# mirna

mirna_acc: MI0000001
mirna_id: cel-let-7
previous_mirna_id: cel-let-7L
description: Caenorhabditis elegans let-7 stem-loop
sequence: UACACUGUGGAUCCGGUGAGGUAGUAGGUUGUAUAGUUUGGAAUAUUACCACCGGUGAACUAUGCAAUUUUCUACCUUACCGGAGACAGAACUCUUCGA
organism: cel
comment:
let-7 is found on chromosome X in Caenorhabditis elegans [1] and pairs to sites within the 3' untranslated region (UTR) of target mRNAs, specifying the translational repression of these mRNAs and triggering the transition to late-larval and adult stages [2]. 


mirna_acc: MI0000002
mirna_id: cel-lin-4
previous_mirna_id: cel-lin-4L
description: Caenorhabditis elegans lin-4 stem-loop
sequence: AUGCUUCCGGCCUGUUCCCUGAGACCUCAAGUGUGAGUGUACUAUUGAUGCUUCACACCUGGGCUCUCCGGGUACCAGGACGGUUUGAGCAGAU
organism: cel
comment:
lin-4 is found on chromosome II in Caenorhabditis elegans [1] and is complementary to sequences in the 3' untranslated region (UTR) of lin-14 mRNA. lin-4 acts to developmentally repress the accumulation of lin-14 protein. This repression is essential for the proper timing of numerous events of Caenorhabditis elegans larval development [2]. 


mirna_acc: MI0000003
mirna_id: cel-mir-1
description: Caenorhabditis elegans miR-1 stem-loop
sequence: AAAGUGACCGUACCGAGCUGCAUACUUCCUUACAUGCCCAUACUAUAUCAUAAAUGGAUAUGGAAUGUAAAGAAGUAUGUAGAACGGGGUGGUAGU
organism: cel
comment:
miR-1 was independently identified in C. elegans [1,2] and Drosophila melanogaster (MIR:MI0000116) [3].  The sequence is also conserved in C. briggsae (MIR:MI0000493). 


mirna_acc: MI0000013
mirna_id: cel-mir-42
description: Caenorhabditis elegans miR-42 stem-loop
sequence: UUCGCGGACCUUUGUGGGUGUUUGCUUUUUCGGUGAAGUUGUCUUCCGUAGCUUCUUCUUCACCGGGUUAACAUCUACAGAGGUCCAAAAAGGGG
organism: cel
comment:
The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [5]. 


mirna_acc: MI0000021
mirna_id: cel-mir-50
description: Caenorhabditis elegans miR-50 stem-loop
sequence: CUGCCCGCCGGCCGCUGAUAUGUCUGGUAUUCUUGGGUUUGAACUUCCAGCGUUGAACCCGCAUAUUAGACGUAUCGACGGCCGGCGGGGCAGGUAAUG
organism: cel
comment:
The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [3]. 


mirna_acc: MI0000022
mirna_id: cel-mir-51
description: Caenorhabditis elegans miR-51 stem-loop
organism: cel
sequence:
GUCCGAAAAGUCCGUCUACCCGUAGCUCCUAUCCAUGUUACUGGUCAAAAAGUGAACAUGGAAGCAGGUACAGGUGCACGGCGAGUAGGGUCAUGAAGCU


mirna_acc: MI0000023
mirna_id: cel-mir-52
description: Caenorhabditis elegans miR-52 stem-loop
organism: cel
sequence:
UCCAACUCUAACAGUCCACCCGUACAUAUGUUUCCGUGCUUGACAGCGAAGCUCAAUCACGUUACAAUGAAAGGGUAGCCGGUUAUUGAAGUUGGGUCUU


mirna_acc: MI0000030
mirna_id: cel-mir-59
description: Caenorhabditis elegans miR-59 stem-loop
organism: cel
sequence:
AGUUGAUCUAGAUAUGACAUCGUCCUGAAAACGAAACGGAACAAAAGUUCAAGAUAUUGAUUUCGAAUCGUUUAUCAGGAUGAUGUGAUUAAAAUCAACU


mirna_acc: MI0000032
mirna_id: cel-mir-61
description: Caenorhabditis elegans miR-61 stem-loop
sequence: UUCCAUUAUCGCUGAACCUCGAGAUGGGUUACGGGGCUUAGUCCUUCCUCCGUAUGGCAAUGACUAGAACCGUUACUCAUCUCGAGGUUUCGGUGAU
organism: cel
comment:
The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [4]. 


mirna_acc: MI0000034
mirna_id: cel-mir-63
description: Caenorhabditis elegans miR-63 stem-loop
organism: cel
sequence:
UCAACAAGCAGACACAAUUUCUAACUCGUCGGUAGUCAUCGUUCUAGCUGAAAAGGACACUAUGACACUGAAGCGAGUUGGAAAUAGUGGUUCUACUUGAGCAA


mirna_acc: MI0000035
mirna_id: cel-mir-64
description: Caenorhabditis elegans miR-64 stem-loop
organism: cel
sequence:
CUCCCCGCUGACCUCGCCGAAUAUGACACUGAAGCGUUACCGAACCGUUUUCCCACACCUGGAUUCGGUGCAACGAUCAGUGGCAUGCUCGGCUAGCGCCAGUUAAGUAU


mirna_acc: MI0000036
mirna_id: cel-mir-65
description: Caenorhabditis elegans miR-65 stem-loop
organism: cel
sequence:
AUGGAGCCUUCGCCGAUUAUGACACUGAAGCGUAACCGAACACCAUAUUUUGAGAUUCUGCUACGCGCAGUGCCAUGCUCGGCGCGUUGGCUCCAUUAAA


mirna_acc: MI0000041
mirna_id: cel-mir-70
description: Caenorhabditis elegans miR-70 stem-loop
organism: cel
sequence:
UCAAAAUAAAACGAUGAAAACUAUCGAAAUACUAUCGACGAAUAACACUUAUGAAGAAAUGUAAUACGUCGUUGGUGUUUCCAUAGUUUGAAUUGUUUAU


mirna_acc: MI0000043
mirna_id: cel-mir-72
description: Caenorhabditis elegans miR-72 stem-loop
sequence: AGGUCCCGUCAGAGCUAGGCAAGAUGUUGGCAUAGCUGAAUGAUCGCUAUAACAACUAUCAGCUUCGCCACAUUCUGCCACGCACUGAUGUGAGGACCU
organism: cel
comment:
The expression of C. elegans miR-72 was confirmed by PCR amplification, cloning and sequencing. The predicted hairpin precursor sequence presented here is supported by conservation in C. elegans and C. briggsae (MIR:MI0000751), and differs from that shown in [1] (Uwe Ohler, pers. comm.).  The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [5]. 


mirna_acc: MI0000048
mirna_id: cel-mir-77
description: Caenorhabditis elegans miR-77 stem-loop
organism: cel
sequence:
GCAUCUGCCAAACCGCCCGUUUGGAUGGUUGUGCUCUGAGGAAAUACGCACAGAAUGUCAUUUCAUCAGGCCAUAGCUGUCCAAAUUGGUAUAGAGUUUG


mirna_acc: MI0000051
mirna_id: cel-mir-80
description: Caenorhabditis elegans miR-80/miR-227 stem-loop
sequence: AUGGACACUCGUUCGCUCAGCUUUCGACAUGAUUCUGAACAAUCCGCAAGCCCAUGUUGUUGAGAUCAUUAGUUGAAAGCCGAAUGAUCAGAGAUAUC
organism: cel
comment:
mir-80 is conserved in C.briggsae (MIR:MI0000518) [1].  Reference [3] reports the identification of miR-227, which appears to be expressed from the 5' arm of the same precursor. 


mirna_acc: MI0000052
mirna_id: cel-mir-81
description: Caenorhabditis elegans miR-81 stem-loop
organism: cel
sequence:
AUCAGUGCCAUCGUGCCCAACAGUCGGUUUUCACCGUGAUCUGAGAGCAAUCCAAAAAUGCUUUUCUGAGAUCAUCGUGAAAGCUAGUUGUUGGUCUACGGGCUUUUG


mirna_acc: MI0000056
mirna_id: cel-mir-85
description: Caenorhabditis elegans miR-85 stem-loop
organism: cel
sequence:
UAUAGAAUUUUGGCGUCGGAGCCCGAUUUUUCAAUAGUUUGAAACCAGUGUACACAUAAAUGGUUACAAAGUAUUUGAAAAGUCGUGCUCUGAAAAUGAAUUCUUA


mirna_acc: MI0000058
mirna_id: cel-mir-87
description: Caenorhabditis elegans miR-87 stem-loop
sequence: GGUUGUGCCAUCCGGCCGCCUGAUACUUUCGUCUCAACCUCGCUGUCAGAUUGGUCGUAGGUGAGCAAAGUUUCAGGUGUGCCGGAACACACCC
organism: cel
comment:
mir-87 is has found to be most abundant in the L1 stage of larval development in Caenorhabditis elegans. mir-87 orthologues have been found in C. briggsae, Drosophila melanogaster and humans [1].  The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [4]. 


mirna_acc: MI0000059
mirna_id: cel-mir-90
description: Caenorhabditis elegans miR-90 stem-loop
sequence: GGGCGCCAUUUCGAGCGGCUUUCAACGACGAUAUCAACCGACAACUCACACUUUUGCGUGUUGAUAUGUUGUUUGAAUGCCCCUUGAAUUGGAUGCCA
organism: cel
comment:
mir-90 is has found to be most abundant in the L1 stage of larval development in Caenorhabditis elegans [1].  The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [4]. 


mirna_acc: MI0000060
mirna_id: hsa-let-7a-1
previous_mirna_id: hsa-let-7a-1L
description: Homo sapiens let-7a-1 stem-loop
sequence: UGGGAUGAGGUAGUAGGUUGUAUAGUUUUAGGGUCACACCCACCACUGGGAGAUAACUAUACAAUCUACUGUCUUUCCUA
organism: hsa
comment:
let-7a-3p cloned in [6] has a 1 nt 3' extension (U), which is incompatible with the genome sequence. 


mirna_acc: MI0000065
mirna_id: hsa-let-7d
previous_mirna_id: hsa-let-7dL
description: Homo sapiens let-7d stem-loop
sequence: CCUAGGAAGAGGUAGUAGGUUGCAUAGUUUUAGGGCAGGGAUUUUGCCCACAAGGAGGUAACUAUACGACCUGCUGCCUUUCUUAGG
organism: hsa
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000069
mirna_id: hsa-mir-15a
previous_mirna_id: hsa-mir-15
description: Homo sapiens miR-15a stem-loop
sequence: CCUUGGAGUAAAGUAGCAGCACAUAAUGGUUUGUGGAUUUUGAAAAGGUGCAGGCCAUAUUGUGCUGCCUCAAAAAUACAAGG
organism: hsa
comment:
Reference [1] named this sequence miR-15.  This is renamed miR-15a here to avoid confusion with miR-15b (MIR:MI0000438) identified later by others. This gene and miR-16 are clustered within 0.5 kb at 13q14.  This region has been shown to be deleted in more than half of B cell chronic lymphocytic leukemias (CLL).  Both miR-15a and miR-16 are deleted or down-regulated in more than two thirds of CLL cases [2]. 


mirna_acc: MI0000070
mirna_id: hsa-mir-16-1
previous_mirna_id: hsa-mir-16-13;hsa-mir-16
description: Homo sapiens miR-16-1 stem-loop
sequence: GUCAGCAGUGCCUUAGCAGCACGUAAAUAUUGGCGUUAAGAUUCUAAAAUUAUCUCCAGUAUUAACUGUGCUGCUGAAGUAAGGUUGAC
organism: hsa
comment:
Human miR-16 has been cloned by independent groups [1,2].  This precursor sequence maps to chromosome 13, and was named mir-16 in [1] and mir-16-precursor-13 in [2].  Lim et al. reported 2 identical chromosome 13 loci, which appear to map to the same locus in subsequent genome assemblies. This gene and miR-15a are clustered within 0.5 kb at 13q14. This region has been shown to be deleted in more than half of B cell chronic lymphocytic leukemias (CLL).  Both miR-15a and miR-16 are deleted or down-regulated in more than two thirds of CLL cases [3].  A second putative mir-16 hairpin precursor is located on chromosome 3 (MIR:MI0000738). 


mirna_acc: MI0000072
mirna_id: hsa-mir-18a
previous_mirna_id: hsa-mir-18
description: Homo sapiens miR-18a stem-loop
sequence: UGUUCUAAGGUGCAUCUAGUGCAGAUAGUGAAGUAGAUUAGCAUCUACUGCCCUAAGUGCUCCUUCUGGCA
organism: hsa
comment:
This sequence maps to chromosome 13 and is named miR-18 precursor-13 in reference [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5]. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5]. 


mirna_acc: MI0000077
mirna_id: hsa-mir-21
description: Homo sapiens miR-21 stem-loop
sequence: UGUCGGGUAGCUUAUCAGACUGAUGUUGACUGUUGAAUCUCAUGGCAACACCAGUCGAUGGGCUGUCUGACA
organism: hsa
comment:
Mourelatos et al. named this sequence miR-21 precursor-17 and also reported the exact reverse complement of this predicted stem-loop sequence and erroneously assigned the name miR-104 [2]. 


mirna_acc: MI0000079
mirna_id: hsa-mir-23a
previous_mirna_id: hsa-mir-23
description: Homo sapiens miR-23a stem-loop
sequence: GGCCGGCUGGGGUUCCUGGGGAUGGGAUUUGCUUCCUGUCACAAAUCACAUUGCCAGGGAUUUCCAACCGACC
organism: hsa
comment:
This miRNA was previously named miR-23 [1,2] but is renamed here to avoid confusion with the more recently described miR-23b (MIR:MI0000439). Kawasaki and Taira reported that miR-23 regulates the transcriptional repressor Hairy enhancer of split (HES1) [3].  This finding was later retracted after the discovery that the regulated gene was human homolog of ES1 (HES1), whose function is unknown. 


mirna_acc: MI0000081
mirna_id: hsa-mir-24-2
description: Homo sapiens miR-24-2 stem-loop
sequence: CUCUGCCUCCCGUGCCUACUGAGCUGAAACACAGUUGGUUUGUGUACACUGGCUCAGUUCAGCAGGAACAGGG
organism: hsa
comment:
mir-24-2 was identified independently by two groups.  This sequence was named miR-24 precursor-19 in reference [2]. 


mirna_acc: MI0000083
mirna_id: hsa-mir-26a-1
previous_mirna_id: hsa-mir-26a
description: Homo sapiens miR-26a-1 stem-loop
sequence: GUGGCCUCGUUCAAGUAAUCCAGGAUAGGCUGUGCAGGUCCCAAUGGGCCUAUUCUUGGUUACUUGCACGGGGACGC
organism: hsa
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [6]. 


mirna_acc: MI0000084
mirna_id: hsa-mir-26b
description: Homo sapiens miR-26b stem-loop
sequence: CCGGGACCCAGUUCAAGUAAUUCAGGAUAGGUUGUGUGCUGUCCAGCCUGUUCUCCAUUACUUGGCUCGGGGACCGG
organism: hsa
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000085
mirna_id: hsa-mir-27a
previous_mirna_id: hsa-mir-27
description: Homo sapiens miR-27a stem-loop
sequence: CUGAGGAGCAGGGCUUAGCUGCUUGUGAGCAGGGUCCACACCAAGUCGUGUUCACAGUGGCUAAGUUCCGCCCCCCAG
organism: hsa
comment:
This miRNA was previously named miR-27 [1,2] but is renamed here to avoid confusion with the more recently described miR-27b (MIR:MI0000440). 


mirna_acc: MI0000087
mirna_id: hsa-mir-29a
previous_mirna_id: hsa-mir-29
description: Homo sapiens miR-29a stem-loop
sequence: AUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAUAAUUUUCUAGCACCAUCUGAAAUCGGUUAU
organism: hsa
comment:
miR-29a was previously know as miR-29 here and in [1].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [6]. 


mirna_acc: MI0000088
mirna_id: hsa-mir-30a
previous_mirna_id: hsa-mir-30
description: Homo sapiens miR-30a stem-loop
sequence: GCGACUGUAAACAUCCUCGACUGGAAGCUGUGAAGCCACAGAUGGGCUUUCAGUCGGAUGUUUGCAGCUGC
organism: hsa
comment:
The mature sequences miR-30 [1] and miR-97 [2] appear to originate from the same precursor.  Subsequent data confirm that both arms of the precursor appear to give rise to mature miRNA sequences (Pfeffer S, pers. comm.).  Landgraf et al. later showed that the 5' product is the predominant one [5].  Related miRNAs are processed from the 5' arms of other precursor loci (mir-30b, MIR:MI0000441; mir-30c-1, MIR:MI0000736; mir-30c-2, MIR:MI0000254; mir-30d, MIR:MI0000255; mir-30e, MI0000749). 


mirna_acc: MI0000089
mirna_id: hsa-mir-31
description: Homo sapiens miR-31 stem-loop
sequence: GGAGAGGAGGCAAGAUGCUGGCAUAGCUGUUGAACUGGGAACCUGCUAUGCCAACAUAUUGCCAUCUUUCC
organism: hsa
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000090
mirna_id: hsa-mir-32
description: Homo sapiens miR-32 stem-loop
sequence: GGAGAUAUUGCACAUUACUAAGUUGCAUGUUGUCACGGCCUCAAUGCAAUUUAGUGUGUGUGAUAUUUUC
organism: hsa
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000093
mirna_id: hsa-mir-92a-1
previous_mirna_id: hsa-mir-92-13;hsa-mir-92-1
description: Homo sapiens miR-92a-1 stem-loop
sequence: CUUUCUACACAGGUUGGGAUCGGUUGCAAUGCUGUGUUUCUGUAUGGUAUUGCACUUGUCCCGGCCUGUUGAGUUUGG
organism: hsa
comment:
Human miR-92a (previously named miR-92 here) has two predicted hairpin precursor sequences: mir-92a-1 (MIR:MI0000093) on chromosome 13 (named mir-92-13 in [1]) and mir-92a-2 (MIR:MI0000094) on chromosome X (named mir-92-X in [1]).  miR-92a has also been cloned from mouse embryonic stem cells [2] and is predicted to be expressed from two closely related precursor hairpins (MIR:MI0000719 and MIR:MI0000580).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [7]. 


mirna_acc: MI0000095
mirna_id: hsa-mir-93
previous_mirna_id: hsa-mir-93-7.1;hsa-mir-93-1
description: Homo sapiens miR-93 stem-loop
sequence: CUGGGGGCUCCAAAGUGCUGUUCGUGCAGGUAGUGUGAUUACCCAACCUACUGCUGAGCUAGCACUUCCCGAGCCCCCGG
organism: hsa
comment:
Mourelatos et al. identified two copies of this sequence mapping to chromosome 7, and assigned the names mir-93-7.1 and mir-93-7.2 [1]. Subsequent genome assemblies suggest the presence of only one miR-93 locus on chromosome 7.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000098
mirna_id: hsa-mir-96
previous_mirna_id: hsa-mir-96-7
description: Homo sapiens miR-96 stem-loop
sequence: UGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAA
organism: hsa
comment:
This sequence is localised to chromosome 7 and was named mir-96-7 in reference [1].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000100
mirna_id: hsa-mir-98
previous_mirna_id: hsa-mir-98-X
description: Homo sapiens miR-98 stem-loop
organism: hsa
sequence:
AGGAUUCUGCUCAUGCCAGGGUGAGGUAGUAAGUUGUAUUGUUGUGGGGUAGGGAUAUUAGGCCCCAAUUAGAAGAUAACUAUACAACUUACUACUUUCCCUGGUGUGUGGCAUAUUCA

comment:
This sequence is localised to chromosome X and was named mir-98-X in reference [1].  The predicted stem-loop precursor sequence is clearly related to let-7. 


mirna_acc: MI0000103
mirna_id: hsa-mir-101-1
previous_mirna_id: hsa-mir-101-1;hsa-mir-101
description: Homo sapiens miR-101-1 stem-loop
sequence: UGCCCUGGCUCAGUUAUCACAGUGCUGAUGCUGUCUAUUCUAAAGGUACAGUACUGUGAUAACUGAAGGAUGGCA
organism: hsa
comment:
Reference [1] reports two miR-101 precursor hairpin structures in human, on chromosome 1 (MIR:MI0000103) and 9 (MIR:MI0000739, named mir-101-precursor-9 in [1]).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000105
mirna_id: hsa-mir-29b-1
previous_mirna_id: hsa-mir-102-7.1;hsa-mir-102-2;hsa-mir-29b-2
description: Homo sapiens miR-29b-1 stem-loop
sequence: CUUCAGGAAGCUGGUUUCAUAUGGUGGUUUAGAUUUAAAUAGUGAUUGUCUAGCACCAUUUGAAAUCAGUGUUCUUGGGGG
organism: hsa
comment:
Mourelatos et al. identified two copies of this sequence mapping to chromosome 7, and assigned the names mir-102-7.1 and mir-102-7.2 [1]. Subsequent genome assemblies suggest the presence of only one miR-102 locus on chromosome 7.  Human miR-102 is a homologue of mouse miR-29b (MIR:MI0000143) and so has been renamed here for consistency. 


mirna_acc: MI0000107
mirna_id: hsa-mir-29b-2
previous_mirna_id: hsa-mir-102-1;hsa-mir-29b-1
description: Homo sapiens miR-29b-2 stem-loop
sequence: CUUCUGGAAGCUGGUUUCACAUGGUGGCUUAGAUUUUUCCAUCUUUGUAUCUAGCACCAUUUGAAAUCAGUGUUUUAGGAG
organism: hsa
comment:
This sequence was named mir-102-1 in reference [1].  Human miR-102 is a homologue of mouse miR-29b (MIR:MI0000143) and so has been renamed here for consistency. 


mirna_acc: MI0000111
mirna_id: hsa-mir-105-1
previous_mirna_id: hsa-mir-105-X.1
description: Homo sapiens miR-105-1 stem-loop
sequence: UGUGCAUCGUGGUCAAAUGCUCAGACUCCUGUGGUGGCUGCUCAUGCACCACGGAUGUUUGAGCAUGUGCUACGGUGUCUA
organism: hsa
comment:
Mourelatos et al. [1] reported two identical predicted stem loop sequences located on chromosome X, which they named mir-105-X.1 and mir-105-X.2. These sequences have been renamed mir-105-1 (MIR:MI0000111) and mir-105-2 (MIR:MI0000112) here.  mir-105-2 differs slightly from that published in [1] and deposited in EMBL (EMBL:AF480548).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000113
mirna_id: hsa-mir-106a
previous_mirna_id: hsa-mir-106-X;hsa-mir-106
description: Homo sapiens miR-106a stem-loop
sequence: CCUUGGCCAUGUAAAAGUGCUUACAGUGCAGGUAGCUUUUUGAGAUCUACUGCAAUGUAAGCACUUCUUACAUUACCAUGG
organism: hsa
comment:
This miRNA was not cloned in reference [1], rather it was identified by homology to miR-91 (MIR:MI0000071).  This sequence is localised to chromosome X and was named mir-106-X in [1].  Mouse and human miR-106a (MIR:MI0000406 and MIR:MI0000113) differ at two positions but the precursor sequences are clearly closely related.  The sequences are also related to mir-17 (MIR:MI0000071 and MIR:MI0000687).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000115
mirna_id: hsa-mir-16-2
previous_mirna_id: hsa-mir-16-3
description: Homo sapiens miR-16-2 stem-loop
sequence: GUUCCACUCUAGCAGCACGUAAAUAUUGGCGUAGUGAAAUAUAUAUUAAACACCAAUAUUACUGUGCUGCUUUAGUGUGAC
organism: hsa
comment:
This entry represents a second putative hairpin precursor sequence for miR-16, located on chromosome 3 (see also MIR:MI0000070).  The sequence was previously named mir-16-3 here and in references [1] and [2]. 


mirna_acc: MI0000117
mirna_id: dme-mir-2a-1
description: Drosophila melanogaster miR-2a-1 stem-loop
sequence: GCUGGGCUCUCAAAGUGGUUGUGAAAUGCAUUUCCGCUUUGCGCGGCAUAUCACAGCCAGCUUUGAUGAGCUUAGC
organism: dme
comment:
Stark et al. [2] have identified targets for miR-2 in Drosophila using computational prediction followed by experimental validation.   miR-2 regulates the proapoptotic genes reaper, grim and sickle, suggesting that it may be involved in the control of apoptosis. 


mirna_acc: MI0000127
mirna_id: dme-mir-7
description: Drosophila melanogaster miR-7 stem-loop
sequence: GAGUGCAUUCCGUAUGGAAGACUAGUGAUUUUGUUGUUUGGUCUUUGGUAAUAACAAUAAAUCCCUUGUCUUCUUACGGCGUGCAUUU
organism: dme
comment:
Stark et al. [2] have identified targets for miR-7 in Drosophila using computational prediction followed by experimental validation.   miR-7 regulates a family of Notch targets including the Enhancer of split  and Bearded complex genes Tom and m4, and the basic helix-loop-helix transcriptional repressors HLHm3 and hairy. 


mirna_acc: MI0000129
mirna_id: dme-mir-9a
previous_mirna_id: dme-mir-9
description: Drosophila melanogaster miR-9a stem-loop
sequence: GCUAUGUUGUCUUUGGUUAUCUAGCUGUAUGAGUGAUAAAUAACGUCAUAAAGCUAGCUUACCGAAGUUAAUAUUAGC
organism: dme
comment:
This sequence was named miR-9 in reference [1].  The 5' end has been determined by cloning.  A length distribution of 21-23 nt was reported with 23 nt most commonly expressed.  The sequence maps to chromosome 3L. 


mirna_acc: MI0000130
mirna_id: dme-mir-10
description: Drosophila melanogaster miR-10 stem-loop
sequence: CCACGUCUACCCUGUAGAUCCGAAUUUGUUUUAUACUAGCUUUAAGGACAAAUUCGGUUCUAGAGAGGUUUGUGUGG
organism: dme
comment:
The first cloning experiments identified the mature miR-10 from the 5' arm of the D. melanogaster precursor [1,3].  High-throughput sequencing later showed that the sequence from the 3' arm dominates [4-5]. 


mirna_acc: MI0000137
mirna_id: mmu-let-7g
previous_mirna_id: mmu-let-7gL
description: Mus musculus let-7g stem-loop
sequence: CCAGGCUGAGGUAGUAGUUUGUACAGUUUGAGGGUCUAUGAUACCACCCGGUACAGGAGAUAACUGUACAGGCCACUGCCUUGCCAGG
organism: mmu
comment:
The mature sequence reported in [1] has a 3' terminal A residue, which is incompatible with the reported precursor sequence from [1] and in this entry.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000139
mirna_id: mmu-mir-1a-1
previous_mirna_id: mmu-mir-1d;mmu-mir-1-1
description: Mus musculus miR-1a-1 stem-loop
sequence: GCUUGGGACACAUACUUCUUUAUAUGCCCAUAUGAACCUGCUAAGCUAUGGAAUGUAAAGAAGUAUGUAUUUCAGGC
organism: mmu
comment:
Lagos-Quintana et al. [1] reported the cloning of miR-1b, miR-1c and miR-1d.  The mature processed miR sequences are identical apart from the 3' residues (A in mir-1b, C in mir-1c and UU in mir-1d).  The 3' residues of both miR-1b and miR-1c conflict with the predicted stem-loop precursor sequence shown here and these sequences are not found in current assemblies of human and mouse genomes.  It is suggested that polyA polymerase may add 1-3 nts to the 3' end of the mature transcript (Tom Tuschl, pers. comm.).  The common 21 nts of the 3 reported miR sequences have been rationalised here and named miR-1.  There are 2 pairs of orthologous putative hairpin precursor structures named mir-1-1 (human MIR:MI0000651, mouse MIR:MI0000139), and mir-1-2 (human MIR:MI0000437, mouse MIR:MI0000652).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000146
mirna_id: mmu-mir-99a
description: Mus musculus miR-99a stem-loop
sequence: CAUAAACCCGUAGAUCCGAUCUUGUGGUGAAGUGGACCGCGCAAGCUCGUUUCUAUGGGUCUGUG
organism: mmu
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000147
mirna_id: mmu-mir-99b
description: Mus musculus miR-99b stem-loop
sequence: GGCACCCACCCGUAGAACCGACCUUGCGGGGCCUUCGCCGCACACAAGCUCGUGUCUGUGGGUCCGUGUC
organism: mmu
comment:
Expression of this miRNA in mouse was independently verified in the brain [1], embryonic stem cells [2] and testes [3]. 


mirna_acc: MI0000150
mirna_id: mmu-mir-124-3
previous_mirna_id: mmu-mir-124a;mmu-mir-124a-3
description: Mus musculus miR-124-3 stem-loop
sequence: CUCUGCGUGUUCACAGCGGACCUUGAUUUAAUGUCUAUACAAUUAAGGCACGCGGUGAAUGCCAAGAG
organism: mmu
comment:
miR-124 was cloned from mouse brain [1] and embryonic stem cells [2] by independent groups.  There are 3 predicted precursor hairpin sequences: mir-124-1 (MIR:MI0000716) on chromosome 14, mir-124-2 (MIR:MI0000717) on chromosome 3, and mir-124-3 (previously known as miR-124a here, MIR:MI0000150) on chromosome 2.  All have closely related predicted human homologues (MIR:MI0000443, MIR:MI0000444 and MIR:MI0000445). Lagos-Quintana et al. also report a mature miRNA sequence miR-124b, with a G insertion at position 12 [1].  miR-124b is not found in either the mouse or human genome assemblies. 


