
-----uuc    ---    g            g    -      --   u 
        cgcu   cguc aucauuuuugug auua gcaauu  uug u
        ||||   |||| |||||||||||| |||| ||||||  |||  
        gcga   gcag UAGUGAAAACAC UGAU CGUUaa  agc c
uguuugcu    agu    G            -    A      ua   u 


mirna_id: bma-mir-228
hairpin:
    g     ua   A    C   A A     U     uucacc 
ugcu gcaca  cuc AUGG ACU G UGAAU CACGG      u
|||| |||||  ||| |||| ||| | ||||| |||||       
auga cgugu  gag uacc uga c gcuua gugcc      c
    a     -c   a    u   c -     u     uauccu 


mirna_id: bma-mir-236
hairpin:
gaau   u      -        a  c       -gug  a 
    ggc gucguc uuaccuga ca uauuaga    uc u
    ||| |||||| |||||||| || |||||||    ||  
    ccg UAGCAG AAUGGACU GU AUAAUcu    ag a
----   u      U        -  C       auaa  u 


mirna_id: bma-mir-279
hairpin:
--------------   uu          c        u       ugg aug 
              uca  cguagcugag augguucu agucaug   c   u
              |||  |||||||||| |||||||| |||||||   |    
              agu  guauCGACUC UACCAAGA UCAGUac   g   a
aauucuuacggccc   --          A        -       uua aga 


mirna_id: bma-mir-281
hairpin:
-ggu        a  -ac         -ca     u      --  u 
    gaacgcag cg   aaagagagc   ucugu gacagu  ca a
    |||||||| ||   |||||||||   ||||| ||||||  || u
    cuuguguc gu   UUUCUCUCG   AGGUA CUGUca  gu a
gaau        c  acA         UUA     -      ac  u 


mirna_id: osa-MIR395x
hairpin:
a      au     u     cu        u       -  a    aa 
 uuuggu  cgcca gaguu  cuucaaac cuucaua cg cacu  u
 ||||||  ||||| |||||  |||||||| ||||||| || ||||   
 aaacca  guggu CUCGA  GAGGUUUG GAAGUGu gu guga  u
c      cu     u     -U        U       u  a    ac 


mirna_id: osa-MIR395y
hairpin:
u   c  ag         g             -   aac     uuacuc     ca 
 ggc cc  gaguuccuu caagcacuucaca uag   uucag      ucaua  a
 ||| ||  ||||||||| ||||||||||||| |||   |||||      |||||   
 ccg gg  CUCAAGGGG GUUUGUGAAGUGu auc   gaguu      agugu  c
a   u  cu         -             u   gaa     ----uu     ua 


mirna_id: api-mir-137
hairpin:
a     g ug  cc  c       ug  ac      cauau 
 acuug u  gc  cg guauucu  gg  auaaca     u
 ||||| |  ||  || |||||||  ||  ||||||      
 ugaac a  uG  GC CAUAAGA  UC  UAUugu     u
-     - gu  AU  A       GU  GU      cagaa 


mirna_id: api-mir-190
hairpin:
uuc                AU         uuaua 
   gugAGAUAUGUUUGAU  UCUUGGUUG     u
   ||||||||||||||||  |||||||||     u
   cauuuuauacaggcua  agagccagc     u
---                --         caaag 


mirna_id: api-mir-10
hairpin:
-    u      cu   -  G    U           ugaa 
 augc cuacau  ACC CU UAGA CCGAAUUUGUu    a
 |||| ||||||  ||| || |||| |||||||||||    a
 uacg ggugug  ugg ga aucu ggcuuaaacag    a
a    u      uu   a  g    u           cggc 


mirna_id: api-mir-iab-4
hairpin:
c     -         A  U    C   A u   uua 
 ccugu ACGUAUACU AA GUAU CUG g gca   u
 ||||| ||||||||| || |||| ||| | |||   a
 ggaca ugcauauga uu caua ggc c ugu   a
-     a         c  c    u   - -   caa 


mirna_id: api-bantam
hairpin:
cgaagc          uu     ug     uuuauc 
      ugguuuucac  ugauc  ucaga      a
      ||||||||||  |||||  |||||      u
      AUCGAAAGUG  ACUAG  AGUcu      u
--uUUA          UU     --     uacuug 


mirna_id: api-mir-1923
hairpin:
aacu      uuaaaau    -  uu  aua    ---uuu   a   u 
    ugccau       gcug gc  cg   acgu      uca uaa a
    ||||||       |||| ||  ||   ||||      ||| |||  
    gCGGUG       UGAC CG  GC   UGCG      agu auu u
---g      ------C    A  UU  -CA    CUAAuc   a   u 


mirna_id: api-mir-184a
hairpin:
--------        -       -  uug   gca 
        ccuuauca uucuucg cc   ugu   a
        |||||||| ||||||| ||   |||   u
        GGAAUAGU AAGAGGC GG   aca   u
uaugguCG        C       A  Uca   aau 


mirna_id: api-mir-276
hairpin:
ga   cu    a     ag          uuca   ua 
  cca  agcg gguau  aguuccuacg    aau  u
  |||  |||| |||||  ||||||||||    |||  u
  ggu  UCGU CCAUA  UCAAGGAUgc    uug  a
-a   UC    G     CU          -uca   ua 


mirna_id: api-mir-281
hairpin:
---        -ua     c      a  auu 
   aagagagc   uccgu gacagu ua   u
   ||||||||   ||||| |||||| ||   u
   UUCUCUCG   AGGUA CUGUca au   u
uaU        UUG     -      c  caa 


mirna_id: api-mir-993
hairpin:
---         uc    c      uc          uaga   a 
   cauccguga  uacc uguaga  cgggcuuuug    aua u
   |||||||||  |||| ||||||  ||||||||||    ||| c
   guaggcauU  AUGG ACAUCU  GCUCGAAGac    uau g
aag         CU    -      CU          -uug   a 


mirna_id: ath-MIR2933a
hairpin:
gaaa   g  gg        ag        ga a g     - g  gg       g 
    uuc uu  cgauuuug  ugaaaucg  g g gaauu c uc  cgauuuu a
    ||| ||  ||||||||  ||||||||  | | ||||| | ||  |||||||  
    aag ag  gcuaaagu  guuuuagc  C C CUUAA G AG  GCUAAAG g
cuaa   g  ag        ga        gg - G     A G  AG       u 


mirna_id: ath-MIR2933b
hairpin:
gaaa   g  gg        ag        ga a g     - g  gg       g 
    uuc uu  cgauuuug  ugaaaucg  g g gaauu c uc  ugauuuu a
    ||| ||  ||||||||  ||||||||  | | ||||| | ||  |||||||  
    aag ag  gcuaaagu  guuuuagc  C C CUUAA G AG  GCUAAAG g
cuaa   g  ag        ga        gg - G     A G  AG       u 


mirna_id: ath-MIR2934
hairpin:
uuuau     C                    u      -------------u    ucau       a 
     aaccU UUUCUGCAAACGCCUUGGAu uucuuu              ggcu    guuguuc u
     ||||| |||||||||||||||||||| ||||||              ||||    |||||||  
     uugga AAAGAUGUUUGUGGAACCUA aagaaa              ccga    uaauaag u
aaacu     a                    C      uuuauucuacuuuu    ----       a 


mirna_id: ath-MIR2936
hairpin:
           --------agc       -       C      Gauaccaa   ---u    aauc            -----uauaau     cau 
ccauuuucgaa           CUUGAGA GAGAGAA ACAGAC        cuu    cuuc    ucguugccgcag           uaucu   u
|||||||||||           ||||||| ||||||| ||||||        |||    ||||    ||||||||||||           |||||    
gguaaaagcuu           gaacuuu cucucuu ugucug        gaa    gaag    agcggcggcguc           auagg   c
           cauucaccaaa       u       u      aaaaauaa   cauc    -aac            uuccucucuau     cuc 


mirna_id: ath-MIR2937
hairpin:
       ------   -ua     c       c       a   c       g  u   c                               a      a                      c        c    cuacaaaaca       c            aa   -aa                gcuagugaggccaguaccguaguuaauauu 
cauuuuc      cgu   guaac uauuggc auuugau acu caacaag ac aau aaacgagaaccauuugaugauguuaauggug aacaca gacccaucagcaaacucuccuc aaugguca acca          uuagauc uuuaaugacucc  caa   cucuuaugaugugggu                              g
|||||||      |||   ||||| ||||||| ||||||| ||| ||||||| || ||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||||| ||||          ||||||| ||||||||||||  |||   ||||||||||||||||                              a
guaaaag      gua   cauug auaaccg uaaacua uga guuguuu ug uua uuugcucuugguaaacuacuauaauuacuac uugugu cuggguaguuguuugggaggag uuacuagu uggu          aaucuag aaauuaCUGAGG  GUU   GAGAAUAcuacaccua                              u
       caccau   ucg     u       a       c   u       a  c   a                               g      g                      a        u    ----------       a            AA   GUC                aagaaaacaucugucagucugguuuuugug 


mirna_id: ath-MIR2938
hairpin:
          c         uu     ucuaau  g        cu  ucca 
aaaaacugga cccucuuaa  agauc      uu uuuucuuu  uc    a
|||||||||| |||||||||  |||||      || ||||||||  ||     
uuuuuGACCU GGGAGAGUU  UCUAG      aa aaaagaaa  ag    a
          U         -U     ----uu  g        -c  uuua 


mirna_id: ath-MIR2939
hairpin:
gu     --cc   a    u c   a     a    u        --         a      a 
  uguca    guu gucu u acu cgaug cuua uguugugu  uaccaaaga aacaua g
  |||||    ||| |||| | ||| ||||| |||| ||||||||  ||||||||| |||||| g
  acggu    caa caga a uga gcUAC GAAU ACAACACG  AUgguuucu uugugu c
-c     aaaa   -    c u   c     C    C        CA         g      u 


mirna_id: rco-MIR156a
hairpin:
----    gU      -    A           u    uucuu    aucg 
    gggc  GACAGA AGAG GUGAGCACAca gguu     gcau    a
    ||||  |||||| |||| ||||||||||| ||||     ||||    u
    cccg  cugucu ucuc cacucgugugu ucga     cgua    a
ucca    --      a    c           c    -uuuu    guuc 


mirna_id: rco-MIR156b
hairpin:
-   -a         -    -        A        uuu     a 
 gaa  uUGACAGAA GAGA GUGAGCAC cagaggca   guaua a
 |||  ||||||||| |||| |||||||| ||||||||   |||||  
 cuu  aacugucuu cucu cacucgug guuuucgu   cauau u
c   cg         u    u        c        ucc     c 


mirna_id: rco-MIR156c
hairpin:
---  a         -             A  u   acu   cu     a 
   gg ggUGACAGA AGAGAGUGAGCAC ca ggu   uuc  gcaug a
   || ||||||||| ||||||||||||| || |||   |||  |||||  
   cc ccacugucu ucucucauucgug gu ccg   aag  cguac u
ccg  -         a             c  u   ---   cu     u 


mirna_id: rco-MIR156d
hairpin:
--  ga         -     -       A   ag   auu        
  ga  cUGACAGAA GAGAG UGAGCAC cgc  gca   guaugga 
  ||  ||||||||| ||||| ||||||| |||  |||   |||||| a
  cu  gacugucuu cucuc acucgug gug  cgu   cauaccg 
ac  uc         u     c       c   ga   cac        


mirna_id: rco-MIR156e
hairpin:
--a   u           -          -a       uu    u      
   aug UGACAGAAGAG AGAGAGCACA  cccggca  aggc aaaga 
   ||| ||||||||||| ||||||||||  |||||||  |||| |||| g
   uac acugucuucuc ucucucgugu  ggguugu  uccg uuucu 
cac   u           c          ga       -u    -      


mirna_id: rco-MIR156f
hairpin:
--uuuu            -U          --    a      c   cga 
      gUUGACAGAAGA  AGAGAGCACa  acuu acauac caa   c
      ||||||||||||  ||||||||||  |||| |||||| |||    
      caacugucuucu  uuucucgugu  ugaa uguaug guu   a
uauauu            uu          uu    g      u   uag 


mirna_id: rco-MIR156g
hairpin:
--  u  U           -         u  c  -   a     u  ug 
  ug ug UGACAGAAGAU AGAGAGCAC ga ga uga augca ga  g
  || || ||||||||||| ||||||||| || || ||| ||||| ||   
  ac ac acugucuucug ucucucgug uu cu acu uacgu cu  g
cc  u  u           a         u  c  c   c     -  ca 


mirna_id: rco-MIR156h
hairpin:
--ugu  U         -              u  -   u     auga 
     ug UGACAGAAG AUAGAGAGCACaga ga uga gugca    c
     || ||||||||| |||||||||||||| || ||| |||||    u
     ac acugucuuc uaucucucguguuu cu acu uacgu    u
cuucc  u         g              c  c   c     cuuu 


mirna_id: rco-MIR159
hairpin:
--ga            ga       ua        --ugau      auu     g     c    g uc      c     aag     au 
    guggagcuccuu  aguccaa  gaggaucu      ggguag   gagcu cugag uaug a  ccacag ccuau   cagag  u
    ||||||||||||  |||||||  ||||||||      ||||||   ||||| ||||| |||| |  |||||| |||||   |||||  a
    cAUCUCGAGGGA  UUAGGUU  uuccuaga      uccauu   uucga gacuc auac u  gguguu ggaua   guuuu  u
ucua            AG       Ug        uuaugu      -ac     g     u    g uc      c     --g     aa 


mirna_id: rco-MIR160a
hairpin:
--uu      C       C               a  uu      a 
    gugUGC UGGCUCC UGUAUGCCAuuugug ag  caucag a
    |||||| ||||||| ||||||||||||||| ||  ||||||  
    cguacg accgagg acguacgguagacgc uc  gugguu g
ucgu      u       a               c  ug      c 


mirna_id: rco-MIR160b
hairpin:
-- gu     C       C          aa  uag   u  u   cu 
  g  uaUGC UGGCUCC UGUAUGCCAc  gc   agu ca ucc  u
  |  ||||| ||||||| ||||||||||  ||   ||| || |||  c
  c  auacg accgagg gcgugcggug  cg   ucg gu agg  c
cu uc     a       a          gc  uua   -  u   ua 


mirna_id: rco-MIR162
hairpin:
--uca     g    c    c       ucuuccuggaagauuuuguugu 
     cugga gcag gguu aucgauc                      g
     ||||| |||| |||| |||||||                      a
     GACCU CGUC CCAA UAGCUag                      a
uucgc     A    U    A       cuaaguacgcaaaauaaaaaca 


mirna_id: rco-MIR164a
hairpin:
--cu  c        CA               cuuucuu 
    ug UGGAGAAG  GGGCACGUGCAauuc       u
    || ||||||||  |||||||||||||||        
    ac accucuuc  cucgugcacguuaag       c
gggu  a        ac               ccucucc 


mirna_id: rco-MIR164b
hairpin:
-  -  c        CA             --ccccaacac   -     uuc 
 cc ug UGGAGAAG  GGGCACGUGCAaa           ucc uuggu   u
 || || ||||||||  |||||||||||||           ||| |||||   u
 gg ac accucuuc  cucgugcacguuu           agg aaccg   g
u  u  a        cc             ucucauaucaa   u     uaa 


mirna_id: rco-MIR164c
hairpin:
--  a     A    CA         CAuu      -  augcauaauugaacauaca 
  ca gaUGG GAAG  GGGCACGUG    acuaac uc                   u
  || ||||| ||||  |||||||||    |||||| ||                   a
  gu cuacc cuuc  cccguguac    ugauug ag                   c
ca  a     c    ug         uucu      g  gucguucuuuuuacgcaua 


mirna_id: rco-MIR164d
hairpin:
--  u         GC           U      a    aa g 
  ca gcUGGAGAA  AGGGCACAUGC agauuu ucag  u a
  || |||||||||  ||||||||||| |||||| ||||  |  
  gu cgaccucuu  uuccguguacg uuuaag aguc  a a
ag  u         gu           u      -    ca a 


mirna_id: rco-MIR166a
hairpin:
--           uu         a   ccua    ----u     uguuucaguuucauucaauauacugaaaaa 
  uaaggggaaug  gucugguuc agg    ccua     ugauc                              u
  |||||||||||  ||||||||| |||    ||||     |||||                              c
  auuCCCCUUAC  CGGACCAGG Ucc    ggau     acuag                              u
ua           UU         C   ucua    ucuuu     uuuagcugguguccuaucaaaggguauaug 


mirna_id: rco-MIR166b
hairpin:
--  a        uu      cu   g         ---ua    u       u     ug 
  ug ggggaaug  gucugg  cga gucacuaau     gauc augauuu auuuu  c
  || ||||||||  ||||||  ||| |||||||||     |||| ||||||| |||||  u
  ac CCCCUUAC  CGGACC  GCU cagugauug     cuag ugcuaga uagaa  u
ua  c        UU      AG   g         uuaug    u       -     uu 


mirna_id: rco-MIR166c
hairpin:
--  a  u     uu           u        u  u   aag 
  ug gg gaaug  gucugguucga gucauuca uu gug   c
  || || |||||  ||||||||||| |||||||| || |||   u
  ac CC CUUAC  CGGACCAGGCU uaguaagu aa uac   g
ca  c  C     UU           u        c  u   aaa 


mirna_id: rco-MIR166d
hairpin:
--  a        cu             c     ----   -     c 
  ug ggggaaug  gucugguucgaga cauuc    gcu ugaug c
  || ||||||||  ||||||||||||| |||||    ||| ||||| a
  ac CCCCUUAC  CGGACCAGGCUcu guaag    cga acuac c
ca  c        UU             a     ucuu   c     c 


mirna_id: rco-MIR166e
hairpin:
--  a        uu      cu   g   u  c  --u     --   uucaauuuu    auag    a 
  ug ggggaaug  gucugg  cga gac cu uu   ugauc  ccu         cucc    aucc a
  || ||||||||  ||||||  ||| ||| || ||   |||||  |||         ||||    |||| u
  ac CCCCUUAC  CGGACC  GCU cug ga ag   acuag  ggg         gagg    uagg a
ua  c        UU      AG   g   u  c  uuu     au   --------u    guua    c 


mirna_id: rco-MIR167a
hairpin:
--aaa     A    - -C              uu        agaca   gaaagaa      agaua 
     ggUGA GCUG C  AGCAUGAUCUAgcu  gguuagug     gcu       agauac     a
     ||||| |||| |  ||||||||||||||  ||||||||     |||       ||||||      
     ucacu cgac g  ucguacuggaucga  ccaaucgu     cga       ucuaug     c
cuucc     c    a uc              uc        gauaa   ------a      guaca 


mirna_id: rco-MIR167b
hairpin:
--ucagu           G        Aa    -     cc 
       UGAAGCUGCCA CAUGAUCU  aucu uccuc  u
       ||||||||||| ||||||||  |||| |||||  c
       acuuugacggu guacuaga  uaga aggag  g
guugccc           -        -c    g     uu 


mirna_id: rco-MIR167c
hairpin:
--    u           G          ag       a 
  auag UGAAGCUGCCA CAUGAUCUGG  cuuuucu u
  |||| ||||||||||| ||||||||||  |||||||  
  uguc acuuugacggu guacuagauc  gagagga c
gu    c           -          -a       c 


mirna_id: rco-MIR168
hairpin:
--cua     C          U     A ug   g       uauu      gauuu    gc   g 
     auUCG UUGGUGCAGG CGGGA c  auu gcuuuuc    ucuaau     ccag  ggc a
     ||||| |||||||||| ||||| |  ||| |||||||    ||||||     ||||  ||| a
     uaagu aacuacguuc gcccu g  uaa ugaaagg    agauua     gguu  uug a
gaagc     c          c     a gu   g       ---u      gaacu    -a   a 


mirna_id: rco-MIR169a
hairpin:
--     C          GA        cauc   u          u 
  gaaua AGCCAAGGAU  CUUGCCGG    aau uauauauaua a
  ||||| ||||||||||  ||||||||    ||| ||||||||||  
  cuuau ucgguucuug  gaacggcu    uua auauauauau u
ua     a          uc        --au   u          a 


mirna_id: rco-MIR169b
hairpin:
--uaauuC         UG         cac   cuauaua   cuu 
        AGCCAAGGA  ACUUGCCGG   agc       ugu   c
        |||||||||  |||||||||   |||       |||   u
        ucgguucuu  ugaacggcc   ucg       aca   a
auguuaca         gu         --a   aucgucg   cuc 


mirna_id: rco-MIR169c
hairpin:
--   ccU            A         cauauauaaaauucuuucugucgccag 
  gga   GAGCCAAGGAUG CUUGCCGcg                           c
  |||   |||||||||||| |||||||||                            
  cuu   cucgguucuuac gaacggugc                           a
ca   cau            a         cuuuugggaaaaguccgauagcuacua 


mirna_id: rco-MIR171a
hairpin:
--aa   g        uc         a     a   u     aaa 
    acg gauauugg  cgguucaau agaaa cag gcuca   u
    ||| ||||||||  ||||||||| ||||| ||| |||||    
    uGC CUAUAACC  GCCGAGUUa uuuuu guc cgggu   g
cacg   A        GU         g     c   c     auu 


mirna_id: rco-MIR171b
hairpin:
--     a        ug             g u  -uu      u 
  guacg gauauugg  cgguucaaucaga a ca   gcucua a
  ||||| ||||||||  ||||||||||||| | ||   ||||||  
  cguGC CUAUAACC  GCCGAGUUaguuu u gu   cgagau u
ua     A        GU             g u  uuu      a 


mirna_id: rco-MIR171c
hairpin:
--ucu                     a  cg   c       u 
     gauguuggcaugguucaauca au  aag acucagc g
     ||||||||||||||||||||| ||  ||| ||||||| c
     CUAUAACCGUGCCGAGUUAGU ua  uuc ugagucg c
uaccg                     c  au   u       u 


mirna_id: rco-MIR171d
hairpin:
--ugu         c       c     caaaaacgauguguuuucucaagcauuuguuuuu 
     gauguuggc cgguuca ucaga                                  c
     ||||||||| ||||||| |||||                                   
     CUAUAACCG GCCGAGU AGUuu                                  g
ugauu         U       U     ccgguaauacgaacacaauuguauaguucgcaaa 


mirna_id: rco-MIR171e
hairpin:
--           a            a  c   ucu     a 
  ggggauguugg auggcucaauca au aaa   cccaa g
  ||||||||||| |||||||||||| || |||   |||||  
  cccCUAUAACC UGCCGAGUUAGU ua uuu   ggguu u
ac           G            c  a   ccu     u 


mirna_id: rco-MIR171f
hairpin:
--  u         c       c     -    ---a   cuau    uc  cu  u 
  ug gauauuggc ugguuca ucaga caug    aac    cccu  uc  gc u
  || ||||||||| ||||||| ||||| ||||    |||    ||||  ||  || a
  ac CUAUAACCG GCCGAGU AGUuu guau    uug    ggga  ag  cg u
ug  u         U       U     u    aucg   uugu    ua  uc  u 


mirna_id: rco-MIR171g
hairpin:
--  c          a         c  a  -  -ga      cau 
  ag gauguuggug gguucaauc ga ga cg   uuuaca   u
  || |||||||||| ||||||||| || || ||   ||||||    
  uc CUAUAACCGC CCGAGUUAG cu cu gc   aaaugu   c
uu  a          G         A  -  a  agg      ugu 


mirna_id: rco-MIR172
hairpin:
--   a  g                a  aacuu    -u    -   g       uu ug ucccuuuucuuuuu 
  cug ug agcaucaucaagauuc ca     uauc  aggg cua uggguug  g  g              c
  ||| || |||||||||||||||| ||     ||||  |||| ||| |||||||  |  |              u
  ggc AC UCGUAGUAGUUCUAAG gu     auag  uccc gau accuaac  c  u              u
ac   G  G                G  -----    uu    u   a       uu gu cucuuuuucuuuuu 


mirna_id: rco-MIR319a
hairpin:
--uu   a     uu          cuc     u   gg            a -  g   ac       uc  aauacugaguuaaaaaguucagaaaacaaaagg 
    aag gagcu  cuucagucca   auggg ggc  uaggauuuaauu g cu ccg  ucauuca  ca                                 g
    ||| |||||  ||||||||||   ||||| |||  |||||||||||| | || |||  |||||||  ||                                 g
    uUC CUCGA  GAAGUCAGGU   ugucc ucg  auucuaaguuaa c ga ggc  aguaagu  gu                                 c
ucau   C     GG          Uca     u   -a            a a  g   gu       ga  aaaugacccauuuggaagaaaagaugucguggg 


mirna_id: rco-MIR319b
hairpin:
--aa  a                   uc  a       gag       acu     g u ac       u       cu    a  aucaa 
    ga ggagcucucuucaguccag  ca ggcgguu   ggcuggg   uagcu c g  ucguugg ucaagag  cauc uc     u
    || |||||||||||||||||||  || |||||||   |||||||   ||||| | |  ||||||| |||||||  |||| ||      
    cU CCUCGAGGGAAGUCAGGUU  gu cugucgg   uugacuu   gucga g c  agcaacc aguuuuu  guag ag     g
uaac  C                   cu  a       -ua       -gu     g u ga       u       cu    -  aaugu 


mirna_id: rco-MIR319c
hairpin:
--uu   a                 cu      cg  c    guuu    --      g   ac        u  aa    c   aaa  ggag au 
    aag gagcucucuucagucca  cauggg  gg gaag    ugaa  uuaucu ccg  ucauucau ca  caca uag   ag    c  u
    ||| |||||||||||||||||  ||||||  || ||||    ||||  |||||| |||  |||||||| ||  |||| |||   ||    |   
    uUC CUCGAGGGAAGUCAGGU  gugucu  uc cuuc    acuu  aauaga ggc  aguaagug gu  gugu auc   uc    g  a
cgau   C                 Uc      cu  u    --au    ua      g   gu        u  aa    u   --g  gaua aa 


mirna_id: rco-MIR319d
hairpin:
--cca                      --a   a   cuu  a  c  c  a  ---   g    cu         a   aau      caagu     a 
     aaggagcuccuuucaguccaau   ugg ggg   ag ag gg aa ga   gcu ccau  caugcauua ggc   acuuga     uuuuc c
     ||||||||||||||||||||||   ||| |||   || || || || ||   ||| ||||  ||||||||| |||   ||||||     ||||| a
     UUCCUCGAGGGAAGUCAGGUUa   acc ccc   uc uc cc uu cu   cga ggug  guacguggu ccg   ugaacu     aaaag g
cuuuc                      ccc   -   --u  c  -  -  c  caa   g    ug         -   guu      ---cu     u 


mirna_id: rco-MIR390a
hairpin:
--    u          G           -       cauug      -ua    c 
  cugu AAGCUCAGGA GGAUAGCGCCg ugaagau     auauau   uugu c
  |||| |||||||||| ||||||||||| |||||||     ||||||   ||||  
  gaca uuugaguccu ccuaucgcggu auuucug     uguaua   aaca a
ug    c          a           g       --aua      caa    a 


mirna_id: rco-MIR390b
hairpin:
-     -          G         C     -u     uguguuuuuaugaauaugacu 
 cuaau AAGCUCAGGA GGAUAGCGC augga  ggaua                     c
 ||||| |||||||||| ||||||||| |||||  |||||                     g
 gguua uuugaguccu ccuaucgcg uaucu  ucuau                     u
u     c          a         a     uc     uuuuuucguucgguucuuuuc 


mirna_id: rco-MIR393
hairpin:
--aaag    A            U         uc       ---accuaa    g 
      uUCC AAGGGAUCGCAU GAUCuaaug  guugggu         auga u
      |||| |||||||||||| |||||||||  |||||||         |||| u
      aagg uucccuagcgua cuagguuac  uaaccua         uauu a
ccucug    a            -         -u       auaucuaaa    a 


mirna_id: rco-MIR395a
hairpin:
-- u          ug         cug   c   aa 
  c agaguucccu  aacacuuca   gga gaa  u
  | ||||||||||  |||||||||   ||| |||   
  g uCUCAAGGGG  UUGUGAAGU   ccu cuu  c
ug u          GU         Caa   u   ac 


mirna_id: rco-MIR395b
hairpin:
--            ug c       u      -uauuau    ccuuaa 
  cuggaguucccc  g cgcuuca uggggc       auac      u
  ||||||||||||  | ||||||| ||||||       ||||       
  gauCUCAAGGGG  U GUGAAGU aucccg       ugug      u
ug            GU U       C      uccuuau    uacaua 


mirna_id: rco-MIR395c
hairpin:
-    -        ug         c     -u   aaaag 
 cuag aguucccu  agcacuuca uggga  gaa     g
 |||| ||||||||  ||||||||| |||||  |||     u
 gguc UCAAGGGG  UUGUGAAGU auccu  cuu     c
u    C        GU         C     uc   cugac 


mirna_id: rco-MIR395d
hairpin:
-    -        ug c       u         uu    aag 
 cuag aguucccu  a cacuuca uguggauua  cuuc   c
 |||| ||||||||  | ||||||| |||||||||  ||||    
 gguc UCAAGGGG  U GUGAAGU acauuuggu  gagg   u
u    C        GU U       C         -u    aac 


mirna_id: rco-MIR396
hairpin:
--  c                       c    ucuucuucuucuucuucuuagauuucuuu 
  ug uuUUCCACAGCUUUCUUGAACUU uucu                             c
  || ||||||||||||||||||||||| ||||                              
  ac agagggugucgaaagaacuugaa aaga                             u
gu  a                       u    cacgguguaguucuuucuauauccguuac 


mirna_id: rco-MIR397
hairpin:
--      C                A    u  cccuacaugacauauuucuguugguuaauucauuaccaauauccc 
  aaacaU AUUGAGUGCAGCGUUG UGaa uc                                             u
  |||||| |||||||||||||||| |||| ||                                             u
  uuugua uaacuuacgucgcgac acuu ag                                             c
uu      c                c    u  uagguuuugguagauaaggguuuuuccaaaugaagaaaaaaauuu 


mirna_id: rco-MIR398a
hairpin:
--       a    cuc            c     u   cu  -  c 
  ccagagg gugg   ccugagaacaca gugca ugg  cu ca c
  ||||||| ||||   |||||||||||| ||||| |||  || || u
  gguUUCC CACU   GGACUCUUGUGU cacgu acc  ga gu u
gg       C    ---            c     c   uu  u  u 


mirna_id: rco-MIR398b
hairpin:
--cua    a            u      --u       cuu  c    -uau    uuaucaucu 
     cagg gcgaccugagaa cacaug   ggacauu   ag uaua    accc         u
     |||| |||||||||||| ||||||   |||||||   || ||||    ||||          
     GUCC CGCUGGACUCUU GUGUac   cuugugg   uc augu    uggg         c
gggcc    C            -      uuu       -uu  -    uauu    uuuuauucu 


mirna_id: rco-MIR399a
hairpin:
-- ug       c     gc           ----ag    cac  gc 
  u  uagggca cucuu  uuggcagguaa      ggga   ua  u
  |  ||||||| |||||  |||||||||||      ||||   ||  a
  a  GUCCCGU GAGAG  AACCGUucguu      cccu   au  g
uc gu       U     GA           caauaa    aca  ac 


mirna_id: rco-MIR399b
hairpin:
--uuaca       a     a      u  a  -     -a  u    aaacca 
       gggcaaa ucucc uuggca gg ac cacua  ga aucc      a
       ||||||| ||||| |||||| || || |||||  || ||||      u
       CCCGUUU AGAGG AACCGU cc ug gugau  cu uagg      c
auaacGG       -     A      c  g  u     aa  u    accgaa 


mirna_id: rco-MIR399c
hairpin:
--uuaca       ac    a        c   cag  uaa    u    c 
       gggcaaa  cuuc uuggcaug ugc   ac   gaug ggga g
       |||||||  |||| |||||||| |||   ||   |||| ||||  
       CCCGUUU  GAGG AACCGUac acg   ug   cuau ccuu c
auagcGG       -A    A        u   ---  -ug    -    a 


mirna_id: rco-MIR399d
hairpin:
--          u     gc         ---aau   a    g   a    a 
  ucguagggca cucuc  uuggcaggc      gau ugaa uga gcua a
  |||||||||| |||||  |||||||||      ||| |||| ||| |||| u
  aguGUCCCGU GAGAG  AACCGUucg      cua guuu auu cgau u
uc          C     GA         guaacc   -    g   a    u 


mirna_id: rco-MIR399e
hairpin:
--uuaca      au      a        ua  -    -     -c    a  uaa 
       gggcaa  aucucc uuggcagg  gc cacu uuaga  augc uu   a
       ||||||  |||||| ||||||||  || |||| |||||  |||| ||    
       CCCGUU  UAGAGG AACCGUcu  cg guga aauuu  uacg ag   u
uuaacGA      --      A        uc  u    c     au    -  uuu 


mirna_id: rco-MIR399f
hairpin:
--   c                 a    -cu     caag gac 
  uua ugagcaagucuucuuug caga   uccac    c   a
  ||| ||||||||||||||||| ||||   |||||    |    
  aau ACUCGUUUAGAGGAAAC GUcu   aggug    g   u
uc   C                 C    auu     caaa gua 


mirna_id: rco-MIR403a
hairpin:
--  u u                    ucaggccauccaugucaggg 
  uc c aguuugugugugaaucuaau                    c
  || | ||||||||||||||||||||                    c
  ag G UCAAACACGCACUUAGAUUg                    c
cu  u C                    ugguacccuauccuaaucau 


mirna_id: rco-MIR403b
hairpin:
--  u u                g   c    ---ca  --aa    guuc 
  uc c aguuugugcgugaauc agc ccau     uc    ggcc    a
  || | |||||||||||||||| ||| ||||     ||    ||||    u
  ag G UCAAACACGCACUUAG UUg ggua     ag    ccgg    u
cu  u C                A   u    accua  cacc    aguu 


mirna_id: rco-MIR408
hairpin:
--a   acu     c          u  a        cu      a 
   aag   gggaa aggcagugca gg uggggcua  aacaga a
   |||   ||||| |||||||||| || ||||||||  |||||| a
   uuC   CCCUU UCCGUCACGU cc aucucggu  uugucu c
gcc   GGU     C          C  c        -u      a 


mirna_id: rco-MIR535
hairpin:
--  ug          G  A         u  ua  cu      a 
  uu  uUGACAACGA AG GAGCACGCu gu  gc  ucaugu a
  ||  |||||||||| || ||||||||| ||  ||  |||||| g
  ga  aacuguugcu uc cucgugcga ca  cg  gguaca g
ua  gu          a  c         c  ca  uu      a 


mirna_id: rco-MIR160c
hairpin:
-- ua     C         GA      uc  a    c       ac 
  g  ucUGC UGGCUCCCU  AUGCCA  ua gaag uugucaa  a
  |  ||||| |||||||||  ||||||  || |||| |||||||   
  c  ggacg acugagggg  uacggu  au cuuu aacgguu  g
ug cc     u         ag      uu  c    u       gu 


mirna_id: aae-mir-184
hairpin:
cc    u     ua         -     g  c  c  -    ua 
  ggug auucg  cccuuauca uucuu cg cc gu guua  u
  |||| |||||  ||||||||| ||||| || || || ||||   
  ccac ugggc  GGGAAUAGU AAGAG GC GG ca cggu  u
uu    -     cC         C     -  A  U  g    ug 


mirna_id: aae-mir-275
hairpin:
auccuuuc    u         -AG    A   GA    -   u a 
        gauu cgCGCGCUA   CAGG ACC  GACu uug c u
        |||| |||||||||   |||| |||  |||| ||| |  
        cuag gcgCGCGAU   GUCC UGG  CUga gau g u
--------    u         GAA    A   -A    c   c u 


mirna_id: aae-mir-277
hairpin:
ua           -   GU    -            ua      u cc 
  guuuuggagug CGU  CAGA AGUGCAUUUACA  gguauu c  g
  ||||||||||| |||  |||| ||||||||||||  |||||| |  u
  uaagaccuuaC GCA  GUCU UCACGUAAAUgu  uuauga g  u
ac           A   UG    A            --      c au 


mirna_id: aae-mir-9c
hairpin:
---c  a            CU    G     u  uga   uug 
    ug aUCUUUGGUAUU  AGCU UAGAa gu   gcu   u
    || ||||||||||||  |||| ||||| ||   |||   g
    ac UGGAGACCAUGA  UCGA AUcuu ua   ugg   a
guca  C            UU    A     c  ---   uau 


mirna_id: aae-mir-8
hairpin:
gucu    -----       -   G     C      --    u 
    guuc     aCAUCUU ACC GGCAG AUUAGA  uauu u
    ||||     ||||||| ||| ||||| ||||||  |||| u
    caag     UGUAGAA UGG CUGUC UAAUcu  auaa g
----    ccugC       A   A     A      uc    a 


mirna_id: aae-mir-252
hairpin:
ga       ac        A U  C     AGaga 
  auucuuu  UAAGUACU G GC GCAGG     u
  |||||||  |||||||| | || |||||     u
  ugagaaG  AUUCGUGA C CG CGUCc     u
--       CU        A C  U     ccaag 


mirna_id: aae-bantam
hairpin:
agaaC         UUUUC     G    au   au 
     CGGUUUUCA     GAUCU ACuu  uug  u
     |||||||||     ||||| ||||  |||   
     GUCGAAAGU     CUAGA Ugag  aac  u
uuuUA         -UUUA     G    --   aa 


mirna_id: aae-mir-71
hairpin:
--     A        U            aguuuca   uau 
  cggca GAAAGACA GGGUAGUGAGAU       ccc   u
  ||||| |||||||| ||||||||||||       |||   g
  gucGU CUUUCUGU UCCAUCACUCUa       ggg   c
ua     A        -            -------   uca 


mirna_id: aae-mir-276-1
hairpin:
-acu   gauu    uc    A     AG         ----g    g 
    ggu    gcca  AGCG GGUAU  AGUUCCUAC     uugc u
    |||    ||||  |||| |||||  |||||||||     ||||  
    ccg    cggu  UCGU CCAUA  UCAAGGAUg     agcg g
agug   --au    uC    G     CU         guuaa    u 


mirna_id: aae-mir-317-1
hairpin:
ga   a  uc      c       -   --     c     uugcau 
  gga uu  ggcuac gggauac acc  cugug ucgcu      u
  ||| ||  |||||| ||||||| |||  ||||| |||||       
  ccu aa  ccggug cUCUAUG UGG  GACAC AGUga      c
ag   -  uc      a       G   UC     A     ucaaag 


mirna_id: aae-mir-2a
hairpin:
---u            cA    -     -         A     uuac  uu 
    gggaacuguuuc  CUCU CAAAG UGGUUGUGA Augag    uc  g
    ||||||||||||  |||| ||||| ||||||||| |||||    ||   
    ucuuuggcaaag  GAGA GUUUC ACCGACACU Uacuc    ag  a
acgc            -C    A     G         A     ---u  ca 


mirna_id: aae-mir-998
hairpin:
aa           c  a     c        gu      ----    u 
  gaaccaauacc ga cugaa ucucgugg  cugcag    uuga a
  ||||||||||| || ||||| ||||||||  ||||||    ||||  
  cuugguugugg cu GACUU AGAGUACC  GAUguu    agcu u
-g           c  C     -        AC      cgaa    u 


mirna_id: aae-mir-92a
hairpin:
aa         C   AC       G    C   -  -ga a 
  ucuacgcau GGU  GGACAGG GCAA AUU gu   c u
  ||||||||| |||  ||||||| |||| ||| ||   |  
  aggugcguA CCG  CCUGUUC CGUU Uaa cg   g u
ug         U   GC       A    A   u  aaa u 


mirna_id: aae-mir-306
hairpin:
ca       uuu   c    C          -  A       augugcauuucucaagcaaucucg 
  uucgcaa   cac gguU AGGUACUGAG UG CUCUCAG                        u
  |||||||   ||| |||| |||||||||| || |||||||                         
  aagcguu   gug cCGA UCUAUGGCUC AC GAGAGuc                        c
aa       ---   a    A          C  -       ccaaaaaguuggaguccaggacuc 


mirna_id: aae-mir-281
hairpin:
u  -uu      a  aaa           -UA     C      ag ga 
 gg   ucgaau ug   auaAAGAGAGC   UCCGU GACagu  g  u
 ||   |||||| ||   |||||||||||   ||||| ||||||  |  a
 cu   agcuua ac   uAUUUCUCUCG   AGGUA CUGUca  u  u
a  uau      -  aug           UUA     -      cu ag 


mirna_id: aae-mir-1889
hairpin:
ga  U        A       A      ugauuuuccuggugaaucccggccuuguccuccgu 
  gg AAUCUCAA UUGUAAC GUGGgu                                   c
  || |||||||| ||||||| ||||||                                   a
  CC UUGGGGUU GACAUUG CACcca                                   c
cc  U        A       -      uaucgcuugugcaaaagcucugugaacagugugaa 


mirna_id: aae-mir-980
hairpin:
acu     uCG   G         U  U      c  gu 
   acaau   GCC UUCAUUGGG CA CUAGCu gu  u
   |||||   ||| ||||||||| || |||||| ||  g
   uguua   CGG AAGUGAUCC GU GAUuga ca  g
---     uaa   G         -  C      -  aa 


mirna_id: aae-mir-278
hairpin:
--u   -            U     U  G      -ug auu 
   ggu gcgaACGGACGA AGUCU CA CGGCCg   c   u
   ||| |||||||||||| ||||| || ||||||   |    
   cca ugUUUGCCUGCU UCAGG GU GCUggu   g   g
ccg   a            U     -  G      uaa aua 


mirna_id: aae-mir-989
hairpin:
-----uucaucauac     u      -cc        c    uu    u   uaccgau 
               gguca ggggga   gccgcuac ucgc  ucac ugg       u
               ||||| ||||||   |||||||| ||||  |||| |||       u
               ucggu ucccuu   UGGUGAUG AGUG  AGUG acc       c
uccuucacaacauua     -      cCA        C    -U    U   uaauacc 


mirna_id: aae-mir-14
hairpin:
------     --     accucaac       a    ugcucu  -   a  a   u       c    uu      u   ggucauuu 
      gugga  auuac        gaauuug acuc      ac ccg ua gcc gugggag gaga  aaggcu gcu        a
      |||||  |||||        ||||||| ||||      || ||| || ||| ||||||| ||||  |||||| |||        u
      caccu  ugaug        cuugagc ugag      ug ggc au ugg UAUCCUC CUCU  UUCUGA Uga        u
cuacua     ac     -ccacgcc       c    caacuu  u   a  a   u       U    UU      C   agcucaca 


mirna_id: aae-mir-11
hairpin:
----aaca     --      agug   c          C        CC    uacacuu 
        uugau  gcgagu    ccg gcgAGAACUC GGCUGUGA  UGUG       u
        |||||  ||||||    ||| |||||||||| ||||||||  ||||        
        aacua  ugcucg    ggu CGUUCUUGAG CUGACACU  ACac       a
agguaauc     gc      --ga   U          U        --    uaaaccu 


mirna_id: aae-mir-190
hairpin:
----------g      uc      -            AU      U  u   auu 
           ggugau  cggugA GAUAUGUUUGAU  UCUUGG UG uaa   u
           ||||||  |||||| ||||||||||||  |||||| || |||    
           cuacug  gucauu uuauacaaacua  aggacc ac auu   u
gcuucagagua      gu      a            --      c  u   aua 


mirna_id: aae-mir-1
hairpin:
-   aa            c        a   -  gauu 
 cga  guuccaugcuuc uugcauuc aua gu    c
 |||  |||||||||||| |||||||| ||| ||     
 gcu  cGAGGUAUGAAG AAUGUAAG Uau cg    u
g   cg            A        G   a  aaag 


mirna_id: aae-mir-34
hairpin:
caa    aua   ua      U    U   C        uagaacu  ggg           -    u 
   ggca   cgc  UGGCAG GUGG UAG UGGUUGug       uu   gggcuuccgug gcgu c
   ||||   |||  |||||| |||| ||| ||||||||       ||   ||||||||||| ||||  
   ccgu   gcg  GCCGUC CGCC AUC ACCAACac       ag   cucgggggcac cgcg g
gga    gga   CC      C    U   -        -----uu  --a           a    c 


mirna_id: aae-mir-1890
hairpin:
aucg  a          g     ug    g   u    ua  gu 
    ac uacggcuaga cuaau  gaga uuc ugaa  gu  u
    || |||||||||| |||||  |||| ||| ||||  ||  g
    ug gugcuGGUCU GAUUA  UUCU AAG acuu  ca  u
---g  -          G     GU    A   U    -c  ag 


mirna_id: aae-mir-957
hairpin:
-u     g              g       -guau   g 
  ccggc uuaguuuugggcgg uuuuagu     uuc a
  ||||| |||||||||||||| |||||||     ||| u
  ggcCG AGUCAAAACCUGCC AAAGUua     gag u
gc     G              -       acuau   a 


mirna_id: aae-mir-305
hairpin:
aa     -     cu U         U  G     -CUG    u 
  uguca caugu  A UGUACUUCA CA GUGCU    Guug u
  ||||| |||||  | ||||||||| || |||||    ||||  
  acagu gugua  U ACAUGAGGU GU CACGG    uagc u
ug     c     AU C         U  A     Ccca    u 


mirna_id: aae-mir-996
hairpin:
aa        u   c    u     -        g     uuuuccagu 
  cucaauuu cgu ggcg gcaug aaucuggu cacgg         u
  |||||||| ||| |||| ||||| |||||||| |||||         g
  gaguugaa gua CUGC CGUAC UUAGAUCA GUgcu         u
ua        -   u    U     A        -     ucgcuauaa 


mirna_id: aae-mir-87
hairpin:
----acca      - a     ca        -      aa    ---g   guauu 
        gauugu c cuggc  gccugaaa uuugcu  accu    ugu     u
        |||||| | |||||  |||||||| ||||||  ||||    |||     g
        cuaaca g ggcUG  UGGACUUU AAACGA  UGga    aca     a
uacuaacg      a a     UG        U      -G    acua   aacuu 


mirna_id: aae-mir-12
hairpin:
uu    cU      U    C          ------     ---u      a  ac 
  cgga  GAGUAU ACAU AGGUACUGGU      gucga    auucga uc  c
  ||||  |||||| |||| ||||||||||      |||||    |||||| ||   
  gccU  CUCGUA UGUA UUCAUGACca      uaguu    ugggcu ag  a
--    CU      U    -          uucaau     uccu      a  ca 


mirna_id: aae-mir-13
hairpin:
guc u       -    A            C    uu   a g 
   g gaucgga UCGU AAAAUGGUUGUG UGUG  guu c c
   | ||||||| |||| |||||||||||| ||||  ||| |  
   c cuagcUU AGCA UUUUACCGACAC AUac  uaa g u
-gu -       G    G            U    -u   a c 


mirna_id: aae-mir-999
hairpin:
--------              g     ga   u      cau 
        gcagggacgcgguc ugcag  aau auuugg   u
        |||||||||||||| |||||  ||| ||||||    
        cguuUCUGUGUCAG AUGUC  UUG Uaaacu   a
cuaguggg              A     AA   -      uag 


mirna_id: aae-mir-125
hairpin:
uu       uuu        UC  U    C CU         --  aua 
  aguuuug   cugcugau  CC GAGA C  AACUUGUGA  cu   g
  |||||||   ||||||||  || |||| |  |||||||||  ||    
  uuagagc   ggcgauua  gg cucu g  uugaacacu  ga   u
ac       --u        -u  c    a uu         uu  agu 


mirna_id: aae-mir-308
hairpin:
agcgcug                    GC    u cau  g 
       uuuCGCGGUAUAUUCUUGUG  UUGa g   uu a
       ||||||||||||||||||||  |||| |   ||  
       agaguGUCAUAUGAGGACAC  Aacu c   aa a
-----ag                    UA    - --u  a 