mirna_acc: MI0000152
mirna_id: mmu-mir-125b-2
previous_mirna_id: mmu-mir-125b
description: Mus musculus miR-125b-2 stem-loop
sequence: GCCUAGUCCCUGAGACCCUAACUUGUGAGGUAUUUUAGUAACAUCACAAGUCAGGUUCUUGGGACCUAGGC
organism: mmu
comment:
Mouse miR-125b was cloned from mouse brain tissues in [1].  There are 2 predicted hairpin precursor structures in the mouse genome, each has a closely related human homologue [2] (mir-125b-1, MIR:MI0000725; mir-125b-2, MIR:MI0000152; the latter was previously named mir-125b here). 


mirna_acc: MI0000153
mirna_id: mmu-mir-126
description: Mus musculus miR-126 stem-loop
sequence: UGACAGCACAUUAUUACUUUUGGUACGCGCUGUGACACUUCAAACUCGUACCGUGAGUAAUAAUGCGCGGUCA
organism: mmu
comment:
miR-123 identified in [1] was later found to originate from the same precursor as miR-126 and was hence renamed miR-126-5p.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000155
mirna_id: mmu-mir-128-1
previous_mirna_id: mmu-mir-128;mmu-mir-128a
description: Mus musculus miR-128-1 stem-loop
sequence: GUUGGAUUCGGGGCCGUAGCACUGUCUGAGAGGUUUACAUUUCUCACAGUGAACCGGUCUCUUUUUCAGC
organism: mmu
comment:
The most commonly cloned mature sequences derived from the previously annotated mir-128a and mir-128b were shown by Landgraf et al to be identical [3].  The sequences are therefore renamed mir-128-1 and mir-128-2. 


mirna_acc: MI0000156
mirna_id: mmu-mir-130a
previous_mirna_id: mmu-mir-130
description: Mus musculus miR-130a stem-loop
sequence: GAGCUCUUUUCACAUUGUGCUACUGUCUAACGUGUACCGAGCAGUGCAAUGUUAAAAGGGCAUC
organism: mmu
comment:
This sequence was named miR-130 in reference [1], but is renamed here to avoid confusion with miR-130b (MIR:MI0000408). 


mirna_acc: MI0000159
mirna_id: mmu-mir-133a-1
previous_mirna_id: mmu-mir-133
description: Mus musculus miR-133a-1 stem-loop
sequence: GCUAAAGCUGGUAAAAUGGAACCAAAUCGCCUCUUCAAUGGAUUUGGUCCCCUUCAACCAGCUGUAGC
organism: mmu
comment:
This mature miRNA sequence was named miR-133 in reference [1], and renamed miR-133a on subsequent identification of a homologue differing at the terminal 3' position (MIR:MI0000821).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000164
mirna_id: mmu-mir-138-2
previous_mirna_id: mmu-mir-138
description: Mus musculus miR-138-2 stem-loop
sequence: CAGCUGGUGUUGUGAAUCAGGCCGACGAGCAGCGCAUCCUCUUACCCGGCUAUUUCACGACACCAGGGUUG
organism: mmu
comment:
Mouse miR-138 was cloned from mouse brain tissue in [1].  There are 2 predicted hairpin precursor structures in the mouse genome, each has a closely related human homologue [2].  mir-138-1 (MIR:MI0000722) is found on mouse chromosome 8, and mir-138-2 (MIR:MI0000164, previously named mir-138 here) on chromosome 9.  Kim et al. and Obernosterer et al. independently show that the mature product is a 23mer [3,4]. 


mirna_acc: MI0000167
mirna_id: mmu-mir-142
description: Mus musculus miR-142 stem-loop
sequence: ACCCAUAAAGUAGAAAGCACUACUAACAGCACUGGAGGGUGUAGUGUUUCCUACUUUAUGGAUG
organism: mmu
comment:
Expression of miRNAs from both 5' and 3' arms of this precursor have been independently verified in the mouse gut tissue [1] and in embryonic stem cells [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000177
mirna_id: mmu-mir-155
description: Mus musculus miR-155 stem-loop
sequence: CUGUUAAUGCUAAUUGUGAUAGGGGUUUUGGCCUCUGACUGACUCCUACCUGUUAGCAUUAACAG
organism: mmu
comment:
Mouse mir-155 resides in the non-coding BIC transcript (EMBL:AY096003), located on chromosome 16 [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000178
mirna_id: ath-MIR156a
description: Arabidopsis thaliana miR156a stem-loop
organism: ath
sequence:
CAAGAGAAACGCAAAGAAACUGACAGAAGAGAGUGAGCACACAAAGGCAAUUUGCAUAUCAUUGCACUUGCUUCUCUUGCGUGCUCACUGCUCUUUCUGUCAGAUUCCGGUGCUGAUCUCUUU

comment:
MIR156a is found on chromosome 2 in Arabidopsis thaliana [1] and is thought to target 10 mRNAs coding for proteins containing the Squamosa-promoter Binding Protein (SBP) box. The complementary sites are downstream of this conserved domain, within a poorly conserved protein-coding context or the 3' UTR [2]. 


mirna_acc: MI0000179
mirna_id: ath-MIR156b
description: Arabidopsis thaliana miR156b stem-loop
organism: ath
sequence:
GCUAGAAGAGGGAGAGAUGGUGAUUGAGGAAUGCAACAGAGAAAACUGACAGAAGAGAGUGAGCACAUGCAGGCACUGUUAUGUGUCUAUAACUUUGCGUGUGCGUGCUCACCUCUCUUUCUGUCAGUUGCCUAUCUCUGCCUGCUUGACCUCUCUCUCUCUCUCUCUCUCUCAAAUUUGGCU

comment:
MIR156b is found on chromosome 4 in Arabidopsis thaliana [1] and is thought to target 10 mRNAs coding for proteins containing the Squamosa-promoter Binding Protein (SBP) box. The complementary sites are downstream of this conserved domain, within a poorly conserved protein-coding context or the 3' UTR [2]. 


mirna_acc: MI0000180
mirna_id: ath-MIR156c
description: Arabidopsis thaliana miR156c stem-loop
organism: ath
sequence:
CGCAUAGAAACUGACAGAAGAGAGUGAGCACACAAAGGCACUUUGCAUGUUCGAUGCAUUUGCUUCUCUUGCGUGCUCACUGCUCUAUCUGUCAGAUUCCGGCU

comment:
MIR156c is found on chromosome 4 in Arabidopsis thaliana [1] and is thought to target 10 mRNAs coding for proteins containing the Squamosa-promoter Binding Protein (SBP) box. The complementary sites are downstream of this conserved domain, within a poorly conserved protein-coding context or the 3' UTR [2]. 


mirna_acc: MI0000181
mirna_id: ath-MIR156d
description: Arabidopsis thaliana miR156d stem-loop
organism: ath
sequence:
GAUGGGGGAAAAGAAGUUGACAGAAGAGAGUGAGCACACAAAGGGGAAGUUGUAUAAAAGUUUUGUAUAUGGUUGCUUUUGCGUGCUCACUCUCUUUUUGUCAUAACUUCUCCUUCAU

comment:
MIR156d is found on chromosome 5 in Arabidopsis thaliana [1] and is thought to target 10 mRNAs coding for proteins containing the Squamosa-promoter Binding Protein (SBP) box. The complementary sites are downstream of this conserved domain, within a poorly conserved protein-coding context or the 3' UTR [2]. 


mirna_acc: MI0000182
mirna_id: ath-MIR156e
description: Arabidopsis thaliana miR156e stem-loop
organism: ath
sequence:
AGGAGGUGACAGAAGAGAGUGAGCACACAUGGUGGUUUCUUGCAUGCUUUUUUGAUUAGGGUUUCAUGCUUGAAGCUAUGUGUGCUUACUCUCUCUCUGUCACCCCU

comment:
MIR156e is found on chromosome 5 in Arabidopsis thaliana [1] and is thought to target 10 mRNAs coding for proteins containing the Squamosa-promoter Binding Protein (SBP) box. The complementary sites are downstream of this conserved domain, within a poorly conserved protein-coding context or the 3' UTR [2]. 


mirna_acc: MI0000183
mirna_id: ath-MIR156f
description: Arabidopsis thaliana miR156f stem-loop
organism: ath
sequence:
GAGUGGUGAGGAAUUGAUGGUGACAGAAGAGAGUGAGCACACAUGGUGGCUUUCUUGCAUAUUUGAAGGUUCCAUGCUUGAAGCUAUGUGUGCUCACUCUCUAUCCGUCACCCCCUUCUCUCCCUCUCCCUC

comment:
MIR156f is found on chromosome 5 in Arabidopsis thaliana [1] and is thought to target 10 mRNAs coding for proteins containing the Squamosa-promoter Binding Protein (SBP) box. The complementary sites are downstream of this conserved domain, within a poorly conserved protein-coding context or the 3' UTR [2]. 


mirna_acc: MI0000184
mirna_id: ath-MIR157a
description: Arabidopsis thaliana miR157a stem-loop
sequence: GUGUUGACAGAAGAUAGAGAGCACAGAUGAUGAGAUACAAUUCGGAGCAUGUUCUUUGCAUCUUACUCCUUUGUGCUCUCUAGCCUUCUGUCAUCACC
organism: ath
comment:
MIR157a is found on chromosome 1 in Arabidopsis thaliana [1] and is thought, like the miR156 family, to target mRNAs coding for proteins containing the Squamosa-promoter Binding Protein (SBP) box [2]. 


mirna_acc: MI0000185
mirna_id: ath-MIR157b
description: Arabidopsis thaliana miR157b stem-loop
organism: ath
sequence:
UGGGAGGCAUUGAUAGUGUUGACAGAAGAUAGAGAGCACAGAUGAUAAGAUACAAUUCCUCGCAGCUUCUUUGCAUCUUACUCCUUUGUGCUCUCUAGCCUUCUGUCAUCACCCGUUAUUUGCCAUCACCCA

comment:
MIR157b is found on chromosome 1 in Arabidopsis thaliana [1] and is thought, like the miR156 family, to target mRNAs coding for proteins containing the Squamosa-promoter Binding Protein (SBP) box [2]. 


mirna_acc: MI0000186
mirna_id: ath-MIR157c
description: Arabidopsis thaliana miR157c stem-loop
organism: ath
sequence:

comment:
MIR157c is found on chromosome 3 in Arabidopsis thaliana [1] and is thought, like the miR156 family, to target mRNAs coding for proteins containing the Squamosa-promoter Binding Protein (SBP) box [2]. 


mirna_acc: MI0000187
mirna_id: ath-MIR157d
description: Arabidopsis thaliana miR157d stem-loop
organism: ath
sequence:

comment:
MIR157d is found on chromosome 1 in Arabidopsis thaliana [1] and is thought, like the MIR156 family, to target mRNAs coding for proteins containing the Squamosa-promoter Binding Protein (SBP) box [2]. 


mirna_acc: MI0000188
mirna_id: ath-MIR158a
previous_mirna_id: ath-MIR158
description: Arabidopsis thaliana miR158a stem-loop
organism: ath
sequence:
ACACGUCAUCUCUGUGCUUCUUUGUCUACAAUUUUGGAAAAAGUGAUGACGCCAUUGCUCUUUCCCAAAUGUAGACAAAGCAAUACCGUGAUGAUGUCGU

comment:
MIR158 is found on chromosome 3 in Arabidopsis thaliana [1]. The target of this miRNA is unknown [2]. 


mirna_acc: MI0000189
mirna_id: ath-MIR159a
previous_mirna_id: ath-MIR159
description: Arabidopsis thaliana miR159a stem-loop
organism: ath
sequence:
GUAGAGCUCCUUAAAGUUCAAACAUGAGUUGAGCAGGGUAAAGAAAAGCUGCUAAGCUAUGGAUCCCAUAAGCCCUAAUCCUUGUAAAGUAAAAAAGGAUUUGGUUAUAUGGAUUGCAUAUCUCAGGAGCUUUAACUUGCCCUUUAAUGGCUUUUACUCUUCUUUGGAUUGAAGGGAGCUCUAC

comment:
MIR159a was identified independently by Reinhart et al. [1] and Mette et al. [2].  The latter group referred to this sequence by the internal identifier MIR40a.  This sequence is not related to C. elegans miR-40. MIR159a is found on chromosome 1 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for MYB proteins which are known to  bind to the promoter of the floral meristem identity gene LEAFY [3]. 


mirna_acc: MI0000190
mirna_id: ath-MIR160a
description: Arabidopsis thaliana miR160a stem-loop
sequence: GUAUGCCUGGCUCCCUGUAUGCCAUAUGCUGAGCCCAUCGAGUAUCGAUGACCUCCGUGGAUGGCGUAUGAGGAGCCAUGCAUAU
organism: ath
comment:
MIR160a is found on chromosome 2 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for auxin response factor proteins [2]. 


mirna_acc: MI0000191
mirna_id: ath-MIR160b
description: Arabidopsis thaliana miR160b stem-loop
sequence: GUCGUGCCUGGCUCCCUGUAUGCCACAAGAAAACAUCGAUUUAGUUUCAAAAUCGAUCACUAGUGGCGUACAGAGUAGUCAAGCAUGAC
organism: ath
comment:
MIR160b is found on chromosome 4 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for auxin response factor proteins [2]. 


mirna_acc: MI0000192
mirna_id: ath-MIR160c
description: Arabidopsis thaliana miR160c stem-loop
sequence: GUUAUGCCUGGCUCCCUGUAUGCCACGAGUGGAUACCGAUUUUGGUUUUAAAAUCGGCUGCCGGUGGCGUACAAGGAGUCAAGCAUGAC
organism: ath
comment:
MIR160c is found on chromosome 5 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for auxin response factor proteins [2]. 


mirna_acc: MI0000193
mirna_id: ath-MIR161
description: Arabidopsis thaliana miR161 stem-loop
organism: ath
sequence:
UGCUUGAUCUCGGUUUUUGACCAGUUUAUUGCGUCGAUCAAUGCAUUGAAAGUGACUACAUCGGGGUUCCGAUUUUUUUUGUUCUUCAUAUGAUGAAGCGGAAACAGUAAUCAACCCUGGUUUAGUCACUUUCACUGCAUUAAUCAAUGCAUUUGUAAAAAGAGGGAAAAGCA

comment:
MIR161 is found on chromosome 1 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for PPR repeat proteins [2]. 


mirna_acc: MI0000194
mirna_id: ath-MIR162a
description: Arabidopsis thaliana miR162a stem-loop
comment: MIR162a is found on chromosome 5 in Arabidopsis thaliana [1] and its target is unknown.
organism: ath
sequence:
UAGUUGGAAGAAGAGUGAGAGUCGCUGGAGGCAGCGGUUCAUCGAUCUCUUCCUGUGAACACAUUAAAAAUGUAAAAGCAUGAAUAGAUCGAUAAACCUCUGCAUCCAGCGUUUGCCUCUUGUAUCUUUCUUAUUGACUU


mirna_acc: MI0000195
mirna_id: ath-MIR162b
description: Arabidopsis thaliana miR162b stem-loop
comment: MIR162b is found on chromosome 5 in Arabidopsis thaliana [1] and its target is unknown.
organism: ath
sequence:
GAGUGAAGUCGCUGGAGGCAGCGGUUCAUCGAUCAAUUCCUGUGAAUAUUUAUUUUUGUUUACAAAAGCAAGAAUCGAUCGAUAAACCUCUGCAUCCAGCGCUGCUUGCUC


mirna_acc: MI0000196
mirna_id: ath-MIR163
description: Arabidopsis thaliana miR163 stem-loop
comment: MIR163 is found on chromosome 1 in Arabidopsis thaliana [1] and its target is unknown.
organism: ath
sequence:


mirna_acc: MI0000197
mirna_id: ath-MIR164a
description: Arabidopsis thaliana miR164a stem-loop
organism: ath
sequence:
GGGUGAGAAUCUCCAUGUUGGAGAAGCAGGGCACGUGCAAACCAACAAACACGAAAUCCGUCUCAUUUGCUUAUUUGCACGUACUUAACUUCUCCAACAUGAGCUCUUCACCC

comment:
MIR164a is found on chromosome 2 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for NAC domain containing proteins such as Cup-Shaped Cotyledon 2 (CUC2) which is required for shoot apical meristem formation [2]. 


mirna_acc: MI0000198
mirna_id: ath-MIR164b
description: Arabidopsis thaliana miR164b stem-loop
organism: ath
sequence:
GAUGGAGAAGCAGGGCACGUGCAUUACUAGCUCAUAUAUACACUCUCACCACAAAUGCGUGUAUAUAUGCGGAAUUUUGUGAUAUAGAUGUGUGUGUGUGUUGAGUGUGAUGAUAUGGAUGAGUUAGUUCUUCAUGUGCCCAUCUUCACCAUC

comment:
MIR164b is found on chromosome 5 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for NAC domain containing proteins such as Cup-Shaped Cotyledon 2 (CUC2) which is required for shoot apical meristem formation [2]. 


mirna_acc: MI0000199
mirna_id: ath-MIR165a
description: Arabidopsis thaliana miR165a stem-loop
organism: ath
sequence:
GUUGAGGGGAAUGUUGUCUGGAUCGAGGAUAUUAUAGAUAUAUACAUGUGUAUGUUAAUGAUUCAAGUGAUCAUAGAGAGUAUCCUCGGACCAGGCUUCAUCCCCCCCAAC

comment:
MIR165a is found on chromosome 1 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2]. 


mirna_acc: MI0000200
mirna_id: ath-MIR165b
description: Arabidopsis thaliana miR165b stem-loop
organism: ath
sequence:
UGAAGAGGCUAUUUCUGUUGUGGGGAAUGUUGUUUGGAUCGAGGAUAUCAUAAACGCAUACACAUGUUUAUAUGUUAUGAUGCAUUAUAUGACUGAUGUAAUGUACAUAUAUAUACAUACAUGCCACAUGGUAUCGUCGGACCAGGCUUCAUCCCCCUCAACAUGUUAAUUGCCUUCAAUCA

comment:
MIR165b is found on chromosome 4 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2]. 


mirna_acc: MI0000201
mirna_id: ath-MIR166a
description: Arabidopsis thaliana miR166a stem-loop
organism: ath
sequence:
AGGGGCUUUCUCUUUUGAGGGGACUGUUGUCUGGCUCGAGGACUCUGGCUCGCUCUAUUCAUGUUGGAUCUCUUUCGAUCUAACAAUCGAAUUGAACCUUCAGAUUUCAGAUUUGAUUAGGGUUUUAGCGUCUUCGGACCAGGCUUCAUUCCCCCCAAUUGUUGCUCCCU

comment:
MIR166a is found on chromosome 2 in Arabidopsis thaliana [1] and, like miR165, is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2]. 


mirna_acc: MI0000202
mirna_id: ath-MIR166b
description: Arabidopsis thaliana miR166b stem-loop
organism: ath
sequence:
UUGAGGGGACUGUUGUCUGGCUCGAGGACUCUUAUUCUAAUACAAUCUCAUUUGAAUACAUUCAGAUCUGAUGAUUGAUUAGGGUUUUAGUGUCGUCGGACCAGGCUUCAUUCCCCCCAA

comment:
MIR166b is found on chromosome 3 in Arabidopsis thaliana [1] and, like miR165, is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2]. 


mirna_acc: MI0000203
mirna_id: ath-MIR166c
description: Arabidopsis thaliana miR166c stem-loop
organism: ath
sequence:
GCGAUUUAGUGUUGAGAGGAUUGUUGUCUGGCUCGAGGUCAUGAAGAAGAGAAUCACUCGAAUUAAUUUGGAAGAACAAAUUAAGAAAACCCUAGAUGAUUCUCGGACCAGGCUUCAUUCCCCCUAACCUACUUAUCGC

comment:
MIR166c is found on chromosome 5 in Arabidopsis thaliana [1] and, like miR165, is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2]. 


mirna_acc: MI0000204
mirna_id: ath-MIR166d
description: Arabidopsis thaliana miR166d stem-loop
organism: ath
sequence:
GGUUGAGAGGAAUAUUGUCUGGCUCGAGGUCAUGAAGAAGAUCGGUAGAUUGAUUCAUUUUAAAGAGUGAAAUCCCUAAAUGAUUCUCGGACCAGGCUUCAUUCCCCCCAACC

comment:
MIR166d is found on chromosome 5 in Arabidopsis thaliana [1] and, like miR165, is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2]. 


mirna_acc: MI0000205
mirna_id: ath-MIR166e
description: Arabidopsis thaliana miR166e stem-loop
organism: ath
sequence:
UUGAGGGGAAUGUUGUCUGGCACGAGGCCCUUAACUUAGAUCUAUAUUUGAUUAUAUAUAUAUGUCUCUUCUUUAUUCAUUAGUCUAUACAUGAAUGAUCAUUUUACGGUUAAUGACGUCGGACCAGGCUUCAUUCCCCUCAA

comment:
MIR166e is found on chromosome 5 in Arabidopsis thaliana [1] and, like miR165, is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2]. 


mirna_acc: MI0000206
mirna_id: ath-MIR166f
description: Arabidopsis thaliana miR166f stem-loop
organism: ath
sequence:
AAGUUCAGGUGAAUGAUGCCUGGCUCGAGACCAUUCAAUCUCAUGAUCUCAUGAUUAUAACGAUGAUGAUGAUGAUGUCGGACCAGGCUUCAUUCCCCUCAACUU

comment:
MIR166f is found on chromosome 5 in Arabidopsis thaliana [1] and, like miR165, is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2]. 


mirna_acc: MI0000207
mirna_id: ath-MIR166g
description: Arabidopsis thaliana miR166g stem-loop
organism: ath
sequence:
GCGAUUUAGGGUUUAGAGGAAUGUUGUUUGGCUCGAGGUCAUGGAGAGUAAUUCGUUAACCCAACUCAAAACUCUAAAUGAUUCUCGGACCAGGCUUCAUUCCCCUCAACCUAUUUUAUCGC

comment:
MIR166g is found on chromosome 5 in Arabidopsis thaliana [1] and, like miR165, is thought to target mRNAs coding for HD-Zip transcription factors including Phabulosa (PHB) and Phavoluta (PHV) that regulate axillary meristem initiation and leaf development [2]. 


mirna_acc: MI0000208
mirna_id: ath-MIR167a
description: Arabidopsis thaliana miR167a stem-loop
organism: ath
sequence:
UGGUGCACCGGCAUCUGAUGAAGCUGCCAGCAUGAUCUAAUUAGCUUUCUUUAUCCUUUGUUGUGUUUCAUGACGAUGGUUAAGAGAUCAGUCUCGAUUAGAUCAUGUUCGCAGUUUCACCCGUUGACUGUCGCACCC

comment:
MIR167a is found on chromosome 3 in Arabidopsis thaliana [1] and is thought, like miR160, to target mRNAs coding for auxin response factors, DNA binding proteins that are thought to control transcription in response to the phytohormone auxin. Transcriptional regulation is important for many of the diverse developmental responses to auxin signals, which include cell elongation, division, and differentiation in both roots and shoots [2]. 


mirna_acc: MI0000209
mirna_id: ath-MIR167b
description: Arabidopsis thaliana miR167b stem-loop
organism: ath
sequence:
GGGAACAAGUGAAGCUGCCAGCAUGAUCUAUCUUUGGUUAAGAGAUGAAUGUGGAAACAUAUUGCUUAAACCCAAGCUAGGUCAUGCUCUGACAGCCUCACUCCUUCCU

comment:
MIR167b is found on chromosome 3 in Arabidopsis thaliana [1] and is thought, like miR160, to target mRNAs coding for auxin response factors, DNA binding proteins that are thought to control transcription in response to the phytohormone auxin. Transcriptional regulation is important for many of the diverse developmental responses to auxin signals, which include cell elongation, division, and differentiation in both roots and shoots [2]. 


mirna_acc: MI0000210
mirna_id: ath-MIR168a
description: Arabidopsis thaliana miR168a stem-loop
organism: ath
sequence:
CACCAUCGGGCUCGGAUUCGCUUGGUGCAGGUCGGGAACCAAUUCGGCUGACACAGCCUCGUGACUUUUAAACCUUUAUUGGUUUGUGAGCAGGGAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAUCCUCGAGGUG

comment:
MIR168a is found on chromosome 4 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for Argonaute (AGO1), which is required for axillary shoot meristem formation and leaf development in Arabidopsis. It has been suggested that AGO1 may also influence miRNA accumulation in plants and that miR168 may act as a negative-feedback mechanism for controlling expression of the AGO1 gene [2]. 


mirna_acc: MI0000211
mirna_id: ath-MIR168b
description: Arabidopsis thaliana miR168b stem-loop
organism: ath
sequence:
UUACCGGCGGUCUCGGAUUCGCUUGGUGCAGGUCGGGAACUGAUUGGCUGACACCGACACGUGUCUUGUCAUGGUUGGUUUGUGAGCUCCCGUCUUGUAUCAACUGAAUCGGAGUCCGAGGUGA

comment:
MIR168b is found on chromosome 5 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for Argonaute (AGO1), which is required for axillary shoot meristem formation and leaf development in Arabidopsis. It has been suggested that AGO1 may also influence miRNA accumulation in plants and that miR168 may act as a negative-feedback mechanism for controlling expression of the AGO1 gene [2]. 


mirna_acc: MI0000212
mirna_id: ath-MIR169a
previous_mirna_id: ath-MIR169
description: Arabidopsis thaliana miR169a stem-loop
organism: ath
sequence:

comment:
MIR169 is found on chromosome 3 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for CCAAT binding factor (CBF)-HAP2-like proteins [2]. 


mirna_acc: MI0000213
mirna_id: ath-MIR170
description: Arabidopsis thaliana miR170 stem-loop
sequence: CGAGAGAGUCCCUCUGAUAUUGGCCUGGUUCACUCAGAUUCUCUUUUACUAACUCAUCUGAUUGAGCCGUGUCAAUAUCUCAGUCCUCUCUCG
organism: ath
comment:
MIR170 is found on chromosome 5 in Arabidopsis thaliana [1] and is thought to target mRNAs coding for GRAS domain or SCARECROW-like proteins, a family of transcription factors whose members have been implicated in radial patterning in roots, signaling by the phytohormone gibberellin, and light signaling [2]. 


mirna_acc: MI0000214
mirna_id: ath-MIR171a
previous_mirna_id: ath-MIR171
description: Arabidopsis thaliana miR171a stem-loop
organism: ath
sequence:
AUGAGAGAGUCCCUUUGAUAUUGGCCUGGUUCACUCAGAUCUUACCUGACCACACACGUAGAUAUACAUUAUUCUCUCUAGAUUAUCUGAUUGAGCCGCGCCAAUAUCUCAGUACUCUCUCGU

comment:
MIR171 is found on chromosomes 2, 3 and 4 in Arabidopsis thaliana [1] and is thought, like miR170, to target mRNAs coding for GRAS domain or SCARECROW-like proteins, a family of transcription factors whose members have been implicated in radial patterning in roots, signaling by the phytohormone gibberellin, and light signaling [2]. 


mirna_acc: MI0000215
mirna_id: ath-MIR172a
previous_mirna_id: ath-MIR172a1
description: Arabidopsis thaliana miR172a stem-loop
organism: ath
sequence:
UGCUGUGGCAUCAUCAAGAUUCACAUCUGUUGAUGGACGGUGGUGAUUCACUCUCCACAAAGUUCUCUAUGAAAAUGAGAAUCUUGAUGAUGCUGCAUCGGC

comment:
This sequence was independently identified by two groups.  Park et al. described miR172a1, found on chromosome 2 in Arabidopsis thaliana and thought to target mRNAs coding for Apetala 2 (AP2) proteins, and miR172a2 (MIR:MI0000216) [1].  These sequences have been renamed miR172a and miR172b here to match previous plant miRNA nomenclature.  This sequence was referred to by Mette et al. by the internal identifier MIR123a [2], and was previously identified as MIR180a here.  This sequence is not related to mouse miR-123. 


mirna_acc: MI0000216
mirna_id: ath-MIR172b
previous_mirna_id: ath-MIR172a2
description: Arabidopsis thaliana miR172b stem-loop
sequence: AGGCGCAGCACCAUUAAGAUUCACAUGGAAAUUGAUAAAUACCCUAAAUUAGGGUUUUGAUAUGUAUAUGAGAAUCUUGAUGAUGCUGCAUCAAC
organism: ath
comment:
This sequence was independently identified by two groups.  Park et al. described miR172a2, found on chromosome 5 in Arabidopsis thaliana and thought to target mRNAs coding for Apetala 2 (AP2) proteins, and miR172a1 (MIR:MI0000215) [1].  These sequences have been renamed miR172b and miR172a here to match previous plant miRNA nomenclature.  This sequence was referred to by Mette et al. by the internal identifier MIR123b [2], and was previously identified as MIR180b here.  This sequence is not related to mouse miR-123.  Wang et al. [2] report Northern blot evidence for the miR172b* sequence from the opposite arm of the precursor. 