mirna_id: aae-mir-315
hairpin:
-a      c   aaa                A      ----   gca 
  guguuu uau   aUUUUGAUUGUUGCUC GAAAGC    cgu   u
  |||||| |||   |||||||||||||||| ||||||    |||   u
  cacaaa aua   UGAAACUAAUGACGAG CUUUCg    gca   u
ac      -   aaC                -      cugg   aag 


mirna_id: aae-mir-1891-1
hairpin:
-     uc        UGA         UU        uugua 
 cuuuu  cgucaugu   GGAGUUAAU  GCGUGUUU     u
 |||||  ||||||||   |||||||||  ||||||||      
 gaaaa  guaguaca   ucucaauua  ugcacaaa     u
c     ua        ugg         cc        uuagu 


mirna_id: aae-mir-1891-2
hairpin:
--au     uc        UGA         UU        uugua 
    cuuuu  cgucaugu   GGAGUUAAU  GCGUGUUU     u
    |||||  ||||||||   |||||||||  ||||||||      
    gaaaa  guaguaca   ucucaauua  ugcacaaa     u
aacc     ua        ugg         cc        uuagu 


mirna_id: aae-mir-1175
hairpin:
ac        a     -    U     UC  A      agua 
  gauaugaa uAAGU GGAG AGUGG  UC UCGcuu    u
  |||||||| ||||| |||| |||||  || ||||||     
  cuauacuu AUUCA CCUC UCAUC  AG AGUgaa    u
au        A     G    U     UU  -      aaga 


mirna_id: aae-mir-1174
hairpin:
acuccaauuc        --u      cu     uaguuacgu      a   ac     uucu    u 
          uggguauu   uagauc  uggca         gauuga ugc  uguuc    uugg u
          ||||||||   ||||||  |||||         |||||| |||  |||||    |||| u
          ACCCAUAA   AUCUAG  ACUgu         cuaacu gcg  acaag    gacc a
--------aU        UUC      --     ---------      -   -c     cuau    c 


mirna_id: aae-mir-993
hairpin:
ag   u   cc    cc    -      UUC          -     ucuuu 
  cgc ccu  guga  UACC CUGUAG   CGGGCUUUUg ugguu     u
  ||| |||  ||||  |||| ||||||   |||||||||| |||||      
  gug gga  cacu  augg gauauc   gcucgaagac auuaa     a
aa   -   --    cu    a      uuu          u     uuguu 


mirna_id: aae-mir-981
hairpin:
aaa      -c  gau         -    g        u caccau 
   ccuugc  ug   cggguuucg cggc aacgggcu c      g
   ||||||  ||   ||||||||| |||| |||||||| |       
   ggaacg  ac   GUCCAAAGC GCUG UUGCUUga g      a
-ac      uu  -AC         A    -        c auaagu 


mirna_id: aae-mir-965
hairpin:
gauu     gg      uc         g    uug   u 
    cugaa  gggaaa  cuguacgcu uaug   uau u
    |||||  ||||||  ||||||||| ||||   |||  
    ggcUU  CCCUUU  GAUAUGCGA AUac   aua g
-ugc     -A      UC         -    cua   a 


mirna_id: aae-mir-932
hairpin:
-gua     --     a      A       G   A       g  - u 
    aucau  agaau gcuUCA UUCCGUA UGC UUGCAGu ug c u
    |||||  ||||| |||||| ||||||| ||| ||||||| || |  
    uagua  ucuua cGAAGU AAGGUGU ACG AACGUca gc g u
cuac     ac     g      G       A   -       a  a a 


mirna_id: aae-mir-927
hairpin:
gg    c          cu       a   u     g 
  uuug uuuagaauuc  acgcuuu ccg gauuu u
  |||| ||||||||||  ||||||| ||| ||||| u
  aagC AAGUCUUGGG  UGCGAAA ggu uugaa g
ca    A          UU       C   -     a 


mirna_id: aae-mir-309a-1
hairpin:
auccaccgaaug         u     c       uu    -----ucau  g 
            uuaugcgac aacuu guucagu  ggug         ac a
            ||||||||| ||||| |||||||  ||||         ||  
            aauaCGCUG UUGAA CGGGUCA  CUac         ug a
---------gua         U     A       --    uuugaccuu  g 


mirna_id: aae-mir-309a-2
hairpin:
uccaccgaaug         u     c       uu    -----ucau  g 
           uuaugcgac aacuu guucagu  ggug         ac a
           ||||||||| ||||| |||||||  ||||         ||  
           aauaCGCUG UUGAA CGGGUCA  CUac         ug a
--------gua         U     A       --    uuugaccuu  g 


mirna_id: aae-mir-285
hairpin:
---------guu       -  --a       gc   c  a    ag    -  gcau 
            aaucuuc cu   aguacug  uuc aa ggug  uaga ug    u
            ||||||| ||   |||||||  ||| || ||||  |||| ||     
            uuagaag gg   uCAUGAC  AAG UU CCAC  AUcu ac    c
agugcgucuugu       c  aag       UA   C  A    -G    c  auag 


mirna_id: aae-mir-137-1
hairpin:
-uucauc     a    g ug  c   c       ug   uau     c  ug 
       gagca cuug u  gc acg guauucu  ggu   uaaca ac  u
       ||||| |||| |  || ||| |||||||  |||   ||||| ||  u
       uuugu gaac a  uG UGC CAUAAGA  UCG   AUugu ug  u
gcuacac     -    - gu  A   A       GU   -UU     -  ua 


mirna_id: aae-mir-137-2
hairpin:
uauucauc     a    g ug  c   c       ug   uau     c  ug 
        gagca cuug u  gc acg guauucu  ggu   uaaca ac  u
        ||||| |||| |  || ||| |||||||  |||   ||||| ||  u
        uuugu gaac a  uG UGC CAUAAGA  UCG   AUugu ug  u
----acac     -    - gu  A   A       GU   -UU     -  ua 


mirna_id: aae-mir-133
hairpin:
--cucg a       aa             cuuc  gu     --cg   -------       g 
      g aucgcug  uauagcugguuga    gg  caaau    uca       aauauuu c
      | |||||||  |||||||||||||    ||  |||||    |||       |||||||  
      c uagugac  aUGUCGACCAACU    CC  GUUua    agu       uuauaga a
acauua g       -g             -UCC  UG     cuaa   gacuccu       a 


mirna_id: aae-mir-31
hairpin:
cgag   u       u  -aagg    guuug   agug       -caacuU       U     C         agu 
    auu ugggaga ug     ucgu     cag    aaauugg       GGCAAGA GUUGG AUAGCUGAa   u
    ||| ||||||| ||     ||||     |||    |||||||       ||||||| ||||| |||||||||   u
    uag gccuuuu gc     agca     guu    uuuaacc       cuguucu caacu uaucgauuu   u
----   u       u  ggaga    --aca   ---a       uuuuuau       u     -         gag 


mirna_id: aae-mir-10
hairpin:
uu          cu   -  G    U           ugaauau 
  uguucuacau  ACC CU UAGA CCGAAUUUGUU       u
  ||||||||||  ||| || |||| |||||||||||        
  acggggugug  ugg ga aucu ggcuuaaacag       u
uu          uu   a  g    u           cgaacaa 


mirna_id: aae-mir-iab-4-1
hairpin:
     a  -a            U    C   Ag  c 
gcuuc ug  ACGUAUACUGAA GUAU CUG  ug u
||||| ||  |||||||||||| |||| |||  || a
cggag aC  UGCAUAUGACUU CAUA GGC  au u
     g  AA            C    U   cu  c 


mirna_id: aae-mir-283
hairpin:
------g              CA       C   U         Cuuaccccac 
       uucgacugaaaggu  AUAUCAG UGG AAUUCUGGG          c
       ||||||||||||||  ||||||| ||| |||||||||           
       gagcugauuuuuca  uauaguc acc uuaaggccc          g
acuggua              cc       a   -         uucgcauauu 


mirna_id: aae-mir-988
hairpin:
            U C    UG    --U  -   -     
gcugcggguGUG G UUUG  ACAA   GA GAu ucgg 
|||||||||||| | ||||  ||||   || ||| ||| u
uggcguuCGCAC C AAAC  UGUU   Cu cua agcu 
            U C    GU    CCC  a   u     


mirna_id: aae-mir-124
hairpin:
uuuu   c      c      cg    a    ---u  ua 
    cuc ugguau cacugc  gccu uaug    cc  u
    ||| |||||| ||||||  |||| ||||    ||   
    gag acCGUA GUGGCG  CGGA AUac    gg  u
--gc   a      A      CA    -    ucau  cu 


mirna_id: aae-mir-2940
hairpin:
  u           A       AG     uuauuuuacc        uuucuuuuc    g 
ca UGGUUUAUCUU UCUGUCG  GCaag          ggauagug         guga c
|| ||||||||||| |||||||  |||||          ||||||||         ||||  
gU ACUAAAUAGAG GGACAGC  UGuuc          ccuaucac         cacu a
  C           -       --     ---uucucga        ---------    a 


mirna_id: aae-mir-2765
hairpin:
-a      uc   a  c   U       - CA        gaua 
  aacguu  cgg gc UGG AACUCCA C  CCGUUGGC    u
  ||||||  ||| || ||| ||||||| |  ||||||||    u
  uugcaa  gcc ug gcc uugaggu g  gguaaccg    u
ac      --   g  c   c       c ag        acag 


mirna_id: aae-mir-2941-1
hairpin:
aug     a     acc  u       -ug     a         ugauuuuu 
   gauua guugu   ac uucgugg   uuuag cguauuaca        u
   ||||| |||||   || |||||||   ||||| |||||||||         
   cugau uaacg   ug aGGCACC   AGAUC GCAUGAUgu        g
cua     a     -gu  u       UCA     G         caauacaa 


mirna_id: aae-mir-2941-2
hairpin:
caa     gc           a  c  -     c      c aua  g 
   gaaug  gauuguucgug ag uc agcug auuaca g   ug a
   |||||  ||||||||||| || || ||||| |||||| |   || a
   uuuac  uuaacaGGCAC UC AG UCGGC UGAUgu u   gc u
aug     -a           C  A  A     A      u --g  a 


mirna_id: aae-mir-33
hairpin:
     c  -G          UU C        uuu c   c 
ccacc gg  UGCAUUGUAG  G AUUGCAcu   g guu g
||||| ||  ||||||||||  | ||||||||   | |||  
ggugg cc  acguaacguc  c uaacgugg   c caa a
     a  ga          uu a        --- a   u 


mirna_id: aae-mir-279
hairpin:
acaucc    gg    cg         a      uguu     u auuu 
      caac  uugu  augggugug aucuag    ucaca g    u
      ||||  ||||  ||||||||| ||||||    ||||| |    c
      guug  aacA  UACUCACAC UAGAUC    AGUgu c    g
--ggcc    aa    AU         C      ----     c gaua 


mirna_id: aae-mir-263a
hairpin:
----------u   -     ac uA   G     GA    UU      u  auu 
           ccu aguac  g  AUG CACUG  AGAA  CACGGg au   u
           ||| |||||  |  ||| |||||  ||||  |||||| ||    
           gga ucaug  C  UAC GUGAC  UCUU  GUGCcc ua   u
gacuacuuagu   a     gu CC   G     GG    --      c  aag 


mirna_id: aae-mir-7
hairpin:
uc    u        U        A U     --       -   c 
  gcaa auuuugua GGAAGACU G GAUUU  UGUUGUu uug u
  |||| |||||||| |||||||| | |||||  ||||||| |||  
  cguu ugaaacau cuuucuga c cuaaa  acaauaa agc u
gu    -        -        a u     ua       u   a 


mirna_id: aae-mir-100
hairpin:
   uag      ------      cc    u      A      G     AA      - -  ccg 
gcg   ugguug      uaguua  cauu gcaggA CCCGUA AUCCG  CUUGUG c ug   u
|||   ||||||      ||||||  |||| |||||| |||||| |||||  |||||| | ||    
ugu   gcuagc      aucggu  guag cgucuu ggguau uaggc  gaacau g ac   u
   uua      uacgaa      au    c      a      g     aa      u u  acu 


mirna_id: aae-mir-970
hairpin:
aac   -a   cg       u        u    u       gc       gaau 
   ggu  uug  gcuuuca agguagcu gcgu ugucuua  ugguauu    g
   |||  |||  ||||||| |||||||| |||| |||||||  |||||||     
   cua  aac  ugagagu uuUAUCGG CGCA ACAGAAU  ACUaugg    u
guu   cg   ua       u        -    C       --       auag 


mirna_id: aae-mir-210
hairpin:
cucauugc     c  ac   -         -   g 
        agcug ug  cac ugcacaaga uua a
        ||||| ||  ||| ||||||||| ||| u
        ucGGC AC  GUG GCGUGUUCu agu u
----guua     A  -A   U         c   a 


mirna_id: aae-mir-79
hairpin:
----gaa    --ucg            CGC       G     uagaau 
       ccca     uccauGCUUUGG   UUUAGCU UAUGA      u
       ||||     ||||||||||||   ||||||| |||||       
       gggu     aggUACGAAACC   AGAUCGA AUacu      u
cuguggc    ucgga            AUU       A     uuauaa 


mirna_id: aae-mir-307
hairpin:
cuaguuuc   g      a  a         ccu  g       c  a 
        ccg cagucg uc cucacucaa   gg ugugaug uu u
        ||| |||||| || |||||||||   || ||||||| || u
        ggu guuagc AG GAGUGAGUU   CC ACACuac aa u
--------   a      c  C         CCU  A       u  g 


mirna_id: aae-mir-1000-1
hairpin:
-c   uuuu       ac    uAUAU       UC         cuguu 
  gau    gcuagaa  cgau     UGUCCUG  ACAGCAGUa     a
  |||    |||||||  ||||     |||||||  |||||||||      
  cug    cgaucuu  guua     acagggc  uguugucau     c
ca   ---c       -a    cauuu       uu         uuaaa 


mirna_id: aae-mir-375
hairpin:
---u           aguu   ua    c    u   ga    ugaa    -aau    uuc 
    ggaagaauccg    acu  agcc aacg aca  aacu    ucug    gccg   u
    |||||||||||    |||  |||| |||| |||  ||||    ||||    ||||    
    ucuucuuaggc    UGA  UCGG UUGC UGU  UUga    agau    cggu   a
cuag           guAU   GC    U    U   --    ----    cguu    uag 


mirna_id: aae-let-7
hairpin:
    u    G    U             ugacug 
cacg UGAG UAGU GGUUGUAUAGUag      a
|||| |||| |||| |||||||||||||      u
gugc guuc aucg cuaacguaucguc      u
    u    g    u             uauaaa 


mirna_id: aae-mir-2942
hairpin:
    -uu  c      c  u        ac     uacauug 
aaug   au aauucg ug ggucucga  guacc       g
||||   || |||||| || ||||||||  |||||        
uuac   UA UUGAGC AC UCAGAGCU  UAUgg       a
    ccu  A      -  U        --     uuuuuau 


mirna_id: aae-mir-2943-1
hairpin:
    a ug    UAA     CACUU    G    guuuc 
ccca u  augU   GUAGG     GCAG CAAA     a
|||| |  ||||   |||||     |||| ||||     u
gggu a  uaca   caucc     cguc guuu     u
    g gu    uuc     uuuuu    a    aacac 


mirna_id: aae-mir-2943-2
hairpin:
     U       CACUU    G   Au ug  gc 
gaugU AAGUAGG     GCAG CAA  u  ua  u
||||| |||||||     |||| |||  |  ||  u
uuaca uucaucc     cguc guu  a  au  u
     u       uuuuu    a   -- gu  aa 


mirna_id: aae-mir-2944a
hairpin:
        GA  UU          C  Agu 
cguuGAAG  AC  CUGCUGUGAU UG   u
||||||||  ||  |||||||||| ||   a
guAAUUUC  UG  GAUGACACUA ac   g
        -A  UU          U  aua 


mirna_id: aae-mir-2944b
hairpin:
aucGA   -    C C G         uga 
     AGG AACU C G UGUGAUAUA   c
     ||| |||| | | |||||||||   u
     UCC UUGA G C ACACUAUau   c
uauAG   A    U A G         uag 


mirna_id: aae-mir-193
hairpin:
        --   ---aauu       u   ac        u    a    a  auuucc  c 
gcuugcua  ugu       uuuucaa cga  ugggauuu gugg ccag ag      uc a
||||||||  |||       ||||||| |||  |||||||| |||| |||| ||      || u
cgaacgau  aca       aaagguu guu  ACCCUGAA CAUC GGUC Uc      ag u
        ag   gccuguu       u   CA        U    C    A  gauaau  c 


mirna_id: aae-mir-2b
hairpin:
  -     u     a   -      -         a   -  uuu 
gg gcgua ucuag cuc ucaaag uggcuguga aug gu   a
|| ||||| ||||| ||| |||||| ||||||||| ||| ||    
cc cgcgu aggUC GAG AGUUUC ACCGACACU Uac cg   u
  a     c     -   U      G         A   u  uuu 


mirna_id: aae-mir-219
hairpin:
u   u    c  AU      AA           --uu    uc 
 uuc agcu UG  UGUCCA  CGCAAUUCUUG    uuau  g
 ||| |||| ||  ||||||  |||||||||||    ||||   
 aag ucgg gc  acaggu  guguugagaac    agua  a
a   c    u  cu      ca           cuau    ua 


mirna_id: aae-mir-2c
hairpin:
u      -g       u        uu   uacgaccu 
 gcguug  caucaaa uugguugu  uag        c
 ||||||  ||||||| ||||||||  |||        u
 cgcaaC  GUAGUUU GACCGACA  AUc        u
a      GA       C        CU   cccaaagu 


mirna_id: aae-mir-263b
hairpin:
    -    ac    CU      UG     A        -----c  u 
gacc aauu  gaac  UGGCAC  GGAGA UUCACAGg      gc a
|||| ||||  ||||  ||||||  ||||| ||||||||      || u
cugg uuaa  uuUG  ACCGUG  UUUCU AGGUgucu      cg u
    c    -a    CU      CU     -        uacuau  u 


mirna_id: aae-mir-276-2
hairpin:
---ggugaagugugcaguaauuagugccagguagguuagauuuccaguguc      u      uc    a     ag          cguuc       
                                                   ucgagu aauccg  agcg gguau  aguuccuaug     ggauaa 
                                                   |||||| ||||||  |||| |||||  ||||||||||     ||||| a
                                                   gguucg uuaggu  UCGU CCAUA  UCAAGGAUac     cuuaua 
cuacuaaauguuuaaucggugcuugaaggugguaaugggagagcuacugaa      -      uC    G     CU          -----       


mirna_id: aae-mir-282-1
hairpin:
aucguc     -ca    -c  ---a     guA           CC      U      uuac  uccu   g 
      aucgu   ucgu  gc    caggu   AUCUAGCCUCU  UAGGCU UGUCUG    cu    ugg a
      |||||   ||||  ||    |||||   |||||||||||  |||||| ||||||    ||    ||| a
      uggca   ggca  ug    gucua   uGGAUUGGAGA  GUCCGA ACAgac    ga    acc u
------     acc    ac  aaaa     aag           CA      U      ---c  --uc   u 


mirna_id: aae-mir-286b-1
hairpin:
   u      --    u   -   cu         uaucauuuc        
aag ccuggg  gcga ugu cgg  uagucgcug         aacugcu 
||| ||||||  |||| ||| |||  |||||||||         |||||| g
uuc ggaCCC  UGCU ACA GCC  AUCAGUgau         uugacgu 
   c      UA    C   A   AG         ---cgcuuc        


mirna_id: aae-mir-286a
hairpin:
     ua         --au   -   a          cguacaaaacg 
aucgu  uuuggggcg    ugu cgg cuagucgcug           g
|||||  |||||||||    ||| ||| ||||||||||            
uagca  aaaUCCUGC    ACA GCC GAUCAGUgau           a
     cg         GCUC   A   A          caacuuuauca 


mirna_id: aae-mir-2945
hairpin:
-   -              C       GU      ugc   au 
 ucu gaucugAGCGGGUC GUUUCUA  GUCAUG   ugu  u
 ||| |||||||||||||| |||||||  ||||||   |||   
 ggg cuggAUUUGCUCAG CGGAGAU  CAGUac   aua  c
a   u              A       --      --u   ag 


mirna_id: aae-mir-316
hairpin:
ccaacauu        uu          ----C   UACUGCCGguggc 
        uugauuga  UGUCUUUUUC     GCU             a
        ||||||||  ||||||||||     |||             u
        aacuaacu  gcggaaaaag     cga             u
------uu        cc          ccaaa   cagcucuuaaagu 


mirna_id: aae-mir-317-2
hairpin:
   a  uc      c       -   --     c     uugcau 
gga uu  ggcuac gggauac acc  cugug ucgcu      u
||| ||  |||||| ||||||| |||  ||||| |||||       
ccu aa  ccggug cUCUAUG UGG  GACAC AGUga      c
   -  uc      a       G   UC     A     ucaaag 


mirna_id: aae-mir-309b
hairpin:
u      U      CC       --   --     u 
 uaugCG CAAACU  GUUCAGU  UGG  UGgag c
 |||||| ||||||  |||||||  |||  ||||| a
 auACGC GUUUGA  CGGGUCA  acu  accuu u
a      U      UA       CU   ga     u 


mirna_id: aae-mir-92b
hairpin:
    -cgaa         U   UU    CC     -  gaau 
gcuc     uguAGGUCG GAC  GUGC  GUUUG cu    u
||||     ||||||||| |||  ||||  ||||| ||     
cgag     aCGUCCGGC CUG  CACG  UAAac gg    u
    aaccg         C   UU    -U     u  uaau 


mirna_id: aae-mir-9a-1
hairpin:
     -a   cU       UAU      G     -  gaa 
gucaa  guu  CUUUGGU   CUAGCU UAUGA gu   u
|||||  |||  |||||||   |||||| ||||| ||   u
caguu  uaa  gaagcca   gaucga auacu ca   u
     ga   uu       uac      a     a  aga 


mirna_id: aae-mir-9b
hairpin:
    -         aUC         UUU          ----u  ua 
ucac guuuauugg   UUUGGUGAU   AGCUGUAUGC     ga  c
|||| |||||||||   |||||||||   ||||||||||     ||   
agug uaaguaauc   aaaccacua   ucgauauacg     cu  g
    g         caa         -uu          uuagu  uu 


mirna_id: aae-mir-2946
hairpin:
       aa     g          a   c       uuucau 
uaugaac  ugauc ccauauuuuu ccg uacugca      u
|||||||  ||||| |||||||||| ||| |||||||      g
auacuug  guuAG GGUAUAGAAA GGC AUGAUgu      u
       gg     G          A   -       uaauaa 


mirna_id: bmo-mir-1000
hairpin:
    -          AUA      U U A        -  u 
ggcg cgucgcggcc   UUGUCC G C CAGCAGUa cu g
|||| ||||||||||   |||||| | | |||||||| ||  
ccgc gcggcgccgg   aacagg c g gucgucau ga g
    c          ccg      u u c        c  a 


mirna_id: bmo-mir-iab-8
hairpin:
     au       U            G    A  G  -caa a 
guguc  cuucugU ACGUAUACUGAA GUAU CC ga    g a
|||||  ||||||| |||||||||||| |||| || ||    | u
cgcag  gaagaca ugcauaugacuu caua gg cu    c c
     cg       -            a    -  a  cacg g 


mirna_id: gra-MIR398
hairpin:
-----------------  c      -guu               cc    a          uc  cccu 
                 gc aagaug    uaccccagaggggug  accu agaacacagg  au    u
                 || ||||||    |||||||||||||||  |||| ||||||||||  ||    a
                 cg uucuau    augggguUUCCCCAC  UGGA UCUUGUGUuc  ua    a
cguuuguuuucccuuac  c      auac               --    C          ga  aacc 


mirna_id: gra-MIR482
hairpin:
     -       -      acc  uu         uuc       -                  ga   uucucug 
gaagg aggaaaa ggagag   gu  cuggaaauu   ggaaugg aggaguuggaaagauuuu  auu       u
||||| ||||||| ||||||   ||  |||||||||   ||||||| ||||||||||||||||||  |||        
uuucc uucuuuu ccucuc   ca  gaccuuuag   CCUUACC UCCUUAACCUUUCUaaaa  uaa       a
     a       a      cuu  -c         uca       C                  ag   uaauuuu 


mirna_id: gar-MIR2947
hairpin:
    u  ua  c  a     -                  a        uu   ugauu 
agcu gu  ag ga guuac guuaugggcaugguaugg uugcuguu  uga     u
|||| ||  || || ||||| |||||||||||||||||| ||||||||  |||     g
ucga cg  uc cu cGAUG CAGUACCCGUGCCAUAUu aacgacaa  acu     u
    -  gc  a  a     U                  a        uu   uucgu 


mirna_id: ghr-MIR164
hairpin:
        uau   u  u        CA            -    -  au 
ggggugag   cuc ug UGGAGAAG  GGGCACGUGCAa guuc cu  g
||||||||   ||| || ||||||||  |||||||||||| |||| ||  u
ucuuacuc   gag gc accucuuc  cucgugcacguu caag ga  u
        uuu   u  c        cc            u    u  au 


mirna_id: ghr-MIR167a
hairpin:
     aa     A    - -            u  ucc        -gau  g 
gggaa  agUGA GCUG C CAGCAUGAUCUA cu   guuaguaa    gc g
|||||  ||||| |||| | |||||||||||| ||   ||||||||    ||  
uccuu  ucacu cgac g gucguacuggau ga   caaucguu    cg a
     cc     c    a c            c  ucc        auau  u 


mirna_id: ghr-MIR172
hairpin:
       gu    ug   g          a     a     ---uu     ucuuuuu          
agucacu  uugc  uug agcaucauca gauuc caauu     agggu       ugauugauu 
|||||||  ||||  ||| |||||||||| ||||| |||||     |||||       |||||||| u
ucgguga  aacg  GAC UCGUAGUAGU CUAAG guuag     uuccg       acuaacuag 
       au    gu   G          C     A     uauuu     -------          


mirna_id: ghr-MIR393
hairpin:
         c   A            U         -uuga   ugggcuuccuugaaaaccuuaacga 
gguggagag UCC AAGGGAUCGCAU GAUCUaaug     uga                         a
||||||||| ||| |||||||||||| |||||||||     |||                         u
cuaccuuuu agg uucccuagcgua cuagguuac     acu                         u
         a   c            -         ccaug   ugacuuaguuguuuuuaguuauuaa 


mirna_id: ghr-MIR394b
hairpin:
     g          cuuug        c a         U   U  A       ugaug      uucuuaccuacccaacu 
uaggg uucuuagagg     uugcagag c auUUGGCAU CUG CC CCUCCau     uacuuc                 u
||||| ||||||||||     |||||||| | ||||||||| ||| || |||||||     ||||||                  
auccc aagagucucu     aaugucuc g uaaacugua gac gg ggaggua     augaag                 a
     a          cuuua        a a         u   c  c       -----      uuucuguuuaguaaaau 


mirna_id: ghr-MIR394a
hairpin:
u  uu   ug       a        cuu  u       u  -      U C           --------   ucau       gu 
 gc  uca  gggguuu gcaaaggg   cu acagagu ua UUGGCA U UGUCCACCUCC        cca    ggaaaaa  c
 ||  |||  ||||||| ||||||||   || ||||||| || |||||| | |||||||||||        |||    |||||||  c
 cg  agu  uccuaaa uguuucuc   gg ugucucg gu aaccgu a acggguggagg        ggu    ccuuuuu  g
a  -u   gu       a        uuc  u       u  c      c u           uacuuuuu   cucc       au 


mirna_id: ghr-MIR398
hairpin:
  c      -guu               cc    a          uc  cccu 
gc aagaug    uaccccagaggggug  accu agaacacagg  au    u
|| ||||||    |||||||||||||||  |||| ||||||||||  ||    a
cg uucuau    augggguUUCCCCAC  UGGA UCUUGUGUuc  ua    a
  c      auac               --    C          ga  aacc 


mirna_id: ghr-MIR479
hairpin:
g        g   c  C                  AU   auu  gau 
 gaggagua aca ga GUGAUAUUGGUUCGGCUC  Cuu   gu   u
 |||||||| ||| || ||||||||||||||||||  |||   ||    
 uuuuucgu ugu cu cacuauaacuaagccgag  gaa   ua   a
u        a   a  -                  cg   cuu  aaa 


mirna_id: ghr-MIR482a
hairpin:
    -uu    ag    ag     aa   uu  c      uua   aa      u    -            a   u uc     ag 
auug   aaag  ggaa  ggaga  gag  gc gggagu   ugg  guggga gggu ggaaagauuugu uuu c  ucuug  u
||||   ||||  ||||  |||||  |||  || ||||||   |||  |||||| |||| |||||||||||| ||| |  |||||   
uagc   uuuc  ucuu  ccucu  uuc  ug ccuuua   aCC  UACCCU CUCA CCUUUCUaaacg aaa g  agaau  u
    ucu    au    ca     cc   -u  a      uuc   -A      C    U            -   u ua     cu 


mirna_id: ghr-MIR482b
hairpin:
      -gau    a     cuua    u    a     c    g       -  gg         a     uguuu        -----------  g 
agagac    ggag aggag    ggau cuag aagcu gugg augggug ag  gguaagaca uggac     cagucuuu           ug a
||||||    |||| |||||    |||| |||| ||||| |||| ||||||| ||  ||||||||| |||||     ||||||||           ||  
ucucug    ccuc uccuc    cuug gguc uuugg caCC UACCCAC UC  CCGUUCUgu auuug     gucggaag           ac a
      aaau    c     ----    u    c     u    G       C  AU         -     -----        aagaaauaaag  a 


mirna_id: ghr-MIR827a
hairpin:
     u  --u    ug        u              --       - aucucgccaauucuuuguucaagcaguu 
augca ug   ugaa  uguuuguu auggucaucuaagc  cauuuuu c                            u
||||| ||   ||||  |||||||| ||||||||||||||  ||||||| |                             
uacgu au   acuu  ACAAACAA UACCAGUAGAUUug  guaaaga g                            u
     u  ucu    ca        C              ua       c cccacaucagauagccaagcuaauaggu 


mirna_id: ghr-MIR827b
hairpin:
   -uu    -uu   gaaa     u  --u    ug        u              --       - aucucgccaauucuuuguucaagcaguu 
cuu   ucuu   cau    augca ua   ugaa  uguuuguu auggucaucuaagc  cauuuuu c                            u
|||   ||||   |||    ||||| ||   ||||  |||||||| ||||||||||||||  ||||||| |                             
gaa   agaa   gug    uacgu au   acuu  ACAAACAA UACCAGUAGAUUug  guaaaga g                            u
   uuu    cuu   -aac     u  ucu    ca        C              ua       c cccacauaagauagccaagcuaauaggu 


mirna_id: ghr-MIR827c
hairpin:
     --uu uu   ug        u              --       - aucucgccaauucuuuguucaagcaguu 
augca    g  gaa  uguuuguu auggucaucuaagc  cauuuuu c                            u
|||||    |  |||  |||||||| ||||||||||||||  ||||||| |                             
uacgu    c  cuu  ACAAACAA UACCAGUAGAUUug  guaaaga g                            u
     uauu uc   ca        C              ua       c cccacaucagauagccaagcuaauaggu 


mirna_id: ghr-MIR2948
hairpin:
-guaa   aa      --a    gg  -        ug a          -A     GC       auga      uu 
     gag  agggag   gagu  ug uugggagu  g ggUGUGGGAG  GUUGG  AAGAAUu    ccuuug  c
     |||  ||||||   ||||  || ||||||||  | ||||||||||  |||||  |||||||    ||||||  a
     uuc  ucccuu   cucg  gc aaccuuua  u ccauacccuc  caacc  uucuuaa    ggaaac  a
cuagg   cg      ccc    uu  c        gu c          cc     -a       -cgg      cu 


mirna_id: ghr-MIR2949a
hairpin:
           c  c           A          C A    aacugcguuguug 
gucuuaguuug gu uugACUUUUGA CUGGAUUUGC G cuug             a
||||||||||| || ||||||||||| |||||||||| | ||||              
uagagucgggc ca aAUUGAAAACU GACCUAAACG c gagc             u
           -  a           -          U c    ccaaaaccuuugg 


mirna_id: ghr-MIR2949b
hairpin:
         g        uuua   cu  -ucuuacu           c  c   U       A          C A    aacugcguuguug 
caugaugcu cucaguau    aua  gg        gucuuaguuug gu uug CUUUUGA CUGGAUUUGC G cuug             a
||||||||| ||||||||    |||  ||        ||||||||||| || ||| ||||||| |||||||||| | ||||              
guauuaugg ggguuaua    uau  uc        uagagucgggc ca aau gaaaacu gaccuaaacg c gagc             a
         a        ----   ag  uaagcauu           -  -   u       -          u c    ccaaaacauuugg 


mirna_id: ghr-MIR2950
hairpin:
     -   u   uua                   ug a  --------       u 
caugg guu aug   uauuccaucucuugcacac  g cu        agccagc u
||||| ||| |||   |||||||||||||||||||  | ||        ||||||| u
guacu uag uac   AUAAGGUGGGGGACGUGUG  u ga        ucgguug u
     a   u   uac                   GU g  cuucgacu       u 


mirna_id: ghr-MIR399c
hairpin:
      -u    g a         ----- g     aac 
agggcu  cucu c uuggcaggu     a augau   u
||||||  |||| | |||||||||     | |||||    
UUCCGG  GAGA G AACCGUcca     u uacua   c
      UU    G A         auuga g     cac 


mirna_id: ghr-MIR399d
hairpin:
u   -    ua        c       aa      a     -    uuu 
 gag gaau  cagggcaa ucuccuu  gcaaaa uggau gugc   u
 ||| ||||  |||||||| |||||||  |||||| ||||| ||||    
 cuc cuua  GUCCCGUU AGAGGAA  CGUuuu gcuua uacg   c
a   a    cc        U       AC      a     a    uuu 


mirna_id: hsv2-mir-H7
hairpin:
       -A       C UAA       -  g 
ggggagA  AGGGGUC G   CCAAAGG ug u
|||||||  ||||||| |   ||||||| || c
ccccuCU  UCCCCAG C   GGUUUcc gc u
       GC       C UUA       u  g 


mirna_id: hsv2-mir-H9
hairpin:
        U    -   C    aa    g  g 
CUCGGAGG GGAG UCG GGUg  gguc uc u
|||||||| |||| ||| ||||  |||| ||  
gagcCUCC CCUC GGC CCAC  UUag ag c
        U    U   U    CC    -  a 


mirna_id: hsv2-miR-H10
hairpin:
u       -     aa a   ------ ug    u 
 uuccccc ccuac  c gug      u  uccg u
 ||||||| |||||  | |||      |  |||| g
 aagggGG GGGUG  G CGU      g  gggu g
g       C     GG G   GGGguu gu    u 


mirna_id: cqu-mir-1174
hairpin:
-          UUU   UC    --    aguu 
 uuCUGGGUAU   AGA  AUCG  GCau    u
 ||||||||||   |||  ||||  ||||     
 gagacccaug   ucu  uagc  cgua    a
g          ccu   -u    ag    agag 


mirna_id: cqu-mir-125
hairpin:
uu       uuu        UC  U    C CU         --  aua 
  aguuuug   cugcugau  CC GAGA C  AACUUGUGA  cu   g
  |||||||   ||||||||  || |||| |  |||||||||  ||    
  uuagagc   ggcgauUA  GG CUCU G  UUGAACACU  ga   u
ac       --u        -U  C    A UU         uu  agu 


mirna_id: cqu-mir-iab-4
hairpin:
gc          a  -a            U    C   Ag  c 
  guacugcuuc ug  ACGUAUACUGAA GUAU CUG  ug u
  |||||||||| ||  |||||||||||| |||| |||  || a
  cauggcggag ac  ugcauaugacuu caua ggc  au u
ua          g  aa            c    u   cu  c 


mirna_id: cqu-mir-281-1
hairpin:
uu   --c   u      -   aaa           -UA     C      ag ga 
  cug   agu ucgaau gug   auaAAGAGAGC   UCCGU GACAGU  g  u
  |||   ||| |||||| |||   |||||||||||   ||||| ||||||  |  a
  gac   uua agcuua cau   uaUUUCUCUCG   AGGUA CUGUca  u  u
-u   aac   u      a   --g           UUA     -      cu ag 


mirna_id: cqu-mir-124
hairpin:
  uu   c             cg    g    ---u   a 
uu  cuc ugguguucacugc  gccu uaug    ccu u
||  ||| |||||||||||||  |||| ||||    |||  
ag  gag acCGUAAGUGGCG  CGGA AUac    gga u
  gc   a             CA    -    uuuu   g 


mirna_id: cqu-mir-1
hairpin:
g   aa            c        a   -  gauc 
 cga  guuccaugcuuc uugcauuc aua gu    u
 |||  |||||||||||| |||||||| ||| ||     
 gcu  cGAGGUAUGAAG AAUGUAAG Uau ca    u
g   cg            A        G   g  aagu 


mirna_id: cqu-mir-988
hairpin:
ga               U C    UG    --C  -    - ag 
  cccgcugcgggUGUG G UUUG  ACAA   GA GAuu c  c
  ||||||||||||||| | ||||  ||||   || |||| |   
  ggguggcguuCGCAC C AAAC  UGUU   cu cuaa g  u
gg               U C    GU    CCC  a    a uu 


mirna_id: cqu-mir-275
hairpin:
cc   aauc        a          -ag    a   gg    --    c 
  cgg    cuuccgau gcgcgcgcua   cagg acc  gacu  uggu a
  |||    |||||||| ||||||||||   |||| |||  ||||  |||| u
  gcc    gaaggcua ugcgCGCGAU   GUCC UGG  CUga  aucg u
cc   --gu        g          GAA    A   -A    cg    c 


mirna_id: cqu-mir-315
hairpin:
- a      c   aaa                A      --c   cau 
 g guguuu uau   aUUUUGAUUGUUGCUC GAAAGC   gug   u
 | |||||| |||   |||||||||||||||| ||||||   |||   c
 c cacaaa aua   ugagacuaaugacgag cuuucg   uac   g
a -      -   aac                -      ccu   aaa 


mirna_id: cqu-let-7
hairpin:
uc  u    c   --      G    U            uuaaaaa 
  gc gcuc cac  guUGAG UAGU GGUUGUAUAGUa       u
  || |||| |||  |||||| |||| ||||||||||||        
  cg cggg gug  CAAUUC AUCG CUAACGUAUCau       u
uc  -    a   uu      G    C            cuauaac 


mirna_id: cqu-mir-13
hairpin:
     -gu    a            cc     uacau    a 
guuca   ucgu aaaaugguugug  gugug     uuga c
|||||   |||| ||||||||||||  |||||     ||||  
caagu   AGCA UUUUACCGACAC  UAUac     aacu a
     uUG    G            --     -uuau    u 


mirna_id: cqu-mir-957
hairpin:
aa      uu     g              g       -guau   g 
  ggccau  ccggc uuaguuuugggcgg uuuuagu     uuc a
  ||||||  ||||| |||||||||||||| |||||||     ||| u
  uuggug  gguCG AGUCAAAACCUGCC AAAGUua     gag g
gc      gc     G              -       acuau   a 


mirna_id: cqu-mir-999
hairpin:
cc    a   g              g    ga    a     cau 
  gguc ccc cagggacgcggucu gcag  aaua uuugg   u
  |||| ||| |||||||||||||| ||||  |||| |||||    
  cuag ggg guuUCUGUGUCAGA UGUC  UUGU aaacu   a
uc    c   a              A    AA    -     uag 


mirna_id: cqu-mir-277
hairpin:
ua           -   gu    -            ua      uuccc 
  guuuuggagug cgu  caga agugcauuuaca  gguauu     g
  ||||||||||| |||  |||| ||||||||||||  ||||||      
  uaagaccuuaC GCA  GUCU UCACGUAAAUgu  uuauga     u
ac           A   UG    A            --      cgauu 


mirna_id: cqu-mir-965
hairpin:
cu    g  u     gg      uc         c    uug auu 
  ggca au cugaa  gggaaa  cugugcgcu uaug   c   u
  |||| || |||||  ||||||  ||||||||| ||||   |    
  ccgu ug gacUU  CCCUUU  GAUAUGCGA AUac   g   u
ac    g  c     -A      UC         -    cca cua 


mirna_id: cqu-mir-252-1
hairpin:
ga       aC        A U  C     AGaga 
  auucuuu  UAAGUACU G GC GCAGG     u
  |||||||  |||||||| | || |||||     u
  ugagaaG  AUUCGUGA C CG CGUCC     u
--       CU        A C  U     ccaag 


mirna_id: cqu-mir-993
hairpin:
ag   u   cc    cc    -      UUC          -    uaaca 
  cgc ccu  guga  UACC CUGUAG   CGGGCUUUUg uggu     a
  ||| |||  ||||  |||| ||||||   |||||||||| ||||      
  gug gga  cacu  auGG GAUAUC   GCUCGAAGac auua     a
aa   -   --    cu    A      UUU          u    uauaa 


mirna_id: cqu-mir-278
hairpin:
aa  -u     cuu   -            u     u  g     gugccauuu 
  gu  cuggu   ggu gcggacggacga agucu ca cgacc         g
  ||  |||||   ||| |||||||||||| ||||| || |||||         a
  cg  gaccg   cca ugUUUGCCUGCU UCAGG GU GCUgg         a
aa  uu     ---   a            U     -  G     guuucccaa 


mirna_id: cqu-mir-970
hairpin:
au       a    g    u    u       gu     ugcau 
  accuuuu aaga aguu gcgu ugucuua  uggua     u
  ||||||| |||| |||| |||| |||||||  |||||      
  uggaaaa uuuU UCGG CGCA ACAGAAU  ACUau     u
uc       c    A    -    C       --     uaaaa 


mirna_id: cqu-mir-283
hairpin:
ca    ug              CA       C   U         -cuuuc   a 
  gauu  uucggcugaaaggu  AUAUCAG UGG AAUUCUGGG      caa c
  ||||  ||||||||||||||  ||||||| ||| |||||||||      ||| c
  cugg  aagcugauuuuuca  uauaguc acc uuagggccc      guu c
-a    ua              cc       a   -         uucgcu   g 


mirna_id: cqu-mir-9
hairpin:
au   ua          c  a            CU    G     u  uga   ug 
  gcg  uaauuuccgg ug aUCUUUGGUAUU  AGCU UAGAa gu   gcu  u
  |||  |||||||||| || ||||||||||||  |||| ||||| ||   |||   
  cgu  guuaaggguc ac UGGAGACCAUGA  UCGA AUcuu ua   ugg  u
gu   uc          a  C            UU    A     c  ---   ca 


mirna_id: cqu-mir-305
hairpin:
aa     -     cu U         U  G     CU   ugcu 
  uguca caugu  A UGUACUUCA CA GUGCU  ggu    u
  ||||| |||||  | ||||||||| || |||||  |||     
  acagu gugua  u ACAUGAGGU GU CACGG  cca    u
ug     c     au C         U  A     -C   uagc 


mirna_id: cqu-mir-317-1
hairpin:
ga   a  uc      C       -   --     C     UUGCau 
  gga uu  ggcuac GGGAUAC ACC  CUGUG UCGCU      u
  ||| ||  |||||| ||||||| |||  ||||| |||||       
  ccu ag  ccggug cUCUAUG UGG  GACAC AGUga      c
ag   -  uc      a       G   UC     A     ucaaag 


mirna_id: cqu-mir-981
hairpin:
aa   -      -c  gau         -      a       uacugauu 
  aca ccuugu  ug   cggguuucg cggcaa cgggcug        c
  ||| ||||||  ||   ||||||||| |||||| |||||||         
  ugu ggaacg  ac   GUCCAAAGC GCUGUU GCUUgac        g
aa   u      uc  -AC         A      -       uaaaaagu 


mirna_id: cqu-mir-100
hairpin:
-aaca  a   ----      u      A      G     AA      c  cccu 
     gc uuu    cccauu gcgggA CCCGUA AUCCG  CUUGUG ug    u
     || |||    |||||| |||||| |||||| |||||  |||||| ||    u
     cg aaa    ggguag cgucCU GGGUAU UAGGC  GAACau gc    u
agcua  a   aggu      c      A      A     CG      u  acau 


mirna_id: cqu-mir-989
hairpin:
-acuc     u      -ac        c    uu    u   u  ccaua a 
     gguca ggggaa   gccgcuac ucgc  ucac ugg gg     g u
     ||||| ||||||   |||||||| ||||  |||| ||| ||     |  
     ucggu ucccuu   UGGUGAUG AGUG  AGUG acc cu     c u
ccuua     -      cCA        C    -U    U   -  -auag u 


mirna_id: cqu-mir-1175
hairpin:
aaaaauuaucac        a     -    U     UC  A      agua 
            gauaugaa uAAGU GGAG AGUGG  UC UCGcuu    u
            |||||||| ||||| |||| |||||  || ||||||     
            uuauacuu auUCA CCUC UCAUC  AG AGUgaa    u
-caaagcucgau        a     G    U     UU  -      aaga 


mirna_id: cqu-mir-276-1
hairpin:
------   uuu      u  c   cu    A     AG          c  --   uu 
      gag   gaaagu ca ccg  AGCG GGUAU  AGUUCCUaug gu  uga  g
      |||   |||||| || |||  |||| |||||  |||||||||| ||  |||   
      cuu   cuuucg gu ggu  UCGU CCAUA  UCAAGGAUac ua  gcu  g
agacua   -gc      -  a   UC    G     CU          c  uc   ua 


mirna_id: cqu-mir-276-2
hairpin:
---c  --gugg     gauu    uc    A     AG         --   g  a 
    gu      uuggu    gcca  AGCG GGUAU  AGUUCCUac  guu cg g
    ||      |||||    ||||  |||| |||||  |||||||||  ||| ||  
    ca      agccg    cggu  UCGU CCAUA  UCAAGGAUg  uaa gc u
aaaa  acuuaa     --au    UC    G     CU         gc   a  u 


mirna_id: cqu-mir-276-3
hairpin:
-----caguuu      u  c   cu    A     AG          c  u  uuc 
           gaaagu ca cca  AGCG GGUAU  AGUUCCUaug gu gu   g
           |||||| || |||  |||| |||||  |||||||||| || ||    
           cuuucg gu ggu  UCGU CCAUA  UCAAGGAUac ua cg   a
agacuacuugc      -  a   UC    G     CU          c  u  cuu 


mirna_id: cqu-mir-12
hairpin:
aagauaaccugcuggugcucacgugucccgaaaagaagAAGAAUGAAAAUCCUGCCCUGUCGGAUU       -         
                                                                  GAGUAUU ACAUCAGG 
                                                                  ||||||| ||||||| U
                                                                  cuuauag ugUGGUCA 
------------------------------------------------------------------       c         


mirna_id: cqu-mir-210
hairpin:
cucauugc     C  AC   -         -   g 
        AGCUG UG  CAC UGCACAAGA uua a
        ||||| ||  ||| ||||||||| ||| u
        UCGGC AC  GUG GCGUGUUCu agu u
----guUA     A  -A   U         c   a 


mirna_id: cqu-mir-263
hairpin:
    ac uA   G     GA    UU      uau   u 
guac  g  AUG CACUG  AGAA  CACGGg   gau u
||||  |  ||| |||||  ||||  ||||||   ||| a
caug  c  uac gugac  ucuu  gugccc   cua a
    gu cc   g     gg    --      ---   u 


mirna_id: cqu-mir-92
hairpin:
a    -         c   ac       g    c   uugaca 
 ucaa ucuacgcau ggu  ggacagg gcaa auu      u
 |||| ||||||||| |||  ||||||| |||| |||      u
 gguu aggugcgua CCG  CCUGUUC CGUU uaa      u
c    g         U   GC       A    A   ucgaag 