mirna_acc: MI0000217
mirna_id: ath-MIR173
description: Arabidopsis thaliana miR173 stem-loop
organism: ath
sequence:
UAAGUACUUUCGCUUGCAGAGAGAAAUCACAGUGGUCAAAAAAGUUGUAGUUUUCUUAAAGUCUCUUUCCUCUGUGAUUCUCUGUGUAAGCGAAAGAGCUUG

comment:
MIR173 is found on chromosome 3 in Arabidopsis thaliana and is thought to target mRNAs coding for a protein of unknown function (At3g28460) [1]. 


mirna_acc: MI0000218
mirna_id: ath-MIR159b
description: Arabidopsis thaliana miR159b stem-loop
organism: ath
sequence:
GGAAGAGCUCCUUGAAGUUCAAUGGAGGGUUUAGCAGGGUGAAGUAAAGCUGCUAAGCUAUGGAUCCCAUAAGCCUUAUCAAAUUCAAUAUAAUUGAUGAUAAGGUUUUUUUUAUGGAUGCCAUAUCUCAGGAGCUUUCACUUACCCCUUUAAUGGCUUCACUCUUCUUUGGAUUGAAGGGAGCUCUUCAUCUCUC

comment:
Reference [1] described the discovery of MIR159b, but referred to the sequence by the internal identifier MIR40b.  This sequence is not related to C. elegans miR-40.  MIR159b is found on chromosome 1 in Arabidopsis thaliana [2] and is thought to target mRNAs coding for MYB proteins which are known to bind to the promoter of the floral meristem identity gene LEAFY [3]. 


mirna_acc: MI0000221
mirna_id: mmu-mir-10b
description: Mus musculus miR-10b stem-loop
sequence: UAUAUACCCUGUAGAACCGAAUUUGUGUGGUACCCACAUAGUCACAGAUUCGAUUCUAGGGGAAUAUA
organism: mmu
comment:
The sequence of mouse miR-10b, as reported by Lagos-Quintana et al. [1], is offset by 2 nt in the 3' direction with respect to sequences cloned from human (MIR:MI0000267) and zebrafish (MIR:MI0001364).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000223
mirna_id: mmu-mir-181a-2
previous_mirna_id: mmu-mir-181;mmu-mir-181a
description: Mus musculus miR-181a-2 stem-loop
sequence: CCAUGGAACAUUCAACGCUGUCGGUGAGUUUGGGAUUCAAAAACAAAAAAACCACCGACCGUUGACUGUACCUUGG
organism: mmu
comment:
Mouse miR-181a (previously named miR-181 here and in [1]) was cloned from various mouse tissues in [1].  Expression has also been validated in zebrafish [2]. 


mirna_acc: MI0000234
mirna_id: hsa-mir-192
description: Homo sapiens miR-192 stem-loop
organism: hsa
sequence:
GCCGAGACCGAGUGCACAGGGCUCUGACCUAUGAAUUGACAGCCAGUGCUCUCGUCUCCCCUCUGGCUGCCAAUUCCAUAGGUCACAGGUAUGUUCGCCUCAAUGCCAGC

comment:
Lagos-Quintana et al. validated the presence of an 18 nt excised sequence by cloning [1].  Lim et al. predicted the miR by computational methods using conservation with mouse and Fugu rubripes sequences.  Expression of the excised miR was validated in zebrafish, and the 5' end mapped by PCR [2].  The 3' ends of the reported sequences differ by 3 nt - this entry contains the longer sequence.  Lim et al. report three separate copies of this gene named mir-192-1, -2 and -3 based on 2001 human genome assemblies [2]. Subsequent assemblies suggest the presence of only one gene located on chromosome 11. 


mirna_acc: MI0000236
mirna_id: mmu-mir-194-1
previous_mirna_id: mmu-mir-194
description: Mus musculus miR-194-1 stem-loop
sequence: AUCGGGUGUAACAGCAACUCCAUGUGGACUGUGCUCGGAUUCCAGUGGAGCUGCUGUUACUUCUGAU
organism: mmu
comment:
Lagos-Quintana cloned miR-194 from mouse kidney tissue [1].  Michael et al. subsequently verified expression of miR-194 in human [2].  Two putative pairs of orthologous hairpin precursors structures are found in mouse  (mir-194-1 (MIR:MI0000236) on chromosome 1, and mir-194-2 (MIR:MI0000733) on chromosome 19) and human (mir-194-1 (MIR:MI0000488) on chromosome 1, and mir-194-2 (MIR:MI0000732) on chromosome 11). 


mirna_acc: MI0000238
mirna_id: hsa-mir-196a-1
previous_mirna_id: hsa-mir-196;hsa-mir-196-1
description: Homo sapiens miR-196a-1 stem-loop
sequence: GUGAAUUAGGUAGUUUCAUGUUGUUGGGCCUGGGUUUCUGAACACAACAACAUUAAACCACCCGAUUCAC
organism: hsa
comment:
Lagos-Quintana et al. [1] cloned this miRNA from human osteoblast sarcoma cells.  Lim et al [2] independently predicted this miRNA by computational methods using conservation with mouse and Fugu rubripes sequences [2]. Expression of the excised miR was validated in zebrafish.  The sequence maps to human chromosome 17.  Yekta et al. report that miR-196 miRNAs are expressed from HOX gene clusters in mammals, and that HOX genes in these clusters are targets of miR-196.  Indeed, HOXB8 mRNA was shown to be a natural target for miR-196-directed cleavage through a perfectly complementary miR-target site.  Other HOX genes have imperfect miR-196 complementary sites indicative of regulation by translational repression [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000241
mirna_id: mmu-mir-199a-1
previous_mirna_id: mmu-mir-199-as;mmu-mir-199
description: Mus musculus miR-199a-1 stem-loop
sequence: GCCAUCCCAGUGUUCAGACUACCUGUUCAGGAGGCUGGGACAUGUACAGUAGUCUGCACAUUGGUUAGGC
organism: mmu
comment:
The hairpin precursor sequence mir-199 maps to two loci within 50 kb on mouse chromosome 9.  This sequence was named mir-199 in [1] and [2], but is renamed here to avoid overlap with the predicted homologues of human mir-199a-2 and mir-199b.  Landgraf et al. demonstrate comparable expression for products from both arms of the hairpin, which are therefore renamed miR-199a-5p and miR-199a-3p here [4].  The mature sequences shown here represent the most commonly cloned forms from large-scale cloning studies [4].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000242
mirna_id: hsa-mir-199a-1
previous_mirna_id: hsa-mir-199-s
description: Homo sapiens miR-199a-1 stem-loop
sequence: GCCAACCCAGUGUUCAGACUACCUGUUCAGGAGGCUCUCAAUGUGUACAGUAGUCUGCACAUUGGUUAGGC
organism: hsa
comment:
Lagos-Quintana et al. [1] cloned miR-199 from human osteoblast sarcoma cells.  They also reported identification of a miRNA from the opposite arm in mouse cells.  This sequence was named miR-199-s and the sequence from the 3' arm of the homologous mouse precursor miR-199-as.  Lim et al. [2] independently predicted this miRNA computationally using conservation with mouse and Fugu rubripes sequences [2].  Expression of the miR excised from the 5' arm was validated in zebrafish, and the ends mapped by cloning. The excised miR sequences are renamed miR-199a (to avoid confusion with the subsequently identified miR-199b (MIR:MI0000282)) and miR-199a* (from the 3' arm) here.  The two putative hairpin precursors in human map to chromosome 19 (mir-199a-1, MIR:MI0000242) and chromosome 1 (mir-199a-2, MIR:MI0000281).  Landgraf et al. show that both mature products are expressed, prompting the renaming to miR-199a-5p and miR-199a-3p [4]. 


mirna_acc: MI0000252
mirna_id: hsa-mir-129-1
previous_mirna_id: hsa-mir-129;hsa-mir-129a
description: Homo sapiens miR-129-1 stem-loop
sequence: GGAUCUUUUUGCGGUCUGGGCUUGCUGUUCCUCUCAACAGUAGUCAGGAAGCCCUUACCCCAAAAAGUAUCU
organism: hsa
comment:
This miRNA sequence was predicted based on homology to a verified miRNA cloned from mouse cerebellum [1].  Expression of this miRNA was subsequently verified in a human osteoblast sarcoma cell line [2]. Reference [2] named the human/mouse conserved sequence miR-129b, but subsequent genome searches suggest that the same mature sequence may be expressed from two predicted hairpin precursors in both human (this entry and MIR:MI0000473) and mouse (MIR:MI0000222 and MIR:MI0000585).  Landgraf et al. show that the 5' product of mir-129-1 (this entry) is the predominant one, whereas both 5' and 3' products are significantly expressed from mir-129-2 (MIR:MI0000585) [3]. 


mirna_acc: MI0000254
mirna_id: hsa-mir-30c-2
previous_mirna_id: hsa-mir-30c
description: Homo sapiens miR-30c-2 stem-loop
sequence: AGAUACUGUAAACAUCCUACACUCUCAGCUGUGGAAAGUAAGAAAGCUGGGAGAAGGCUGUUUACUCUUUCU
organism: hsa
comment:
miR-30c was cloned from mouse heart and brain tissues by Lagos-Quintana et al. [1].  Two human hairpin precursor sequences are predicted based on homology with the mouse sequences, on chromosomes 1 (MIR:MI0000736) and 6 (MIR:MI0000254) [3].  Expression of miR-30c was later independently verified in human HL-60 leukemia cells [2]. 


mirna_acc: MI0000257
mirna_id: mmu-mir-143
description: Mus musculus miR-143 stem-loop
sequence: CCUGAGGUGCAGUGCUGCAUCUCUGGUCAGUUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGG
organism: mmu
comment:
Expression of this miRNA in mouse was independently verified in heart and brain [1], embryonic stem cells [2] and testes [3].  The predominant miRNA cloned by Langraf et al. has a 3' terminal U residue, which is incompatible with the genome sequence [4]. 


mirna_acc: MI0000259
mirna_id: mmu-mir-30e
description: Mus musculus miR-30e stem-loop
sequence: GGGCAGUCUUUGCUACUGUAAACAUCCUUGACUGGAAGCUGUAAGGUGUUGAGAGGAGCUUUCAGUCGGAUGUUUACAGCGGCAGGCUGCCA
organism: mmu
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5]. 


mirna_acc: MI0000262
mirna_id: hsa-mir-147a
previous_mirna_id: hsa-mir-147
description: Homo sapiens miR-147a stem-loop
sequence: AAUCUAAAGACAACAUUUCUGCACACACACCAGACUAUGGAAGCCAGUGUGUGGAAAUGCUUCUGCUAGAUU
organism: hsa
comment:
Lagos-Quintana et al. cloned miR-147 from mouse spleen tissue [1], but the sequence is not present in the mouse genome assembly (NCBI32).  The human genome sequence contains a predicted precursor hairpin for miR-147 shown in [1] (supplementary information) and represented here.  The expression of miR-147 has not been verified in human. 


mirna_acc: MI0000263
mirna_id: hsa-mir-7-1
description: Homo sapiens miR-7-1 stem-loop
organism: hsa
sequence:
UUGGAUGUUGGCCUAGUUCUGUGUGGAAGACUAGUGAUUUUGUUGUUUUUAGAUAACUAAAUCGACAACAAAUCACAGUCUGCCAUAUGGCACAGGCCAUGCCUCUACAG

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR.  Landgraf et al. confirm expression in human [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000264
mirna_id: hsa-mir-7-2
description: Homo sapiens miR-7-2 stem-loop
organism: hsa
sequence:
CUGGAUACAGAGUGGACCGGCUGGCCCCAUCUGGAAGACUAGUGAUUUUGUUGUUGUCUUACUGCGCUCAACAACAAAUCCCAGUCUACCUAAUGGUGCCAGCCAUCGCA

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR.  Landgraf et al. confirm expression in human [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000265
mirna_id: hsa-mir-7-3
description: Homo sapiens miR-7-3 stem-loop
organism: hsa
sequence:
AGAUUAGAGUGGCUGUGGUCUAGUGCUGUGUGGAAGACUAGUGAUUUUGUUGUUCUGAUGUACUACGACAACAAGUCACAGCCGGCCUCAUAGCGCAGACUCCCUUCGAC

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR.  Expression in human was later verified by cloning [1,2]. 


mirna_acc: MI0000266
mirna_id: hsa-mir-10a
description: Homo sapiens miR-10a stem-loop
organism: hsa
sequence:
GAUCUGUCUGUCUUCUGUAUAUACCCUGUAGAUCCGAAUUUGUGUAAGGAAUUUUGUGGUCACAAAUUCGUAUCUAGGGGAAUAUGUAGUUGACAUAAACACUCCGCUCU

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  Mature products were later verified in human [2]. 


mirna_acc: MI0000267
mirna_id: hsa-mir-10b
description: Homo sapiens miR-10b stem-loop
organism: hsa
sequence:
CCAGAGGUUGUAACGUUGUCUAUAUAUACCCUGUAGAACCGAAUUUGUGUGGUAUCCGUAUAGUCACAGAUUCGAUUCUAGGGGAAUAUAUGGUCGAUGCAAAAACUUCA

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  Michael et al. subsequently verified expression of miR-10b in human [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000268
mirna_id: hsa-mir-34a
previous_mirna_id: hsa-mir-34
description: Homo sapiens miR-34a stem-loop
organism: hsa
sequence:
GGCCAGCUGUGAGUGUUUCUUUGGCAGUGUCUUAGCUGGUUGUUGUGAGCAAUAGUAAGGAAGCAAUCAGCAAGUAUACUGCCCUAGAAGUGCUGCACGUUGUGGGGCCC

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.   Dostie et al. independently cloned this sequence in human but misnamed the sequence miR-172 (the sequence is unrelated to MIR172 from Arabidopsis) [2].  The sequence maps to human chromosome 1.  Human miR-34a was previously named miR-34 here and in [1], but is renamed to clarify homology with the alternatively named mouse sequence (MIR:MI0000584).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000269
mirna_id: hsa-mir-181a-2
previous_mirna_id: hsa-mir-181a
description: Homo sapiens miR-181a-2 stem-loop
organism: hsa
sequence:
AGAAGGGCUAUCAGGCCAGCCUUCAGAGGACUCCAAGGAACAUUCAACGCUGUCGGUGAGUUUGGGAUUUGAAAAAACCACUGACCGUUGACUGUACCUUGGGGUCCUUA

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  Landgraf et al. and Lui et al. later verify expression in human [4-5]. 


mirna_acc: MI0000270
mirna_id: hsa-mir-181b-1
previous_mirna_id: hsa-mir-181b
description: Homo sapiens miR-181b-1 stem-loop
organism: hsa
sequence:
CCUGUGCAGAGAUUAUUUUUUAAAAGGUCACAAUCAACAUUCAUUGCUGUCGGUGGGUUGAACUGUGUGGACAAGCUCACUGAACAAUGAAUGCAACUGUGGCCCCGCUU

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  Its expression was later verified in human BC-1 cells [3].  There are two predicted hairpin precursor sequences in the human genome; mir-181b-1 (MIR:MI0000270) is found on chromosome 1 [1], and mir-181b-2 (MIR:MI0000683) on chromosome 9 [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000271
mirna_id: hsa-mir-181c
description: Homo sapiens miR-181c stem-loop
organism: hsa
sequence:
CGGAAAAUUUGCCAAGGGUUUGGGGGAACAUUCAACCUGUCGGUGAGUUUGGGCAGCUCAGGCAAACCAUCGACCGUUGAGUGGACCCUGAGGCCUGGAAUUGCCAUCCU

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  Landgraf et al. confirm the expression of miR-181c in human [2]. 


mirna_acc: MI0000272
mirna_id: hsa-mir-182
previous_mirna_id: hsa-mir-182-as
description: Homo sapiens miR-182 stem-loop
organism: hsa
sequence:
GAGCUGCUUGCCUCCCCCCGUUUUUGGCAAUGGUAGAACUCACACUGGUGAGGUAACAGGAUCCGGUGGUUCUAGACUUGCCAACUAUGGGGCGAGGACUCAGCCGGCAC


mirna_acc: MI0000273
mirna_id: hsa-mir-183
description: Homo sapiens miR-183 stem-loop
organism: hsa
sequence:
CCGCAGAGUGUGACUCCUGUUCUGUGUAUGGCACUGGUAGAAUUCACUGUGAACAGUCUCAGUCAGUGAAUUACCGAAGGGCCAUAAACAGAGCAGAGACAGAUCCACGA

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR.  Expression was later confirmed in human [2,3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000274
mirna_id: hsa-mir-187
description: Homo sapiens miR-187 stem-loop
organism: hsa
sequence:
GGUCGGGCUCACCAUGACACAGUGUGAGACCUCGGGCUACAACACAGGACCCGGGCGCUGCUCUGACCCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCAGGUCCGCA

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR.  Landgraf et al. confirm expression in human [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000279
mirna_id: hsa-mir-196a-2
previous_mirna_id: hsa-mir-196-2
description: Homo sapiens miR-196a-2 stem-loop
organism: hsa
sequence:
UGCUCGCUCAGCUGAUCUGUGGCUUAGGUAGUUUCAUGUUGUUGGGAUUGAGUUUUGAACUCGGCAACAAGAAACUGCCUGAGUUACAUCAGUCGGUUUUCGUCGAGGGC

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  miR-196a was later validated in human [3,4]. Yekta et al. report that miR-196 miRNAs are expressed from HOX gene clusters in mammals, and that HOX genes in these clusters are targets of miR-196.  Indeed, HOXB8 mRNA was shown to be a natural target for miR-196-directed cleavage through a perfectly complementary miR-target site.  Other HOX genes have imperfect miR-196 complementary sites indicative of regulation by translational repression [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000281
mirna_id: hsa-mir-199a-2
description: Homo sapiens miR-199a-2 stem-loop
organism: hsa
sequence:
AGGAAGCUUCUGGAGAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGGAGAGCA

comment:
Lagos-Quintana et al. [1] cloned miR-199 from human osteoblast sarcoma cells.  They also reported identification of a miRNA from the opposite arm in mouse cells.  This sequence was named miR-199-s and the sequence from the 3' arm of the homologous mouse precursor miR-199-as.  Lim et al. [2] independently predicted this miRNA computationally using conservation with mouse and Fugu rubripes sequences [2].  Expression of the miR excised from the 5' arm was validated in zebrafish, and the ends mapped by cloning. The excised miR sequences are renamed miR-199a (to avoid confusion with the subsequently identified miR-199b (MIR:MI0000282)) and miR-199a* (from the 3' arm) here.  The two putative hairpin precursors in human map to chromosome 19 (mir-199a-1, MIR:MI0000242) and chromosome 1 (mir-199a-2, MIR:MI0000281).  Landgraf et al. show that both mature products are expressed, prompting the renaming to miR-199a-5p and miR-199a-3p [4]. 


mirna_acc: MI0000282
mirna_id: hsa-mir-199b
description: Homo sapiens miR-199b stem-loop
organism: hsa
sequence:
CCAGAGGACACCUCCACUCCGUCUACCCAGUGUUUAGACUAUCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGUUAGACCCUCGG

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised 5' miR has been validated in zebrafish, the ends mapped by cloning [2], and later verified in human [3]. 


mirna_acc: MI0000283
mirna_id: hsa-mir-203a
previous_mirna_id: hsa-mir-203
description: Homo sapiens miR-203a stem-loop
organism: hsa
sequence:
GUGUUGGGGACUCGCGCGCUGGGUCCAGUGGUUCUUAACAGUUCAACAGUUCUGUAGCGCAAUUGUGAAAUGUUUAGGACCACUAGACCCGGCGGGCGCGGCGACAGCGA

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  Landgraf et al. confirm expression in human [2]. 


mirna_acc: MI0000284
mirna_id: hsa-mir-204
description: Homo sapiens miR-204 stem-loop
organism: hsa
sequence:
GGCUACAGUCUUUCUUCAUGUGACUCGUGGACUUCCCUUUGUCAUCCUAUGCCUGAGAAUAUAUGAAGGAGGCUGGGAAGGCAAAGGGACGUUCAAUUGUCAUCACUGGC

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  Landgraf et al. confirm expression in human [2]. 


mirna_acc: MI0000285
mirna_id: hsa-mir-205
description: Homo sapiens miR-205 stem-loop
organism: hsa
sequence:
AAAGAUCCUCAGACAAUCCAUGUGCUUCUCUUGUCCUUCAUUCCACCGGAGUCUGUCUCAUACCCAACCAGAUUUCAGUGGAGUGAAGUUCAGGAGGCAUGGAGCUGACA

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  Landgraf et al. confirm expression in human [2]. 


mirna_acc: MI0000286
mirna_id: hsa-mir-210
description: Homo sapiens miR-210 stem-loop
organism: hsa
sequence:
ACCCGGCAGUGCCUCCAGGCGCAGGGCAGCCCCUGCCCACCGCACACUGCGCUGCCCCAGACCCACUGUGCGUGUGACAGCGGCUGAUCUGUGCCUGGGCAGCGCGACCC

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  Its expression was later verified in human BC-1 cells [2]. 


mirna_acc: MI0000287
mirna_id: hsa-mir-211
description: Homo sapiens miR-211 stem-loop
organism: hsa
sequence:
UCACCUGGCCAUGUGACUUGUGGGCUUCCCUUUGUCAUCCUUCGCCUAGGGCUCUGAGCAGGGCAGGGACAGCAAAGGGGUGCUCAGUUGUCACUUCCCACAGCACGGAG

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  The sequence maps to human chromosome 15. 


mirna_acc: MI0000288
mirna_id: hsa-mir-212
description: Homo sapiens miR-212 stem-loop
organism: hsa
sequence:
CGGGGCACCCCGCCCGGACAGCGCGCCGGCACCUUGGCUCUAGACUGCUUACUGCCCGGGCCGCCCUCAGUAACAGUCUCCAGUCACGGCCACCGACGCCUGGCCCCGCC

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR.  The 3' end was not experimentally determined.  The sequence maps to human chromosome 17, but its expression has not been experimentally verified in human. 


mirna_acc: MI0000289
mirna_id: hsa-mir-181a-1
previous_mirna_id: hsa-mir-213
description: Homo sapiens miR-181a-1 stem-loop
organism: hsa
sequence:
UGAGUUUUGAGGUUGCUUCAGUGAACAUUCAACGCUGUCGGUGAGUUUGGAAUUAAAAUCAAAACCAUCGACCGUUGAUUGUACCCUAUGGCUAACCAUCAUCUACUCCA


mirna_acc: MI0000290
mirna_id: hsa-mir-214
description: Homo sapiens miR-214 stem-loop
organism: hsa
sequence:
GGCCUGGCUGGACAGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCGCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCU

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  Landgraf et al. confirm expression in human [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000291
mirna_id: hsa-mir-215
description: Homo sapiens miR-215 stem-loop
organism: hsa
sequence:
AUCAUUCAGAAAUGGUAUACAGGAAAAUGACCUAUGAAUUGACAGACAAUAUAGCUGAGUUUGUCUGUCAUUUCUUUAGGCCAAUAUUCUGUAUGACUGUGCUACUUCAA

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR.  Landgraf et al. confirm expression in human [2]. 


mirna_acc: MI0000292
mirna_id: hsa-mir-216a
previous_mirna_id: hsa-mir-216
description: Homo sapiens miR-216a stem-loop
organism: hsa
sequence:
GAUGGCUGUGAGUUGGCUUAAUCUCAGCUGGCAACUGUGAGAUGUUCAUACAAUCCCUCACAGUGGUCUCUGGGAUUAUGCUAAACAGAGCAAUUUCCUAGCCCUCACGA

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000293
mirna_id: hsa-mir-217
description: Homo sapiens miR-217 stem-loop
organism: hsa
sequence:
AGUAUAAUUAUUACAUAGUUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAGAAUCAGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACAAG

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  The sequence maps to human chromosome 2.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000294
mirna_id: hsa-mir-218-1
description: Homo sapiens miR-218-1 stem-loop
organism: hsa
sequence:
GUGAUAAUGUAGCGAGAUUUUCUGUUGUGCUUGAUCUAACCAUGUGGUUGCGAGGUAUGAGUAAAACAUGGUUCCGUCAAGCACCAUGGAACGUCACGCAGCUUUCUACA

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR.  Landgraf et al. later verified the expression of miR-218 in human [2]. 


mirna_acc: MI0000295
mirna_id: hsa-mir-218-2
description: Homo sapiens miR-218-2 stem-loop
organism: hsa
sequence:
GACCAGUCGCUGCGGGGCUUUCCUUUGUGCUUGAUCUAACCAUGUGGUGGAACGAUGGAAACGGAACAUGGUUCUGUCAAGCACCGCGGAAAGCACCGUGCUCUCCUGCA

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR.  Landgraf et al. confirm expression in human [2]. 


mirna_acc: MI0000296
mirna_id: hsa-mir-219-1
previous_mirna_id: hsa-mir-219
description: Homo sapiens miR-219-1 stem-loop
organism: hsa
sequence:
CCGCCCCGGGCCGCGGCUCCUGAUUGUCCAAACGCAAUUCUCGAGUCUAUGGCUCCGGCCGAGAGUUGAGUCUGGACGUCCCGAGCCGCCGCCCCCAAACCUCGAGCGGG

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the 5' excised miR has been validated in zebrafish, and the 5' end mapped by PCR [2]. The mature products were later validated in human [3].  Two hairpin precursor structures are predicted, mir-219-1 on chromosome 6 (MIR:MI0000296) and mir-219-2 on chromosome 9 (MIR:MI0000740) [2]. 


mirna_acc: MI0000298
mirna_id: hsa-mir-221
description: Homo sapiens miR-221 stem-loop
organism: hsa
sequence:
UGAACAUCCAGGUCUGGGGCAUGAACCUGGCAUACAAUGUAGAUUUCUGUGUUCGUUAGGCAACAGCUACAUUGUCUGCUGGGUUUCAGGCUACCUGGAAACAUGUUCUC

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and later validated in human HL-60 leukemia cells [2]. 


mirna_acc: MI0000299
mirna_id: hsa-mir-222
description: Homo sapiens miR-222 stem-loop
organism: hsa
sequence:
GCUGCUGGAAGGUGUAGGUACCCUCAAUGGCUCAGUAGCCAGUGUAGAUCCUGUCUUUCGUAAUCAGCAGCUACAUCUGGCUACUGGGUCUCUGAUGGCAUCUUCUAGCU

comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR was validated in zebrafish, and the ends mapped by cloning.  Subsequent cloning studies have also verified the expression of miR-222 in human ES cells.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000300
mirna_id: hsa-mir-223
description: Homo sapiens miR-223 stem-loop
organism: hsa
sequence:
CCUGGCCUCCUGCAGUGCCACGCUCCGUGUAUUUGACAAGCUGAGUUGGACACUCCAUGUGGUAGAGUGUCAGUUUGUCAAAUACCCCAAGUGCGGCACAUGCUUACCAG


mirna_acc: MI0000301
mirna_id: hsa-mir-224
description: Homo sapiens miR-224 stem-loop
sequence: GGGCUUUCAAGUCACUAGUGGUUCCGUUUAGUAGAUGAUUGUGCAUUGUUUCAAAAUGGUGCCCUAGUGACUACAAAGCCC
organism: hsa
comment:
This miR was identified and ends mapped by cloning from Weri cells in human.  The sequence maps to chromosome X.  An erratum corrected the originally published name miR-175 to miR-224.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000303
mirna_id: cel-mir-228
description: Caenorhabditis elegans miR-228 stem-loop
sequence: CCUUAUCCCGUUCGCAAUGGCACUGCAUGAAUUCACGGCUAUGCAUAACGACAGACCGCGGAUCAUACGGUACCAUAGCGGACGGUGAUGAGGUUAAU
organism: cel
comment:
This precursor sequence was predicted by comparative computational approaches [1,2].  Northern blotting confirmed that the strand containing the predicted miR is predominantly expressed, and the 5' and 3' ends were confirmed later [4]. 


mirna_acc: MI0000304
mirna_id: cel-mir-229
description: Caenorhabditis elegans miR-229 stem-loop
organism: cel
sequence:
CGCCGGCAAUGACACUGGUUAUCUUUUCCAUCGUGGAAUGCCCCCCAUUGAUUUUUUCCCCUUUUCGGGGGGAAAAAAUUGGAAACGAGAAAGGUAUCGGGUGUCAUAGCCGGCG

comment:
The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [3]. 


mirna_acc: MI0000311
mirna_id: cel-mir-236
description: Caenorhabditis elegans miR-236 stem-loop
sequence: UCGGUGACCGAUGUCCAGCGUCUUACCUGUUCAAUAUUUAGACUGACUAUCAAAGAGAUCUAAUACUGUCAGGUAAUGACGCUGGAUUGUCAUGUCAU
organism: cel
comment:
This precursor sequence was predicted by comparative computational approaches [1,3].  The excised miRNA sequence was predicted to comprise bases 64 to 87, and the precise 5' and 3' ends were determined later [4]. Northern blotting confirmed that the strand containing the predicted miR is predominantly expressed. 


mirna_acc: MI0000312
mirna_id: cel-mir-237
description: Caenorhabditis elegans miR-237 stem-loop
sequence: UUCUACAUUGCGUGGUCCCUGAGAAUUCUCGAACAGCUUCAAAGUGUUCAAGCUGUCGAGUUUUGUCAAGGACCAAACAAUAGAAGAUCACUUGGGAAC
organism: cel
comment:
The sequence is reported to be related to lin-4 [2].  The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [3]. 