mirna_id: cqu-mir-71
hairpin:
--     A        U            aguuuua   ugcauu 
  cggca GAAAGACA GGGUAGUGAGAU       ccc      c
  ||||| |||||||| ||||||||||||       |||       
  gucGU CUUUCUGU UCCAUCACUCUa       ggg      g
ua     A        -            -------   ccaaaa 


mirna_id: cqu-mir-190-2
hairpin:
g      uc      -            AU      U  u   auu 
 ggugau  cggugA GAUAUGUUUGAU  UCUUGG UG uaa   u
 ||||||  |||||| ||||||||||||  |||||| || |||    
 cuacug  gucauu uuauacaaacua  aggacc ac auu   u
-      gu      a            --      c  u   aua 


mirna_id: cqu-mir-190-1
hairpin:
g      uc      -            AU      U  u   auu 
 ggugau  cagugA GAUAUGUUUGAU  UCUUGG UG uaa   u
 ||||||  |||||| ||||||||||||  |||||| || |||    
 cuacug  gucauu uuauacaaacua  aggacc ac auu   u
-      gu      a            --      c  u   aua 


mirna_id: cqu-mir-1000
hairpin:
--uuuu       aa    uAUAU       UC         --  uu 
      gcuagaa  cgau     UGUCCUG  ACAGCAGUa  cu  u
      |||||||  ||||     |||||||  |||||||||  ||  c
      cgaucuu  guua     acagggc  uguugucau  ga  c
cacugc       -a    cauuu       uu         uc  uu 


mirna_id: cqu-mir-10
hairpin:
--          cu   -  G    U           ---  aau 
  uguucuacau  ACC CU UAGA CCGAAUUUGUU   ug   a
  ||||||||||  ||| || |||| |||||||||||   ||    
  acggggugug  UGG GA AUCU GGCUUAAACag   ac   u
uu          UU   A  G    U           cga  aaa 


mirna_id: cqu-mir-11
hairpin:
gug   c          C        CC    ugccccg 
   ccg gCGAGAACUC GGCUGUGA  ugug       u
   ||| |||||||||| ||||||||  ||||       g
   ggu CGUUCUUGAG CUGACACU  ACac       u
---   U          U        --    uucaagu 


mirna_id: cqu-mir-8
hairpin:
guc  uu -       -   G     C      --    u 
   ug  c aCAUCUU ACC GGCAG AUUAGA  uauu u
   ||  | ||||||| ||| ||||| ||||||  |||| u
   gc  g UGUAGAA UGG CUGUC UAAUcu  auaa u
--a  cu c       A   A     A      uc    a 


mirna_id: cqu-mir-285
hairpin:
aa      GC   C  A    AG    ug  auuc 
  guACUG  UUC AA GGUG  UAGA  gc    g
  ||||||  ||| || ||||  ||||  ||     
  CAUGAC  AAG UU CCAC  AUcu  cg    a
--      UA   C  A    -G    --  cuau 


mirna_id: cqu-mir-2
hairpin:
         ca    -     -         a     uccuc 
aacuguauc  cucu caaag uggcuguga auggu     c
|||||||||  |||| ||||| ||||||||| |||||     a
uuggcauag  GAGA GUUUC ACCGACACU Uaccg     g
         -C    A     G         A     cuaaa 


mirna_id: cqu-mir-137
hairpin:
-------a     g ug  c   c       ug   uac     c  ug 
        acuug u  gc acg guauucu  ggu   uaaca ac  u
        ||||| |  || ||| |||||||  |||   ||||| ||  u
        ugaac a  uG UGC CAUAAGA  UCG   AUugu ug  u
acaccuug     - gu  A   A       GU   -UU     -  ua 


mirna_id: cqu-mir-932
hairpin:
      A       G   A        uauuu 
gcuUCA UUCCGUA UGC UUGCAGug     u
|||||| ||||||| ||| ||||||||      
cgaAGU AAGGUGU ACG AACGUcau     u
      G       A   -        ccacu 


mirna_id: cqu-mir-14
hairpin:
-----------c   a  a   u       c    uu      u   ggu   ac 
            ccg ua gcc gugggag gaga  aaggcu gcu   uuc  g
            ||| || ||| ||||||| ||||  |||||| |||   |||   
            ggc au ugg UAUCCUC CUCU  UUCUGA Uga   gag  u
gagcaacuucgu   a  a   u       U    UU      C   aau   cu 


mirna_id: cqu-mir-279
hairpin:
u   cG         A       -------------     a 
 ugu  AUGGGUGUG AUCUAGU             GGUUC c
 |||  ||||||||| |||||||             |||||  
 acA  UACUCACAC UAGAUCA             ucgag a
a   AU         C       GUgucaaaccguu     u 


mirna_id: cqu-mir-996
hairpin:
aacu      u   c    u       -      g     uuuuc     c 
    caauuu cgu ggcg gcaugua ucuggu cacgg     aguug a
    |||||| ||| |||| ||||||| |||||| |||||     ||||| a
    guugaa gua cUGC CGUACAU AGAUCA GUgcu     ucgau u
----      -   u    U       U      -     -----     a 


mirna_id: cqu-bantam
hairpin:
agaaC         UUUUC     G    auuug 
     CGGUUUUCA     GAUCU ACuu     a
     |||||||||     ||||| ||||     u
     GUCGAAAGU     CUAGA Ugag     u
uuuuA         -UUUA     G    acaau 


mirna_id: cqu-mir-1891
hairpin:
--    uc        UGA         UU        uug a 
  uuuu  ugucaugu   GGAGUUAAU  GCGUGUUU   c u
  ||||  ||||||||   |||||||||  ||||||||   |  
  aaaa  guaguaca   ucucaauua  ugcacaaa   g u
cg    ua        ugg         cc        uua c 


mirna_id: cqu-mir-7
hairpin:
uc    u  u     U        A U     U      ug   ua 
  gcaa au uugua GGAAGACU G GAUUU GUUGUu  gcu  a
  |||| || ||||| |||||||| | ||||| ||||||  |||   
  cguu ug aacau cuuucuga c cuaaa uaacaa  uga  g
gu    -  c     -        c u     -      --   ua 


mirna_id: cqu-mir-184
hairpin:
---   u     ca         -     u  -  --c    u  u 
   gug auucg  cccuuauca uucuu cg cc   cgug ac g
   ||| |||||  ||||||||| ||||| || ||   |||| ||  
   cac ugggc  GGGAAUAGU AAGAG GC GG   gcgu ug u
uuc   -     cC         C     -  A  Uca    u  u 


mirna_id: cqu-mir-31
hairpin:
--------      -caacuU       U     C         agu 
        aauugg       GGCAAGA GUUGG AUAGCUGAa   u
        ||||||       ||||||| ||||| |||||||||   u
        uuaacc       CUGUUCU CAACU UAUCGAuuu   u
acaguuau      uuuuUAU       U     -         gag 


mirna_id: cqu-mir-1890
hairpin:
-          g     ug    c   u   auc  gu 
 uacggccaga cuaau  gaga uuc uga   gu  u
 |||||||||| |||||  |||| ||| |||   ||  g
 guguuGGUCU GAUUA  UUCU AAG acu   ca  u
g          G     GU    A   U   -ga  ag 


mirna_id: cqu-mir-980
hairpin:
acu     ucg             a  u      c  ac 
   acaau   gccuuucauuggg cg cuagcu gu  u
   |||||   ||||||||||||| || |||||| ||  u
   uguua   CGGGAAGUGAUCC GU GAUuga ca  g
---     uaa             -  C      -  aa 


mirna_id: cqu-mir-308
hairpin:
--                    gc    u ug u g 
  uuucgcaguauauucuugug  uuga g  u a a
  ||||||||||||||||||||  |||| |  | |  
  agaguGUCAUAUGAGGACAC  Aacu c  g u a
ag                    UA    - gu c a 


mirna_id: cqu-mir-79
hairpin:
ucg            CGC       G     uagaau 
   uccauGCUUUGG   UUUAGCU UAUGA      u
   ||||||||||||   ||||||| |||||       
   agguacgaaacc   agaucga auacu      u
-ga            auu       a     uuauaa 


mirna_id: cqu-mir-33
hairpin:
------  -G          -----        C  g     c 
      gg  UGCAUUGUAG     UUGCAUUG Ac uuuug g
      ||  ||||||||||     |||||||| || |||||  
      cc  acguaacguc     gacgugac ug aaagc u
ggugga  aa          uucau        c  a     u 


mirna_id: cqu-mir-2951
hairpin:
-gg    -GC    C    A ----      -   ac 
   aAGA   UCAG ACGC G    GGGUGG Cgc  u
   ||||   |||| |||| |    |||||| |||  A
   uuuU   GGUC UGUG C    CCCAUC GCG  C
cug    AAA    A    C UUGG      U   CC 


mirna_id: cqu-mir-2941-1
hairpin:
uac      -UG          G    uug      
   cCGUGG   UUUAGUCGUA UGCa   guuuu 
   ||||||   |||||||||| ||||   |||| u
   GGCACC   AGAUCGGCAU AUgu   caaga 
aua      UCA          G    ---      


mirna_id: cqu-mir-2941-2
hairpin:
       -    C         -    G      uugacga 
guUGAAU UUCG UGGAGUUCU GCCG Auugca       u
||||||| |||| ||||||||| |||| ||||||        
cagcuua aGGC ACCUCAAGA CGGC UGAUgu       u
       c    -         U    A      uuaaagg 


mirna_id: cqu-mir-2952
hairpin:
-ga   a      c     g       --   g 
   ucc caguca ggcug uacugca  uug c
   ||| |||||| ||||| |||||||  |||  
   GGG GUCAGU CCGGC AUGAUgu  agc u
cuC   A      A     -       cu   a 


mirna_id: cqu-mir-133
hairpin:
----cu   -   aa  g           cuuc  gu    ucgacaaauauuugcaaa 
      uca ccg  ca uagcugguuga    gg  caaa                  g
      ||| |||  || |||||||||||    ||  ||||                  a
      agu ggc  gU GUCGACCAACU    CC  GUUu                  u
uuaguu   u   ag  -           -UCC  UG    acuaaagaguuuccuuua 


mirna_id: cqu-mir-306
hairpin:
uu    C          -  A   U   c ugau  cau 
  ggcU AGGUACUGAG UG CUC CAG g    ac   u
  |||| |||||||||| || ||| ||| |    ||    
  ccgg uccauggcuc ac gag guc c    ug   u
--    u          c  -   u   - ---u  acc 


mirna_id: cqu-mir-87
hairpin:
aa      -       ca        -      aa    ggu 
  gauugu cucuggc  gccugaag uuugcu  accu   u
  |||||| |||||||  |||||||| ||||||  ||||   c
  cuaaca gaggcUG  UGGACUUU AAACGA  UGga   g
ca      a       UG        U      -G    acu 


mirna_id: cqu-mir-1889
hairpin:
-uu    c u     a U        A       A      uuuuucaacggcaaagcacaaacuuugaa 
   gcac g cccgg g AAUCUCAA UUGUAAC GUGGgu                             a
   |||| | ||||| | |||||||| ||||||| ||||||                              
   cgug c gggcc C UUGGGGUU GACAUUG CACcca                             c
ugc    - u     C U        A       -      uaucguuuacaagagagcuugccucccug 


mirna_id: cqu-mir-316
hairpin:
-------uu   c  cc   -aa  aaccccuu        uu          C C  A   C   u  uguu g 
         cac aa  ugg   cg        uugauuga  UGUCUUUUUC G UU CUG CGg gg    c a
         ||| ||  |||   ||        ||||||||  |||||||||| | || ||| ||| ||    |  
         gug uu  acu   gc        aacuaacu  gcggaaaaag c aa gac gcc cu    g a
aagaacccc   a  aa   gcc  aagacauu        cc          a a  c   a   -  ---- a 


mirna_id: cqu-mir-375-1
hairpin:
gu   uaac      au   aguu    a         u   cg      ggc   g 
  gcc    aggagc  ccg    acuc agccggacg aac  aaacuu   ucu c
  |||    ||||||  |||    |||| ||||||||| |||  ||||||   ||| u
  ugg    ucuucg  ggc    UGAG UCGGUUUGC UUG  UUUgag   agg g
-g   ---u      --   guAU    C         -   --      --a   u 


mirna_id: cqu-mir-309
hairpin:
-  -gc      --      u      cg       uug  g  cu 
 gc   ucgguu  uaugcg caaacu  gcucagu   gu aa  u
 ||   ||||||  |||||| ||||||  |||||||   || ||  u
 cg   aguuag  auaCGC GUUUGA  CGGGUCA   ca uu  g
a  gaa      ua      U      UA       CUa  g  ua 


mirna_id: cqu-mir-998
hairpin:
aca  -uguu     auu    ga     c        gu     -  g  uu 
   ga     ggcca   ccgg  cugaa ucucgugg  cugca gu cu  u
   ||     |||||   ||||  ||||| ||||||||  ||||| || ||  c
   cu     cuggu   ggcc  GACUU AGAGUACC  GAUgu ca gg  g
--g  uuguu     cgu    uC     -        AC     u  a  uu 


mirna_id: cel-mir-2953
hairpin:
--        U   C    AA     uaug 
  UACAGAAG GUU GUGA  AUaaa    u
  |||||||| ||| ||||  |||||    g
  AUGUCUUC CGA CACU  uauuu    u
CG        U   U    AG     uuuu 


mirna_id: gga-mir-2954
hairpin:
cug        -ug     a   u  ua -   a 
   agagggcu   gggag gga ug  g ugg g
   ||||||||   ||||| ||| ||  | |||  
   ucucucgA   UCCUC CCU AC  C ACc c
cgg        CGA     A   U  CC U   u 


mirna_id: tgu-mir-1329
hairpin:
  u   ug   a    CA               U  Auuucuc 
uc ggu  uag gaUA  GUGAUCAGGUUACGA GG       a
|| |||  ||| ||||  ||||||||||||||| ||        
ag uca  auc cuau  cacuaguucgaugcu cc       a
  u   gu   c    ag               -  aacaaug 


mirna_id: tgu-mir-2955
hairpin:
   c    a uuc    ug    a            ac        cu  aua   uu 
gug gagu c   cagc  cuuu gugcaaagucca  agcuuagc  ga   guc  c
||| |||| |   ||||  |||| ||||||||||||  ||||||||  ||   |||   
uac cuca g   gucg  gaaa UACGUUUCAGGU  UCGAAUcg  cu   cag  u
   a    c --u    gu    C            CU        ac  cga   uc 


mirna_id: tgu-mir-1451
hairpin:
   ca   g                G           A    C   uuca 
gag  agc caggagcugcugccUC CACAGGAGCAA UUAC GCG    g
|||  ||| |||||||||||||||| ||||||||||| |||| |||    c
cuc  ucg guccucggcgauggag guguccucguu aaug cgc    u
   -c   -                a           c    a   cuaa 


mirna_id: tgu-mir-1677
hairpin:
      - u        A  -GC            aag 
uagggu c gaUCCUGC CC   UGAAGUCAaugg   c
|||||| | |||||||| ||   ||||||||||||    
auucca g uuaggacg gg   acuucaguuacu   u
      a u        a  aua            guu 


mirna_id: tgu-mir-1805
hairpin:
gu    ua   u            C      -    --Agc   a 
  ggaa  uuc gggAGUUGUAGU UUUCAA ACAG     uuc c
  ||||  ||| |||||||||||| |||||| ||||     |||  
  ccuu  aag cccUCGACAUCA AAGGUU UGUc     agg a
cu    -c   u            C      A    cauac   a 


mirna_id: tgu-mir-2956-1
hairpin:
            a                       cug 
aagugggaauaa UAGGAAACCAGGCUUUAUUAGUu   a
|||||||||||| |||||||||||||||||||||||   u
uucauccuuauu auccuuugguccgaaauaaucaa   u
            c                       aua 


mirna_id: tgu-mir-2956-2
hairpin:
    a                                au 
aagu ggaauaagUAGGAAACCAGGCUUUAUUAGUuu  a
|||| ||||||||||||||||||||||||||||||||  a
uuca ccuuauuuauccuuugguccgaaauaaucaag  u
    c                                ac 


mirna_id: tgu-mir-2957
hairpin:
     ga           ag   a      g  auc 
ccgga  caaaguucugu  ugc cugacu cu   g
|||||  |||||||||||  ||| |||||| ||   u
ggccu  GUUUCAAGACA  GUG GGCUga ga   a
     uC           CU   A      -  ccc 


mirna_id: tgu-mir-2958
hairpin:
      -cu      a   ugaU        AGAU      C    cau  c 
gggagc   ggcugg gcc    GCUGGUGU    GUGUCA AGUg   cc c
||||||   |||||| |||    ||||||||    |||||| ||||   || a
cccucg   cugacc cgg    ugaccaca    cacggu ucac   gg g
      ucc      c   -uuu        --ac      c    --c  u 


mirna_id: tgu-mir-1784
hairpin:
uga         g                  g  a      agag 
   uuucuuggg cccaauucugcucuuauu aa ucagug    u
   ||||||||| |||||||||||||||||| || ||||||     
   ggagaaucc gggUUAAGACGAGGGUAA UU AGUuac    c
aca         a                  A  C      cguc 


mirna_id: tgu-mir-2959
hairpin:
u    --     ag           -        --AAG    -ug a 
 gggg  gguga  gagUUCCUGGA GUGAGCUG     GUUc   g g
 ||||  |||||  ||||||||||| ||||||||     ||||   |  
 cccc  ccacu  cucgaggaccu cacucgac     uagg   c c
a    gu     --           a        acuaa    uga u 


mirna_id: tgu-mir-1662
hairpin:
u             U AUA        guaug 
 gggcUUGACAUCA C   CUUGGGAU     a
 ||||||||||||| |   ||||||||      
 cccggacuguagu g   gaacccug     c
a             c gac        aagca 


mirna_id: tgu-mir-2960
hairpin:
  cc    c  u    g  g       gg      u     uccccuc 
gg  agag gg ggag ug aggcagc  cggguc ccucc       c
||  |||| || |||| || |||||||  |||||| |||||        
cc  ucuc uc ccuc AC UCCGUCG  GCUCAG GGAgg       c
  uc    -  -    G  G       --      C     uccucga 


mirna_id: tgu-mir-2961
hairpin:
      cc     c        - -      ------         ---  cc  u    ga     A       A G          CU   c 
cccggg  ccgcc gccgccuc c ccgucg      cccuucccc   gg  gc cgcg  ccggg GGAAGGU G GCGGGCGUCG  ccc c
||||||  ||||| |||||||| | ||||||      |||||||||   ||  || ||||  ||||| ||||||| | ||||||||||  |||  
gggccc  ggcgg cggcggag g ggcggu      gggaagggg   cc  cg gcgc  ggccc ccuuccg c cgcucgcggc  ggg a
      -u     -        c u      gccucg         aau  -c  u    -g     c       - g          uc   c 


mirna_id: tgu-mir-2962
hairpin:
    ug             C    A          --A   g 
gccc  ggaaggggAGGAG GAGG AGGGGAUGGG   ugg c
||||  ||||||||||||| |||| ||||||||||   ||| u
cggg  ccuuucCCUCUUC CUCC UCCCCUACcu   acc a
    gu             U    G          ggg   a 


mirna_id: tgu-mir-2963
hairpin:
    g  -    u   -g     -  a    u  g  c    uuggaa      ----        ga u      -c      g        g a 
ccag ag guuu ggg  uggcc uc ccuc ca ca ggau      uugagu    cacugggu  c ucccag  aucccu uuuccuuu g u
|||| || |||| |||  ||||| || |||| || || ||||      ||||||    ||||||||  | ||||||  |||||| |||||||| |  
gguc uc cgag ccu  gccgg gg ggag gu gu ucug      aacucg    gugacuuA  G AGGGUU  UAGGGA AAAggagg c c
    g  g    u   ag     u  a    -  g  -    -uagga      agcu        GA U      UU      -        g u 


mirna_id: tgu-mir-2964
hairpin:
    ga   cc      -      cgcc   gga  u   ac       aca   -        a         guu  uac g 
cccc  gaa  guccug gagccc    gga   gg gaa  cucugcu   gau guccagac caauucuug   cg   g c
||||  |||  |||||| ||||||    |||   || |||  |||||||   ||| |||||||| |||||||||   ||   |  
gggg  cuu  uagggc cucggg    ccu   cc cuu  gaggcga   cua CAGGUUUG GUUAAGAAC   gc   c u
    ac   -c      g      ---c   --a  -   -a       gga   A        C         -AC  -ua c 


mirna_id: tgu-mir-146a
hairpin:
u    c aa  uug    uu  c    cU           U           uuc  gu 
 guga g  ug   gcag  cc agcu  GAGAACUGAAU CCAUGGACUgg   ca  u
 |||| |  ||   ||||  || ||||  ||||||||||| |||||||||||   ||   
 cacu c  ac   cguc  gg ucga  CUCUUGACUUA GGUACCUGAcu   gu  c
a    u aa  -ua    --  u    -U           U           ugu  ac 


mirna_id: tgu-mir-458
hairpin:
     cg   a   c        c        ca       
ggugc  aug cag gccauuuc agagcuau  acagug 
|||||  ||| ||| |||||||| ||||||||  ||||| u
ucacg  uac GUC UGGUAAGG UCUCGAUA  uguuac 
     aa   C   U        U        -c       


mirna_id: tgu-mir-1729
hairpin:
     aca  -  ug       -    C        G    C    g   cua 
gguag   gg cc  auccugc AUCC UUACUCAC UGAG AGUC ucu   u
|||||   || ||  ||||||| |||| |||||||| |||| |||| |||   g
ccauc   cc gg  uaggacg uagg aaugagug gcuc ucag gga   u
     --a  a  gu       c    -        -    a    -   aac 


mirna_id: tgu-mir-2965
hairpin:
    --   -       g         --   ag 
cugu  gcu gccuguu cucuggggc  ucc  c
||||  ||| ||||||| |||||||||  |||  u
gaca  ugg cgGACGA GAGACUCCG  AGG  g
    ag   u       -         UC   AC 


mirna_id: tgu-mir-456
hairpin:
gu        g   g     uc       acau ug    c 
  guguguga cag caucu  ucagccu    g  gauu c
  |||||||| ||| |||||  |||||||    |  ||||  
  uacguaCU GUU GUAGA  GGUCGGA    C  cuaa u
cu        -   G     UU       ---- gu    a 


mirna_id: tgu-mir-425
hairpin:
      ug         U       U  CU    C  a  cag a 
gagaga  gcuuuggAA GACACGA CA  CCCG UG gc   c g
||||||  ||||||||| ||||||| ||  |||| || ||   | c
cuuucu  cgaaaccUU CUGUGCU GU  GGGC AC cg   g c
      --         U       -  AG    U  -  aga a 


mirna_id: tgu-mir-1803
hairpin:
  -acuu     a         g   au  u            a 
gg     agggc ugauccaga ccc  ug agucaaugggag c
||     ||||| ||||||||| |||  || ||||||||||||  
cc     uuccg acuAGGUUU GGG  AC UCAGUUAccuuu u
  aucau     g         G   CU  U            u 


mirna_id: tgu-mir-2966
hairpin:
     cg  g  -    u -g   -    ca     g    u 
ccccg  cc cg cccg g  cug cccg  gcgcu cccg g
|||||  || || |||| |  ||| ||||  ||||| |||| c
ggggc  GG GC GGGC C  GGC GGGC  Cgcga gggc u
     aa  -  A    - AG   A    --     -    c 


mirna_id: tgu-mir-2954
hairpin:
     ag     A   -  CU      GA   uu  ag 
ggagc  uGCUG GAG GG  UGGGGA  GGA  gu  u
|||||  ||||| ||| ||  ||||||  |||  ||   
ucucG  ACGAU CUC CC  ACCCCU  Ccu  cg  g
     --     C   A  UU      -A   --  ag 


mirna_id: tgu-mir-2967
hairpin:
      au        g         u  ua 
gacugc  guuuucua gauuuugau gu  a
||||||  |||||||| ||||||||| ||  u
uugacG  CAGGAGAU UUAAAACUA Ca  g
      AU        G         -  cc 