mirna_acc: MI0000315
mirna_id: cel-mir-239b
description: Caenorhabditis elegans miR-239b stem-loop
sequence: GCGACAGAUGCAAUUUUUGUACUACACAAAAGUACUGGUCAUUUAAGUUGAGGCUCAGCACUUUUGUGGUGUGCAAAAAUGGCAAGUUGCUUUUAUCU
organism: cel
comment:
miR-239b was predicted by computational analysis and conservation in C. elegans and C. briggsae, and the microRNA confirmed by PCR amplification, cloning and sequencing [1].  A large scale cloning and sequencing study finds two dominant mature miRNA products: the second is 1 nt shorter at the 5' end [3]. 


mirna_acc: MI0000322
mirna_id: cel-mir-246
description: Caenorhabditis elegans miR-246 stem-loop
sequence: AUCUGAAUUAUAAAACAUCGCCUAACCGUUGUCAUGUAAUAUUUCCCAGAGAAAAUGAUAUUACAUGUUUCGGGUAGGAGCUGUUCAAACUUUGGAC
organism: cel
comment:
The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [2]. 


mirna_acc: MI0000329
mirna_id: cel-mir-253
description: Caenorhabditis elegans miR-253 stem-loop
organism: cel
sequence:
GAAUUGUUCCGAUCGCCGCUCUUUUCACACACCUCACUAACACUGACCACCGAUGCAUAGAUGUUAGUAGGCGUUGUGGGAAGGGCGGCGACAGUGAACGUCGUUUC

comment:
A mature miRNA product from the 5' arm of this hairpin precursor was first identified [1].  A later large scale cloning and sequencing study identified a 3' product and showed it to be the dominant mature miRNA [2]. 


mirna_acc: MI0000330
mirna_id: cel-mir-254
description: Caenorhabditis elegans miR-254 stem-loop
organism: cel
sequence:
ACUAUGCAUAUUGCCGCCUACAGAAGCAUAGAUUUCCACAAACCAUUCGAGGUGUUUGUGCAAAUCUUUCGCGACUGUAGGCGGCGAACAUGCAGUUUUU


mirna_acc: MI0000331
mirna_id: cel-mir-255
description: Caenorhabditis elegans miR-255 stem-loop
organism: cel
sequence:
CAGUGGUUCGACUAAAUUUUGGAGGUAAGAAAUCUUUGUAGUUCUCCGUAUUGUGACGUGAAAACUGAAGAGAUUUUUUACAGACUUCACAAAUUUGAAAUAUAUUCCUG

comment:
This precursor sequence was identified computationally using sequence homology with C. briggsae [1].  The mature microRNA was identified later [2]. 


mirna_acc: MI0000333
mirna_id: cel-mir-256
description: Caenorhabditis elegans miR-256 stem-loop
comment: This sequence maps to chromosome V and appears to be related to mir-1.
organism: cel
sequence:
GCAAGGAGUGCAGAGGCUUACUAUGAGACGGUCAAGAGGCGCCUCCGUCACGUGGAUACGUCGGGUGGAAUGCAUAGAAGACUGUACUCAAAAAAUUUUAC


mirna_acc: MI0000334
mirna_id: cel-mir-257
description: Caenorhabditis elegans miR-257 stem-loop
comment: This sequence maps to chromosome IV.
organism: cel
sequence:
AUAAUAUUUCCCGCUGAGUAUCAGGAGUACCCAGUGAUCGCCUUCACAUAUUGGGAAGAAGUAUGUGAUUGCGUCCUGCAGUUCUUCCAUGAUGUACUCAGG


mirna_acc: MI0000336
mirna_id: cel-mir-259
description: Caenorhabditis elegans miR-259 stem-loop
organism: cel
sequence:
UCAGUCAUUGAAACGAGUAAAUCUCAUCCUAAUCUGGUAGCAUCUUUCGAACCUUGCCACCGAUUUGGCAUGGGAUUGACUUGUUAAAUAGUGACUUUUUU

comment:
miR-259 was predicted by computational analysis and conservation in C. elegans and C. briggsae, and the microRNA confirmed by PCR amplification, cloning and sequencing [1].  The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [3]. 


mirna_acc: MI0000337
mirna_id: cel-mir-260
description: Caenorhabditis elegans miR-260 stem-loop
comment: This sequence maps to chromosome II.
organism: cel
sequence:
CGUACAACAAAAUUAUUGCGAGAGAAUUUUUUAACAUGGCGUUUGCUUUACCAGGUCGAUAGACUAUCGUGAUGUCGAACUCUUGUAGGACAAUCUGGUAUUU


mirna_acc: MI0000339
mirna_id: cel-mir-262
description: Caenorhabditis elegans miR-262 stem-loop
comment: This sequence maps to chromosome V.
organism: cel
sequence:
GUGCAAAAUUGUAUUAAAAUAAACUUUAUUGGAUUACAAAAAAAAUGUAUCAAUUUUUCUUUUUCAUUUUUACGUUUCUCGAUGUUUUCUGAUACUGUUGCUAGCAGU


mirna_acc: MI0000343
mirna_id: dme-mir-263a
previous_mirna_id: dme-mir-263
description: Drosophila melanogaster miR-263a stem-loop
sequence: UAGAUCUCGGCACAGUUAAUGGCACUGGAAGAAUUCACGGGGUAAUUUUUAUACAACCCGUGAUCUCUUAGUGGCAUCUAUGGUGCGAGAAUAA
organism: dme
comment:
This sequence was computationally predicted by two independent groups based on similarity with C. elegans miR-228 (MIR:MI0000303) [1] and conservation in D. pseudoobscura [2].  Northern blotting confirmed that the strand containing the predicted miR is predominantly expressed, but the precise 5' or 3' ends are unknown.  The sequence was named miR-263 in in reference [1], and maps to chromosome 2L. 


mirna_acc: MI0000344
mirna_id: cel-mir-264
description: Caenorhabditis elegans miR-264 stem-loop
sequence: UGGCGGCGGUCGACAUGUACAUAUCACCAGUCUGGCUUUUCCCGUUUCCGCGAGCAAGCGGCGGGUGGUUGUUGUUAUGGGAUACCGGAGCCA
organism: cel
comment:
This precursor sequence was predicted by comparative computational approaches.  The excised miRNA sequence is predicted and the precise  5' or 3' end unknown.  A PCR amplification protocol confirmed that  the strand containing the predicted miR is predominantly expressed. 


mirna_acc: MI0000350
mirna_id: cel-mir-270
description: Caenorhabditis elegans miR-270 stem-loop
sequence: GUCGCUAGCCUCUUUACCUGCCUACACACCUUUCUGCCUACGUGGCACAUUGGUAGGCAAGAGGGCAUGAUGUAGCAGUGGAGAUGGACUGCCAC
organism: cel
comment:
This sequence was predicted by computational approaches and validated using a PCR amplification protocol. 


mirna_acc: MI0000354
mirna_id: dme-mir-184
description: Drosophila melanogaster miR-184 stem-loop
organism: dme
sequence:
GGUUGGCCGGUGCAUUCGUACCCUUAUCAUUCUCUCGCCCCGUGUGCACUUAAAGACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACCAAUUCAUC

comment:
miR-184 was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the 5' end of the excised miRNA by cloning and reported a length distribution of 19-23 nt with 22 nt the most commonly expressed.  They also reported the less predominantly expressed sequence miR-184* from the opposite 5' arm.  The sequence is localised to chromosome 2R. 


mirna_acc: MI0000355
mirna_id: dme-mir-274
description: Drosophila melanogaster miR-274 stem-loop
organism: dme
sequence:
UCCUGUGUUGCAGUUUCGUUUUGUGACCGACACUAACGGGUAAUUGUUUGGCCGCCAGGAUUACUCGUUUUUGCGAUCACAAAUUAUGAAAUUGCAGCAA

comment:
This sequence is computationally predicted based on conservation in D. pseudoobscura.  The precise 5' or 3' ends are unknown.  Northern blotting confirmed that the strand containing the predicted miR is predominantly expressed.  The sequence is localised to chromosome 3L. 


mirna_acc: MI0000356
mirna_id: dme-mir-275
description: Drosophila melanogaster miR-275 stem-loop
sequence: UGUAAAGUCUCCUACCUUGCGCGCUAAUCAGUGACCGGGGCUGGUUUUUUAUAUACAGUCAGGUACCUGAAGUAGCGCGCGUGGUGGCAGACAUAUAU
organism: dme
comment:
miR-275 was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that  the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the 5' end of the excised miRNA by cloning and reported a length distribution of 19-25 nt with 22 nt the most commonly expressed.  The sequence is localised to chromosome 2L. 


mirna_acc: MI0000357
mirna_id: dme-mir-92a
description: Drosophila melanogaster miR-92a stem-loop
sequence: AAUAUGAAUUUCCCGUAGGACGGGAAGGUGUCAACGUUUUGCAUUUCGAAUAAACAUUGCACUUGUCCCGGCCUAUGGGCGGUUUGUAAUAAACA
organism: dme
comment:
miR-92a was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that  the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the 5' end of the excised miRNA by cloning and reported a length distribution of 22-25 nt with 22 nt the most commonly expressed.  The sequence is localised to chromosome 3R. 


mirna_acc: MI0000358
mirna_id: dme-mir-219
description: Drosophila melanogaster miR-219 stem-loop
organism: dme
sequence:
UAAUUCGAUUUUUAGCUAUGAUUGUCCAAACGCAAUUCUUGUUGAUAUUCAAUAUUCAAGGGUUGCGACUGGGCAUCGCGGCUCGAAAUAAGAAUACAAC

comment:
This sequence is computationally predicted based on conservation in D. pseudoobscura [1].  The sequence of the excised miR is strikingly conserved in human (MIR:MI0000296), but the expression of the miR has not been  confirmed in fly and the precise 5' or 3' ends are unknown.  The sequence  is localised to chromosome 3L. 


mirna_acc: MI0000359
mirna_id: dme-mir-276a
description: Drosophila melanogaster miR-276a stem-loop
sequence: CCUGGUUUUUGCCAUCAGCGAGGUAUAGAGUUCCUACGUUCAUUAUAAACUCGUAGGAACUUCAUACCGUGCUCUUGGAAGACCAAAAAACAACCAAG
organism: dme
comment:
miR-276 was reported independently in references [1] and [2].   Reference [2] reported a 22 nt excised sequence from the 3' arm of the precursor by cloning.  Computational approaches followed by Northern blotting predicted an excised sequence from the 5' arm which is designated miR-276a* here [1].  The sequence is localised to chromosome 3L. 


mirna_acc: MI0000360
mirna_id: dme-mir-277
description: Drosophila melanogaster miR-277 stem-loop
organism: dme
sequence:
UUGAAGGUUUUGGGCUGCGUGUCAGGAGUGCAUUUGCACUGAAACUAUCUGAAGCAUGUAAAUGCACUAUCUGGUACGACAUUCCAGAACGUACAAUCUU

comment:
miR-277 was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that  the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the 5' end of the excised miRNA by cloning and reported a length distribution of 21-23 nt with 23 nt the most commonly expressed.  The sequence is localised to chromosome 3R.  Stark et al. [3] have predicted that miR-277 controls the pathway for valine, leucine and isoleucine degradation by downregulating many of its enzymes. 


mirna_acc: MI0000361
mirna_id: dme-mir-278
description: Drosophila melanogaster miR-278 stem-loop
sequence: GUAAUGGUACGGUGCGACCGGAUGAUGGUUCACAACGACCGUGUCAUUUAAACGGGUCGGUGGGACUUUCGUCCGUUUGUAACGCCAUUUGUCAACGA
organism: dme
comment:
miR-278 was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that  the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the 5' end of the excised miRNA by cloning and reported a length distribution of 20-22 nt with 22 nt the most commonly expressed.  The sequence is localised to chromosome 2R. 


mirna_acc: MI0000362
mirna_id: dme-mir-133
description: Drosophila melanogaster miR-133 stem-loop
sequence: ACCUGCAACACUGUGUGUAGCUGGUUGACAUCGGGUCAGAUCUGUUUUUCAAGCAUUUGGUCCCCUUCAACCAGCUGUAGCCAGUGGUUGAUGACAAC
organism: dme
comment:
miR-133 was reported independently by three groups using computational prediction [2], Northern blot analysis [1] and cloning [3].  References [1] and [2] confirmed that the strand containing the predicted miR is predominantly expressed [1].  Reference [3] confirmed the ends of the excised miRNA by cloning.  The sequence maps to chromosome 2L. 


mirna_acc: MI0000363
mirna_id: dme-mir-279
description: Drosophila melanogaster miR-279 stem-loop
organism: dme
sequence:
GGAAUUCAUACUACUGUUUUUAGUGGGUGGGGGUCCAGUGUUUCACAUUGAUUUUCUUAGUAUUUGUGACUAGAUCCACACUCAUUAAUAACGGUAGUUC

comment:
miR-279 was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that  the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the ends of the excised miRNA by cloning.  The sequence is localised to chromosome 3R. 


mirna_acc: MI0000365
mirna_id: dme-mir-280
description: Drosophila melanogaster miR-280 stem-loop
sequence: UGGCUUUUAUGUAUUUACGUUGCAUAUGAAAUGAUAUUUAUAGUAAACAGAUUAUUUUAUAUGCAGGUAUAUGCAAGUCGAGGUCCUCCACACUG
organism: dme
comment:
This sequence is computationally predicted based on conservation in D. pseudoobscura.  The precise 5' or 3' ends are unknown.  Northern blotting confirmed that the strand containing the predicted miR is predominantly expressed.  The sequence is localised to chromosome 2R. 


mirna_acc: MI0000366
mirna_id: dme-mir-281-1
description: Drosophila melanogaster miR-281-1 stem-loop
sequence: CGAAUAAGUGAAUAAAGAGAGCUGUCCGUCGACAGUCCAGAAACUAUUUAAUAUCACUGUCAUGGAAUUGCUCUCUUUGUAUAAUAUUCG
organism: dme
comment:
miR-281 was reported independently in references [1] and [2].  The sequence in this entry is from reference [2] which identified a 23 nt excised sequence from the 3' arm of the precursor by cloning. Reference [1] reported the reverse complement of this foldback precursor from computational prediction and northern blotting.  The predicted mature sequence (5' and 3' ends unknown) from the 3' arm of the reverse complement was named miR-281a in reference [1] and is designated miR-281-1* here.   The predicted precursor maps to chromosome 2R. 


mirna_acc: MI0000368
mirna_id: dme-mir-283
description: Drosophila melanogaster miR-283 stem-loop
organism: dme
sequence:
CUCACACGAUUCUCAAAGGUAAAUAUCAGCUGGUAAUUCUGGGAGCUAAGCCUAAAUAUGAAACACUCGGAAUUUCAGUUGGUAUCGACUUUUUUGAAUU


mirna_acc: MI0000369
mirna_id: dme-mir-284
description: Drosophila melanogaster miR-284 stem-loop
organism: dme
sequence:
GUUGCAGUUCCUGGAAUUAAGUUGACUGUGUAGCCUGUGAGGGCAAGGCUUGAAUAAUGCUCCUGAAGUCAGCAACUUGAUUCCAGCAAUUGCGGCCCGA

comment:
This sequence is computationally predicted based on conservation in D. pseudoobscura.  The precise 5' or 3' ends are unknown.  Northern blotting confirmed that the strand containing the predicted miR is predominantly expressed.  The sequence is localised to chromosome 3R. 


mirna_acc: MI0000370
mirna_id: dme-mir-281-2
description: Drosophila melanogaster miR-281-2 stem-loop
sequence: CGAAUUGUGAAAUGAAGAGAGCUAUCCGUCGACAGUCAAGUUAAGACCGAUUGUAAUACUGUCAUGGAAUUGCUCUCUUUGUAUAACAUUCG
organism: dme
comment:
miR-281 was reported independently in references [1] and [2].  The sequence in this entry is from reference [2] which identified a 23 nt excised sequence from the 3' arm of the precursor by cloning. Reference [1] reported the reverse complement of this foldback precursor from computational prediction and northern blotting.  The predicted mature sequence (5' and 3' ends unknown) from the 3' arm of the reverse complement was named miR-281b in reference [1] and is  designated miR-281-2* here.  The predicted precursor maps to chromosome 2R. 


mirna_acc: MI0000371
mirna_id: dme-mir-34
description: Drosophila melanogaster miR-34 stem-loop
sequence: AAUUGGCUAUGCGCUUUGGCAGUGUGGUUAGCUGGUUGUGUAGCCAAUUAUUGCCGUUGACAAUUCACAGCCACUAUCUUCACUGCCGCCGCGACAAGC
organism: dme
comment:
This sequence is computationally predicted based on conservation in D. pseudoobscura and C. elegans.  The precise 5' or 3' ends are unknown. Expression in D. melanogaster was confirmed by Northern blot analysis [1]. Aravin et al. later identify the 5' and 3' ends by cloning [3]. 


mirna_acc: MI0000373
mirna_id: dme-mir-124
description: Drosophila melanogaster miR-124 stem-loop
organism: dme
sequence:
UCAUUUGGUACGUUUUUCUCCUGGUAUCCACUGUAGGCCUAUAUGUAUUUCCACCAUAAGGCACGCGGUGAAUGCCAAGAGCGAACGCAGUUCUACAAAU

comment:
miR-124 was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that  the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the 5' end of the excised miRNA by cloning and reported a length distribution of 19-23 nt with 23 nt the most commonly expressed.  The sequence is localised to chromosome 2L. 


mirna_acc: MI0000374
mirna_id: dme-mir-79
description: Drosophila melanogaster miR-79 stem-loop
sequence: UGAAGCUGACUUGCCAUUGCUUUGGCGCUUUAGCUGUAUGAUAGAUUUAAACUACUUCAUAAAGCUAGAUUACCAAAGCAUUGGCUUCUGCAGGUCA
organism: dme
comment:
miR-79 was reported independently by three groups using computational prediction [2], Northern blot analysis [1] and cloning [3].  References [1] and [2] confirmed that the strand containing the predicted miR is predominantly expressed [1].  Reference [3] confirmed the ends of the excised miRNA by cloning.  The sequence maps to chromosome 2L. 


mirna_acc: MI0000376
mirna_id: dme-mir-210
description: Drosophila melanogaster miR-210 stem-loop
organism: dme
sequence:
AAAGGUGCUUAUUGCAGCUGCUGGCCACUGCACAAGAUUAGACUUAAGACUCUUGUGCGUGUGACAGCGGCUAUUGUAAGAGGCCAUAGAAGCAACAGCC

comment:
This sequence is computationally predicted based on conservation in D. pseudoobscura.  The precise 5' or 3' ends are unknown.  Northern blotting confirmed that the strand containing the predicted miR is predominantly expressed.  The sequence is localised to chromosome X. 


mirna_acc: MI0000377
mirna_id: dme-mir-285
description: Drosophila melanogaster miR-285 stem-loop
sequence: UCGAAUCGAAGAACUGAGAUCGAUUGGUGCAUAGAUAUCAGGAGAACCCACUCAAUUUAACUCUAGCACCAUUCGAAAUCAGUGCUUUUGAUAAGAAAC
organism: dme
comment:
miR-285 was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that  the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the ends of the excised miRNA by cloning.  The sequence is localised to chromosome 3L. 


mirna_acc: MI0000378
mirna_id: dme-mir-100
description: Drosophila melanogaster miR-100 stem-loop
organism: dme
sequence:
CCAUUAACAGAAACCCGUAAAUCCGAACUUGUGCUGUUUUAUAUCUGUUACAAGACCGGCAUUAUGGGAGUCUGUCAAUGCAAACAACUGGUUUUUGGCA

comment:
miR-100 was reported independently by three groups using computational prediction [2], Northern blot analysis [1] and cloning [3].  References [1] and [2] confirmed that the strand containing the predicted miR is predominantly expressed [1].  Reference [3] confirmed the ends of the excised miRNA by cloning.  The sequence is localised to chromosome 2L. 


mirna_acc: MI0000379
mirna_id: dme-mir-92b
description: Drosophila melanogaster miR-92b stem-loop
organism: dme
sequence:
UAAAACGUCACCUGAUGUAGGCCGUGCCCAGUGCUUAUUUGUUGCAUUUUCGAAAUACAAAUUGCACUAGUCCCGGCCUGCAAUGAGUGUCGCAGUCGAC

comment:
miR-92b was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that  the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the ends of the excised miRNA by cloning.  The sequence is localised to chromosome 3R. 


mirna_acc: MI0000380
mirna_id: dme-mir-286
description: Drosophila melanogaster miR-286 stem-loop
organism: dme
sequence:
UUAAAAUUGAAUGGCGAAUGUCGGUAUGGUCUCUUUUUCAAAGAAAGGUUUCGAUUAAGCGAAGUGACUAGACCGAACACUCGUGCUAUAAUUUUAAAAU

comment:
miR-286 was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that  the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the 5' end of the excised miRNA by cloning and reported a length distribution of 22-24 nt with 23 nt the most commonly expressed.  The sequence is localised to chromosome 2R. 


mirna_acc: MI0000381
mirna_id: dme-mir-287
description: Drosophila melanogaster miR-287 stem-loop
sequence: GGACGCCGGGGAUGUAUGGGUGUGUAGGGUCUGAAAUUUUGCACACAUUUACAAUAAUUGUAAAUGUGUUGAAAAUCGUUUGCACGACUGUGA
organism: dme
comment:
This sequence is computationally predicted based on conservation in D. pseudoobscura.  The precise 5' or 3' ends are unknown.  Northern blotting confirmed that the strand containing the predicted miR is predominantly expressed.  The sequence is localised to chromosome 2L. 


mirna_acc: MI0000382
mirna_id: dme-mir-87
description: Drosophila melanogaster miR-87 stem-loop
sequence: AACACAUUUCAUUCGCGCCUGUAUCUUGCUGAACCGCUGCCAUUAUGGCCAACGAUCCGGUUGAGCAAAAUUUCAGGUGUGUGAGAAAUGUGUUUAGCA
organism: dme
comment:
miR-87 was predicted by computational approaches based on conservation in C. elegans [2,3].  Northern blot analysis confirmed that the strand containing the predicted miR is predominantly expressed [1,2].  The precise 5' and 3' ends are not known, but alignment with the worm miR suggests the sequence shown here is closest [2].  This miR maps to chromosome 2L. 


mirna_acc: MI0000383
mirna_id: dme-mir-263b
description: Drosophila melanogaster miR-263b stem-loop
sequence: UUGCUGACUUUGAGUCUUGGCACUGGGAGAAUUCACAGUUGACUUUAUUAUUCUGUGGUUCUGCGGGUGCCAAAACUUAAAAACCGGCUU
organism: dme
comment:
miR-263b was reported independently in references [1] and [2]. Computational prediction followed by northern blotting confirmed that  the strand containing the predicted miR is predominantly expressed [1]. Reference [2] confirmed the ends of the excised miRNA by cloning.  The sequence is localised to chromosome 3L. 


mirna_acc: MI0000387
mirna_id: dme-bantam
previous_mirna_id: dme-bantam;bantam
description: Drosophila melanogaster bantam stem-loop
sequence: AUUUGACUACGAAACCGGUUUUCGAUUUGGUUUGACUGUUUUUCAUACAAGUGAGAUCAUUUUGAAAGCUGAUUUUGUCAA
organism: dme
comment:
bantam microRNA was predicted independently by two groups using computational approaches [1,2].  Northern blotting confirmed that the strand containing the predicted miR is predominantly expressed. Subsequent cloning studies have independently identified the same miRNA and confirmed the 5' end [3].  A length distribution of 20-23 nt was reported with a 23 nt sequence the most commonly expressed.  bantam is  reported to promote tissue growth [1]. bantam expression is temporally  and spatially regulated in response to patterning cues. bantam microRNA  simultaneously stimulates cell proliferation and prevents apoptosis and  is predicted to target the pro-apoptotic gene hid [1].  The sequence maps to chromosome 3L. 


mirna_acc: MI0000395
mirna_id: mmu-mir-297a-1
previous_mirna_id: mmu-mir-297-1
description: Mus musculus miR-297a-1 stem-loop
sequence: AUAUGUAUGUAUGUAUGUAUGUGUGCAUGUGCAUGUGCAUGUAUGCAUAUUGCAUGUAUAUAUUAUGCAUACAUGU
organism: mmu
comment:
Houbaviy et al. report that the cloned sequence of miR-297 is found over 20 times in the mouse genomic sequence [1].  This sequence appears to match several low complexity repetitive regions.  Confidence in which loci actually express miR-297 is low because of the low complexity nature of the sequence.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000397
mirna_id: mmu-mir-297a-2
previous_mirna_id: mmu-mir-297-3;mmu-mir-297-2
description: Mus musculus miR-297a-2 stem-loop
sequence: CUGUGUGUAUAUGUAUGUGUGCAUGUGCAUGUGUGUAUAUGAGUAUACAUAUACAUACGCACAUACCCAUACAAGCAUGCACACAAACCC
organism: mmu
comment:
Houbaviy et al. report that the cloned sequence of miR-297 is found over 20 times in the mouse genomic sequence [1].  This sequence appears to match several low complexity repetitive regions.  Confidence in which loci actually express miR-297 is low because of the low complexity nature of the sequence. 


mirna_acc: MI0000403
mirna_id: mmu-mir-34c
previous_mirna_id: mmu-mir-34a
description: Mus musculus miR-34c stem-loop
sequence: AGUCUAGUUACUAGGCAGUGUAGUUAGCUGAUUGCUAAUAGUACCAAUCACUAACCACACAGCCAGGUAAAAAGACU
organism: mmu
comment:
Houbaviy et al. cloned 3 closely related sequences from mouse embryonic stem cells [1], and named them miR-34a, miR-34b and miR-172.  These names have been remapped to miR-34c (MIR:MI0000403), miR-34b (MIR:MI0000404) and miR-34a (MIR:MI0000584) to clarify homology with human sequences. 


mirna_acc: MI0000404
mirna_id: mmu-mir-34b
description: Mus musculus miR-34b stem-loop
sequence: GUGCUCGGUUUGUAGGCAGUGUAAUUAGCUGAUUGUAGUGCGGUGCUGACAAUCACUAACUCCACUGCCAUCAAAACAAGGCAC
organism: mmu
comment:
Houbaviy et al. cloned 3 closely related sequences from mouse embryonic stem cells [1], and named them miR-34a, miR-34b and miR-172.  These names have been remapped to miR-34c (MIR:MI0000403), miR-34b (MIR:MI0000404) and miR-34a (MIR:MI0000584) to clarify homology with human sequences.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000405
mirna_id: mmu-let-7d
description: Mus musculus let-7d stem-loop
organism: mmu
sequence:
AAUGGGUUCCUAGGAAGAGGUAGUAGGUUGCAUAGUUUUAGGGCAGAGAUUUUGCCCACAAGGAGUUAACUAUACGACCUGCUGCCUUUCUUAGGGCCUUAUU


mirna_acc: MI0000406
mirna_id: mmu-mir-106a
description: Mus musculus miR-106a stem-loop
sequence: AUGUCAAAGUGCUAACAGUGCAGGUAGCUUUUUGAGUUCUACUGCAGUGCCAGCACUUCUUACAU
organism: mmu
comment:
Mouse and human miR-106a (MIR:MI0000406 and MIR:MI0000113) differ at two positions but the precursor sequences are clearly closely related.  The sequences are also related to mir-17 (MIR:MI0000071 and MIR:MI0000687). The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000407
mirna_id: mmu-mir-106b
description: Mus musculus miR-106b stem-loop
sequence: CCUGCUGGGACUAAAGUGCUGACAGUGCAGAUAGUGGUCCUCUCUGUGCUACCGCACUGUGGGUACUUGCUGCUCCAGCAGG
organism: mmu
comment:
Reference [1] reported the same miRNA sequence with two different identifiers - miR-106b and miR-94.  This sequence maps to mouse chromosome 5. 


mirna_acc: MI0000410
mirna_id: dme-mir-31b
description: Drosophila melanogaster miR-31b stem-loop
comment: miR-31b was identified and ends mapped by cloning. The sequence is localised to chromosome X.
organism: dme
sequence:
CAAAUAAUGAAUUUGGCAAGAUGUCGGAAUAGCUGAGAGCACAGCGGAUCGAACAUUUUAUCGUCCGAAAAAAUGUGAUUAUUUUUGAAAAGCGGCUAUGCCUCAUCUAGUCAAUUGCAUUACUUUG


mirna_acc: MI0000411
mirna_id: dme-mir-304
description: Drosophila melanogaster miR-304 stem-loop
sequence: GCAGCAUUGAAUAAUCUCAAUUUGUAAAUGUGAGCGGUUUAAGCCAUUUGACGCACUCACUUUGCAAUUGGAGAUUGCUCGAGACUGC
organism: dme
comment:
miR-304 was identified and 5' end mapped by cloning.  Reference [1] reports a length distribution of 21-23 nt, with 23 nt most commonly expressed.  The  sequence is localised to chromosome X. 


mirna_acc: MI0000412
mirna_id: dme-mir-305
description: Drosophila melanogaster miR-305 stem-loop
sequence: CAUGUCUAUUGUACUUCAUCAGGUGCUCUGGUGUGUCUCGUAACCCGGCACAUGUUGAAGUACACUCAAUAUG
organism: dme
comment:
Lai et al. predicted this sequence based on conservation in D. pseudoobscura, but did not verify expression [2].  Aravin et al. describe identification and mapping of the 5' end of the excised sequence by cloning [1].  They report a length distribution of 19-23 nt, with 23 nt most commonly expressed.  The sequence maps to chromosome 2L. 


mirna_acc: MI0000413
mirna_id: dme-mir-9c
description: Drosophila melanogaster miR-9c stem-loop
sequence: AUUUUUGCUGUUUCUUUGGUAUUCUAGCUGUAGAUUGUUUCACGCACAUUGUAUAUCAUCUAAAGCUUUUAUACCAAAGCUCCAGCUUAAAU
organism: dme
comment:
Lai et al. predicted this sequence based on conservation in D. pseudoobscura, but did not verify expression [2].  Aravin et al. describe identification and mapping of the ends of the excised sequence by cloning [1].  The sequence maps to chromosome 2L. 


mirna_acc: MI0000414
mirna_id: dme-mir-306
description: Drosophila melanogaster miR-306 stem-loop
sequence: GUCCACUCGAUGGCUCAGGUACUUAGUGACUCUCAAUGCUUUUGACAUUUUGGGGGUCACUCUGUGCCUGUGCUGCCAGUGGGAC
organism: dme
comment:
miR-306 was identified and ends mapped by cloning.  Reference [1] also identified a less predominantly expressed miR from the opposite arm of the precursor, designated miR-306* here.  The sequence is localised to chromosome X. 


mirna_acc: MI0000415
mirna_id: dme-mir-9b
description: Drosophila melanogaster miR-9b stem-loop
sequence: UGCAUAUUAUUUGCUCUUUGGUGAUUUUAGCUGUAUGGUGUUUAUGUAUAUUCCAUAGAGCUUUAUUACCAAAAACCAAAUGGUUUCUGCA
organism: dme
comment:
Lai et al. predicted this sequence based on conservation in D. pseudoobscura, but did not verify expression [2].  Aravin et al. describe identification and mapping of the 5' end of the excised sequence by cloning [1].  They report a length distribution of 21-23 nt, with 23 nt most commonly expressed.  The sequence maps to chromosome 2L. 


mirna_acc: MI0000416
mirna_id: dme-let-7
previous_mirna_id: dme-let-7L
description: Drosophila melanogaster let-7 stem-loop
sequence: UCUGGCAAAUUGAGGUAGUAGGUUGUAUAGUAGUAAUUACACAUCAUACUAUACAAUGUGCUAGCUUUCUUUGCUUGA
organism: dme
comment:
let-7 was identified and 5' end mapped by cloning.  Reference [1] reports a length distribution of 20-21 nt, with 21 nt most commonly expressed. The sequence is localised to chromosome 2L. 


mirna_acc: MI0000417
mirna_id: dme-mir-125
description: Drosophila melanogaster miR-125 stem-loop
comment: miR-125 was identified and ends mapped by cloning. The sequence is localised to chromosome 2L.
organism: dme
sequence:
GACAUGUGCAAAUGUUUGUAUGGCUGAUUCCCUGAGACCCUAACUUGUGACUUUUAAUACCAGUUUCACAAGUUUUGAUCUCCGGUAUUGGACGCAAACUUGCUGAUGUU


mirna_acc: MI0000419
mirna_id: dme-mir-308
description: Drosophila melanogaster miR-308 stem-loop
sequence: CUCGCAGUAUAUUUUUGUGUUUUGUUUCGUUUUGCAAUCCAAAUCACAGGAUUAUACUGUGAG
organism: dme
comment:
miR-308 was identified and 5' end mapped by cloning.  Reference [1] reports a length distribution of 18-22 nt, with 22 nt most commonly expressed.  The  sequence is localised to chromosome 2R. 


mirna_acc: MI0000420
mirna_id: dme-mir-31a
description: Drosophila melanogaster miR-31a stem-loop
sequence: UCCGUUGGUAAAUUGGCAAGAUGUCGGCAUAGCUGACGUUGAAAAGCGAUUUUGAAGAGCGCUAUGCUGCAUCUAGUCAGUUGUUCAAUGGA
organism: dme
comment:
miR-31a was identified and 5' end mapped by cloning.  Reference [1] reports a length distribution of 22-23 nt, with 23 nt most commonly expressed.  The  sequence is localised to chromosome 2R. 


mirna_acc: MI0000423
mirna_id: dme-mir-311
description: Drosophila melanogaster miR-311 stem-loop
sequence: UCUAGAUCAUUUUUCGGACGGUAUAUGGGUUAAUAUUUCAUUUGUCGAAUAUAUUGCACAUUCACCGGCCUGAAAAUAUCAAGA
organism: dme
comment:
miR-311 was identified and 5' end mapped by cloning.  Reference [1] reports a length distribution of 22-23 nt, with 22 nt most commonly expressed.  The  sequence is localised to chromosome 2R. 


mirna_acc: MI0000424
mirna_id: dme-mir-312
description: Drosophila melanogaster miR-312 stem-loop
sequence: GAUUUGGUUCGUCACAAGGGCAAUUCUGCAUUUUUUAACUAGUAUUGCACUUGAGACGGCCUGAUU
organism: dme
comment:
miR-312 was identified and 5' end mapped by cloning.  Reference [1] reports a length distribution of 22-23 nt, with 22 nt most commonly expressed.  The  sequence is localised to chromosome 2R. 


mirna_acc: MI0000425
mirna_id: dme-mir-313
description: Drosophila melanogaster miR-313 stem-loop
sequence: AUUUUCUGCUGCGGAUGGGGGCAGUACUGUUUUUUUAACAUUGAGUAUUGCACUUUUCACAGCCCGAAAAU
organism: dme
comment:
miR-313 was predicted based on conservation of clustering with miR-310 (MIR:MI0000422), miR-311 (MIR:MI0000423) and miR-312 (MIR:MI0000424). Its expression has not been verified. 


mirna_acc: MI0000427
mirna_id: dme-mir-315
description: Drosophila melanogaster miR-315 stem-loop
sequence: CACUUAUAUAAUUUUGAUUGUUGCUCAGAAAGCCCUCAUUGUUUACCAGUUGGCUUUCGAGCAAUAAUUGAAACCAGAUAAGUG
organism: dme
comment:
Lai et al. predicted this sequence based on conservation in D. pseudoobscura, but did not verify expression [2].  Aravin et al. describe identification and mapping of the ends of the excised sequence by cloning [1].  The sequence maps to chromosome 3L. 


mirna_acc: MI0000428
mirna_id: dme-mir-316
description: Drosophila melanogaster miR-316 stem-loop
sequence: AAAUUCUAGUCGAUUUGUCUUUUUCCGCUUACUGGCGUUUCAAUUCCACAACGACAGGAAAGGGAAAAAGGCGUAUUUACUAUGAGUUU
organism: dme
comment:
Lai et al. predicted this sequence based on conservation in D. pseudoobscura, but did not verify expression [2].  Aravin et al. describe identification and mapping of the 5' end of the excised sequence by cloning [1].  They report a length distribution of 20-22 nt, with 22 nt most commonly expressed.  The sequence maps to chromosome 3L. 


mirna_acc: MI0000429
mirna_id: dme-mir-317
description: Drosophila melanogaster miR-317 stem-loop
sequence: AUGCAACUGCCAUUGGGAUACACCCUGUGCUCGCUUUGAAUGAAAUGCAAGCAAGUGAACACAGCUGGUGGUAUCCAGUGGCCGUUUGGCAU
organism: dme
comment:
miR-317 was identified and 5' end mapped by cloning.  Reference [1] reports a length distribution of 20-24 nt, with 24 nt most commonly expressed.  The  sequence is localised to chromosome 3R. 


mirna_acc: MI0000431
mirna_id: dme-mir-2c
description: Drosophila melanogaster miR-2c stem-loop
organism: dme
sequence:
UCGUAUCUUACUUUCAAUGUCAUCAAAAAGGGCUGAAGAAAGAUAUUUCUGCAUUUGAAUCGUAUCACAGCCAGCUUUGAUGGGCAUUGCAAUGAGCAGCGA

comment:
miR-2c was predicted by similarity to miR-2a (MIR:MI0000117).  Expression in Drosophila was independently confirmed by Northern blot analysis [1] and by cloning [2].  The latter study confirmed the ends of the excised miR. The sequence is localised to chromosome 3R.  Stark et al. [3] have identified targets for miR-2 in Drosophila using computational prediction followed by experimental validation.   miR-2 regulates the proapoptotic genes reaper, grim and sickle, suggesting that it may be involved in the control of apoptosis. 


mirna_acc: MI0000432
mirna_id: dme-mir-iab-4
description: Drosophila melanogaster miR-iab-4 stem-loop
sequence: UCGUAAACGUAUACUGAAUGUAUCCUGAGUGUAUCCUAUCCGGUAUACCUUCAGUAUACGUAACACGA
organism: dme
comment:
iab-4 is a transcript of the Bithorax complex which has been previously shown to contribute to proper formation of abdominal segments [2]. Reference [1] identified a miRNA gene within the transcript and mapped the ends of the mature miR sequence by cloning.  Excised miR sequences were identified from both arms of the precursor and are named miR-iab-4-5p (5') and miR-iab-4-3p (3') as too few sequences were cloned to decide on which was predominantly expressed. 


mirna_acc: MI0000433
mirna_id: hsa-let-7g
description: Homo sapiens let-7g stem-loop
sequence: AGGCUGAGGUAGUAGUUUGUACAGUUUGAGGGUCUAUGAUACCACCCGGUACAGGAGAUAACUGUACAGGCCACUGCCUUGCCA
organism: hsa
comment:
let-7g-3p cloned in [2] has a 1 nt 3' extension (U), which is incompatible with the genome sequence. 


mirna_acc: MI0000434
mirna_id: hsa-let-7i
description: Homo sapiens let-7i stem-loop
sequence: CUGGCUGAGGUAGUAGUUUGUGCUGUUGGUCGGGUUGUGACAUUGCCCGCUGUGGAGAUAACUGCGCAAGCUACUGCCUUGCUA
organism: hsa
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1], later verified in human [2]. 


mirna_acc: MI0000438
mirna_id: hsa-mir-15b
description: Homo sapiens miR-15b stem-loop
sequence: UUGAGGCCUUAAAGUACUGUAGCAGCACAUCAUGGUUUACAUGCUACAGUCAAGAUGCGAAUCAUUAUUUGCUGCUCUAGAAAUUUAAGGAAAUUCAU
organism: hsa
comment:
This miRNA sequence was predicted based on homology to a verified miRNA from mouse [1].  Michael et al. subsequently verified expression of miR-15b in human [2]. 


mirna_acc: MI0000440
mirna_id: hsa-mir-27b
description: Homo sapiens miR-27b stem-loop
sequence: ACCUCUCUAACAAGGUGCAGAGCUUAGCUGAUUGGUGAACAGUGAUUGGUUUCCGCUUUGUUCACAGUGGCUAAGUUCUGCACCUGAAGAGAAGGUG
organism: hsa
comment:
Lagos-Quintana et al. determined the expression of miR-27b in mouse [1] - a human sequence was predicted based on homology.  Michael et al. subsequently verified the expression of this miRNA in human cells [2]. 


mirna_acc: MI0000443
mirna_id: hsa-mir-124-1
previous_mirna_id: hsa-mir-124a-1
description: Homo sapiens miR-124-1 stem-loop
sequence: AGGCCUCUCUCUCCGUGUUCACAGCGGACCUUGAUUUAAAUGUCCAUACAAUUAAGGCACGCGGUGAAUGCCAAGAAUGGGGCUG
organism: hsa
comment:
miR-124 was first identified by cloning studies in mouse [1].  Its expression was later verified in human embryonic stem cells [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000444
mirna_id: hsa-mir-124-2
previous_mirna_id: hsa-mir-124a-2
description: Homo sapiens miR-124-2 stem-loop
organism: hsa
sequence:
AUCAAGAUUAGAGGCUCUGCUCUCCGUGUUCACAGCGGACCUUGAUUUAAUGUCAUACAAUUAAGGCACGCGGUGAAUGCCAAGAGCGGAGCCUACGGCUGCACUUGAA

comment:
miR-124 was first identified by cloning studies in mouse [1].  Its expression was later verified in human embryonic stem cells [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000446
mirna_id: hsa-mir-125b-1
description: Homo sapiens miR-125b-1 stem-loop
sequence: UGCGCUCCUCUCAGUCCCUGAGACCCUAACUUGUGAUGUUUACCGUUUAAAUCCACGGGUUAGGCUCUUGGGAGCUGCGAGUCGUGCU
organism: hsa
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1].  Its expression was later verified in human BC-1 cells [2]. 


mirna_acc: MI0000448
mirna_id: hsa-mir-130a
description: Homo sapiens miR-130a stem-loop
sequence: UGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUG
organism: hsa
comment:
miR-130a was first identified by cloning studies in mouse [1].  Its expression was later verified in human embryonic stem cells [2]. 


mirna_acc: MI0000449
mirna_id: hsa-mir-132
description: Homo sapiens miR-132 stem-loop
organism: hsa
sequence:
CCGCCCCCGCGUCUCCAGGGCAACCGUGGCUUUCGAUUGUUACUGUGGGAACUGGAGGUAACAGUCUACAGCCAUGGUCGCCCCGCAGCACGCCCACGCGC


mirna_acc: MI0000451
mirna_id: hsa-mir-133a-2
description: Homo sapiens miR-133a-2 stem-loop
organism: hsa
sequence:
GGGAGCCAAAUGCUUUGCUAGAGCUGGUAAAAUGGAACCAAAUCGACUGUCCAAUGGAUUUGGUCCCCUUCAACCAGCUGUAGCUGUGCAUUGAUGGCGCCG

comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1] later verified in human [2]. 


mirna_acc: MI0000452
mirna_id: hsa-mir-135a-1
previous_mirna_id: hsa-mir-135-1
description: Homo sapiens miR-135a-1 stem-loop
sequence: AGGCCUCGCUGUUCUCUAUGGCUUUUUAUUCCUAUGUGAUUCUACUGCUCACUCAUAUAGGGAUUGGAGCCGUGGCGCACGGCGGGGACA
organism: hsa
comment:
miR-135a was first identified by cloning studies in mouse [1].  Its expression was later verified in human embryonic stem cells [2]. 


mirna_acc: MI0000453
mirna_id: hsa-mir-135a-2
previous_mirna_id: hsa-mir-135-2
description: Homo sapiens miR-135a-2 stem-loop
organism: hsa
sequence:
AGAUAAAUUCACUCUAGUGCUUUAUGGCUUUUUAUUCCUAUGUGAUAGUAAUAAAGUCUCAUGUAGGGAUGGAAGCCAUGAAAUACAUUGUGAAAAAUCA

comment:
miR-135a was first identified by cloning studies in mouse [1].  Its expression was later verified in human embryonic stem cells [2]. 


mirna_acc: MI0000454
mirna_id: hsa-mir-137
description: Homo sapiens miR-137 stem-loop
organism: hsa
sequence:
GGUCCUCUGACUCUCUUCGGUGACGGGUAUUCUUGGGUGGAUAAUACGGAUUACGUUGUUAUUGCUUAAGAAUACGCGUAGUCGAGGAGAGUACCAGCGGCA


mirna_acc: MI0000456
mirna_id: hsa-mir-140
description: Homo sapiens miR-140 stem-loop
organism: hsa
sequence:
UGUGUCUCUCUCUGUGUCCUGCCAGUGGUUUUACCCUAUGGUAGGUUACGUCAUGCUGUUCUACCACAGGGUAGAACCACGGACAGGAUACCGGGGCACC

comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1].  Its expression was later verified in human [2,3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000457
mirna_id: hsa-mir-141
description: Homo sapiens miR-141 stem-loop
sequence: CGGCCGGCCCUGGGUCCAUCUUCCAGUACAGUGUUGGAUGGUCUAAUUGUGAAGCUCCUAACACUGUCUGGUAAAGAUGGCUCCCGGGUGGGUUC
organism: hsa
comment:
This miRNA sequence was predicted based on homology to a verified miRNA from mouse [1].  Michael et al. subsequently verified expression of miR-141 in human [2]. 


mirna_acc: MI0000458
mirna_id: hsa-mir-142
description: Homo sapiens miR-142 stem-loop
sequence: GACAGUGCAGUCACCCAUAAAGUAGAAAGCACUACUAACAGCACUGGAGGGUGUAGUGUUUCCUACUUUAUGGAUGAGUGUACUGUG
organism: hsa
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1].  Michael et al. verified the expression of a sequence from the 3' arm of this stem-loop (named miR-142-3p here) [2], and both miR-142-5p (from the 5' arm) and miR-142-3p ware later detected in human HL-60 leukemia cells [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000459
mirna_id: hsa-mir-143
description: Homo sapiens miR-143 stem-loop
organism: hsa
sequence:
GCGCAGCGCCCUGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAGUUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGAGAGAAGUUGUUCUGCAGC

comment:
This miRNA sequence was predicted based on homology to a verified miRNA from mouse [1].  Michael et al. subsequently verified expression of miR-143 in human, and demonstrated significantly reduced levels of the miRNA in precancerous and neoplastic colorectal tissue [2].  miR-143 cloned in [3] has a 1 nt 3' extension (A), which is incompatible with the genome sequence. 


mirna_acc: MI0000460
mirna_id: hsa-mir-144
description: Homo sapiens miR-144 stem-loop
sequence: UGGGGCCCUGGCUGGGAUAUCAUCAUAUACUGUAAGUUUGCGAUGAGACACUACAGUAUAGAUGAUGUACUAGUCCGGGCACCCCC
organism: hsa
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1].  The expression of this miRNA has not been verified in human.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000461
mirna_id: hsa-mir-145
description: Homo sapiens miR-145 stem-loop
sequence: CACCUUGUCCUCACGGUCCAGUUUUCCCAGGAAUCCCUUAGAUGCUAAGAUGGGGAUUCCUGGAAAUACUGUUCUUGAGGUCAUGGUU
organism: hsa
comment:
This miRNA sequence was predicted based on homology to a verified miRNA from mouse [1].  Michael et al. subsequently verified expression of miR-145 in human, and demonstrated significantly reduced levels of the miRNA in precancerous and neoplastic colorectal tissue [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000465
mirna_id: hsa-mir-191
description: Homo sapiens miR-191 stem-loop
sequence: CGGCUGGACAGCGGGCAACGGAAUCCCAAAAGCAGCUGUUGUCUCCAGAGCAUUCCAGCUGCGCUUGGAUUUCGUCCCCUGCUCUCCUGCCU
organism: hsa
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1].  The expression of this miRNA was later confirmed in human HL-60 leukemia cells [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000472
mirna_id: hsa-mir-127
description: Homo sapiens miR-127 stem-loop
sequence: UGUGAUCACUGUCUCCAGCCUGCUGAAGCUCAGAGGGCUCUGAUUCAGAAAGAUCAUCGGAUCCGUCUGAGCUUGGCUGGUCGGAAGUCUCAUCAUC
organism: hsa
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1].  The expression of this miRNA was later confirmed by cloning in human cells [2,3]. 


mirna_acc: MI0000473
mirna_id: hsa-mir-129-2
previous_mirna_id: hsa-mir-129b
description: Homo sapiens miR-129-2 stem-loop
sequence: UGCCCUUCGCGAAUCUUUUUGCGGUCUGGGCUUGCUGUACAUAACUCAAUAGCCGGAAGCCCUUACCCCAAAAAGCAUUUGCGGAGGGCG
organism: hsa
comment:
This miRNA sequence was predicted based on homology to a verified miRNA cloned from mouse cerebellum [1].  Expression of this miRNA was subsequently verified in a human osteoblast sarcoma cell line [2]. Reference [2] named the human/mouse conserved sequence miR-129b, but subsequent genome searches suggest that the same mature sequence may be expressed from two predicted hairpin precursors in both human (this entry and MIR:MI0000252) and mouse (MIR:MI0000222 and MIR:MI0000585).  Landgraf et al. show that the 5' product of mir-129-1 (MIR:MI0000222) is the predominant one, whereas both 5' and 3' products are significantly expressed from mir-129-2 (this entry) [3]. 


mirna_acc: MI0000474
mirna_id: hsa-mir-134
description: Homo sapiens miR-134 stem-loop
sequence: CAGGGUGUGUGACUGGUUGACCAGAGGGGCAUGCACUGUGUUCACCCUGUGGGCCACCUAGUCACCAACCCUC
organism: hsa
comment:
miR-134 was first identified by cloning studies in mouse [1].  Its expression was later verified in human embryonic stem cells [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000475
mirna_id: hsa-mir-136
description: Homo sapiens miR-136 stem-loop
sequence: UGAGCCCUCGGAGGACUCCAUUUGUUUUGAUGAUGGAUUCUUAUGCUCCAUCAUCGUCUCAAAUGAGUCUUCAGAGGGUUCU
organism: hsa
comment:
miR-136 was first identified by cloning studies in mouse [1].  Its expression was later verified in human embryonic stem cells [2]. 


mirna_acc: MI0000476
mirna_id: hsa-mir-138-1
description: Homo sapiens miR-138-1 stem-loop
sequence: CCCUGGCAUGGUGUGGUGGGGCAGCUGGUGUUGUGAAUCAGGCCGUUGCCAAUCAGAGAACGGCUACUUCACAACACCAGGGCCACACCACACUACAGG
organism: hsa
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1].  Expression in human was later validated by cloning [2,3]. 


mirna_acc: MI0000477
mirna_id: hsa-mir-146a
previous_mirna_id: hsa-mir-146
description: Homo sapiens miR-146a stem-loop
sequence: CCGAUGUGUAUCCUCAGCUUUGAGAACUGAAUUCCAUGGGUUGUGUCAGUGUCAGACCUCUGAAAUUCAGUUCUUCAGCUGGGAUAUCUCUGUCAUCGU
organism: hsa
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1].  Its expression was later verified in human [2,3]. 


mirna_acc: MI0000482
mirna_id: hsa-mir-185
description: Homo sapiens miR-185 stem-loop
sequence: AGGGGGCGAGGGAUUGGAGAGAAAGGCAGUUCCUGAUGGUCCCCUCCCCAGGGGCUGGCUUUCCUCUGGUCCUUCCCUCCCA
organism: hsa
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1].  Its expression was later verified in human BC-1 cells [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000483
mirna_id: hsa-mir-186
description: Homo sapiens miR-186 stem-loop
sequence: UGCUUGUAACUUUCCAAAGAAUUCUCCUUUUGGGCUUUCUGGUUUUAUUUUAAGCCCAAAGGUGAAUUUUUUGGGAAGUUUGAGCU
organism: hsa
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse.  Expression of this miRNA was also verified in a human osteoblast sarcoma cell line [1].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000484
mirna_id: hsa-mir-188
description: Homo sapiens miR-188 stem-loop
sequence: UGCUCCCUCUCUCACAUCCCUUGCAUGGUGGAGGGUGAGCUUUCUGAAAACCCCUCCCACAUGCAGGGUUUGCAGGAUGGCGAGCC
organism: hsa
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from mouse [1], later verified in human [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0000488
mirna_id: hsa-mir-194-1
previous_mirna_id: hsa-mir-194
description: Homo sapiens miR-194-1 stem-loop
sequence: AUGGUGUUAUCAAGUGUAACAGCAACUCCAUGUGGACUGUGUACCAAUUUCCAGUGGAGAUGCUGUUACUUUUGAUGGUUACCAA
organism: hsa
comment:
This miRNA sequence was predicted based on homology to a verified miRNA from mouse [1].  Michael et al. subsequently verified expression of miR-194 in human [2].  Two putative pairs of orthologous hairpin precursors structures are found in mouse (mir-194-1 (MIR:MI0000236) on chromosome 1, and mir-194-2 (MIR:MI0000733) on chromosome 19) and human (mir-194-1 (MIR:MI0000488) on chromosome 1, and mir-194-2 (MIR:MI0000732) on chromosome 11). 


mirna_acc: MI0000491
mirna_id: cbr-let-7
description: Caenorhabditis briggsae let-7 stem-loop
sequence: ACUGGGGUACGGUGAGGUAGUAGGUUGUAUAGUUUAGAAUAUUACUCUCGGUGAACUAUGCAAGUUUCUACCUCACCGAAUACCAGG
organism: cbr
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1,2].  The expression of this miRNA has not been verified in C. briggsae. 


mirna_acc: MI0000494
mirna_id: cbr-mir-34
description: Caenorhabditis briggsae miR-34 stem-loop
sequence: AAGCACUCAUGGUCGUGAGGCAGUGUGGUUAGCUGGUUGCAUACACAGGUUGACAACGGCUACCUUCACUGCCACCCCGAACAUGUAGUCCUC
organism: cbr
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1].  The expression of this miRNA has not been verified in C. briggsae. 


mirna_acc: MI0000504
mirna_id: cbr-mir-50
description: Caenorhabditis briggsae miR-50 stem-loop
organism: cbr
sequence:
UUCCACCCACCGGCCGCUGAUAUGUCUGAUAUUCUUGGGUUAUCUGAUAAUGAUUGUUGUAACUCAAGUAUUAGACGUAUCGACGGCCGGCUGGGUUGGAA


mirna_acc: MI0000515
mirna_id: cbr-mir-77-1
previous_mirna_id: cbr-mir-77
description: Caenorhabditis briggsae miR-77-1 stem-loop
sequence: GAGCUGUGAAUUUGGAUAGCUGUGCUCUGAGGAAAUAACAAUAGUCACACCCCAUGUCAUUUCAUCAGGCCAUAGCUGUCCAAAUUUCUCGGUUCG
organism: cbr
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1].  The expression of this miRNA has not been verified in C. briggsae.  The hairpin precursor sequence represented here matches two positions on FPC contig 2260 in the C. briggsae genome sequence. 


mirna_acc: MI0000518
mirna_id: cbr-mir-80
description: Caenorhabditis briggsae miR-80 stem-loop
organism: cbr
sequence:
UGGACACUCUUUCGCUCAGCUUUCGACAUGAUUCUAAACAAUACGCUGUCGCAAUGUUGUUGAGAUCAUUAGUUGAAAGCCGAACGAUUCGAGAUAUCCA


mirna_acc: MI0000528
mirna_id: cbr-mir-232-1
previous_mirna_id: cbr-mir-232
description: Caenorhabditis briggsae miR-232-1 stem-loop
sequence: AUUCAAGAUUUCGGAUCUCCGUAGUUUUGACCAUUUUAUCCAACCUAAUAAUGUGAUAAAUGCAUCUUAACUGCGGUGAUCUGGAUUUUGUGAAC
organism: cbr
comment:
This miRNA sequence is predicted based on homology to a verified miRNA from C. elegans [1].  The expression of this miRNA has not been verified in C. briggsae.  The hairpin precursor sequence represented here matches two positions on FPC contig 143 in the C. briggsae genome sequence. 


mirna_acc: MI0000532
mirna_id: cbr-mir-236
description: Caenorhabditis briggsae miR-236 stem-loop
organism: cbr
sequence:
AAGUGACCAAUGUCCAGCGUCUUACCUGUUCAAUAUUUAGACUGACCAAACCCAUAGCUCUAAUACUGUCAGGUAAUGACGCUGGAUAGUCUUGUCAUUG


mirna_acc: MI0000536
mirna_id: cbr-mir-248
description: Caenorhabditis briggsae miR-248 stem-loop
organism: cbr
sequence:
UGCAAACUGAUAUUCACGAUAAGCGCUAUCCUUCCGUUGUAUUCAAGCUUGGUUGUCGAGUACACGUGCUCGGAUAACGCUCAUCGAGUCUGAUCGGUUAUGUU


mirna_acc: MI0000544
mirna_id: ath-MIR319a
description: Arabidopsis thaliana miR319a stem-loop
organism: ath
sequence:
AGAGAGAGCUUCCUUGAGUCCAUUCACAGGUCGUGAUAUGAUUCAAUUAGCUUCCGACUCAUUCAUCCAAAUACCGAGUCGCCAAAAUUCAAACUAGACUCGUUAAAUGAAUGAAUGAUGCGGUAGACAAAUUGGAUCAUUGAUUCUCUUUGAUUGGACUGAAGGGAGCUCCCUCU

comment:
The A. thaliana jaw-D mutant has crinkly leaves and fruits, delayed flowering time and greenish petals.  The jaw-D phenotype is caused by the over-expression of miR319 (also therefore known as miR-JAW), which is produced from a ~500 base long primary transcript RNA [1].  The mir-JAW microRNA is expressed in two forms, 20 and 21 nt, differing by the presence of the 3' terminal U.  Cloned microRNA sequence was obtained from the jaw-D mutant.  This miR has been shown targets TCP genes for cleavage [1].  This sequence is located on BAC F9D16.  miR-JAW has a homologue located in BAC MBK23 (MIR:MI0000545).  The mature excised miR shows sequence similarity to miR159 (MIR:MI0000189, MIR:MI0000218). 


mirna_acc: MI0000545
mirna_id: ath-MIR319b
description: Arabidopsis thaliana miR319b stem-loop
organism: ath
sequence:
AGAGAGCUUUCUUCGGUCCACUCAUGGAGUAAUAUGUGAGAUUUAAUUGACUCUCGACUCAUUCAUCCAAAUACCAAAUGAAAGAAUUUGUUCUCAUAUGGUAAAUGAAUGAAUGAUGCGAGAGACAAAUUGAGUCUUCACUUCUCUAUGCUUGGACUGAAGGGAGCUCCCU

comment:
This sequence is a homologue of miR319a (MIR:MI0000544) -- also called miR-JAW -- and is located on BAC MBK23. 