mirna_id: tgu-mir-460b
hairpin:
    -----u   c  u        cg  C  U       CA         aauu 
ccuc      cca ug ggcucuau  ug CC CAUUGUA  UGCUGUGUG    u
||||      ||| || ||||||||  || || |||||||  |||||||||    g
ggag      ggu ac ucgaggua  AC GG GUAACGU  GCGACAcau    u
    uccacc   a  -        au  A  U       AC         acac 


mirna_id: tgu-mir-2968
hairpin:
    ----c    --c        a  -   c        cu     cc     cg 
gcug     ccug   gaguugcu uc cuc aggucgcu  ggcag  cucgu  u
||||     ||||   |||||||| || ||| ||||||||  |||||  |||||   
cgac     ggac   uucgacga AG GGG UCCAGUGG  UCGUC  gagcg  u
    ccgcu    cac        c  C   U        -U     UC     ag 


mirna_id: tgu-mir-2969
hairpin:
    cu        uu       CA    U       A   A   aagaa  gu 
guuu  gugggagu  cuggguG  GCUG AGGAGCC GUG UGG     cg  u
||||  ||||||||  |||||||  |||| ||||||| ||| |||     ||   
cgaa  cauucucg  gaccuac  cggc uccucgg cgc acc     gu  u
    cc        --       -a    -       a   -   ---gg  au 


mirna_id: tgu-mir-2970
hairpin:
          u ug    g  agg   ucu   ca     -   c ug gG        C  U        ----   g 
agcauguccc c  gcca gc   ggu   ggg  gcucc ugc c  c  ACAGUCAG AG UGGUCUGG    ugu a
|||||||||| |  |||| ||   |||   |||  ||||| ||| |  |  |||||||| || ||||||||    ||| g
uuguacaggg g  cggu cg   cca   ccc  cgagg acg g  g  ugucgguu uc acuagacu    acg c
          - gu    a  gua   ---   ca     g   u gu gg        c  c        cuua   a 


mirna_id: tgu-mir-2188
hairpin:
              cu ug       -cuu  -   ---      ca   c       A     CA   U  C       guauag 
gagguuagauggca  u  ggguuuc    cu gag   gaauau  gac uguggga AGGUC  ACC CA AUGUCCU      a
||||||||||||||  |  |||||||    || |||   ||||||  ||| ||||||| |||||  ||| || |||||||       
uucuagucuaccgu  a  uccagag    ga cuc   cuuaug  cug acacccu uccag  ugg gu uauaggg      a
              ac gu       acuu  a   auu      uc   a       a     ac   u  a       agaaau 


mirna_id: tgu-mir-2971
hairpin:
gc     -u    uuaUA     U  AG   -       Uguu   uauuua 
  cugcu  gcug     AAGCC GU  GAU UGGGUCG    gga      a
  |||||  ||||     ||||| ||  ||| |||||||    |||       
  gacgg  cgac     uucgg ca  cua gucuagc    ccu      c
-c     uc    uaaag     u  cu   c       --uc   ucucuu 


mirna_id: tgu-mir-2972
hairpin:
       ug  a     a C   U  UC    C     -     ac   cc 
ccagacc  ca aggua U AGG GC  AACU CUAUU Uaggc  cag  u
|||||||  || ||||| | ||| ||  |||| ||||| |||||  |||  c
ggucugg  gu ucuau a ucc cg  uuga gauaa gucug  guc  c
       gu  c     a a   c  ga    a     a     aa   ac 


mirna_id: tgu-mir-2973
hairpin:
                              -GCa  ga 
aauucagaagCAUGGGAUAAUCGGAACAAG    cu  a
||||||||||||||||||||||||||||||    ||   
uuaagucuucguacccuauuagccuuguuc    gg  g
                              auaa  au 


mirna_id: tgu-mir-2974
hairpin:
        -g   -  G  A  G                      a  -  u  -       a   cg 
ggggcggg  gcg GC GG UG GCUGGGCCGGGcugggcugggc cg gc cg gcucggc cgg  g
||||||||  ||| || || || |||||||||||||||||||||| || || || ||||||| |||   
ccucgcuc  cgc cg uc gc cggcucggcucggcucggcucg gc cg gc cggguug gcu  g
        ga   a  g  g  a                      -  u  -  a       -   ug 


mirna_id: tgu-mir-2975
hairpin:
      - uua          U           a  gggaa 
ggagca c   AAAGGAAAGG GUGGAUCCAUc ga     g
|||||| |   |||||||||| ||||||||||| ||      
cuucgu g   uuuccuuucc uaccuagguag cu     c
      c uac          -           -  aaggg 


mirna_id: tgu-mir-2976-1
hairpin:
        -     -     g    g    g    g    g  g     ug   c g a   g   a 
cgugccgu gccgu gccgu ccgu ccgu ccgu ccgu cc ugccg  ccg g g gcc ccc g
|||||||| ||||| ||||| |||| |||| |||| |||| || |||||  ||| | | ||| ||| c
guacggcg uggcg uggcG GGCG GGCG GGCG GGCG gg gcggc  ggc c c cgg ggg g
        g     g     G    A    A    A    a  -     gu   - g -   -   c 


mirna_id: tgu-mir-2976-3
hairpin:
  c   g  -gc   a     -cc    c c -gg     -          -----A    -A     G      uc 
gc gga cg   ggg gcggc   cggg c g   cggag gugggaGCGG      GCGG  GCGGA CGGGGa  c
|| ||| ||   ||| |||||   |||| | |   ||||| ||||||||||      ||||  ||||| ||||||   
cg ccu gu   ccc cgccg   gccc g c   gucuc uacccucguc      cgcc  cgucu gcuccu  a
  u   g  auc   c     acc    c a aua     g          augucg    gg     g      cu 


mirna_id: tgu-mir-2976-2
hairpin:
   -   -aca  a  a    ga u g      a   ga   a  ga gg    -     
ccg cuc    ug cc ccgu  c c cugcuc cgu  ccg gc  c  gccg ggcc 
||| |||    || || ||||  | | |||||| |||  ||| ||  |  |||| ||| g
ggc ggg    gc GG GGCG  G G GGCGAG GCG  ggc cg  g  cggc ccgg 
   a   ccgg  c  -    AG C A      -   -a   -  ag --    g     


mirna_id: tgu-mir-2977
hairpin:
caagcug      au    -      gu   c   aa    -g   c 
       gcuaca  gugu ggguuu  ggg uca  gcuu  ucg u
       ||||||  |||| ||||||  ||| |||  ||||  |||  
       uggugu  cACG UCCGAG  CCC AGU  CGag  agc u
---guua      --    G      AU   A   --    ga   u 


mirna_id: tgu-mir-2978
hairpin:
 g   G     -    GAA      -    GU 
g ucu UGGGC UGGG   GGGCUG CUGG  g
| ||| ||||| ||||   |||||| ||||   
c aga gcccg gccc   uccgac gacc  g
 g   -     u    -ac      c    au 


mirna_id: tgu-mir-2979-1
hairpin:
     uu   u   -C       UUU           a  ga a 
cagga  agc ggU  CAGAACC   CAAGGGACUGA gu  g c
|||||  ||| |||  |||||||   ||||||||||| ||  | u
guccu  ucg ucg  gucuugg   guuccuugacu cg  c g
     uu   u   uc       ---           c  ac a 


mirna_id: tgu-mir-2980-1
hairpin:
               uc           g        ca 
aguuuuucagcuuga  cugcuccagug uaagguuu  c
|||||||||||||||  ||||||||||| ||||||||   
ucaaaaagucgaACU  GACGAGGUCAC AUUccaaa  u
               GA           G        aa 


mirna_id: tgu-mir-2981
hairpin:
     cg  a      -     gcguca    c    c -     ---c   g 
gccgc  cc ccgccc cccgg      cccg gccg g cccgc    ccc c
|||||  || |||||| |||||      |||| |||| | |||||    |||  
cggcg  gG GGCGGG GGGCC      GGGC Cggc c gggcg    ggg c
     -a  -      C     ------    -    - a     ccac   c 


mirna_id: tgu-mir-2982
hairpin:
   ---g            G A      GCUU     --  c   a    ccca   cc 
ccu    guagguggcUGU G GGGAGG    GGGAu  gc ggg ccau    gga  c
|||    |||||||||||| | ||||||    |||||  || ||| ||||    |||   
gga    cauccaccgacg c cccuuu    cccug  cg ccc ggua    ccu  c
   agug            g a      --ac     uu  u   -    ----   ug 


mirna_id: tgu-mir-2983
hairpin:
                             ca  a g 
ccggacuggcuccaucaagccuguuggaa  gc g a
|||||||||||||||||||||||||||||  || |  
ggucugaccGAGGUAGUUCGGACGACCUU  cg c a
                             Uc  g c 


mirna_id: tgu-mir-2984
hairpin:
u            - A        A           auaaa  aca  a 
 gcuucaccugcg g GCCUGCUG GAGUGAAAUUG     gg   gc c
 |||||||||||| | |||||||| |||||||||||     ||   ||  
 cgaaguggacgu c cgggcgac cucacuuuaac     cc   cg c
a            u a        a           --gga  ---  a 


mirna_id: tgu-mir-2985-1
hairpin:
      cuu     a         A   G           g 
aaggau   cauua gGUGGGUGG AUA UAUAACAAUau c
||||||   ||||| ||||||||| ||| ||||||||||| u
uuucua   guagu ccauccacc uau auauuguugua a
      --u     c         c   g           a 


mirna_id: tgu-mir-2985-2
hairpin:
    uucuc     a  U          G           a 
aggg     cauua gG GGGUGGAAUA UAUAACAAUau a
||||     ||||| || |||||||||| ||||||||||| a
uccc     guagu cc uccaccuuau auauuguugug a
    ----u     c  u          g           u 


mirna_id: tgu-mir-2986
hairpin:
u  a   -           uc              a aacu  ug -    c    gg    --ca  ug     
 uc ucu gaggaucuuca  uggggaucuucugg g    uc  g agaa uucu  agaa    uc  gaga 
 || ||| |||||||||||  |||||||||||||| |    ||  | |||| ||||  ||||    ||  ||| a
 ag agg cuucuaggggu  ACUUCUAGAGGACC C    AG  c ucuu aaga  ucuu    ag  cuuc 
a  -   u           cU              A ----  GU g    c    aa    caag  gu     


mirna_id: tgu-mir-2987
hairpin:
      - gaa         ag      cc   aaug    u 
uuaggc c   agagcagcc  agccuu  cuc    ucug u
|||||| |   |||||||||  ||||||  |||    |||| u
aguccg g   UCUUGUCGG  UCGGAA  GAG    Agac u
      a -ac         AG      -C   ----    a 


mirna_id: tgu-mir-2988
hairpin:
        ------      G  AGG     agag     aaug   a       agg 
cCCUCUUC      UCUGGA CC   CUGGg    cuggg    uuc ccuggag   a
||||||||      |||||| ||   |||||    |||||    ||| |||||||   a
gggagagg      ggaccu gg   gaucc    gacuc    gag ggaccuc   a
        ucgaga      a  gga     --ga     --ga   -       gua 


mirna_id: tgu-mir-129
hairpin:
          -       C   CU      G   uacauaa 
cuucgcgaau CUUUUUG GGU  GGGCUU Cug       c
|||||||||| ||||||| |||  |||||| |||        
gaggcgcuUA GAAAAAC CCA  CCCGAA ggc       u
          C       C   UU      g   ccaucca 


mirna_id: tgu-mir-139
hairpin:
   -    c   -      -   U  A            guga 
ggc cugg ugu auUCUA CAG GC UGUGUCUCCAGU    g
||| |||| ||| |||||| ||| || ||||||||||||    u
ccg gacc aca UAAGGU GUC CG GCGUAGAGGUca    a
   u    u   a      U   C  -            guga 


mirna_id: tgu-mir-363
hairpin:
       u   gu         ca  a         ga  aguu 
guuuugc guu  cggguggau  cg ugcaauuuu  uu    u
||||||| |||  |||||||||  || |||||||||  ||     
cagaacg caa  GUCUACCUA  GC ACGUUAAaa  ag    a
       c   aU         UG  -         ag  gaug 


mirna_id: tgu-mir-9-2
hairpin:
cgaguug   UC               G      ug u 
       uua  UUUGGUUAUCUAGCU UAUGAg  u u
       |||  ||||||||||||||| ||||||  |  
       aaU  AAGCCAAUAGAUCGA AUAcuu  g u
-----aa   GA               A      cu g 


mirna_id: tgu-mir-9-1
hairpin:
gauguuu   UC               G     gu   g 
       cug  UUUGGUUAUCUAGCU UAUGA  guu u
       |||  ||||||||||||||| |||||  |||  
       gaU  AAGCCAAUAGAUCGA AUAcu  cga g
-------   GA               A     ac   g 


mirna_id: tgu-mir-148
hairpin:
ccccggcgccgguaccggcggaggacugga   u     ag            --a    cc    -   gg 
                              gcc ccgga  caaaguucugug   cacu  gacu cug  u
                              ||| |||||  ||||||||||||   ||||  |||| |||  a
                              cgg ggccu  GUUUCAAGACAU   GUGA  CUga gau  c
------------------------------   c     cU            CAC    --    c   ag 


mirna_id: tgu-let-7i
hairpin:
gggcc     U                 U   --------  u     ugu 
     cuggc GAGGUAGUAGUUUGUGC GUU        gg cgggu   g
     ||||| ||||||||||||||||| |||        || |||||   a
     gaucg uuccgucaucgaacgcg caa        uc gcccg   c
---gu     -                 u   uagaggug  -     uua 


mirna_id: tgu-mir-125-1
hairpin:
cuuuuccua     U    C   A        ----g   u 
         gUCCC GAGA CCU ACUUGUGA     guu u
         ||||| |||| ||| ||||||||     |||  
         CAGGG UUCU GGA UGAACAcu     cga u
-------UC     -    C   C        aacaa   u 


mirna_id: tgu-mir-125-2
hairpin:
ccccucucaa    U    C           Au        
          UCCC GAGA CCUAACUUGUG  guuuagc 
          |||| |||| |||||||||||  |||||| u
          AGGG UUCU GGAUUGGGCAc  uaaauuu 
-------uCG    -    C           -c        


mirna_id: tgu-mir-30b
hairpin:
agugagcga            UC           g gaagc 
         cUGUAAACAUCC  GACUGGAAGCu u     a
         ||||||||||||  ||||||||||| |      
         GACGUUUGUAGG  CUGACUUUCgg g     g
---------            --           g uagac 


mirna_id: tgu-mir-124-1
hairpin:
agagagagagagcgagacagagcacucuaaggc    a    cC        A   GA        uaau 
                                 ucug cucu  GUGUUCAC GCG  CCUUGAuu    g
                                 |||| ||||  |||||||| |||  ||||||||    u
                                 aggc gaga  CGUAAGUG CGC  GGAAUuaa    c
-------------------------------cu    -    AC        G   AC        caua 


mirna_id: tgu-mir-124-2
hairpin:
----------cC        A   GA        uaaau 
            GUGUUCAC GCG  CCUUGAuu     g
            |||||||| |||  ||||||||     u
            CGUAAGUG CGC  GGAAUuaa     c
cggagcaagaAC        G   AC        cauac 


mirna_id: tgu-mir-124-3
hairpin:
ucccgcaagccccgcucgccgccugcccugcuccgagcggggacagcccga  c       - C        A   GA        uaaug 
                                                   gc ccucucu g GUGUUCAC GCG  CCUUGAuu     u
                                                   || ||||||| | |||||||| |||  ||||||||      
                                                   cg ggagaga C CGUAAGUG CGC  GGAAUuaa     c
---------------------------------------------------  a       A -        G   AC        cauac 


mirna_id: tgu-mir-101-1
hairpin:
-------                    cg     guaua 
       uuuuucgguuaucaugguac  gugcu     c
       ||||||||||||||||||||  |||||      
       aagAAGUCAAUAGUGUCAUG  CAUGg     g
ugguggu                    -A     aaagu 


mirna_id: tgu-mir-101-2
hairpin:
-------uggc                  A    --gu u 
           UCAGUUAUCACAGUGCUG UGCu    c c
           |||||||||||||||||| ||||    |  
           AGUCAAUAGUGUCAUGAC AUGg    g u
cgacgguaggA                  -    aaau u 


mirna_id: tgu-let-7b
hairpin:
ucuaa    aU                     ucaggguagugauuu 
     cagg  GAGGUAGUAGGUUGUGUGGUU               u
     ||||  |||||||||||||||||||||                
     gucc  uuccgucauccaacauaucaa               g
---ua    -c                     uagaggacuaacccc 


mirna_id: tgu-mir-7-1
hairpin:
uaguucugu    A     A       U      uu  gau 
         gUGG AGACU GUGAUUU GUUGUu  uu   a
         |||| ||||| ||||||| ||||||  ||    
         UACC UCUGA CACUAAA CAACag  aa   a
---------    G     -       -      uu  auc 


mirna_id: tgu-mir-7-2
hairpin:
ugcuucccugU  -A     A       U     u  au  cu 
           GG  AGACU GUGAUUU GUUGU gu  gg  c
           ||  ||||| ||||||| ||||| ||  ||   
           cc  ucuga cacugaa caaca ca  cc  a
----------u  cg     -       -     c  --  cu 


mirna_id: tgu-mir-7-4
hairpin:
--------------u  cu        A  A   G      U     ug g  u 
               gg  cugugUGG AG CUA UGAUUU GUUGU  u uu g
               ||  |||||||| || ||| |||||| |||||  | ||  
               cc  gacauacc uc gau acuaaa caaca  g aa u
cccgacaccgucgga  -c        g  c   -      -     gu g  a 


mirna_id: tgu-mir-100-1
hairpin:
-----------------------------------u   -      A   CG     C   A      cuca 
                                    gcu gccaca ACC  UAGAU CGA CUUGUg    u
                                    ||| |||||| |||  ||||| ||| ||||||    a
                                    cgg cgguGU UGG  AUCUA GUU GAACAc    u
ccccuucacgucgucguggggccccacgagaacggu   u      C   AU     U   C      accu 


mirna_id: tgu-mir-221
hairpin:
-------------   ug   u         auuu    -   u 
             acc  gca acaauguag    cugu guu g
             |||  ||| |||||||||    |||| ||| u
             UGG  CGU UGUUACAUC    GAca cga u
guccgucgacCUU   GU   C         ----    a   a 


mirna_id: tgu-mir-128-2
hairpin:
----     c  cg   CCCGU     U             uua      aa    g gag 
    guggc gu  GAC     GCGGC GGAAGgggggccg   cacugu  gaga u   u
    ||||| ||  |||     ||||| |||||||||||||   ||||||  |||| |    
    caccg ca  cug     ugucg ccuUUUCUCUGGC   GUGACA  CUcu g   a
gccu     -  --   -----     u             CAA      --    g acg 


mirna_id: tgu-mir-128-1
hairpin:
-------   uuc       uaa      cu       u 
       gga   ggggccg   cacugu  gagaggu u
       |||   |||||||   ||||||  |||||||  
       cuu   CUCUGGC   GUGACA  CUcuuua a
ucgucga   UUU       CAA      --       c 


mirna_id: tgu-mir-222-1
hairpin:
-----------uc             -     auu   ucuu 
             gcucaguagucag uguag   cug    u
             ||||||||||||| |||||   |||     
             UGGGUCAUCGGUC ACAUC   gac    a
cuacaguaguCUC             U     GAc   uaac 


mirna_id: tgu-mir-138-1
hairpin:
gcugugcaacAG             UCA      - a  a 
            CUGGUGUUGUGAA   GGCCGu c cc g
            |||||||||||||   |||||| | ||  
            gaccacaacacuu   ucggca g gg u
-------gcugg             -ca      a a  c 


mirna_id: tgu-mir-138-2
hairpin:
-------u  u   u  AG       U     UCA     acgacaagcg 
        ug ugc gc  CUGGUGU GUGAA   GGCCG          c
        || ||| ||  ||||||| |||||   |||||           
        ac acg ug  gaccaca cacuu   ucggc          u
cucaccau  u   u  -g       u     -ua     cuaacauccu 


mirna_id: tgu-mir-26-1
hairpin:
uguggccu   U         C         -U  aucc 
        ggU CAAGUAAUC AGGAUAGGC  gu    a
        ||| ||||||||| |||||||||  ||     
        uca guucauugg ucuuauccg  ca    u
-------g   c         u         cu  aucu 


mirna_id: tgu-mir-19b-1
hairpin:
----------           -  -      uc    --u     
          uuaguuuugca gg uuugca  cagc   guau 
          ||||||||||| || ||||||  ||||   ||| g
          AGUCAAAACGU CC AAACGU  GUcg   caua 
ugacgguguc           A  U      --    ucu     


mirna_id: tgu-mir-19b-2
hairpin:
---------            -  -      ucc    uuac 
         gucaguuuugca gg uuugca   cagc    u
         |||||||||||| || ||||||   ||||    a
         cAGUCAAAACGU CC AAACGU   GUcg    a
ugguggugu            A  U      ---    uuaa 


mirna_id: tgu-let-7e
hairpin:
----     g   cU   GU         A      -  --    ucu  u 
    uccuu agg  GAG  AGUAGAUUG AUAGUU gu  ggag   gg c
    ||||| |||  |||  ||||||||| |||||| ||  ||||   ||  
    aggaa ucc  uuc  ucaucuaac uaucaa cg  ucuc   cc c
acag     -   -u   ug         a      u  ag    ---  u 


mirna_id: tgu-let-7a-1
hairpin:
--  -   ug   U   GU                ---------u        
  uc cuu  ggg GAG  AGUAGGUUGUAUAGUU          uagggcu 
  || |||  ||| |||  ||||||||||||||||          |||||| a
  gg gaa  ccu uuc  ucaucuaacauaucaa          gucccgu 
uc  u   gu   -   ug                uagacugucc        


mirna_id: tgu-let-7a-3
hairpin:
--     gucuu     aa     aauc     c  g   uga  a  c 
  gacuu     gacug  gcagc    cugcc ca cuc   ag ug c
  |||||     |||||  |||||    ||||| || |||   || ||  
  cuggg     UUGAU  UGUUG    GAUGG GU ggg   uc ac u
ua     --auu     -A     -GAU     A  a   -ug  -  g 


mirna_id: tgu-let-7a-2
hairpin:
----   ---      uU   G   U             uagaa ua a 
    gca   uccagg  GAG UAG AGGUUGUAUAGUU     u  c c
    |||   ||||||  ||| ||| |||||||||||||     |  | c
    cgu   ggguuc  UUC AUC UCCAACAUGUCaa     a  g a
caca   ucu      CU   G   C             --uag gg a 


mirna_id: tgu-let-7a-4
hairpin:
ucugug    U          GU         ---ugg  gg -       
      gagg GAGGUAGUAG  UGUAUAGUU      ug  a gggauu 
      |||| ||||||||||  |||||||||      ||  | ||||| u
      uucc uuccguuauc  acauaucaa      ac  u cccuag 
----aa    -          ug         uagugg  uu a       


mirna_id: tgu-let-7c-1
hairpin:
--------  a      uU   G   U             ua  g ua a 
        gc uccggg  GAG UAG AGGUUGUAUGGUU  ga u  c c
        || ||||||  ||| ||| |||||||||||||  || |  | c
        cg agguuc  uuc auc uccaacaugucaa  uu a  g c
aguucaca  -      cu   g   u             --  g gg u 


mirna_id: tgu-mir-30c
hairpin:
------------U       U   ACA         ----gu g 
             GUAAACA CCU   CUCUCAGCU      g a
             ||||||| |||   |||||||||      |  
             CAUUUGU GGA   GAGGGUCga      c a
guuccgucucUCU       C   --A         aagaau a 


mirna_id: tgu-mir-218-1
hairpin:
-----------------------------a   u      U         CU        gguugugag 
                              gau uucugU GUGCUUGAU  AACCAUGU         g
                              ||| |||||| |||||||||  ||||||||          
                              cug aaggua cacgaacug  uugguaca         u
ucgucgaacgguacgacaucuuucgacgca   c      c         uc        aaaugagua 