mirna_acc: MI0000546
mirna_id: mmu-mir-19b-2
previous_mirna_id: mmu-mir-19b
description: Mus musculus miR-19b-2 stem-loop
sequence: ACUUACGAUUAGUUUUGCAGAUUUGCAGUUCAGCGUAUAUGUGAAUAUAUGGCUGUGCAAAUCCAUGCAAAACUGAUUGUGGGA
organism: mmu
comment:
Mouse miR-19b was cloned from mouse tissues by independent groups [1,2]. There are two predicted hairpin precursors, with closely related human homologues [4]: mir-19b-1 (MIR:MI0000718) on chromosome 14, and mir-19b-2 (previously named mir-19b here, MIR:MI0000546) on mouse chromosome X. 


mirna_acc: MI0000548
mirna_id: mmu-mir-30c-2
description: Mus musculus miR-30c-2 stem-loop
sequence: GAGUGACAGAUAUUGUAAACAUCCUACACUCUCAGCUGUGAAAAGUAAGAAAGCUGGGAGAAGGCUGUUUACUCUCUCUGCCUU
organism: mmu
comment:
miR-30c was cloned and mapped to chromosome 4 in reference [1] (MIR:MI0000547).  A search of more recent mouse genome assemblies suggests the presence of a second locus encoding miR-30c on chromosome 1, represented by this entry. 


mirna_acc: MI0000550
mirna_id: mmu-mir-148a
previous_mirna_id: mmu-mir-148
description: Mus musculus miR-148a stem-loop
sequence: AGCCAGUUUGGUCUUUUGAGACAAAGUUCUGAGACACUCCGACUCUGAGUAUGAUAGAAGUCAGUGCACUACAGAACUUUGUCUCUAGAGGCUGUGGUC
organism: mmu
comment:
This sequence was previsouly named mir-148 here and in [1], but is renamed to avoid confusion with mir-148b (MIR:MI0000617).  This sequence maps to mouse chromosome 6. 


mirna_acc: MI0000552
mirna_id: mmu-mir-196a-1
previous_mirna_id: mmu-mir-196-1
description: Mus musculus miR-196a-1 stem-loop
organism: mmu
sequence:
UGAGCCGGGACUGUUGAGUGAAGUAGGUAGUUUCAUGUUGUUGGGCCUGGCUUUCUGAACACAACGACAUCAAACCACCUGAUUCAUGGCAGUUACUGCUUC

comment:
Yekta et al. report that miR-196 miRNAs are expressed from HOX gene clusters in mammals, and that HOX genes in these clusters are targets of miR-196.  Indeed, HOXB8 mRNA was shown to be a natural target for miR-196-directed cleavage through a perfectly complementary miR-target site.  Other HOX genes have imperfect miR-196 complementary sites indicative of regulation by translational repression [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000565
mirna_id: mmu-mir-16-1
description: Mus musculus miR-16-1 stem-loop
sequence: AUGUCAGCGGUGCCUUAGCAGCACGUAAAUAUUGGCGUUAAGAUUCUGAAAUUACCUCCAGUAUUGACUGUGCUGCUGAAGUAAGGUUGGCAA
organism: mmu
comment:
This sequence is a clear homologue of human mir-16 and maps to mouse chromosome 14 [1].  A search of NCBIM30 genome assembly suggests a possible second hairpin precursor for miR-16 (MIR:MI0000566). 


mirna_acc: MI0000567
mirna_id: mmu-mir-18a
previous_mirna_id: mmu-mir-18
description: Mus musculus miR-18a stem-loop
sequence: UGCGUGCUUUUUGUUCUAAGGUGCAUCUAGUGCAGAUAGUGAAGUAGACUAGCAUCUACUGCCCUAAGUGCUCCUUCUGGCAUAAGAAGUUAUGUC
organism: mmu
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000568
mirna_id: mmu-mir-20a
previous_mirna_id: mmu-mir-20
description: Mus musculus miR-20a stem-loop
organism: mmu
sequence:
GUGUGAUGUGACAGCUUCUGUAGCACUAAAGUGCUUAUAGUGCAGGUAGUGUGUAGCCAUCUACUGCAUUACGAGCACUUAAAGUACUGCCAGCUGUAGAACUCCAG


mirna_acc: MI0000572
mirna_id: mmu-mir-24-2
description: Mus musculus miR-24-2 stem-loop
organism: mmu
sequence:
GCCUCUCUCCGGGCUCCGCCUCCCGUGCCUACUGAGCUGAAACAGUUGAUUCCAGUGCACUGGCUCAGUUCAGCAGGAACAGGAGUCCAGCCCCCUAGGAGCUGGCA


mirna_acc: MI0000579
mirna_id: mmu-mir-31
description: Mus musculus miR-31 stem-loop
comment: This sequence maps to mouse chromosome 4.
organism: mmu
sequence:
UGCUCCUGUAACUCGGAACUGGAGAGGAGGCAAGAUGCUGGCAUAGCUGUUGAACUGAGAACCUGCUAUGCCAACAUAUUGCCAUCUUUCCUGUCUGACAGCAGCU


mirna_acc: MI0000583
mirna_id: mmu-mir-96
description: Mus musculus miR-96 stem-loop
organism: mmu
sequence:
CCAGUACCAUCUGCUUGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUGUGAGCAAUCAUGUGUAGUGCCAAUAUGGGAAAAGCGGGCUGCUGC


mirna_acc: MI0000584
mirna_id: mmu-mir-34a
previous_mirna_id: mmu-mir-172;mmu-mir-34c
description: Mus musculus miR-34a stem-loop
organism: mmu
sequence:
CCAGCUGUGAGUAAUUCUUUGGCAGUGUCUUAGCUGGUUGUUGUGAGUAUUAGCUAAGGAAGCAAUCAGCAAGUAUACUGCCCUAGAAGUGCUGCACAUUGU

comment:
Houbaviy et al. cloned this miRNA from embryonic stem cells and named it miR-172 [1].  This sequence is homologous to human miR-34a (MIR:MI0000268), and so is renamed miR-34a here.  This sequence is not related to miR172 from plants (MIR:MI0000215 and MIR:MI0000216).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000585
mirna_id: mmu-mir-129-2
description: Mus musculus miR-129-2 stem-loop
sequence: UGCCUUUCGCGAAUCUUUUUGCGGUCUGGGCUUGCUGUACAUAACUCAAUAGCCGGAAGCCCUUACCCCAAAAAGCAUUCGCGGAGGGCG
organism: mmu
comment:
The miRNA from the 5' arm of this precursor was verified by cloning in mouse [1].  Reference [2] named the human/mouse conserved sequence miR-129b, but subsequent genome searches suggest that the same mature sequence may be expressed from two predicted hairpin precursors in both mouse (this entry and MIR:MI0000222) and human (MIR:MI0000252 and MIR:MI0000473).  Poy et al. independently cloned a mature miRNA from the 3' arm of the precursor, called mmu-miR-129-3p [3].  This sequence is not perfectly conserved in the other predicted mouse miR-129 precursor (MIR:MI0000222).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000586
mirna_id: mmu-mir-98
description: Mus musculus miR-98 stem-loop
organism: mmu
sequence:
CUGCACAUGCUGGGGUGAGGUAGUAAGUUGUAUUGUUGUGGGGUAGGGAUUUUAGGCCCCAGUAAGAAGAUAACUAUACAACUUACUACUUUCCUUGGUGUGUGGCAU


mirna_acc: MI0000587
mirna_id: mmu-mir-103-1
description: Mus musculus miR-103-1 stem-loop
sequence: UUCUUACUGCCCUCGGCUUCUUUACAGUGCUGCCUUGUUGCAUAUGGAUCAAGCAGCAUUGUACAGGGCUAUGAAGGCAUUGAGAC
organism: mmu
comment:
This miRNA sequence was predicted based on homology to a verified miRNA from human [1], and subsequently verified by cloning [2-4]. 


mirna_acc: MI0000588
mirna_id: mmu-mir-103-2
description: Mus musculus miR-103-2 stem-loop
sequence: GUCUUCGUGCUUUCAGCUUCUUUACAGUGCUGCCUUGUAGCAUUCAGGUCAAGCAGCAUUGUACAGGGCUAUGAAAGAACCAAGAA
organism: mmu
comment:
This miRNA sequence was predicted based on homology to a verified miRNA from human [1], and subsequently verified by cloning [2,3]. 


mirna_acc: MI0000589
mirna_id: rno-mir-322
description: Rattus norvegicus miR-322 stem-loop
sequence: CCUCGCUGACUCCGAAGGGAUGCAGCAGCAAUUCAUGUUUUGGAGUAUUGCCAAGGUUCAAAACAUGAAGCGCUGCAACACCCCUUCGUGGGAAA
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. The miR-322 locus has an orthologous sequence in human (MIR:MI0001446), which expresses an experimentally validated mature miRNA sequence from its 5' arm, named miR-424.  The human mir-424 locus does not appear to contain a homolog of the miR-322 sequence.  The mouse ortholog (MIR:MI0000590) appears able to express both miR-322 and miR-424.  Both miR-322 and miR-424 have been experimentally verified in rat.  Landgraf et al. show that the 5' product is the predominant one [3].  The 5' product is therefore renamed miR-322 and the 3' product renamed miR-322*. 


mirna_acc: MI0000590
mirna_id: mmu-mir-322
description: Mus musculus miR-322 stem-loop
sequence: CCUCGUUGACUCCGAAGGGCUGCAGCAGCAAUUCAUGUUUUGGAGUAUUGCCAAGGUUCAAAACAUGAAGCGCUGCAACACCCCUUCGUGGGGAA
organism: mmu
comment:
The mir-322 locus appears able to express two mature miRNA sequences.  Poy et al. cloned a sequence originating from the 5' arm from mouse pancreatic beta cells [2].  This sequence is orthologous to the experimentally validated miR-424 sequence from human (MIR:MI0001446), but was named miR-322-5p in [2].  The mature product from the 3' arm of this precursor sequence is the predicted mouse homologue of miR-322, experimentally verified in rat (MIR:MI0000589) [1], and later in mouse [3].  The orthologous human locus does not appear to contain the miR-322 sequence. Landgraf et al. confirm that the 5' product is the predominant one [4]. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000592
mirna_id: mmu-mir-323
description: Mus musculus miR-323 stem-loop
sequence: UUGGUACUUGGAGAGAGGUGGUCCGUGGCGCGUUCGCUUCAUUUAUGGCGCACAUUACACGGUCGACCUCUUUGCGGUAUCUAAUC
organism: mmu
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA is predicted based on homology to the verified rat sequence (MIR:MI0000591).  Seitz et al. independently predicted the miRNA hairpin precursor sequence by conservation between mouse and human [2]. Landgraf et al. later cloned and sequenced mature products from both arms of the predicted hairpin [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000593
mirna_id: rno-mir-301a
previous_mirna_id: rno-mir-301
description: Rattus norvegicus miR-301a stem-loop
organism: rno
sequence:
CCUGCUGGCUACUGCUGACGACUGCUCUGACUUUAUUGCACUACUGUACUGUACAGCUAGCAGUGCAAUAGUAUUGUCAAAGCAUCCGGGAGCAGGCUAC

comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This rat miRNA has an independently verified homologue in mouse (MIR:MI0000401).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000595
mirna_id: mmu-mir-324
description: Mus musculus miR-324 stem-loop
sequence: AACUGACUAUGCCUCCUCGCAUCCCCUAGGGCAUUGGUGUAAAGCUGGAGACCCACUGCCCCAGGUGCUGCUGGGGGUUGUAGUCUGAC
organism: mmu
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA is predicted based on homology to the verified rat sequence (MIR:MI0000594) - expression of miRNAs from both arms was later independently verified in mouse [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The predominant miR-324-3p clone has a 3' terminal U residue, which is incompatible with the genome sequence [3]. 


mirna_acc: MI0000601
mirna_id: rno-let-7d
description: Rattus norvegicus let-7d stem-loop
sequence: UGGGCUCCUAGGAAGAGGUAGUAGGUUGCAUAGUUUUAGGGCAGAGAUUUUGCCCACAAGGAGUUAACUAUACGACCUGCUGCCUUUCUUAGGGCCUU
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons, including the sequence identical to the miRNA cloned from the reverse strand of mouse let-7d (MIR:MI0000405), named let-7* [1].  The predicted precursor sequence from a newer assembly of the rat genome also contains the let-7d sequence in the 5' arm.  The let-7d* sequence published in [1] had an extra 3' A residue, which conflicts with the sequence of the precursor shown here.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000603
mirna_id: mmu-mir-328
description: Mus musculus miR-328 stem-loop
sequence: CUGUCUCGGAGCCUGGGGCAGGGGGGCAGGAGGGGCUCAGGGAGAAAGUAUCUACAGCCCCUGGCCCUCUCUGCCCUUCCGUCCCCUGUCCCCAAGU
organism: mmu
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA is predicted based on homology to the verified rat sequence (MIR:MI0000602) - its expression was later independently verified in mouse [2]. 


mirna_acc: MI0000604
mirna_id: rno-mir-329
description: Rattus norvegicus miR-329 stem-loop
sequence: UGUUCGCUUCUGGUACCGGAAGAGAGGUUUUCUGGGUCUCUGUUUCUUUGAUGAGAAUGAAACACACCCAGCUAACCUUUUUUUCAGUAUCAAAUCC
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This rat miRNA has a predicted homologue in mouse (MIR:MI0000605). 


mirna_acc: MI0000605
mirna_id: mmu-mir-329
description: Mus musculus miR-329 stem-loop
sequence: UGUUCGCUUCUGGUACCGGAAGAGAGGUUUUCUGGGUCUCUGUUUCUUUGAUGAGAAUGAAACACACCCAGCUAACCUUUUUUUCAGUAUCAAAUCC
organism: mmu
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA is predicted based on homology to the verified rat sequence (MIR:MI0000604).  Seitz et al. independently predicted the miRNA hairpin precursor sequence by conservation between mouse and human [2]. Landgraf et al. verified expression by cloining [3]. 


mirna_acc: MI0000606
mirna_id: rno-mir-330
description: Rattus norvegicus miR-330 stem-loop
sequence: ACCCUUUGGCGAUCUCUGCCUCUCUGGGCCUGUGUCUUAGGCUCUUCAAGAUCUAACGAGCAAAGCACAGGGCCUGCAGAGAGGUAGCGCUCUGCUC
organism: rno
comment:
The mature miRNA originating from the 3' arm reported in [1] contains an extra 3' A residue, which conflicts with the precursor sequence shown here.  Landgraf et al. show that the 5' miRNA is the predominant one [2]. The 3' mature sequence is renamed miR-300* here. 


mirna_acc: MI0000608
mirna_id: rno-mir-331
description: Rattus norvegicus miR-331 stem-loop
sequence: GAGUCUGGUCUUGUUUGGGUUUGUUCUAGGUAUGGUCCCAGGGAUCCCAGAUCAAACCAGGCCCCUGGGCCUAUCCUAGAACCAACCUAAACCCAU
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This rat miRNA has a predicted homologue in mouse (MIR:MI0000609). 


mirna_acc: MI0000611
mirna_id: rno-mir-140
description: Rattus norvegicus miR-140 stem-loop
sequence: GUGUCUCUCUCUGUGUCCUGCCAGUGGUUUUACCCUAUGGUAGGUUACAUCAUGCUGUUCUACCACAGGGUAGAACCACGGACAGGAUACUGGAGCACC
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. The cloned miRNA appears to be expressed from the 3' strand of the precursor, and is therefore named miR-140* here.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000615
mirna_id: mmu-mir-337
description: Mus musculus miR-337 stem-loop
sequence: CAGUGUAGUGAGAAGUUGGGGGGUGGGAACGGCGUCAUGCAGGAGUUGAUUGCACAGCCAUUCAGCUCCUAUAUGAUGCCUUUCUUCACCCCCUUCA
organism: mmu
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA is predicted based on homology to the verified rat sequence (MIR:MI0000614).  Seitz et al. later predicted a cluster of 40 miRNAs in the imprinted human 14q32 domain, and confirmed the expression of a subset by Northern blot or primer extension in mouse [2].  Landgraf et al. later cloned and sequenced mature products from both arms of the hairpin, named here miR-337-5p and miR-337-3p [3]. 


mirna_acc: MI0000620
mirna_id: rno-mir-339
description: Rattus norvegicus miR-339 stem-loop
sequence: ACGGGGUGGACACCGUCCCUGUCCUCCAGGAGCUCACGUAUGCCUGCCUGUGAGCGCCUCGACGACAGAGCCAGAGUCCACCCCUGCACUGCCCAA
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. The miR-339-5p sequence reported in [1] contains two 3' terminal U residues, which conflict with the precursor sequence shown here.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000621
mirna_id: mmu-mir-339
description: Mus musculus miR-339 stem-loop
sequence: ACGGGGUGGCCACUAUCCCUGUCCUCCAGGAGCUCACGUAUGCCUGCCUGUGAGCGCCUCGGCGACAGAGCCGGUGUCCACCCCUGCACUGUCCAC
organism: mmu
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [1]. 


mirna_acc: MI0000624
mirna_id: rno-mir-341
description: Rattus norvegicus miR-341 stem-loop
sequence: AAAAUGAUGAUGUCAGUUGGCCGGUCGGCCGAUCGCUCGGUCUGUCAGUCAGUCGGUCGGUCGAUCGGUCGGUCGGUCAGUCGGCUUCCUGUCUUC
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000625
mirna_id: mmu-mir-341
description: Mus musculus miR-341 stem-loop
sequence: AAAAUGAUGAUGUCAGUUGGCCGGUCGGCCGAUCGCUCGGUCUGUCAGUCAGUCGGUCGGUCGAUCGGUCGGUCGGUCAGUCGGCUUCCUGUCUUC
organism: mmu
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA is predicted based on homology to the verified rat sequence (MIR:MI0000624) - its expression was later verified in mouse [2]. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000626
mirna_id: rno-mir-342
description: Rattus norvegicus miR-342 stem-loop
sequence: GAAAAUGGGCUCAAGGUGAGGGGUGCUAUCUGUGAUUGAGGGACAUGGUCAAUGGAAUUGUCUCACACAGAAAUCGCACCCGUCACCUUGGCCUGCUGA
organism: rno
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000627
mirna_id: mmu-mir-342
description: Mus musculus miR-342 stem-loop
sequence: GAAAAUGGGCUCAAGGUGAGGGGUGCUAUCUGUGAUUGAGGGACAUGGUCAAUGGAAUUGUCUCACACAGAAAUCGCACCCGUCACCUUGGCCUGCUGA
organism: mmu
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA is predicted based on homology to the verified rat sequence (MIR:MI0000626).  Seitz et al. independently predicted the miRNA hairpin precursor sequence by conservation between mouse and human [2]. Landgraf et al. later cloned and sequenced mature products from both arms of the predicted hairpin [3].  The mature sequences shown here represent the most commonly cloned forms from large-scale cloning studies [3]. 


mirna_acc: MI0000628
mirna_id: rno-mir-343
description: Rattus norvegicus miR-343 stem-loop
sequence: GCACCUUCAUGGACCUGGAGUAGAGUGGGUGUGGCGGGGGGAGCAGGGCCCAGGGCAACCUCUCCCUCCGUGUGCCCAGAUCCUGCAUGCCAA
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. The sequence reported in [1] contains a 3' terminal UU sequence, which conflicts with the precursor sequence shown here. 


mirna_acc: MI0000630
mirna_id: mmu-mir-344-1
previous_mirna_id: mmu-mir-344
description: Mus musculus miR-344-1 stem-loop
sequence: CUGCAGCCAGGGUUUUUACCAGUCAGGCUCCUGGCUAGAUUCCAGGUACCAGCUGGUACCUGAUCUAGCCAAAGCCUGACUGUAAGCCCUGAACA
organism: mmu
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA is predicted based on homology to the verified rat sequence (MIR:MI0000629) - its expression was later independently verified in mouse [2]. 


mirna_acc: MI0000632
mirna_id: mmu-mir-345
description: Mus musculus miR-345 stem-loop
sequence: ACCCAAGUCCAGGCCUGCUGACCCCUAGUCCAGUGCUUGUGGUGGCUACUGGGCCCUGAACUAGGGGUCUGGAGACCUGGGUUUGAUCUCCACAGG
organism: mmu
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA was predicted based on homology to the verified rat sequence (MIR:MI0000631).  Seitz et al. independently predicted the miRNA hairpin precursor sequence by conservation between mouse and human [2]. Landgraf et al. later verified mature miRNA expression from both arms of the hairpin precursor [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000633
mirna_id: rno-mir-346
description: Rattus norvegicus miR-346 stem-loop
sequence: UCUGUGUUGGGCAUCUGUCUGCCUGAGUGCCUGCCUCUCUGUUGCUCUGAAGGAGGCAGGGGCUGGGCCUGCAGCUGCCUGGGCAGAGCUGCUCCUUC
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. The sequence reported in [1] contains two 3' terminal A residues, which conflict with the precursor sequence shown here. 


mirna_acc: MI0000634
mirna_id: mmu-mir-346
description: Mus musculus miR-346 stem-loop
sequence: UCUGUGUUGGGCGUCUGUCUGCCCGAGUGCCUGCCUCUCUGUUGCUCUGAAGGAGGCAGGGGCUGGGCCUGCAGCUGCCUGGGCAGAGCUGCUCCUUC
organism: mmu
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA is predicted based on homology to the verified rat sequence (MIR:MI0000633) - its expression has not been verified in mouse. The sequence reported in [1] contains two 3' terminal A residues, which conflict with the precursor sequence shown here. 


mirna_acc: MI0000637
mirna_id: rno-mir-129-2
previous_mirna_id: rno-mir-129
description: Rattus norvegicus miR-129-2 stem-loop
sequence: AGACUGCCCUUCGCGAAUCUUUUUGCGGUCUGGGCUUGCUGUACAUAACUCAAUAGCCGGAAGCCCUUACCCCAAAAAGCAUUCGCGGAGGGCGCGC
organism: rno
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The ends of the miRNA may be offset with respect to previous annotations.  Kim et al [1] and He et al [4] both identify the mature product from the 3' arm, named miR-129* here. 


mirna_acc: MI0000639
mirna_id: rno-mir-350
description: Rattus norvegicus miR-350 stem-loop
sequence: AGAUGCCUUGCUCCUACAAGAGUAAAGUGCACGUGCUUUGGGACAGUGAGGAAAAUAAUGUUCACAAAGCCCAUACACUUUCACCCUUUAGGAGAGUUG
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This rat miRNA has a predicted homologue in mouse (MIR:MI0000640).  The sequence reported in [1] contains a 5' terminal A residue, which conflicts with the precursor sequence shown here. 


mirna_acc: MI0000640
mirna_id: mmu-mir-350
description: Mus musculus miR-350 stem-loop
sequence: AGAUGCCUUGCUCCUACAAGAGUAAAGUGCAUGCGCUUUGGGACAGUGAGGAAAAUAAUGUUCACAAAGCCCAUACACUUUCACCCUUUAGGAGAGUUG
organism: mmu
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA is predicted based on homology to the verified rat sequence (MIR:MI0000639) - its expression was later independently verified in mouse [2].  The sequence reported in [1] contains a 5' terminal A residue, which conflicts with the precursor sequence shown here.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000641
mirna_id: rno-mir-7a-1
previous_mirna_id: rno-mir-7;rno-mir-7-1
description: Rattus norvegicus miR-7a-1 stem-loop
sequence: UGUUGGCCUAGUUCUGUGUGGAAGACUAGUGAUUUUGUUGUUUUUAGAUAACUAAGACGACAACAAAUCACAGUCUGCCAUAUGGCACAGGCCACCU
organism: rno
comment:
Landgraf et al. show that the 5' product is the predominant one [3].  The 3' product is renamed miR-7a*.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000642
mirna_id: rno-mir-351
description: Rattus norvegicus miR-351 stem-loop
sequence: CAUGGCACCUCCAUUUCCCUGAGGAGCCCUUUGAGCCUGAGGUGAAAAAAAAACAGGUCAAGAGGCGCCUGGGAACUGGAG
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. The sequence reported in [1] contains a 3' terminal U residue, which conflicts with the precursor sequence shown here.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000643
mirna_id: mmu-mir-351
description: Mus musculus miR-351 stem-loop
sequence: CAUGGCACCUCCGUUUCCCUGAGGAGCCCUUUGAGCCUGGAGUGAAAAAAAAAAACAGGUCAAGAGGCGCCUGGGAACUGGAGAAGAGUGUUAAACUUC
organism: mmu
comment:
The predominant miRNA cloned by Langraf et al. has a 3' terminal U residue, which is incompatible with the genome sequence [1]. 


mirna_acc: MI0000644
mirna_id: rno-mir-352
description: Rattus norvegicus miR-352 stem-loop
sequence: GUACAUAUGUUGAAGAUUAUUAAUAUAUAGAGUGGGUGUUGUGGUGGUAGUAUGAUAUGUAGAGUAGUAGGUUGCAUAGUACGAUGUAGUGUAUGA
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. miR-352 is closely related to let-7d (a single deletion), but the predicted hairpin precursor sequences are unrelated, and express their mature forms from opposite strands. 


mirna_acc: MI0000647
mirna_id: rno-mir-151
description: Rattus norvegicus miR-151 stem-loop
sequence: AGCGCUUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCCUCCCUACUAGACUGAGGCUCCUUGAGGACAGGGAUCGUCAUACUCACCUCCCG
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. Landgraf et al show that the 5' product is the predominant one [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000648
mirna_id: rno-mir-101b
description: Rattus norvegicus miR-101b stem-loop
sequence: AUCUGAGACUGAACUGUCCUUUUUCGGUUAUCAUGGUACCGAUGCUGUAGAUCUGAAAGGUACAGUACUGUGAUAGCUGAAGAAUGGUGGUGCCAUC
organism: rno
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000649
mirna_id: mmu-mir-101b
description: Mus musculus miR-101b stem-loop
sequence: AUCUGAGACUGAACUGCCCUUUUUCGGUUAUCAUGGUACCGAUGCUGUAGCUCUGAAAGGUACAGUACUGUGAUAGCUGAAGAAUGGCGGUGCCAUC
organism: mmu
comment:
Kim et al. cloned 40 new miRNAs from rat E18 primary cortical neurons [1]. This mouse miRNA is predicted based on homology to the verified rat sequence (MIR:MI0000648) -- expression in mouse was verified independently [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000653
mirna_id: osa-MIR156a
description: Oryza sativa miR156a stem-loop
organism: osa
sequence:
GGAGGGUGACAGAAGAGAGUGAGCACACGUGGUUGUUUCCUUGCAUAAAUGAUGCCUAUGCUUGGAGCUACGCGUGCUCACUUCUCUCUCUGUCACCUCC

comment:
The stem-loop sequence represented here is predicted based on homology to miRNAs cloned from Arabidopsis [1].  Its expression has not been verified in rice. 


mirna_acc: MI0000654
mirna_id: osa-MIR156b
description: Oryza sativa miR156b stem-loop
organism: osa
sequence:
UUGUCUUGAGAGGGGAAGAGAUCUCUAUGGGUUUUGGAGGUCUGACAGAAGAGAGUGAGCACACACGGUGCUUUCUUAGCAUGCAAGAGCCAUGCUGGGAGCUGUGCGUGCUCACUCUCUAUCUGUCAGCCGUUCACCAUGCCCAAUAUGAUUAAUCUCCUUCUCUCAGUUGACAG


mirna_acc: MI0000655
mirna_id: osa-MIR156c
description: Oryza sativa miR156c stem-loop
organism: osa
sequence:
GGAGGAAGAGAGGGGUGAGAGGUGAGGCUGACAGAAGAGAGUGAGCACACAUGGUGACUUUCUUGCAUGCUGAAUGGACUCAUGCUUGAAGCUAUGUGUGCUCACUUCUCUCUCUGUCAGCCAUUUGAUCUCUCUUUCUCUCUUUCUCC


mirna_acc: MI0000656
mirna_id: osa-MIR156d
description: Oryza sativa miR156d stem-loop
organism: osa
sequence:
GGAGAAGCUCUCAUGAGAUUGACAGAAGAGAGUGAGCACACGGCGUGAUGGCCGGCAUAAAAUCUAUCCCGUCCUCGCCGCGUGCUCACUCCUCUUUCUGUCACCCUCUUUCUCUCAGGGCUCAACUCC

comment:
The stem-loop sequence represented here is predicted based on homology to miRNAs cloned from Arabidopsis [1].  Its expression has not been verified in rice. 


mirna_acc: MI0000657
mirna_id: osa-MIR156e
description: Oryza sativa miR156e stem-loop
organism: osa
sequence:
GGCGCGAGGUGACAGAAGAGAGUGAGCACACGGCCGGGCGUGACGGCACCGGCGGGCGUGCCGUCGCGGCCGCGUGCUCACUGCUCUUUCUGUCAUCCGGUGCC

comment:
The stem-loop sequence represented here is predicted based on homology to miRNAs cloned from Arabidopsis [1].  Its expression has not been verified in rice. 


mirna_acc: MI0000658
mirna_id: osa-MIR156f
description: Oryza sativa miR156f stem-loop
organism: osa
sequence:
AGUUGACAGAAGAGAGUGAGCACACAGCGGCCAGACUGCAUCGAUCUAUCAAUCUUCCCUUCGACAGGAUAGCUAGAUAGAAAGAAAGAGAGGCCGUCGGCGGCCAUGGAAGAGAGAGAGAGAGAGAGAUGAAAUGAUGAUGAUGAUACAGCUGCCGCUGCGUGCUCACUUCUCUUUCUGUCAGCU


mirna_acc: MI0000659
mirna_id: osa-MIR156g
description: Oryza sativa miR156g stem-loop
organism: osa
sequence:
GGCUGACAGAAGAGAGUGAGCACACAGCGGGCAGACUGCAUCUGAAUUACCUGUUGCGACGAAGAAGACGACGGACGCAGCUUGCCGUUGCGUGCUCACUUCUCUCUCUGUCAGCU


mirna_acc: MI0000660
mirna_id: osa-MIR156h
description: Oryza sativa miR156h stem-loop
organism: osa
sequence:
GAGAUUGUUGACAGAAGAGAGUGAGCACACGGCGCGGCGGCUAGCCAUCGGCGGGAUGCCUGCCCCCGCCGCGUGCUCGCUCCUCUUUCUGUCAGCAUCUC


mirna_acc: MI0000662
mirna_id: osa-MIR156j
description: Oryza sativa miR156j stem-loop
organism: osa
sequence:
UUGGGGCGGGGCGGGAUCGAGCAUAUGAAAGGCGAGAUUGUUGACAGAAGAGAGUGAGCACACGGCGCGGCGGCUAGCCAUCGGCGGGAUGCCUGCCCCCGCCGCGUGCUCGCUCCUCUUUCUGUCAGCAUCUCUCAUCACUCCCUCCCGCAUCCCCCGCCCCGA


mirna_acc: MI0000664
mirna_id: osa-MIR160b
description: Oryza sativa miR160b stem-loop
organism: osa
sequence:
AAGGUUUGGUUUUGAUCGGCUUGAGAGCGUGCCUGGCUCCCUGUAUGCCACUCAUGUAGCCCAAUCCAUGGUGUGUUUGGAUGCUGUGGGUGGCGUGCAAGGAGCCAAGCAUGCGUGCCAUGAUCUCUCUUUCUGCCUU


mirna_acc: MI0000666
mirna_id: osa-MIR160d
description: Oryza sativa miR160d stem-loop
organism: osa
sequence:
GGGGAUAUGCCUGGCUCCCUGUAUGCCACUCGCGUAGCUGCCAAACUCAGUUGAAACAACUGCCUUCUCCCGGCGAGAUUCAGGCAUUGUGUUCGUACGUUUGGCUCUACUGCGGAUGGCGUGCGAGGAGCCAAGCAUGACC


mirna_acc: MI0000667
mirna_id: osa-MIR162a
previous_mirna_id: osa-MIR162
description: Oryza sativa miR162a stem-loop
organism: osa
sequence:
GGUGAUGCCUGGGCGCAGUGGUUUAUCGAUCCCUUCCCUGCCUUGUGGCGCUGAUCCAGGAGCGGCGAAUUUCUUUGAGAGGGUGUUCUUUUUUUUUCUUCCUUUUGGUCCUUGUUGCAGCCAACGACAACGCGGGAAUCGAUCGAUAAACCUCUGCAUCCAGUUCUCGCC


mirna_acc: MI0000668
mirna_id: osa-MIR164a
description: Oryza sativa miR164a stem-loop
organism: osa
sequence:
GUGAGAAGGACCGCGUUGGAGAAGCAGGGCACGUGCAUGCAUAUGUUCAUCAUCAUCUUCUUCCUCCUCCUCUAGCUCCAGCCUUGUGUGGGUUGGAAGUUUAGAUAGAACUCGCACUGCACGUGGUCUCCUUCUCCAUCCCGGUCUUUUUCUCAC


mirna_acc: MI0000669
mirna_id: osa-MIR164b
description: Oryza sativa miR164b stem-loop
organism: osa
sequence:
GUGCACGGUGGAGAAGCAGGGCACGUGCAUUACCAUCCACUCGCCUGCCGGCCGCCGGCCGCCAUUGCCAUGGAUGGUUCUUCAUGUGCCCGUCUUCUCCACCGAGCAC


mirna_acc: MI0000670
mirna_id: osa-MIR166a
description: Oryza sativa miR166a stem-loop
organism: osa
sequence:
UGAAGCUAUUUGCUUCUGAGUGGAAUGUUGUCUGGUUCAAGGUCUCAUGCACCUUGCGGUUUUGAGGAUGAUUUGUGCAAGGUUUUUCAUUCCUCUCAUCCGUGGGAUCUCGGACCAGGCUUCAUUCCCCUCAGAGAUAGCUUCA


mirna_acc: MI0000671
mirna_id: osa-MIR166b
description: Oryza sativa miR166b stem-loop
organism: osa
sequence:


mirna_acc: MI0000672
mirna_id: osa-MIR166c
description: Oryza sativa miR166c stem-loop
organism: osa
sequence:
GGCAGUUGAGGGGAAUGUUGUCUGGUCCGAGACCUAACACCGGGCGGAAUGGCGGAUUCAGCUGCAGCUAAGCAAGCUAGGUGGGGGGUUUCGGACCAGGCUUCAUUCCCCCCAACUCAACUGUU


mirna_acc: MI0000673
mirna_id: osa-MIR166d
description: Oryza sativa miR166d stem-loop
organism: osa
sequence:
GAAGCUUUUUCACUUUGAGGGGAAUGUUGUCUGGCUCGAGGUGCAUGGAGAAACCUCUGAUCGAUCAGGUUUGAUCUGUAGAGACUGAUCUCGGACCAGGCUUCAUUCCCCUCAAGUAAAGCUCC


mirna_acc: MI0000674
mirna_id: osa-MIR166e
description: Oryza sativa miR166e stem-loop
organism: osa
sequence:
UGUUUCUGGGUGGAAUGUUGUCUGGUUCAAGGCCCCUUAGGAUGUGUGAUUUUUGAUGGUUUAUGCAUUCAUCUUGAUGCGAACAUCUAUCUCGGAUCUUUGGGUUCUCGAACCAGGCUUCAUUCCCCUCAGAGAUA


mirna_acc: MI0000675
mirna_id: osa-MIR166f
description: Oryza sativa miR166f stem-loop
organism: osa
sequence:
CGAUCAUCUUGUUGAGAGGAAUGUCGUCUGGCCUGAGAUCGUACCACAGUGGUGGGUACACGUGGACGGUCUCGGACCAGGCUUCAUUCCCCUCAACAACUCGUCGG


mirna_acc: MI0000676
mirna_id: osa-MIR167a
description: Oryza sativa miR167a stem-loop
organism: osa
sequence:
UAGUGUGAAUGAGUGAAGCUGCCAGCAUGAUCUAGCUCUGAUUAAUCGGCACUGUUGGCGUACAGUCGAUUGACUAAUCGUCAGAUCUGUGUGUGUAAAUCACUGUUAGAUCAUGCAUGACAGCCUCAUUUCUUCACACUG


mirna_acc: MI0000677
mirna_id: osa-MIR167b
description: Oryza sativa miR167b stem-loop
organism: osa
sequence:
GUGCCCAAGAGAAAGCGUGAAGCUGCCAGCAUGAUCUAACUUGCAGACAAGAAAUCAGCUCAGCUCGCUGGUUUCGAACAGGAAGGCGGCUAGCUGAGGCUUCUUCUGAGUACGUGAUGGUUAGAUCAUGCUGUGACAGUUUCACUCCUUCCCUGUUGGGCAC


mirna_acc: MI0000678
mirna_id: osa-MIR167c
description: Oryza sativa miR167c stem-loop
organism: osa
sequence:
UGUCCAAGGGAACGAGUGAAGCUGCCAGCAUGAUCUAGCUCUGAAUGAUCAACAAGAUGUGCUCCCACACUGCCUUCCUGUGGAUCUUGAGCUGUUGCUAGUCUUGUGGUCAUGCCUUGCUAGGUCAUGCUGCGGCAGCCUCACUUCUUCCCAUUGUUGGGCA


mirna_acc: MI0000679
mirna_id: osa-MIR169a
previous_mirna_id: osa-MIR169
description: Oryza sativa miR169a stem-loop
organism: osa
sequence:
CGCCGGCGGCCUGACAUUGGGAUCGGAGGCCAUGGUGCAGCCAAGGAUGACUUGCCGAUCGAUCGAUCUAUCUAUGAAGCUAAGCUAGCUGGCCAUGGAUCCAUCCAUCAAUUGGCAAGUUGUUCUUGGCUACAUCUUGGCCCCUGCUCCUCAUGUAAGGCCGGCCUGUGGCG


mirna_acc: MI0000681
mirna_id: hsa-mir-155
description: Homo sapiens miR-155 stem-loop
sequence: CUGUUAAUGCUAAUCGUGAUAGGGGUUUUUGCCUCCAACUGACUCCUACAUAUUAGCAUUAACAG
organism: hsa
comment:
Human mir-155 is predicted based on homology to a cloned miR from mouse (MIR:MI0000177) [1], and later experimentally validated in human HL-60 leukemia cells [2].  Like the mouse miRNA, human mir-155 resides in the non-coding BIC transcript (EMBL:AF402776), located on chromosome 21 [3]. The mature form differs from that in mouse at a single position.  Eis et al. confirm that miR-155 is processed from the BIC transcript in human, and demonstrate elevated expression of miR-155 in lymphoma samples [4]. The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5]. 


mirna_acc: MI0000684
mirna_id: mmu-mir-107
description: Mus musculus miR-107 stem-loop
sequence: UUCUCUGUGCUUUCAGCUUCUUUACAGUGUUGCCUUGUGGCAUGGAGUUCAAGCAGCAUUGUACAGGGCUAUCAAAGCACAGAGAGC
organism: mmu
comment:
Mouse mir-107 is predicted [2] based on homology to a cloned miR from human (MIR:MI0000114) [1], and later verified in mouse [3,4]. 


mirna_acc: MI0000685
mirna_id: mmu-mir-10a
previous_mirna_id: mmu-mir-10a-1
description: Mus musculus miR-10a stem-loop
organism: mmu
sequence:
GACCUGUCUGUCUUCUGUAUAUACCCUGUAGAUCCGAAUUUGUGUAAGGAAUUUUGUGGUCACAAAUUCGUAUCUAGGGGAAUAUGUAGUUGACAUAAACACUCCGCUCA


mirna_acc: MI0000687
mirna_id: mmu-mir-17
description: Mus musculus miR-17 stem-loop
sequence: GUCAGAAUAAUGUCAAAGUGCUUACAGUGCAGGUAGUGAUGUGUGCAUCUACUGCAGUGAGGGCACUUGUAGCAUUAUGCUGAC
organism: mmu
comment:
Mouse mir-17 is predicted [4] based on homology to a cloned miR from human (MIR:MI0000071) [1,2].  miRNAs derived from the 5' [1] and 3' [2] arms of the human mir-17 precursor have been reported.  Landgraf et al. show that the 5' product is the predominant one [5].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5]. 


mirna_acc: MI0000689
mirna_id: mmu-mir-25
description: Mus musculus miR-25 stem-loop
sequence: GGCCAGUGUUGAGAGGCGGAGACUUGGGCAAUUGCUGGACGCUGCCCUGGGCAUUGCACUUGUCUCGGUCUGACAGUGCCGGCC
organism: mmu
comment:
Mouse mir-25 is predicted [3] based on homology to a cloned miR from human (MIR:MI0000082) [1].  Its expression has been later independently verified in mouse [2,4]. 


mirna_acc: MI0000690
mirna_id: mmu-mir-28a
previous_mirna_id: mmu-mir-28
description: Mus musculus miR-28 stem-loop
sequence: GGUCCCUACCUUCAAGGAGCUCACAGUCUAUUGAGUUGCCUUUCUGAUUCUCCCACUAGAUUGUGAGCUGCUGGAGGGCAGGCACU
organism: mmu
comment:
Mouse mir-28 is predicted [2] based on homology to a cloned miR from human (MIR:MI0000086) [1].  Its expression was later verified by cloning [3]. 


mirna_acc: MI0000691
mirna_id: mmu-mir-32
description: Mus musculus miR-32 stem-loop
sequence: GGAGAUAUUGCACAUUACUAAGUUGCAUGUUGUCACGGCCUCAAUGCAAUUUAGUGUGUGUGAUAUUUUC
organism: mmu
comment:
Mouse mir-32 is predicted [3] based on homology to a cloned miR from human (MIR:MI0000090) [1].  Its expression in mouse was later independently verified [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000692
mirna_id: mmu-mir-100
description: Mus musculus miR-100 stem-loop
sequence: CCUGUUGCCACAAACCCGUAGAUCCGAACUUGUGCUGAUUCUGCACACAAGCUUGUGUCUAUAGGUAUGUGUCUGUUAGG
organism: mmu
comment:
Mouse mir-100 is predicted [2] based on homology to a cloned miR from human (MIR:MI0000102) [1].  Its expression was later verified in mouse [3]. 


mirna_acc: MI0000694
mirna_id: mmu-mir-200c
description: Mus musculus miR-200c stem-loop
sequence: CCCUCGUCUUACCCAGCAGUGUUUGGGUGCUGGUUGGGAGUCUCUAAUACUGCCGGGUAAUGAUGGAGG
organism: mmu
comment:
Mouse mir-200c is predicted [3] based on homology to a cloned miR from human (MIR:MI0000650) [1].  Its expression in mouse was later verified independently [2,4].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000695
mirna_id: mmu-mir-210
description: Mus musculus miR-210 stem-loop
organism: mmu
sequence:
CCGGGGCAGUCCCUCCAGGCUCAGGACAGCCACUGCCCACCGCACACUGCGUUGCUCCGGACCCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGAACC

comment:
Mouse mir-210 is predicted [3] based on homology to a reported miR from human (MIR:MI0000286) [1].  Its expression in mouse was later verified independently [2,4]. 


mirna_acc: MI0000698
mirna_id: mmu-mir-214
description: Mus musculus miR-214 stem-loop
organism: mmu
sequence:
GGCCUGGCUGGACAGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCGCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCU

comment:
Mouse mir-214 is predicted [2] based on homology to a reported miR from human (MIR:MI0000290) [1].  Its expression was later verified by cloning [3]. 


mirna_acc: MI0000699
mirna_id: mmu-mir-216a
previous_mirna_id: mmu-mir-216
description: Mus musculus miR-216a stem-loop
sequence: UUGGUUUAAUCUCAGCUGGCAACUGUGAGAUGUCCCUAUCAUUCCUCACAGUGGUCUCUGGGAUUAUGCUAA
organism: mmu
comment:
Mouse mir-216 is predicted [2] based on homology to a reported miR from human (MIR:MI0000292) [1].  Its expression was later verified by cloning [3]. 


mirna_acc: MI0000700
mirna_id: mmu-mir-218-1
description: Mus musculus miR-218-1 stem-loop
organism: mmu
sequence:
GUGAUAAUGGAGCGAGAUUUUCUGUUGUGCUUGAUCUAACCAUGUGCUUGCGAGGUAUGAGAAAAACAUGGUUCCGUCAAGCACCAUGGAACGUCACGCAGCUUUCUACA

comment:
Mouse miR-218 is predicted [2] based on homology to a reported miR from human (MIR:MI0000294) [1].  Its expression was later verified by cloning [3]. 


mirna_acc: MI0000701
mirna_id: mmu-mir-218-2
description: Mus musculus miR-218-2 stem-loop
organism: mmu
sequence:
GACCAGUUGCCGCGGGGCUUUCCUUUGUGCUUGAUCUAACCAUGUGGUGGAACGAUGGAAACGGAACAUGGUUCUGUCAAGCACCGCGGAAAGCAUCGCUCUCUCCUGCA

comment:
Mouse miR-218 is predicted [2] based on homology to a reported miR from human (MIR:MI0000295) [1].  Its expression was later verified by cloning [3]. 


mirna_acc: MI0000702
mirna_id: mmu-mir-219-1
description: Mus musculus miR-219-1 stem-loop
organism: mmu
sequence:
CCGUCCCGGGCCGCGGCUCCUGAUUGUCCAAACGCAAUUCUCGAGUCUCUGGCUCCGGCCGAGAGUUGCGUCUGGACGUCCCGAGCCGCCGCCCCCAAACCUCGAGGGGG

comment:
Mouse mir-219 is predicted [2] based on homology to a reported miR from human (MIR:MI0000296) [1].  Its expression was later verified in mouse [3]. 


mirna_acc: MI0000703
mirna_id: mmu-mir-223
description: Mus musculus miR-223 stem-loop
organism: mmu
sequence:
UCUGGCCAUCUGCAGUGUCACGCUCCGUGUAUUUGACAAGCUGAGUUGGACACUCUGUGUGGUAGAGUGUCAGUUUGUCAAAUACCCCAAGUGUGGCUCAUGCCUAUCAG

comment:
Mouse mir-223 is predicted [2] based on homology to a reported miR from human (MIR:MI0000300) [1].  Its expression was later verified by cloning [3]. 


mirna_acc: MI0000704
mirna_id: mmu-mir-320
description: Mus musculus miR-320 stem-loop
sequence: GCCUCGCCGCCCUCCGCCUUCUCUUCCCGGUUCUUCCCGGAGUCGGGAAAAGCUGGGUUGAGAGGGCGAAAAAGGAUGUGGG
organism: mmu
comment:
Mouse mir-320 is predicted [2] based on homology to a cloned miR from human (MIR:MI0000542) [1].  Its expression was later verified in mouse [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000706
mirna_id: mmu-mir-26a-2
description: Mus musculus miR-26a-2 stem-loop
sequence: GGCUGCGGCUGGAUUCAAGUAAUCCAGGAUAGGCUGUGUCCGUCCAUGAGGCCUGUUCUUGAUUACUUGUUUCUGGAGGCAGCG
organism: mmu
comment:
This sequence is a second predicted hairpin precursor for miR-26a (MIR:MI0000573), conserved in human [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5]. 


mirna_acc: MI0000707
mirna_id: mmu-mir-33
description: Mus musculus miR-33 stem-loop
sequence: CUGUGGUGCAUUGUAGUUGCAUUGCAUGUUCUGGCAAUACCUGUGCAAUGUUUCCACAGUGCAUCACGG
organism: mmu
comment:
Mouse mir-33 is predicted [2] based on homology to a cloned miR from human (MIR:MI0000091) [1].  Its expression was later verified by cloning [3]. 


mirna_acc: MI0000708
mirna_id: mmu-mir-211
description: Mus musculus miR-211 stem-loop
organism: mmu
sequence:
CUGCUUGGACCUGUGACCUGUGGGCUUCCCUUUGUCAUCCUUUGCCUAGGCCUCUGAGUGAGGCAAGGACAGCAAAGGGGGGCUCAGUGGUCACCUCUACUGCAGA

comment:
Mouse mir-211 is predicted [2] based on homology to a reported miR from human (MIR:MI0000287) [1].  Its expression has not been verified in mouse. The mature miR differs from the human sequence at a single base.  This sequence maps to mouse chromosome 7. 


mirna_acc: MI0000709
mirna_id: mmu-mir-221
description: Mus musculus miR-221 stem-loop
sequence: AUCCAGGUCUGGGGCAUGAACCUGGCAUACAAUGUAGAUUUCUGUGUUUGUUAGGCAACAGCUACAUUGUCUGCUGGGUUUCAGGCUACCUGGAA
organism: mmu
comment:
Mouse mir-221 is predicted [2] based on homology to a reported miR from human (MIR:MI0000298) [1].  Its expression was later verified by cloning [3]. 


mirna_acc: MI0000710
mirna_id: mmu-mir-222
description: Mus musculus miR-222 stem-loop
sequence: CCCUCAGUGGCUCAGUAGCCAGUGUAGAUCCUGUCUUUGGUAAUCAGCAGCUACAUCUGGCUACUGGGUCUCUGGUGGC
organism: mmu
comment:
Mouse mir-222 is predicted [2] based on homology to a reported miR from human (MIR:MI0000299) [1].  Its expression was later verified in mouse by cloning [3]. 


mirna_acc: MI0000711
mirna_id: mmu-mir-224
description: Mus musculus miR-224 stem-loop
sequence: GGGCUUUUAAGUCACUAGUGGUUCCGUUUAGUAGAUGGUUUGUGCAUUGUUUCAAAAUGGUGCCCUAGUGACUACAAAGCCC
organism: mmu
comment:
Mouse mir-224 is predicted [2] based on homology to a cloned miR from human (MIR:MI0000301) [1].  Its expression was later verified by cloning [3]. 


mirna_acc: MI0000713
mirna_id: mmu-mir-199a-2
description: Mus musculus miR-199a-2 stem-loop
organism: mmu
sequence:
UGGAAGCUUCAGGAGAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGGCCAGCA

comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000714
mirna_id: mmu-mir-199b
description: Mus musculus miR-199b stem-loop
organism: mmu
sequence:
CCAGAGGAUACCUCCACUCCGUCUACCCAGUGUUUAGACUACCUGUUCAGGACUCCCAAAUUGUACAGUAGUCUGCACAUUGGUUAGGCUGGGCUGGGUUAGACCCUCGG

comment:
Mouse miR-199b is predicted based on homology with the previously identified human miR-199b (MIR:MI0000282) [1,2].  Landgraf et al. later showed that the 3' product is the predominant one [3]. 


mirna_acc: MI0000715
mirna_id: mmu-mir-135a-2
previous_mirna_id: mmu-mir-135-2
description: Mus musculus miR-135a-2 stem-loop
organism: mmu
sequence:
AGAUAAAUUCACUCUAGUGCUUUAUGGCUUUUUAUUCCUAUGUGAUCGUAAUAAAGUCUCAUGUAGGGAUGGAAGCCAUGAAAUACAUUGUGAAAAUUCA


mirna_acc: MI0000716
mirna_id: mmu-mir-124-1
previous_mirna_id: mmu-mir-124a-1
description: Mus musculus miR-124-1 stem-loop
sequence: AGGCCUCUCUCUCCGUGUUCACAGCGGACCUUGAUUUAAAUGUCCAUACAAUUAAGGCACGCGGUGAAUGCCAAGAAUGGGGCUG
organism: mmu
comment:
miR-124 was cloned from mouse brain [1] and embryonic stem cells [2] by independent groups.  There are 3 predicted precursor hairpin sequences: mir-124-1 (MIR:MI0000716) on chromosome 14, mir-124-2 (MIR:MI0000717) on chromosome 3, and mir-124-3 (previously known as miR-124 here, MIR:MI0000150) on chromosome 2.  All have closely related predicted human homologues (MIR:MI0000443, MIR:MI0000444 and MIR:MI0000445). Lagos-Quintana et al. also report a mature miRNA sequence miR-124b, with a G insertion at position 12 [1].  miR-124b is not found in either the mouse or human genome assemblies. 


mirna_acc: MI0000717
mirna_id: mmu-mir-124-2
previous_mirna_id: mmu-mir-124a-2
description: Mus musculus miR-124-2 stem-loop
organism: mmu
sequence:
AUCAAGAUCAGAGACUCUGCUCUCCGUGUUCACAGCGGACCUUGAUUUAAUGUCAUACAAUUAAGGCACGCGGUGAAUGCCAAGAGCGGAGCCUACGGCUGCACUUGAA

comment:
miR-124 was cloned from mouse brain [1] and embryonic stem cells [2] by independent groups.  There are 3 predicted precursor hairpin sequences: mir-124-1 (MIR:MI0000716) on chromosome 14, mir-124-2 (MIR:MI0000717) on chromosome 3, and mir-124-3 (previously known as miR-124 here, MIR:MI0000150) on chromosome 2.  All have closely related predicted human homologues (MIR:MI0000443, MIR:MI0000444 and MIR:MI0000445). Lagos-Quintana et al. also report a mature miRNA sequence miR-124b, with a G insertion at position 12 [1].  miR-124b is not found in either the mouse or human genome assemblies. 


mirna_acc: MI0000719
mirna_id: mmu-mir-92a-1
previous_mirna_id: mmu-mir-92-1
description: Mus musculus miR-92a-1 stem-loop
sequence: CUUUCUACACAGGUUGGGAUUUGUCGCAAUGCUGUGUUUCUCUGUAUGGUAUUGCACUUGUCCCGGCCUGUUGAGUUUGG
organism: mmu
comment:
The predominant miR-92 form cloned by Landgraf et al. has a additional 3' U residue, which is compatible with this precursor sequence, but not with that of mir-92-2 (MIR:MI0000580) [4]. 


mirna_acc: MI0000723
mirna_id: mmu-mir-181b-1
previous_mirna_id: mmu-mir-181b
description: Mus musculus miR-181b-1 stem-loop
sequence: AGGUCACAAUCAACAUUCAUUGCUGUCGGUGGGUUGAACUGUGUAGAAAAGCUCACUGAACAAUGAAUGCAACUGUGGCC
organism: mmu
comment:
Mouse miR-181b was predicted by computational methods using conservation with human and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and independently in mouse [2,3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000724
mirna_id: mmu-mir-181c
description: Mus musculus miR-181c stem-loop
sequence: GCCAAGGGUUUGGGGGAACAUUCAACCUGUCGGUGAGUUUGGGCAGCUCAGACAAACCAUCGACCGUUGAGUGGACCCCGAGGCCUGGA
organism: mmu
comment:
Mouse miR-181c was predicted by computational methods using conservation with human and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish and independently in mouse [2,3]. 


mirna_acc: MI0000728
mirna_id: mmu-mir-7a-1
previous_mirna_id: mmu-mir-7-1
description: Mus musculus miR-7a-1 stem-loop
organism: mmu
sequence:
UUGGAUGUUGGCCUAGUUCUGUGUGGAAGACUAGUGAUUUUGUUGUUUUUAGAUAACUAAAACGACAACAAAUCACAGUCUGCCAUAUGGCACAGGCCACCUCUACAG

comment:
miR-7a (previously named miR-7) was predicted by computational methods using conservation between mouse, human and Fugu rubripes sequences [1]. Expression of the excised miR has been validated in zebrafish, and later independently verified in mouse [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000730
mirna_id: mmu-mir-7b
description: Mus musculus miR-7b stem-loop
organism: mmu
sequence:
AGGAGCGGAGUACGUGAGCCAGUGCUAUGUGGAAGACUUGUGAUUUUGUUGUUCUGAUAUGAUAUGACAACAAGUCACAGCCAGCCUCAUAGCGUGGACUCCUAUCACCUU

comment:
miR-7 was predicted by computational methods using conservation between mouse, human and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR.  This sequence represents the mouse homologue of human mir-7-3 -- the derived mature form differs at a single position from that expressed from mir-7-1 (MIR:MI0000728) and mir-7-2 (MIR:MI0000729) in mouse, and mir-7-1 (MIR:MI0000263), mir-7-2 (MIR:MI0000264) and mir-7-3 (MIR:MI0000265) in human.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies in mouse [2]. 


mirna_acc: MI0000731
mirna_id: mmu-mir-217
description: Mus musculus miR-217 stem-loop
organism: mmu
sequence:
AAACAUAGUCAUUACAGUUUUUGAUGUUGCAGAUACUGCAUCAGGAACUGACUGGAUAAGACUUAAUCCCCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACAA

comment:
This miRNA was predicted by computational methods using conservation in with human, mouse and Fugu rubripes [1].  Expression of the excised miR has been validated in zebrafish, and the ends mapped by cloning.  The mature mouse and human (MIR:MI0000293) sequences differ at a single position [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies in mouse [3]. 


mirna_acc: MI0000736
mirna_id: hsa-mir-30c-1
description: Homo sapiens miR-30c-1 stem-loop
sequence: ACCAUGCUGUAGUGUGUGUAAACAUCCUACACUCUCAGCUGUGAGCUCAAGGUGGCUGGGAGAGGGUUGUUUACUCCUUCUGCCAUGGA
organism: hsa
comment:
miR-30c was cloned from mouse heart and brain tissues by Lagos-Quintana et al. [1].  Two human hairpin precursor sequences are predicted based on homology with the mouse sequences, on chromosomes 1 (MIR:MI0000736) and 6 (MIR:MI0000254) [3].  Expression of miR-30c was later validated in human HL-60 leukemia cells [2]. 


mirna_acc: MI0000737
mirna_id: hsa-mir-200a
description: Homo sapiens miR-200a stem-loop
sequence: CCGGGCCCCUGUGAGCAUCUUACCGGACAGUGCUGGAUUUCCCAGCUUGACUCUAACACUGUCUGGUAACGAUGUUCAAAGGUGACCCGC
organism: hsa
comment:
miR-200a was cloned from mouse kidney tissue [1], and expression later confirmed by cloning in human [3]. 


mirna_acc: MI0000740
mirna_id: hsa-mir-219-2
description: Homo sapiens miR-219-2 stem-loop
sequence: ACUCAGGGGCUUCGCCACUGAUUGUCCAAACGCAAUUCUUGUACGAGUCUGCGGCCAACCGAGAAUUGUGGCUGGACAUCUGUGGCUGAGCUCCGGG
organism: hsa
comment:
This human miRNA was predicted by computational methods using conservation with mouse and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR [2].  The mature products were later verified in human [3].  Two hairpin precursor structures are predicted, mir-219-1 on chromosome 6 (MIR:MI0000296) and mir-219-2 on chromosome 9 (MIR:MI0000740) [2]. 