mirna_id: tgu-mir-218-2
hairpin:
-------------------------------------------------ggguu    uUU         CU        ------g   ga 
                                                      uucc   GUGCUUGAU  AACCAUGU       gua  a
                                                      ||||   |||||||||  ||||||||       |||   
                                                      aagg   cacgaacug  uugguaca       cau  c
gaagacggggucgucuucauagguccguacgguacgacgucccucauacgucgg    uac         uc        agguaaa   aa 


mirna_id: tgu-mir-103-1
hairpin:
gggcugaagaugaaaggcacaucugucaugucuuac       --    u  u           c   u g a 
                                    ugccuuc  ggcu cu uacagugcugc uug u c u
                                    |||||||  |||| || ||||||||||| ||| | |  
                                    acggaAG  UCGG GA AUGUUACGACG Aac a g a
-------------------------------gaguu       UA    -  C           -   u g u 


mirna_id: tgu-mir-103-2
hairpin:
-----------uuc    u  u           c   uu   u 
              agcu cu uacagugcugc uug  gca u
              |||| || ||||||||||| |||  |||  
              UCGG GA AUGUUACGACG Aac  ugu c
gagacgagaaAGUA    -  C           -   --   a 


mirna_id: tgu-mir-99-1
hairpin:
aauugg    A         UC   U       ugaa 
      caua ACCCGUAGA  CGA CUUGUgu    a
      |||| |||||||||  ||| |||||||    c
      gugU UGGGUAUCU  GCU GAACacg    g
------    C         UC   C       ucac 


mirna_id: tgu-mir-2989-1
hairpin:
-----ca          A  U    AGAACUC        -ggga     g 
       uaugcucaGC CG GAUG       UGUuggua     caucu a
       |||||||||| || ||||       ||||||||     |||||  
       gugcgggucg gu cuau       gcaaccgu     guggg g
ucauaag          a  -    -------        aagua     a 


mirna_id: tgu-mir-2989-2
hairpin:
-----ca          A  U    AGAACUC        -ggga     g 
       uaugcucaGC CG GAUG       UGUuggua     caucu a
       |||||||||| || ||||       ||||||||     |||||  
       gugcgggucg gu cuau       gcaaccgu     guggg g
ucguaag          a  -    -------        aagua     a 


mirna_id: tgu-mir-1559
hairpin:
----ca  aa     -cc  g   -   ca    a  ----     -  u   ca aa         ----  u 
      cc  gggag   ca gca gca  gaga gg    uggau uc gca  c  acacucggc    gc g
      ||  |||||   || ||| |||  |||| ||    ||||| || |||  |  |||||||||    ||  
      gg  cCCUC   GU UGU CGU  CUUu cc    aucug ag cgu  g  ugugagccg    cg u
ccguaa  -a     AUC  A   U   AG    -  ucag     g  u   ag -g         gugc  a 


mirna_id: tgu-mir-21
hairpin:
uccugu             A     A     A    ugg 
      cggaUAGCUUAUC GACUG UGUUG cugu   a
      ||||||||||||| ||||| ||||| ||||    
      gUCUGUCGGAUGG CUGAC ACAAc ggua   u
------             -     A     -    cuc 


mirna_id: tgu-let-7g-1
hairpin:
gauu      U        A            ugagg    -a  a    a 
    ccaggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
    |||||| |||||||| ||||||||||||     ||||  || ||||  
    gguccg uuccguca cggacaugucaa     uaga  ac augg c
----      -        c            -----    gg  -    c 


mirna_id: tgu-mir-122
hairpin:
ccca       GG       C           uguc 
    gagcugU  AGUGUGA AAUGGUGUUUG    c
    |||||||  ||||||| |||||||||||    a
    cuugaua  ucacacu uuaccgcaaac    u
---c       aa       a           uauc 


mirna_id: tgu-let-7f
hairpin:
ucug    a UG                      ---------       u 
    ucag g  AGGUAGUAGAUUGUAUAGUUgu         aggguag u
    |||| |  ||||||||||||||||||||||         ||||||| a
    aguc c  uccguuaucuaacauaucaaua         ucccauu u
---g    - cu                      gaggacuug       u 


mirna_id: tgu-mir-383
hairpin:
ccugcuccucA      AA    A        --    gu 
           GAUCAG  GGUG UUGUGGCU  uuga  a
           ||||||  |||| ||||||||  ||||  a
           cugguc  ucac gacaccga  aauu  a
--------aga      cg    -        cg    au 


mirna_id: tgu-mir-29a-1
hairpin:
---------           uuu       c    ucaa 
         ugacugauuuc   ugguguu agag    u
         |||||||||||   ||||||| ||||    a
         aUUGGCUAAAG   ACCACGA Ucuu    a
guuagugau           UUU       -    uaau 


mirna_id: tgu-mir-29a-2
hairpin:
---------           ucu       ---     uc 
         ugaccgauuuc   ugguguu   cagag  u
         |||||||||||   |||||||   |||||  c
         aUUGGCUAAAG   ACCACGA   guuuu  a
ggauguagu           UUU       Ucu     ug 


mirna_id: tgu-mir-451
hairpin:
--------------gccggcgg    A              GA 
                      ggAA CCGUUACCAUUACU  G
                      |||| ||||||||||||||   
                      ucuu ggcaaugguaauga  U
acggcggaacggccggcagccg    -              UU 


mirna_id: tgu-mir-27
hairpin:
aucu    gg g                  auug        u  uug 
    cucu  c aggugcagagcuuagcug    gugaacag ga   u
    ||||  | ||||||||||||||||||    |||||||| ||   u
    gaga  g uccaCGUCUUGAAUCGGU    CACUUguu cu   u
----    -a -                  --GA        u  ccu 


mirna_id: tgu-mir-30a
hairpin:
uuggg      ag   cu            UU           ggaagg 
     gcaguc  ugc  cUGUAAACAUCC  GACUGGAAGCU      g
     ||||||  |||  ||||||||||||  |||||||||||      c
     cgucgg  acg  GACAUUUGUAGG  CUGACUUUCga      u
-----      --   aC            --           ggaagg 


mirna_id: tgu-let-7d
hairpin:
  u       A              C      -------  a      g 
gc ccuagga GAGGUAGUAGGUUG AUAGUU       uu gggcag g
|| ||||||| |||||||||||||| ||||||       || |||||| a
cg ggauucu uuccgucguccaac uaucaa       ag cucguu u
  -       -              a      uggagga  a      u 


mirna_id: tgu-mir-34b
hairpin:
aaaauuug   ug aa    --    cau a        
        ggg  a  ggcu  cugc   c gccuggu 
        |||  |  ||||  ||||   | |||||| u
        ccC  U  UCGA  GAUG   G CGGAccg 
caacgaaa   GU AG    UU    --U A        


mirna_id: tgu-mir-33
hairpin:
ggcagcuguaG          UU         -  ug g 
           UGCAUUGUAG  GCAUUGCau gu  u g
           ||||||||||  ||||||||| ||  |  
           acgugacguc  uguaacgug ca  g c
---------ug          uu         u  gu a 


mirna_id: tgu-mir-24
hairpin:
ccagucggaaacaacuuacagcugcugcuguuguuccaggcuguugau  a c  uc    g  g   a         ua     uc  au 
                                                gg c cg  cucc gu ccu cugagcuga  ucagu  ug  u
                                                || | ||  |||| || ||| |||||||||  |||||  ||   
                                                cc g gc  gagG CA GGA GACUUGACU  GGUca  ac  u
------------------------------------------------  - a  -u    A  A   C         -C     -c  au 


mirna_id: tgu-mir-551
hairpin:
------------         GG     AAGA   ggu   c 
            GAAAUCAAG  UGGGU    Ccu   gag a
            |||||||||  |||||    |||   |||  
            CUUUGGUUC  ACCCA    Gga   cuc a
gggugucgggGA         AU     --GC   -au   a 


mirna_id: tgu-mir-338
hairpin:
--------       CU   -         UCA    aagu 
        agcAACA  AUC CUGAUGCUG   gagu    g
        |||||||  ||| |||||||||   ||||     
        uuGUUGU  UAG GACUACGAC   CUcg    g
aaugguga       UU   U         ---    aaau 


mirna_id: tgu-mir-137
hairpin:
--------  ug   g           ug a     -  g 
        gg  acg guauucuuggg  g uaaua cg a
        ||  ||| |||||||||||  | ||||| || u
        cu  UGC CAUAAGAAUUC  U AUUgu gc u
gagaggag  GA   G           GU -     u  a 


mirna_id: tgu-mir-126
hairpin:
auccucguuccugcagggcgggucuggagccacgaggagcggcgggcgccgcu   g     c           U       C cug   c 
                                                     ggu acggc CAUUAUUACUU UGGUACG g   uga a
                                                     ||| ||||| ||||||||||| ||||||| |   |||  
                                                     ccg ugucG GUAAUAAUGAG GCCAUGC c   acu c
---------------------------------------------------ga   g     C           U       U -aa   u 


mirna_id: tgu-mir-200a
hairpin:
ggacuugcugguccu  g        -             C    uuugcu 
               cu ugggCAUC UUACUAGACAGUG UGGa      g
               || |||||||| ||||||||||||| ||||       
               ga auUUGUAG AAUGGUCUGUCAC AUcu      c
----------agugg  a        C             A    caucuc 


mirna_id: tgu-mir-181a-1
hairpin:
ugcuucagugA   U      CU       A    gga  u 
           ACA UCAACG  GUCGGUG GUuu   au a
           ||| ||||||  ||||||| ||||   ||  
           UGU AGUUGC  CAGCUAC CAaa   ug a
-------cCCA   U      --       -    -ag  a 


mirna_id: tgu-mir-181a-2
hairpin:
agcuucagugA   U      CU       A    gagaa 
           ACA UCAACG  GUCGGUG GUuu     c
           ||| ||||||  ||||||| ||||      
           ugu aguugc  cagcuac caaa     u
------uucca   c      --       -    aaaga 


mirna_id: tgu-mir-2991
hairpin:
-----uaga  ug  ca     uc    c  ag  c 
         gg  ac  gcugc  ugca ca  gc c
         ||  ||  |||||  |||| ||  ||  
         uC  UG  UGAUG  AUGU gu  cg u
cuacaaaug  GU  UC     CU    A  ga  u 


mirna_id: tgu-mir-490-1
hairpin:
ucaugaguucaugc       c      --         g   caagaua 
              uucgaca caugga  ucuccaggu ggu       a
              ||||||| ||||||  ||||||||| |||       u
              gagcUGU GUACCU  GGAGGUCCA Cca       a
--------cuuguc       C      CA         A   cauagag 


mirna_id: tgu-mir-490-2
hairpin:
ucaugaguucaugc       c      --         g   caag   a 
              uucgaca caugga  ucuccaggu ggu    auu u
              ||||||| ||||||  ||||||||| |||    ||| a
              gagcUGU GUACCU  GGAGGUCCA Cca    uag g
--------cuuguc       C      CA         A   --ca   a 


mirna_id: tgu-mir-2992
hairpin:
ggcggcagggC                 -U     u g g 
           CCCGGCAGGACAAAGUC  CUcug g a g
           |||||||||||||||||  ||||| | |  
           gggccguccuguuucgg  gagac c u g
----------c                 cc     u g c 


mirna_id: tgu-mir-2993
hairpin:
guagcugga     CU       A   -    cauu 
         uCCGG  GUGGAGA GGA Ggug    c
         |||||  ||||||| ||| ||||     
         gggcu  uaccucu ccu ccgc    a
----caaga     cc       -   a    cccc 


mirna_id: tgu-mir-2994
hairpin:
gggugu    C  C         -   G      --  aa 
      ggag GU GGGCUGAUC CCC CUGCGg  gc  a
      |||| || ||||||||| ||| ||||||  ||   
      ccuc ca cccgacugg ggg ggcgcc  cg  g
------    a  c         a   -      ac  cc 


mirna_id: tgu-mir-153-1
hairpin:
----------u              gu       -a  aa 
           gucauuuuugugau  ugcagcu  gu  u
           ||||||||||||||  |||||||  ||  a
           UAGUGAAAACACUG  ACGUUga  cg  u
ucaaagguuaC              AU       cc  ag 


mirna_id: tgu-mir-153-2
hairpin:
--------   -              -       --   aa 
        gcg ucauuuuugugauu ugcagcu  agu  u
        ||| |||||||||||||| |||||||  |||   
        ugC AGUGAAAACACUGA ACGUUga  ucg  c
ccgacggu   U              U       cc   gu 


mirna_id: tgu-mir-20a
hairpin:
cuug   c   -A                 ----G    g 
    uag acU  AAGUGCUUAUAGUGCAG     UAGu u
    ||| |||  |||||||||||||||||     ||||  
    guc uga  uucacgaauauuacguc     auca u
----   a   aa                 aucua    c 


mirna_id: tgu-mir-142
hairpin:
ugcagucaC           A         u aa a    
         CCAUAAAGUAG AAGCACUac a  c gca 
         ||||||||||| ||||||||| |  | || c
         gguauuucauc uuugugaug u  g cgu 
-------ua           c         - gg a    


mirna_id: tgu-mir-15a
hairpin:
uggcauaac UA        UA         gggu   g 
         g  GCAGCACA  AUGGUUUGU    uuu a
         |  ||||||||  |||||||||    |||  
         c  cgucgugu  uaccggacg    gga a
------aaa uc        ua         ---u   a 


mirna_id: tgu-mir-107
hairpin:
-----------uuc    u  u           c   u   a 
              agcu cu uacaguguugc uug ggc u
              |||| || ||||||||||| ||| ||| g
              UCGG GA AUGUUACGACG Aac uug g
gagguacgaaACUA    -  C           -   -   a 


mirna_id: tgu-mir-140
hairpin:
cgu    ugcCA             A       uu   uc 
   gucc     GUGGUUUUACCCU UGGUAGg  acg  a
   ||||     ||||||||||||| |||||||  |||   
   CAGG     CACCAAGAUGGGA ACCAUcu  ugu  u
---    -----             C       --   cg 


mirna_id: tgu-mir-194-1
hairpin:
ug  c   uaU         A      G    cuac 
  cu uca   GUAACAGCA CUCCAU UGGA    a
  || |||   ||||||||| |||||| ||||    c
  gg agu   cauugucgu gaggug accu    u
--  u   uuu         a      -    ucag 


mirna_id: tgu-mir-135a-1
hairpin:
ucuag               U            u g a 
     uguuuUAUGGCUUUU AUUCCUAUGUGA a u a
     ||||||||||||||| |||||||||||| | | u
     auaaAGUACCGAAGG UAGGGAUGUacu u a a
-----               -            c g a 


mirna_id: tgu-mir-135b
hairpin:
ugccguc            UU            uuauac 
       uugUAUGGCUUU  AUUCCUAUGUGA      a
       ||||||||||||  ||||||||||||       
       gacgugccgaag  uagggauauacu      u
------u            -u            ucaccc 


mirna_id: tgu-mir-184
hairpin:
cccgcggcuccccgccggucuccugaggcc    u  ug         c      a c     -u  ugc 
                              gcuc cg  cccuuauca uuuucc g ccagc  uc   a
                              |||| ||  ||||||||| |||||| | |||||  ||    
                              ugag gc  GGGAAUAGU AAGAGG C GGUug  ag   c
----------------------------ag    c  gU         C      - A     uc  ucu 


mirna_id: tgu-mir-1-2
hairpin:
-----------c                ac     ugaaca 
            acauacuucuuuaugu  ccaua      u
            ||||||||||||||||  |||||       
            UGUAUGAAGAAAUGUA  GGUau      a
ggacgguuuuUA                -A     cguaac 


mirna_id: tgu-mir-1-1
hairpin:
-----------g                gc     ugaacc 
            acauacuucuuuauau  ccaua      u
            ||||||||||||||||  |||||       
            UGUAUGAAGAAAUGUA  GGUau      g
ggguggacuuUA                -A     cgaacg 


mirna_id: tgu-mir-181b-1
hairpin:
ggucacaaugAA         CUG           aa  a 
            CAUUCAUUG   UCGGUGGGUUu  cu u
            |||||||||   |||||||||||  ||  
            guaaguaac   agucacucgaa  gg g
------gucaac         --a           ca  u 


mirna_id: tgu-mir-181b-2
hairpin:
ggcu   aucAA         CU           uucau 
    gca     CAUUCAUUG  GUCGGUGGGUU     u
    |||     |||||||||  |||||||||||      
    cgu     guaaguaac  cagucacucaa     u
----   caaac         --           cuauc 


mirna_id: tgu-mir-17a
hairpin:
---------  -CA        A  G     GUA  gaua 
         gu   AAGUGCUU CA UGCAG   Gu    u
         ||   |||||||| || |||||   ||     
         cG   UUCACGGA GU ACGUC   ca    a
guuguauua  AUG        A  G     Auc  agau 


mirna_id: tgu-mir-202-1
hairpin:
------cu           -a           g    u 
        uuuuccuaugc  uauacuucuuu agaa u
        |||||||||||  ||||||||||| ||||  
        aaAAGGGUACG  AUAUGGAGAaa ucuu g
aacggggu           GG           -    c 


mirna_id: tgu-mir-23
hairpin:
-------uu   --          -  A      gugacu 
         UGG  GUUCCUGGCA UG UGAUUu      u
         |||  |||||||||| || ||||||       
         aCC  UAGGGACCGU AC ACUAaa      a
uaccgacgc   AU          U  -      auuaga 


mirna_id: tgu-mir-187
hairpin:
------   c    a                a c  u 
      cuc ggcu caacacaggacauggg g uu u
      ||| |||| |||||||||||||||| | ||  
      gag CCGA GUUGUGUUCUGUGCUc c ag c
cacggg   a    C                c a  u 


mirna_id: tgu-mir-219
hairpin:
ucuccgcuccUGAU      A            -ug  -   g 
              UGUCCA ACGCAAUUCUUg   cg aug a
              |||||| ||||||||||||   || |||  
              acaggu uguguuaagaac   gc ugc g
--------------      c            caa  a   c 


mirna_id: tgu-mir-2995
hairpin:
uugccuuugu        -UUC U         a   ca 
          UGGCACUG    G AACCUGUUa cag  c
          ||||||||    | ||||||||| |||  c
          aucgugac    c uuggguaau guc  u
---------c        cuua c         c   cu 


mirna_id: tgu-mir-204-1
hairpin:
acccgu    U          AU    U    gagaau 
      ggac UCCCUUUGUC  CCUA GCCU      a
      |||| ||||||||||  |||| ||||      u
      cuug agggaaacgg  gggu cggg      a
------    c          ag    -    ggaagu 


mirna_id: tgu-mir-204-2
hairpin:
accug     U         CA    A     g aga 
     ugggc UCCCUUUGU  UCCU UGCCU g   u
     ||||| |||||||||  |||| ||||| |   c
     acucg agggaaacg  aggg acgga u   a
----g     u         ac    -     g gac 


mirna_id: tgu-mir-204-3
hairpin:
----------------cccu   a         U   A     U    --ga    
                    gug gcUUCCCUU GUC UCCUA GCCU    gcg 
                    ||| ||||||||| ||| ||||| ||||    || a
                    cac cggagggaa cgg agggu cgga    cgu 
ccccgacacccaccgucggg   c         c   c     -    gguc    


mirna_id: tgu-mir-133-1
hairpin:
-------uaa       aa  u  a        accuc 
          agcuggu  aa gg accaaauc     u
          |||||||  || || ||||||||      
          UCGACCA  UU CC UGGUUUag     u
cguaucgaug       AC  C  C        guaac 


mirna_id: tgu-mir-133-2
hairpin:
--------c        ca  c  a        cg   u 
         uggcuggu  aa gg accaagcc  ucu c
         ||||||||  || || ||||||||  ||| c
         aUCGACCA  UU CC UGGUUUgg  agg u
ugugacgau        AC  C  C        --   c 


mirna_id: tgu-mir-133-3
hairpin:
-------uaa       aa  u  a        aacug 
          agcuggu  aa gg accaaauc     u
          |||||||  || || ||||||||      
          UCGACCA  UU CC UGGUUUag     u
cgugucgaug       AC  C  C        guaac 


mirna_id: tgu-mir-375
hairpin:
--------       u      cc   u    u  c ga 
        ccuggcg cgagcc  acg gcaa ac u  c
        ||||||| ||||||  ||| |||| || |  c
        ggAUUGC GCUCGG  UGC UGUU ug a  u
accuggac       -      CU   U    U  c ag 


mirna_id: tgu-mir-130a
hairpin:
---------aga        uc         a  g -  a 
            gcccuuuu  uguuguacu cu g ca u
            ||||||||  ||||||||| || | ||  
            CGGGAAAA  AUAACGUGA ga u gu u
gacggucgguUA        UU         C  g a  a 


mirna_id: tgu-mir-92-1
hairpin:
---------c            c   u       ug gug 
          acagguugggau agu gcaaugc  u   u
          |||||||||||| ||| |||||||  |    
          UGUCCGGCCCUG UCA CGUUAUg  g   g
ugguuggagu            U   -       gu ucu 


mirna_id: tgu-mir-92-2
hairpin:
ccuugcacuga             g     uu  u   u     gua  u 
           uuucuccaugggu gggau  gu gca uacuu   gc g
           ||||||||||||| |||||  || ||| |||||   || u
           aaggaggUGUCCG CCCUG  CA CGU AUgag   ug a
--------gga             G     UU  -   U     --a  u 


mirna_id: tgu-mir-199-1
hairpin:
------   ----      U        C   U   gacu 
      gCC    CAGUGU CAGACUAC UGU cag    a
      |||    |||||| |||||||| ||| |||     
      cgg    GUUACA GUCUGAUG ACA guu    c
ucgugu   aUUG      C        -   u   agag 


mirna_id: tgu-mir-216a
hairpin:
ugaguug  u            G          -c   u 
       gc UAAUCUCAGCUG CAACUGUGAg  agu a
       || |||||||||||| ||||||||||  ||| a
       cg auuagggucgau guugacacuc  uca u
-------  u            -          uc   a 


mirna_id: tgu-mir-215
hairpin:
guccaggaaaA  A     -   U      A ---   c 
           UG CCUAU GAA UGACAG C   ugu u
           || ||||| ||| |||||| |   ||| u
           ac ggaua cuu acuguc g   acg u
------uuaua  c     u   c      c uuu   u 


mirna_id: tgu-mir-130b
hairpin:
cccccagcccggcagccgccgcagcugcugugccagcgcugggaccaccggccgggcugccCCU     CC         A  -  ca g 
                                                                CUUUC  UGUUGCACU CU gu  c g
                                                                |||||  ||||||||| || ||  |  
                                                                GAAAG  AUAACGUGA ga cg  g u
-------------------------------------------------gccgcgugacUGCGG     UA         C  g  ac c 


mirna_id: tgu-mir-217
hairpin:
auguc    AUAC     C          U  auaaua 
     gcag    UGCAU AGGAACUGAU Gg      a
     ||||    ||||| |||||||||| ||       
     cguu    acgua uccuugacua cc      u
acuuc    ----     a          -  acucac 


mirna_id: tgu-mir-454
hairpin:
---------        ---         -  -       ug 
         gacccuau   caauauugc cu cugcuuu  u
         ||||||||   ||||||||| || |||||||  g
         cUGGGAUA   GUUAUAACG GA gauggga  a
uuuucuuuu        UUC         U  U       cu 


mirna_id: tgu-mir-130c
hairpin:
uccugcaccuccucugucccugaguggugu   u             u          a  ---g   au 
                              cug ccagugcccuuuu auguuguacu cu    gug  g
                              ||| ||||||||||||| |||||||||| ||    |||   
                              gac gguUACGGGAAAA UGUAACGUGA ga    cac  a
---------------------------aac   c             U          C  aaaa   gu 


mirna_id: tgu-mir-365-1
hairpin:
------------     c           ----   -    uu 
            aggga uuuugggggca    gau gugu  c
            ||||| |||||||||||    ||| ||||  c
            UUCCU AAAAUCCCCGU    cua caca  a
acguucucguUA     A           AAUa   u    uu 


mirna_id: tgu-mir-365-2
hairpin:
ugcccuccuggggaccgacugagcggca       a        ac   c       -----    u   u 
                            gcaagaa aaugaggg  uuu aggggca     gcug guu u
                            ||||||| ||||||||  ||| |||||||     |||| ||| a
                            cguucuu uUAUUCCU  AAA UCCCCGU     ugac caa c
---------------------------a       g        AA   -       AAUac    c   u 


mirna_id: tgu-mir-16a
hairpin:
-----------u   a              -  A        U uuaagac 
            guc uacuuUAGCAGCAC GU AAUAUUGG G       u
            ||| |||||||||||||| || |||||||| |        
            cgg augaAGUCGUCGUG CA UUAUGACC c       g
gucuucaccgau   a              U  A        u uauaaau 


mirna_id: tgu-mir-32
hairpin:
cugguggaga          U            guucuc 
          UAUUGCACAU ACUAAGUUGCac      a
          |||||||||| ||||||||||||      c
          auagcgugug ugauuuaacgug      g
---------c          -            acuccg 


mirna_id: tgu-mir-193a
hairpin:
----------  u    gu    g    g  a  -----   u 
          ag cggg  uuug gggc ag ug     agc u
          || ||||  |||| |||| || ||     |||  
          UC GCCC  AAAC CCCG UC Ac     uug a
cuggugguuu  -    UG    A    G  A  cuauu   u 


mirna_id: tgu-mir-16c
hairpin:
agcagugcucU       CGUA          ---uu    a 
           AGCAGCA    AAUACUGGAG     uggg u
           |||||||    ||||||||||     ||||  
           ucgucgu    uuaugaccuc     gucc u
-----------       uacg          ucguu    g 


mirna_id: tgu-mir-18a
hairpin:
cuuuuuguacU    U   UC   U    A   -  aa u 
           AAGG GCA  UAG GCAG UAg ug  g a
           |||| |||  ||| |||| ||| ||  | g
           uucc cgu  auc cguc auc ac  u a
---------uc    u   ga   c    -   u  ga u 


mirna_id: tgu-mir-16b
hairpin:
cguuccgcccU         UA        A u  ca   a 
           AGCAGCACG  AAUAUUGG G gu  aag a
           |||||||||  |||||||| | ||  |||  
           UCGUCGUGU  UUAUAACC C ca  uuc a
----------U         UA        - -  ac   c 


mirna_id: tgu-mir-190
hairpin:
agacu    - UG               UA     uuau 
     cugu g  AUAUGUUUGAUAUAU  GGUug    u
     |||| |  |||||||||||||||  |||||     
     gaca c  uauacaaacuauaua  ucaac    u
-----    u cu               --     cuaa 


mirna_id: tgu-mir-106
hairpin:
caa  u    -AA         C G     G    guu 
   gu gugc   AAGUGCUUA A UGCAG UAGa   c
   || ||||   ||||||||| | ||||| ||||    
   ca uacg   uucacgaau u acguc aucu   a
---  u    guc         u g     -    agg 


mirna_id: tgu-mir-20b
hairpin:
cuagca    -CA           G     G   c  gg 
      guau   AAGUGCUCAUA UGCAG UAG uu  a
      ||||   ||||||||||| ||||| ||| ||  a
      caug   uucacgggugu auguc auc ag  a
------    aca           a     -   c  gu 


mirna_id: tgu-mir-200b
hairpin:
---------  g    -    UG     C      -  auc 
         ca cAUC UUAC  GGCAG AUUGGA ug   c
         || |||| ||||  ||||| |||||| ||    
         gU GUAG AAUG  CCGUC UAAUcu gc   a
uucucggaa  A    U    GU     A      c  cgu 


mirna_id: tgu-mir-216b
hairpin:
acagacug    A          C  G     ---  u  u 
        ggAA UCUCUGCAGG AA UGUGa   ug cu u
        |||| |||||||||| || |||||   || ||  
        ucuu agagaugucc uu acacu   ac ga a
--------    -          a  a     cua  -  u 


mirna_id: tgu-mir-1388
hairpin:
gccccagugaggggcac    a  a   u u         a   ---   a 
                 cucg gg cug c aaccugaga ugg   uga a
                 |||| || ||| | ||||||||| |||   |||  
                 gaGU CC GAC G UUGGACUCU acu   acu c
---------cuuccgua    A  C   U C         A   gga   a 


mirna_id: tgu-mir-301
hairpin:
-------a     C    ---U          A  g a  a 
        guGCU UGAC    UUAUUGCACU CU u cu u
        ||||| ||||    |||||||||| || | ||  
        uaCGA ACUG    GAUAACGUGA ga a ga a
cgagaguc     A    UUAU          C  g -  c 


mirna_id: tgu-mir-144
hairpin:
--  -a  -----        G         -A   ggc 
  gc  GG     AUAUCAUC UAUACUGUA  GUu   u
  ||  ||     |||||||| |||||||||  |||    
  cg  cc     UGUAGUAG AUAUGACAU  cag   a
gu  gg  ccUCA        -         ca   agu 


mirna_id: tgu-mir-15b
hairpin:
cgaagug           C              g  cu 
       cugUAGCAGCA AUCAUGGUUUGCau cu  g
       ||||||||||| |||||||||||||| ||   
       gaugucgucgu uaguacuaaacgug ga  c
-------           u              g  cu 


mirna_id: tgu-mir-34a
hairpin:
aguguuucuuUG       -   A          ---g   gc 
            GCAGUGU CUU GCUGGUUGUu    uga  a
            ||||||| ||| ||||||||||    |||  a
            cgucaua gaa cgacuaacga    acu  u
------------       u   -          agga   ga 


mirna_id: tgu-mir-223
hairpin:
-----------gu              gagucc       agu 
             guauuugacaagcu      gacacuc   g
             ||||||||||||||      |||||||    
             CAUAAACUGUUUGA      CUGUgag   u
acggagugaaCCC              ------       acg 


mirna_id: tgu-mir-2996-1
hairpin:
-------agcag    gcu     a    ucuu      c 
            cagg   gaaau ucug    gggcau u
            ||||   ||||| ||||    |||||| c
            GUCU   CUUUG AGAC    UCCgua u
caaguuacaaGA    --U     G    --CU      u 


mirna_id: tgu-mir-2996-2
hairpin:
------agcagc    cu     a    ucuu      c 
            cggg  gaaau ucug    gggcau u
            ||||  ||||| ||||    |||||| c
            GUCU  CUUUG AGAC    UCCgua u
caaguuacaaGA    -U     G    --CU      u 


mirna_id: tgu-mir-29b-1
hairpin:
------------         u      gu      uuaac 
            cugguuuca auggug  uuagau     u
            ||||||||| ||||||  ||||||     a
            GACUAAAGU UACCAC  GAUcug     u
ggagguucuuGU         U      --      uuacu 


mirna_id: tgu-mir-29b-2
hairpin:
------------         C      G  U    uuucc 
            cUGGUUUCA AUGGUG CU AGAu     c
            ||||||||| |||||| || ||||     a
            GACUAAAGU UACCAC GA Ucua     c
cgaggaucuuGU         U      -  -    uguuu 


mirna_id: tgu-mir-146b
hairpin:
ugcuuggcu   -          U       -    gaag 
         cUG AGAACUGAAU CCAUAGG CGuu    c
         ||| |||||||||| ||||||| ||||    c
         gaC UCUUGACUUA GGUAUCC GUaa    u
--------c   G          -       C    aacc 


mirna_id: tgu-mir-214
hairpin:
gacggag          u          aca            aacau 
       uugucaugug cugccugucu   cuugcugugcag     c
       |||||||||| ||||||||||   ||||||||||||     c
       aacaguacgc GACGGACAGA   GGACGACAuguc     u
-------          U          CAC            cacuc 


mirna_id: tgu-mir-2997
hairpin:
--------cA                 CA   u    g 
          AACAUGUCCAAGUUCCU  CAg gcug c
          |||||||||||||||||  ||| ||||  
          UUGUACAGGUUCGAGGA  guc ugau a
cuuacgugga                 -C   -    g 


mirna_id: tgu-mir-203
hairpin:
gcgggcggggagcgcgcccccgccccgcugcgcuccccgcggacccucag    c     gc         u    g    a     cuc 
                                                  ccuc uuggu  agugguucu aaca uuca caguu   u
                                                  |||| |||||  ||||||||| |||| |||| |||||   a
                                                  ggag gacca  UCACCAGGA UUGU AAGU Guuaa   g
--------------------------------------------------    c     GU         U    A    -     uac 


mirna_id: tgu-mir-147
hairpin:
--------   ug   u           aaacuugacu    a 
        uag  gaa cauuucugcac          acug a
        |||  ||| |||||||||||          ||||  
        auC  CUU GUAAAGGCGUG          UGac a
auuuuuac   GU   C           ----------    u 


mirna_id: tgu-mir-18b
hairpin:
--------------------------acuucuggcauuacuguggcgauuc      -ggu     g   cgg    aac 
                                                   cguggu    ggcag gca   acaa   c
                                                   ||||||    ||||| |||   ||||    
                                                   gcaccg    ccguc ugu   uguu   a
cgauguagugAUUGACGUGAUCUACGUGGAAUuguguuccuggaaaacguc      gauu     g   ---    agg 


mirna_id: tgu-mir-193b
hairpin:
--------      U     CG   G  A    ---  g 
        gcUGGG CUUUG  GGC AG UGAg   ag u
        |||||| |||||  ||| || ||||   ||  
        UGACCC GAAAC  CCG UC acuu   uc u
ucggcucU      U     AU   G  A    cug  c 


mirna_id: tgu-mir-146c
hairpin:
uucucagcuuU         A           guaau   auc 
           GAGAACUGA UUCCAUGGGUU     uga   u
           ||||||||| |||||||||||     |||    
           uucuugacu gggguacccag     acu   g
-----------         c           -----   guc 


mirna_id: tgu-mir-455
hairpin:
---------gg          U      A   C   gaa 
           gUAUGUGCCC UGGACU CAU Gug   g
           |||||||||| |||||| ||| |||    
           CAUAUACGGG ACCUGA GUa cac   c
aacuccguucA          U      C   c   gac 


mirna_id: tgu-mir-19a
hairpin:
----                 --      u  aagaa 
    cuguuaguuuugcauag  uugcac ac     g
    |||||||||||||||||  |||||| ||      
    gguaguCGAAACGUAUC  AACGUG ug     a
cggu                 UA      U  gugag 


mirna_id: tgu-mir-155
hairpin:
cuguaugu            U    A        uuuac 
        ugUUAAUGCUAA CGUG UAGGGguu     c
        |||||||||||| |||| ||||||||     u
        ACAAUUACGAUU GCAC AUCCUCag     a
--------            -    -        ucagu 


mirna_id: tgu-mir-30d
hairpin:
-----------  U         CCC            uac 
           gc GUAAACAUC   GACUGGAAGCUg   c
           || |||||||||   ||||||||||||   u
           CG CGUUUGUAG   CUGACUUUcgac   g
guaucgguccA  U         --A            cuc 


mirna_id: tgu-mir-460a
hairpin:
-----   -     caC UG       CACACUGUGUgugugg 
     cuu uauag   C  CAUUGUA                c
     ||| |||||   |  |||||||                 
     gaa auguc   G  GUAACAU                u
ucgcu   c     UUA GU       ACGCGACACguaaagg 


mirna_id: tgu-mir-31
hairpin:
       -a      ---  u      gA     G             -U   gau 
uuccuuu  ugcaga   gc ggagag  GGCAA AUGUUGGCAUAGC  Guu   c
|||||||  ||||||   || ||||||  ||||| |||||||||||||  |||    
agggaga  gcguuu   ug ccuuuc  cuguu uacaaccguaucg  caa   u
       cg      guc  u      ua     a             uc   aaa 


mirna_id: tgu-mir-205
hairpin:
     c    u CC       C   C        ---  ga 
gccuu cugg g  CUUCAUU CAC GGAAUCUG   uc  u
||||| |||| |  ||||||| ||| ||||||||   ||   
cggaa gacu c  gaaguaa gug cuuuaggc   ag  g
     a    c cc       a   a        cca  ac 


mirna_id: tgu-mir-199-2
hairpin:
      ---gg  a   u  u       ---   AG       A   -  --   U    acaa     u 
gcgucc     ag ucc gc ccgucgc   CCC  UGUUCAG CUA CC  UGU cagg    ugcug u
||||||     || ||| || |||||||   |||  ||||||| ||| ||  ||| ||||    ||||| g
cgcagg     uc agg ug ggcggcg   ggg  acggguc gaU GG  ACA GUCU    AUGAC u
      gguua  -   -  c       aaa   -a       a   U  UU   C    ---G     A 


mirna_id: tgu-mir-135a-2
hairpin:
      c                  AU          uug uu 
ccucug ugugguuUAUGGCUUUUU  UCCUAUGUGA   c  u
|||||| ||||||||||||||||||  ||||||||||   |   
ggagac acaucggguaccgaaaag  gggauguacu   g  c
      -                  -c          caa cc 


mirna_id: tgu-mir-489
hairpin:
u   --ac ug ug c    ug             c      ua     a 
 guc    g  g  g uugg  gucguauguauga gucauu  cuugg c
 |||    |  |  | ||||  ||||||||||||| ||||||  |||||  
 cag    c  c  c aauC  CGGCAUGUAUACU CAGUGa  ggauu u
a   ggua gu gu a    GU             A      --     u 


mirna_id: tgu-mir-15c
hairpin:
        a    UA     A  UC          gggac 
cuuugagg gaug  GCAGC CA  AUGGUUUGUa     a
|||||||| ||||  ||||| ||  ||||||||||      
ggaacucc uuac  cgucg gu  uaccagacau     a
        a    uc     g  cu          agagg 


mirna_id: bmo-mir-2998
hairpin:
        GA  A   -  -   AA    uu    ag  g     --  a 
AAGAACAG  UG GGU AG AUA  cagg  aagg  ug cugga  ac a
||||||||  || ||| || |||  ||||  ||||  || |||||  || g
uucuuguu  ac ccg uc uau  gucu  uuuc  au ggcuu  ug g
        -a  -   a  a   aa    --    ga  g     au  a 


mirna_id: bmo-mir-2999
hairpin:
 g      -  -----    C   --G        --------------     -uu   cu   g 
c cccgcg cg     gCUG GAC   GACUAGAC              GCGCA   uuc  cgg c
| |||||| ||     |||| |||   ||||||||              |||||   |||  |||  
g gggugu gc     ugau uug   uugauuug              cgcgu   aag  guc u
 g      u  auuau    u   uua        uuuauugacuuuga     ucc   uu   g 


mirna_id: bmo-mir-2733f
hairpin:
    ---c   au   uaauc       aaaa   a        ua       a      u 
acgu    uac  ugc     ugucuau    gac guuauuac  acucggu gacacg c
||||    |||  |||     |||||||    ||| ||||||||  ||||||| ||||||  
ugca    aug  gcg     auagaua    cUG CAGUAAUG  UGGGUCA CUgugu a
    aacc   cu   --cua       guug   A        UA       -      c 


mirna_id: bmo-mir-2733g
hairpin:
     -  G  U C    A      gg  c     ucauc   -------------     c 
uaUCA CU GG G AUGA GAUUGu  ua agaga     aca             ucacg c
||||| || || | |||| ||||||  || |||||     |||             |||||  
auagu ga uc c uacu cugacg  au ucucu     ugu             agugc g
     u  g  u a    a      ua  c     cuuuc   cgaucuucucuac     c 


mirna_id: bmo-mir-2733a-2
hairpin:
       -     U C            a        -------ucaccaca     c  cc 
uauaUCA CUGGG G AUGAUGAUUGUg uagagaga               ucacg ug  a
||||||| ||||| | |||||||||||| ||||||||               ||||| ||   
guauagu gacuc c uacuacugacgu aucucucu               agugu ac  u
       u     u a            a        cuauaucuucucuac     -  au 


mirna_id: bmo-mir-2733h
hairpin:
        au             u  g   u    -u  g 
ucucucua  gcagucaucauac cu agu gaua  gu g
||||||||  ||||||||||||| || ||| ||||  || a
agagagau  uGUUAGUAGUAUG GG UCA CUau  ua a
        gg             U  G   -    cu  a 


mirna_id: bmo-mir-3000
hairpin:
   ag     ---c     aauag     ugggucuaCU       G   -AA     U      u 
aua  guacu    guagu     ucugu          GCGCUUA AUG   GACAC Acauua g
|||  |||||    |||||     |||||          ||||||| |||   ||||| |||||| u
ugu  cguga    cguca     agaca          cgcgaau uac   uugug ugugau a
   ga     aacu     -guaa     ---------u       g   cac     u      u 


mirna_id: bmo-mir-3001
hairpin:
guaugugauuca    -   uU   U        UU   --       Auuccg   ucg 
            gaug cgu  AAG UGAAAGAA  GUA  GAUUUUG      uuu   c
            |||| |||  ||| ||||||||  |||  |||||||      |||    
            cuac gcg  uuc guuuucuu  uau  uuaagac      aaa   c
cgauuaccggaa    u   gu   u        uu   ag       gacuua   uaa 


mirna_id: hma-mir-3002
hairpin:
uucu u       -       UUGU     Gag 
    g agUAGAA GAUAAGA    GGCCA   a
    | ||||||| |||||||    |||||   a
    c ucgucuu cuauucu    ucggu   u
cccu u       a       cugu     aau 


mirna_id: hma-mir-3003a
hairpin:
a  c       a         AA       C      u 
 ag uauuuau ucaUUACCA  UUGCACA UUAACa a
 || ||||||| |||||||||  ||||||| ||||||  
 uc auaaaua AGUAAUGGU  AACGUGU AAUugu a
g  -       a         CA       A      c 


mirna_id: hma-mir-3003b
hairpin:
ugc       a           G             u 
   uauuuau ucaUUACCAGU UGCACAUUUAACa u
   ||||||| ||||||||||| |||||||||||||  
   auaaaua aGUAAUGGUCA GCGUGUAAAUUgu a
guc       a           A             u 


mirna_id: hma-mir-3004
hairpin:
uga   a        cau      a        uaa 
   aua ccaccaag   ucagaa aaauaguu   c
   ||| ||||||||   |||||| ||||||||   u
   ugu gguGGUUC   GGUUUU UUUAUCAA   u
-aa   a        --U      G        uua 


mirna_id: hma-mir-3005
hairpin:
aua        a        c      gu        a 
   aacugaaa uuuaggaa cgguca  cgccaacc u
   |||||||| |||||||| ||||||  |||||||| g
   uugacuuu aAAUCCUU GUUAGU  GUGGUUgg u
uaa        a        A      AG        u 


mirna_id: hma-mir-3006
hairpin:
gug        -       cu       gcaa        --g     u 
   guauauua gcuaauu  gugugcu    uuuuguua   gucga u
   |||||||| |||||||  |||||||    ||||||||   |||||  
   uauauaau uggUUAG  UAUACGA    AGGAUAAU   UAGUu c
ucg        g       --       ---G        AUU     g 


mirna_id: hma-mir-3007
hairpin:
uug            C            UG   u 
   ugucaacaUGUU GGCGUUUUUACC  CAg g
   |||||||||||| ||||||||||||  ||| u
   acaguuGUACAA CCGCAAAAAUGG  guc a
aaa            A            GU   a 


mirna_id: hma-mir-3008
hairpin:
uug              AG          A 
   uugucgUCAGCUGU  UUGACGACAA U
   ||||||||||||||  ||||||||||  
   aacagcagucgacg  aacugcuguu a
aua              -g          a 


mirna_id: hma-mir-3009
hairpin:
uca         cu           a       
   aacuuuuau  gugacuuugau aaaaug 
   |||||||||  ||||||||||| ||||| a
   uugaaAAUA  CACUGAAACUA UUUuaa 
cua         AU           C       


mirna_id: hma-mir-3010
hairpin:
aaaa    g            a        g   u 
    ucua gcaaauuuauuu ugcgcucu auu a
    |||| |||||||||||| |||||||| |||  
    agau cGUUUAAAUAAA ACGCGAGA Uaa a
-uua    a            A        G   a 


mirna_id: hma-mir-3011
hairpin:
au    c                -uu      g    g 
  gauu uuucguaaaucauuuu   gaauca aggg a
  |||| ||||||||||||||||   |||||| ||||  
  uuaa aaagCAUUUAGUAAGG   UUUAGU Uccu a
ag    a                UAU      -    g 


mirna_id: hma-mir-3012a
hairpin:
aa  a   a                 a   cuu 
  gg aaa cuuucugcaaauccacu aug   u
  || ||| ||||||||||||||||| |||    
  cc UUU GAAAGAUGUUUAGGUGA Uac   u
ga  a   C                 C   uua 


mirna_id: hma-mir-3012b
hairpin:
gaa  a             u       a   c 
   gg aaaacuuucugua auccacu aug u
   || ||||||||||||| ||||||| |||  
   cc UUUUGAAAGAUGU UAGGUGA Uac u
uaa  A             U       C   u 


mirna_id: hma-mir-3013
hairpin:
aaa      UC  AC   --         -AAUGu     -  a 
   ugaUGG  UG  UUC  GCUAUAGAG      aagcu cc c
   ||||||  ||  |||  |||||||||      ||||| ||  
   acuacc  ac  aag  ugauauuuu      uuuga gg c
aua      -u  cc   uu         guaguc     c  a 


mirna_id: hma-mir-3014
hairpin:
-gcu         cugaa        u a  au 
    gaacgucgg     ugucuguu g cc  u
    |||||||||     |||||||| | ||  c
    uuuGCAGCC     ACAGACAA C gg  a
ccac         AAAAC        C -  cu 


mirna_id: hma-mir-2030
hairpin:
auu   a          a  u       aa  u 
   ccc ggguagcaua ca uguaaga  ca u
   ||| |||||||||| || |||||||  || u
   ggg ccCAUCGUGU GU ACAUUCU  gu a
gau   a          C  C       GC  u 


mirna_id: api-mir-100
hairpin:
-u   aaa       u   acGA  CG    UC          uc  aaa 
  gug   acugagu gcu    CC  UAGA  CGAACUUGUG  gc   g
  |||   ||||||| |||    ||  ||||  ||||||||||  ||    
  cac   ugacuca cga    gg  aucu  gcuugaacac  ug   u
cu   --g       c   caua  ag    uu          ua  auu 


mirna_id: hsv1-mir-H11
hairpin:
                                                               u 
gggcguggccgcuauuauaaaaaaagugagaacgcgaagcguucgcacuuuguccuaauaaua a
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  
cccgcaccggcgauaauauuuuuuucacucuugcgcuuCGCAAGCGUGAAACAGGAUUauuau u
                                                               a 


mirna_id: hsv1-mir-H12
hairpin:
     c   c   g  cc    c          c       aua 
ggagu ggg acg cg  agug ucgcacuucg ccuaaua   u
||||| ||| ||| ||  |||| |||||||||| |||||||   a
cuuca cuc ugc gc  UCGC AGCGUGAAGC GGGUUau   u
     -   u   -  -U    A          A       aua 


mirna_id: hsv1-mir-H13
hairpin:
   -a  c               c    uau 
gcg  ag guucgcacuucgucc aaua   a
|||  || ||||||||||||||| ||||   u
cgc  UC CGAGCGUGAAGCGGG UUau   a
   GG  A               A    uau 


mirna_id: hsv1-mir-H14
hairpin:
          -  A       U  U   U   U     - gcgaac 
gccgugugcc cc GUCGCAC CG CCC GGC CAGGc c      c
|||||||||| || ||||||| || ||| ||| ||||| |       
cggcgcgcgg gg CAGCGUG GC GGG CCG GUCUg g      a
          u  -       C  -   -   U     a acaaga 


mirna_id: hsv1-mir-H15
hairpin:
   -a     caugc     g  g      -     c  g          uug  u 
acc  cagcg     gccgg cc uugugg ggccc gg ccggggcccc   gg c
|||  |||||     ||||| || |||||| ||||| || ||||||||||   ||  
ugg  guugc     cggcc gg gGCACC CCGGG CC GGCCCCGGgg   cc c
   cg     -----     -  g      G     -  G          ---  g 