mirna_acc: MI0000742
mirna_id: hsa-mir-34b
description: Homo sapiens miR-34b stem-loop
sequence: GUGCUCGGUUUGUAGGCAGUGUCAUUAGCUGAUUGUACUGUGGUGGUUACAAUCACUAACUCCACUGCCAUCAAAACAAGGCAC
organism: hsa
comment:
Houbaviy et al. cloned 3 closely related sequences from mouse embryonic stem cells [1], and named them miR-34a, miR-34b and miR-172.  These names have been remapped to miR-34c (MIR:MI0000403), miR-34b (MIR:MI0000404) and miR-34a (MIR:MI0000584) to clarify homology with human sequences.  The predominant mature miRNA in human is expressed from the 3' arm (in contrast to previous annotation) [2].  Both arms express mature products in mouse. 


mirna_acc: MI0000744
mirna_id: hsa-mir-299
description: Homo sapiens miR-299 stem-loop
sequence: AAGAAAUGGUUUACCGUCCCACAUACAUUUUGAAUAUGUAUGUGGGAUGGUAAACCGCUUCUU
organism: hsa
comment:
The sequence from the 5' arm of this miRNA precursor is the predicted human homologue of mouse miR-299, cloned from mouse embryonic stem cells [1,2], later validated in human [4].  Altuvia et al [3] report the cloning of a miRNA sequence from the 3' arm of the same precursor in human. 


mirna_acc: MI0000745
mirna_id: hsa-mir-301a
previous_mirna_id: hsa-mir-301
description: Homo sapiens miR-301a stem-loop
sequence: ACUGCUAACGAAUGCUCUGACUUUAUUGCACUACUGUACUUUACAGCUAGCAGUGCAAUAGUAUUGUCAAAGCAUCUGAAAGCAGG
organism: hsa
comment:
This sequence is the predicted human homologue of mouse miR-301, cloned from mouse embryonic stem cells [1,3].  Its expression has also been confirmed in human ES cells [2]. 


mirna_acc: MI0000746
mirna_id: hsa-mir-99b
description: Homo sapiens miR-99b stem-loop
sequence: GGCACCCACCCGUAGAACCGACCUUGCGGGGCCUUCGCCGCACACAAGCUCGUGUCUGUGGGUCCGUGUC
organism: hsa
comment:
This sequence is the predicted human homologue of mouse miR-99b, cloned from mouse brain [1] and embryonic stem cells [2,3].  Its expression was later validated in human [4-6]. 


mirna_acc: MI0000747
mirna_id: hsa-mir-296
description: Homo sapiens miR-296 stem-loop
sequence: AGGACCCUUCCAGAGGGCCCCCCCUCAAUCCUGUUGUGCCUAAUUCAGAGGGUUGGGUGGAGGCUCUCCUGAAGGGCUCU
organism: hsa
comment:
This sequence is the predicted human homologue of mouse miR-296 cloned from mouse embryonic stem cells [1,3].  Its expression has also been verified in human ES cells [2]. 


mirna_acc: MI0000748
mirna_id: hsa-mir-130b
description: Homo sapiens miR-130b stem-loop
sequence: GGCCUGCCCGACACUCUUUCCCUGUUGCACUACUAUAGGCCGCUGGGAAGCAGUGCAAUGAUGAAAGGGCAUCGGUCAGGUC
organism: hsa
comment:
This sequence is the predicted human homologue of mouse miR-130b cloned from mouse embryonic stem cells [1,2].  Its expression was later verified in human BC-1 cells [3]. 


mirna_acc: MI0000749
mirna_id: hsa-mir-30e
description: Homo sapiens miR-30e stem-loop
sequence: GGGCAGUCUUUGCUACUGUAAACAUCCUUGACUGGAAGCUGUAAGGUGUUCAGAGGAGCUUUCAGUCGGAUGUUUACAGCGGCAGGCUGCCA
organism: hsa
comment:
This sequence is the predicted human homologue of mouse miR-30e [1,2,4]. Mature products from both arms of the precursor (hsa-miR-30e-5p and hsa-miR-30e-3p) were later independently verified in human myelocytic leukemia (HL-60) cells [3].  Landgraf et al. later showed that the 5' product is the predominant one [5].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5]. 


mirna_acc: MI0000750
mirna_id: hsa-mir-26a-2
description: Homo sapiens miR-26a-2 stem-loop
sequence: GGCUGUGGCUGGAUUCAAGUAAUCCAGGAUAGGCUGUUUCCAUCUGUGAGGCCUAUUCUUGAUUACUUGUUUCUGGAGGCAGCU
organism: hsa
comment:
miR-26a was cloned from HeLa cells [1].  Two predicted hairpin precursor sequences are present on chromosome 3 (MIR:MI0000083) and 12 (MIR:MI0000750), each with homologues in mouse (MIR:MI0000573 and MIR:MI0000706).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [6]. 


mirna_acc: MI0000751
mirna_id: cbr-mir-72
description: Caenorhabditis briggsae miR-72 stem-loop
organism: cbr
sequence:
UGGACUCGCCCGAGCUAGGCAGAUGUUGGCAUAGCUGAAUGCAAAUCAGAAAUCGAAAUUCGAAAAGUUUGAAUUUCGCGCGCUCAGCUUCGCCACAUCGUGCCAUGCGUAGGCUUGAGACCA

comment:
This sequence is the predicted C. briggsae homologue of a miRNA cloned from C. elegans (MIR:MI0000043) (Uwe Ohler, pers. comm.). 


mirna_acc: MI0000752
mirna_id: cel-mir-353
description: Caenorhabditis elegans miR-353 stem-loop
organism: cel
sequence:
UGUUGAAGUAUUGCAAAAGCAAAGGACGGGCACAAUUGCCAUGUGUUGGUAUUAUUGCUUCAAGUUAUUUGAAGCUGUAAUAUCAAUAAGCAUGUCUCGUGUGAAGUCCG

comment:
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing.  The 5' end of the mature sequence ws mapped by PCR, but the 3' ends have not been experimentally determined. 


mirna_acc: MI0000753
mirna_id: cel-mir-354
description: Caenorhabditis elegans miR-354 stem-loop
organism: cel
sequence:
CAGAGCCGACUAAGCACCUUGGUGCGGCUGCAGACGGGUAUCCGGCUCGACGUUCAUACAUCACGACUUCUUUCCUUUUACCUUGUUUGUUGCUGCUCCUAUUGGUUUUG

comment:
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing.  The 5' end of the mature sequence ws mapped by PCR, but the 3' ends have not been experimentally determined. 


mirna_acc: MI0000754
mirna_id: cel-mir-355
description: Caenorhabditis elegans miR-355 stem-loop
organism: cel
sequence:
AAUAAUGUCAAGAAUUGAAUGGUUUGUUUUAGCCUGAGCUAUGAGUCAUCGGAAUAUGCAUAGCUUCUUGCUAAAACAUGCCAAUCAAUCUUAAUUGACGAAGUUUUUGA

comment:
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing [1].  The 5' end of the mature sequence was mapped by PCR, and the 3' end confirmed later [2]. 


mirna_acc: MI0000755
mirna_id: cel-mir-356a
previous_mirna_id: cel-mir-356
description: Caenorhabditis elegans miR-356 stem-loop
organism: cel
sequence:
UAAAGUUUCCUUGAGAACAAUGUGGUUGAGCAACGCGAACAAAUCAUCAAUGUAAAUUUCAGCGGAUUCGUUACGACGUGUCUCACCACAUCGUUAGUAGGAUUUCAGAA

comment:
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing.  The 5' end of the mature sequence ws mapped by PCR, but the 3' ends have not been experimentally determined. 


mirna_acc: MI0000756
mirna_id: cel-mir-357
description: Caenorhabditis elegans miR-357 stem-loop
organism: cel
sequence:
ACGCUGUACUACUCACCAGCGGAUCCCUACAACGCUGCGCAUAUGCAUGAACACAAUGAAAAUGUAAAUGCCAGUCGUUGCAGGAGUUCGCAUACAGUAGUAAAAUGCGC

comment:
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing [1].  The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [2]. 


mirna_acc: MI0000757
mirna_id: cel-mir-358
description: Caenorhabditis elegans miR-358 stem-loop
organism: cel
sequence:
AAACUCGCGACGGCUGGCGACCUGGCCAGGCAUUCCAACUGUCAAACUUACAAAGCUUUCUCGACAAUUGGUAUCCCUGUCAAGGUCUCAAUCCGUUCAGCGAAUUCGUU

comment:
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing [1].  The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [2]. 


mirna_acc: MI0000758
mirna_id: cel-mir-359
description: Caenorhabditis elegans miR-359 stem-loop
organism: cel
sequence:
AAUGCUCCUUGAAAUUUCAAUCGUUAGAGUAACACACAGUUACACGACCUCAUCAAUCGUGUCACUGGUCUUUCUCUGACGAAUUGAAGUUCUGGAGACAAUUUUGGUUG

comment:
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing [1].  The extents of the dominant mature miRNA species are adjusted here in accordance with a large scale cloning and sequencing study [2]. 


mirna_acc: MI0000759
mirna_id: cel-mir-360
description: Caenorhabditis elegans miR-360 stem-loop
organism: cel
sequence:
CAUUCUGUUAGGAAGCAUCAAUGUGUUGUGACCGUUGUUACGGUCAAUUUGCAAAUUGAAAAAAUGACCGUAAUCCCGUUCACAAUACAUUGUUCGUUUUCUCCAAAGGU


mirna_acc: MI0000767
mirna_id: hsa-mir-365a
previous_mirna_id: hsa-mir-365-1
description: Homo sapiens miR-365a stem-loop
sequence: ACCGCAGGGAAAAUGAGGGACUUUUGGGGGCAGAUGUGUUUCCAUUCCACUAUCAUAAUGCCCCUAAAAAUCCUUAUUGCUCUUGCA
organism: hsa
comment:
Xie et al. [1] refer to this sequence by the internal identifier MIR245. The sequence is unrelated to C. elegans mir-245 (MIR:MI0000321). 


mirna_acc: MI0000769
mirna_id: hsa-mir-365b
previous_mirna_id: hsa-mir-365-2
description: Homo sapiens miR-365b stem-loop
organism: hsa
sequence:
AGAGUGUUCAAGGACAGCAAGAAAAAUGAGGGACUUUCAGGGGCAGCUGUGUUUUCUGACUCAGUCAUAAUGCCCCUAAAAAUCCUUAUUGUUCUUGCAGUGUGCAUCGGG

comment:
Xie et al. [1] refer to this sequence by the internal identifier MIR190. The sequence is unrelated to mammalian mir-190 (MIR:MI0000486). 


mirna_acc: MI0000774
mirna_id: hsa-mir-302d
description: Homo sapiens miR-302d stem-loop
sequence: CCUCUACUUUAACAUGGAGGCACUUGCUGUGACAUGACAAAAAUAAGUGCUUCCAUGUUUGAGUGUGG
organism: hsa
comment:
Human miR-302a (MIR:MI0000738), miR-302b (MIR:MI0000772), miR-302c (MIR:MI0000773), miR-302d (MIR:MI0000774) and miR-367 (MIR:MI0000775) are clustered on chromosome 4. 


mirna_acc: MI0000776
mirna_id: hsa-mir-376c
previous_mirna_id: hsa-mir-368
description: Homo sapiens miR-376c stem-loop
sequence: AAAAGGUGGAUAUUCCUUCUAUGUUUAUGUUAUUUAUGGUUAAACAUAGAGGAAAUUCCACGUUUU
organism: hsa
comment:
This miRNA has been named both miR-368 and miR376c in the literature, and previously here.  The mature miR-376c product has been shown to be modified by A to I edits [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000779
mirna_id: hsa-mir-371a
previous_mirna_id: hsa-mir-371
description: Homo sapiens miR-371a stem-loop
sequence: GUGGCACUCAAACUGUGGGGGCACUUUCUGCUCUCUGGUGAAAGUGCCGCCAUCUUUUGAGUGUUAC
organism: hsa
comment:
Human miR-371 (MIR:MI0000779), miR-372 (MIR:MI0000780) and miR-373 (MIR:MI0000781) are clustered within 1.1kb on chromosome 19.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000786
mirna_id: hsa-mir-378a
previous_mirna_id: hsa-mir-378
description: Homo sapiens miR-378a stem-loop
sequence: AGGGCUCCUGACUCCAGGUCCUGUGUGUUACCUAGAAAUAGCACUGGACUUGGAGUCAGAAGGCCU
organism: hsa
comment:
miR-422b was the most abundant miRNA cloned from human promyelocytic leukemia (HL-60) cells [2].  The sequence originates from the opposite arm of the human homologue of previously identified mouse mir-378 [1]. Landgraf et al. show that the 3' product (previously called miR-422b) is the predominant one [3].  Further, mir-378 and mir-422a loci are unrelated.  miR-422b is thus renamed miR-378 here.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000793
mirna_id: mmu-mir-376a
description: Mus musculus miR-376a stem-loop
sequence: UAAAAGGUAGAUUCUCCUUCUAUGAGUACAAUAUUAAUGACUAAUCGUAGAGGAAAAUCCACGUUUUC
organism: mmu
comment:
Seitz et al. predicted a cluster of 40 miRNAs in the imprinted human 14q32 domain, and confirmed the expression of a subset by Northern blot or primer extension in mouse [1].  The expression of miR-376a was independently verified by Poy et al. [2].  The mature miR-376a products have been shown to be modified by A to I edits [4].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [5]. 


mirna_acc: MI0000797
mirna_id: mmu-mir-380
description: Mus musculus miR-380 stem-loop
sequence: AAGAUGGUUGACCAUAGAACAUGCGCUACUUCUGUGUCGUAUGUAGUAUGGUCCACAUCUU
organism: mmu
comment:
Seitz et al. predicted a cluster of 40 miRNAs in the imprinted human 14q32 domain, and confirmed the expression of a subset by Northern blot or primer extension in mouse, including a sequence from the 3' arm of this precursor [1].  Poy et al. cloned a sequence from the 5' arm from mouse pancreatic beta cell line MIN6 [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000802
mirna_id: hsa-mir-340
description: Homo sapiens miR-340 stem-loop
sequence: UUGUACCUGGUGUGAUUAUAAAGCAAUGAGACUGAUUGUCAUAUGUCGUUUGUGGGAUCCGUCUCAGUUACUUUAUAGCCAUACCUGGUAUCUUA
organism: hsa
comment:
This sequence is the predicted homologue of a miRNA cloned from rat neuronal tissue [1,2].  Landgraf et al. show that the 5' product is the predominant one in human, mouse and rat [3], in contrast to the previous annotation.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000803
mirna_id: hsa-mir-330
description: Homo sapiens miR-330 stem-loop
sequence: CUUUGGCGAUCACUGCCUCUCUGGGCCUGUGUCUUAGGCUCUGCAAGAUCAACCGAGCAAAGCACACGGCCUGCAGAGAGGCAGCGCUCUGCCC
organism: hsa
comment:
This sequence is the predicted homologue of a miRNA cloned from rat neuronal tissue [1,2], later verified in human [3]. 


mirna_acc: MI0000805
mirna_id: hsa-mir-342
description: Homo sapiens miR-342 stem-loop
sequence: GAAACUGGGCUCAAGGUGAGGGGUGCUAUCUGUGAUUGAGGGACAUGGUUAAUGGAAUUGUCUCACACAGAAAUCGCACCCGUCACCUUGGCCUACUUA
organism: hsa
comment:
This sequence was predicted by homology to a rat miRNA [1,2] and later verified in human [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000806
mirna_id: hsa-mir-337
description: Homo sapiens miR-337 stem-loop
sequence: GUAGUCAGUAGUUGGGGGGUGGGAACGGCUUCAUACAGGAGUUGAUGCACAGUUAUCCAGCUCCUAUAUGAUGCCUUUCUUCAUCCCCUUCAA
organism: hsa
comment:
This sequence was predicted based on homology with a verified rat miRNA [1,2], and later confirmed in human [3]. 


mirna_acc: MI0000808
mirna_id: hsa-mir-326
description: Homo sapiens miR-326 stem-loop
sequence: CUCAUCUGUCUGUUGGGCUGGAGGCAGGGCCUUUGUGAAGGCGGGUGGUGCUCAGAUCGCCUCUGGGCCCUUCCUCCAGCCCCGAGGCGGAUUCA
organism: hsa
comment:
This sequence is the predicted homologue of a miRNA cloned from rat neuronal tissue [1,2], later verified in human [3].  miR-326 cloned in [3] has a 1 nt 3' extension (U), which is incompatible with the genome sequence. 


mirna_acc: MI0000809
mirna_id: hsa-mir-151a
previous_mirna_id: hsa-mir-151
description: Homo sapiens miR-151a stem-loop
sequence: UUUCCUGCCCUCGAGGAGCUCACAGUCUAGUAUGUCUCAUCCCCUACUAGACUGAAGCUCCUUGAGGACAGGGAUGGUCAUACUCACCUC
organism: hsa
comment:
This sequence is the predicted homologue of a miRNA cloned from rat neuronal tissue [1,2], later verified in human [3,4].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000811
mirna_id: hsa-mir-148b
description: Homo sapiens miR-148b stem-loop
sequence: CAAGCACGAUUAGCAUUUGAGGUGAAGUUCUGUUAUACACUCAGGCUGUGGCUCUCUGAAAGUCAGUGCAUCACAGAACUUUGUCUCGAAAGCUUUCUA
organism: hsa
comment:
This sequence is the predicted homologue of a miRNA cloned from rat neuronal tissue [1,2].  Its expression was later verified in human [3,4]. 


mirna_acc: MI0000813
mirna_id: hsa-mir-324
description: Homo sapiens miR-324 stem-loop
sequence: CUGACUAUGCCUCCCCGCAUCCCCUAGGGCAUUGGUGUAAAGCUGGAGACCCACUGCCCCAGGUGCUGCUGGGGGUUGUAGUC
organism: hsa
comment:
This sequence is the predicted homologue of a miRNA cloned from rat neuronal tissue [1,2].  Expression of the miRNA from the 3' arm of the hairpin was later verified in human BC-1 cells [3].  The 5' end of the miRNA may be offset with respect to previous annotations.  miR-324-3p cloned in [4] has a 1 nt 3' extension (U), which is incompatible with the genome sequence. 


mirna_acc: MI0000814
mirna_id: hsa-mir-338
description: Homo sapiens miR-338 stem-loop
sequence: UCUCCAACAAUAUCCUGGUGCUGAGUGAUGACUCAGGCGACUCCAGCAUCAGUGAUUUUGUUGAAGA
organism: hsa
comment:
This sequence is the predicted homologue of a miRNA cloned from rat neuronal tissue [1,2], later verified in human [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0000815
mirna_id: hsa-mir-339
description: Homo sapiens miR-339 stem-loop
sequence: CGGGGCGGCCGCUCUCCCUGUCCUCCAGGAGCUCACGUGUGCCUGCCUGUGAGCGCCUCGACGACAGAGCCGGCGCCUGCCCCAGUGUCUGCGC
organism: hsa
comment:
This sequence is the predicted homologue of a miRNA cloned from rat neuronal tissue [1,3].  Expression of mature miRNA was later verified in human [2,4].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0000819
mirna_id: cel-mir-392
description: Caenorhabditis elegans miR-392 stem-loop
organism: cel
sequence:
UUUUUGAAAAUCUCGCAGACGUGUUCAGUCAGCAUUCGUGGUUGAGGAUAUCGAACACAAAAAAAGAUAUCAUCGAUCACGUGUGAUGACAGAUUUUCUGCGACUAACAG

comment:
This miRNA was predicted by computational analysis of C. elegans and C. briggsae, and expression of the mature microRNA confirmed by PCR amplification, cloning and sequencing [1].  The 5' end of the mature sequence was mapped by PCR, and the 3' end confirmed later [2]. 


mirna_acc: MI0000820
mirna_id: mmu-mir-133a-2
description: Mus musculus miR-133a-2 stem-loop
organism: mmu
sequence:
AGAAGCCAAAUGCUUUGCUGAAGCUGGUAAAAUGGAACCAAAUCAGCUGUUGGAUGGAUUUGGUCCCCUUCAACCAGCUGUAGCUGCGCAUUGAUCACGCCGCA

comment:
This mature miRNA sequence was named miR-133 in reference [1], and renamed miR-133a on subsequent identification of a homologue differing at the terminal 3' position (MIR:MI0000821).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000821
mirna_id: mmu-mir-133b
description: Mus musculus miR-133b stem-loop
organism: mmu
sequence:
CCUCCAAAGGGAGUGGCCCCCUGCUCUGGCUGGUCAAACGGAACCAAGUCCGUCUUCCUGAGAGGUUUGGUCCCCUUCAACCAGCUACAGCAGGGCUGGCAAAGCUCAAUAUUUGGAGA

comment:
miR-133b was predicted based on comparative analysis of human, mouse and Fugu [1].  It is homologous to miR-133a (MIR:MI0000159 and MIR:MI0000820). The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000822
mirna_id: hsa-mir-133b
description: Homo sapiens miR-133b stem-loop
organism: hsa
sequence:
CCUCAGAAGAAAGAUGCCCCCUGCUCUGGCUGGUCAAACGGAACCAAGUCCGUCUUCCUGAGAGGUUUGGUCCCCUUCAACCAGCUACAGCAGGGCUGGCAAUGCCCAGUCCUUGGAGA

comment:
miR-133b was predicted based on comparative analysis of human, mouse and Fugu [1], and later verified in human [2]. 


mirna_acc: MI0000824
mirna_id: hsa-mir-325
description: Homo sapiens miR-325 stem-loop
sequence: AUACAGUGCUUGGUUCCUAGUAGGUGUCCAGUAAGUGUUUGUGACAUAAUUUGUUUAUUGAGGACCUCCUAUCAAUCAAGCACUGUGCUAGGCUCUGG
organism: hsa
comment:
This sequence is the predicted human homologue [2] of a sequence cloned from rat neuronal tissue [1].  The mature miRNA differs from the rat sequence at two positions, and its expression has not been verified in human. 


mirna_acc: MI0000825
mirna_id: hsa-mir-345
description: Homo sapiens miR-345 stem-loop
sequence: ACCCAAACCCUAGGUCUGCUGACUCCUAGUCCAGGGCUCGUGAUGGCUGGUGGGCCCUGAACGAGGGGUCUGGAGGCCUGGGUUUGAAUAUCGACAGC
organism: hsa
comment:
This sequence is the predicted human homologue [2] of a sequence cloned from rat neuronal tissue [1], later validated in human [3,4].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000836
mirna_id: rno-mir-7a-2
previous_mirna_id: rno-mir-7-2
description: Rattus norvegicus miR-7a-2 stem-loop
sequence: GGACAGACCAGCCCUGUCUGGAAGACUAGUGAUUUUGUUGUUGUGUCUGUGUCCAACAACAAGUCCCAGUCUGCCACAUGGUGUUGGUCACAUCA
organism: rno
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000837
mirna_id: rno-mir-7b
description: Rattus norvegicus miR-7b stem-loop
organism: rno
sequence:
AGGCCAGAACACAUGAGCCAAUGCUAUGUGGAAGACUUGUGAUUUUGUUGUUCUGAUAUGAUAUGACAACAAGUCACAGCCAGCCUCAUAGAGUGGACUCCCAUCACCUU


mirna_acc: MI0000842
mirna_id: rno-mir-10b
description: Rattus norvegicus miR-10b stem-loop
organism: rno
sequence:
CCAAAGUUGUAACGUUGUCUAUAUAUACCCUGUAGAACCGAAUUUGUGUGGUACCCACAUAGUCACAGAUUCGAUUCUAGGGGAAUAUAUGGUCGAUGCAAAAACUUCA


mirna_acc: MI0000846
mirna_id: rno-mir-18a
previous_mirna_id: rno-mir-18
description: Rattus norvegicus miR-18a stem-loop
sequence: UGCGUGCUUUUUGUUCUAAGGUGCAUCUAGUGCAGAUAGUGAAGUAGACUAGCAUCUACUGCCCUAAGUGCUCCUUCUGGCAUAAGAAGUUAUGUC
organism: rno
comment:
This miRNA was predicted based on homology to a verified miRNA from mouse [1].  Its expression in rat was later verified by cloning [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000855
mirna_id: rno-mir-24-2
description: Rattus norvegicus miR-24-2 stem-loop
organism: rno
sequence:
GCCUCUCCCUGGGCUCCGCCUCCUGUGCCUACUGAGCUGAAACAGUUGAUUCCAGUGCACUGGCUCAGUUCAGCAGGAACAGGAGUCCAGCCCCCAUAGGAGCUGGCA


mirna_acc: MI0000868
mirna_id: rno-mir-30b
description: Rattus norvegicus miR-30b stem-loop
sequence: CCGAGUUUCAGUUCAUGUAAACAUCCUACACUCAGCUGUCAUACAUGAGUUGGCUGGGAUGUGGAUGUUUACGUCAGCUGUCUUGGA
organism: rno
comment:
Landgraf et al. show that miRNA sequences from both arms of this hairpin precursor are similarly expressed [4]. 


mirna_acc: MI0000872
mirna_id: rno-mir-31a
previous_mirna_id: rno-mir-31
description: Rattus norvegicus miR-31a stem-loop
organism: rno
sequence:
UGCUCCUGAAACUUGGAACUGGAGAGGAGGCAAGAUGCUGGCAUAGCUGUUGAACUGAGAACCUGCUAUGCCAACAUAUUGCCAUCUUUCCUGUCUGACAGCAGCU


mirna_acc: MI0000877
mirna_id: rno-mir-34a
description: Rattus norvegicus miR-34a stem-loop
organism: rno
sequence:
CCGGCUGUGAGUAAUUCUUUGGCAGUGUCUUAGCUGGUUGUUGUGAGUAUUAGCUAAGGAAGCAAUCAGCAAGUAUACUGCCCUAGAAGUGCUGCACGUUGU


mirna_acc: MI0000881
mirna_id: rno-mir-96
description: Rattus norvegicus miR-96 stem-loop
organism: rno
sequence:
CCAGUACCAUCUGCUUGGCCGAUUUUGGCACUAGCACAUUUUUGCUUGUGUCUCUCCGCUCUGAGCAAUCAUGUGCAGUGCCAAUAUGGGAAAAGCGGGCUGCUGC


mirna_acc: MI0000882
mirna_id: rno-mir-98
description: Rattus norvegicus miR-98 stem-loop
organism: rno
sequence:
CUGCACAUGCUGGGGUGAGGUAGUAAGUUGUAUUGUUGUGGGGUAGGGAUUUUAGGCCCCAAUAAGAAGAUAACUAUACAACUUACUACUUUCCCUGGUGUGUGGCAU


mirna_acc: MI0000905
mirna_id: rno-mir-132
description: Rattus norvegicus miR-132 stem-loop
organism: rno
sequence:
CCGCCCCCGCGUCUCCAGGGCAACCGUGGCUUUCGAUUGUUACUGUGGGAACCGGAGGUAACAGUCUACAGCCAUGGUCGCCCCGCAGCACGCCCACGCUC


mirna_acc: MI0000910
mirna_id: rno-mir-137
description: Rattus norvegicus miR-137 stem-loop
organism: rno
sequence:
GGCCCUCUGACUCUCUUCGGUGACGGGUAUUCUUGGGUGGAUAAUACGGAUUACGUUGUUAUUGCUUAAGAAUACGCGUAGUCGAGGAGAGUACCAGCGGCA


mirna_acc: MI0000916
mirna_id: rno-mir-143
description: Rattus norvegicus miR-143 stem-loop
organism: rno
sequence:
GCGGAGCGCCUGUCUCCCAGCCUGAGGUGCAGUGCUGCAUCUCUGGUCAGUUGGGAGUCUGAGAUGAAGCACUGUAGCUCAGGAAGGGAGAAGAUGUUCUGCAGC


mirna_acc: MI0000924
mirna_id: rno-mir-181c
description: Rattus norvegicus miR-181c stem-loop
organism: rno
sequence:
AGAACUUGCCAAGGGUUUGGGGGAACAUUCAACCUGUCGGUGAGUUUGGGCAGCUCAGACAAACCAUCGACCGUUGAGUGGACCCCGAGGCCUGGAACUGCCACCC


mirna_acc: MI0000925
mirna_id: rno-mir-181a-2
previous_mirna_id: rno-mir-181a
description: Rattus norvegicus miR-181a-2 stem-loop
organism: rno
sequence:
AGAUGGGCAACCAAGGCAGCCUUAAGAGGACUCCAUGGAACAUUCAACGCUGUCGGUGAGUUUGGGAUUCAAAAACAAAAAAAACCACCAACCGUUGACUGUACCUUGGGAUUCUUA


mirna_acc: MI0000926
mirna_id: rno-mir-181b-1
description: Rattus norvegicus miR-181b-1 stem-loop
organism: rno
sequence:
CCUGUGCAGAGAUGAUGUUUACAAAGGUCACAAUCAACAUUCAUUGCUGUCGGUGGGUUGAACUGUGUAGAAAAGCUCACUGAACAAUGAAUGCAACUGUGGCCCCGCUU


mirna_acc: MI0000928
mirna_id: rno-mir-183
description: Rattus norvegicus miR-183 stem-loop
organism: rno
sequence:
CCAGAGAGUGUGACUCCUGUCCUGUGUAUGGCACUGGUAGAAUUCACUGUGAACAGUCUCGGUCAGUGAAUUACCGAAGGGCCAUAAACAGAGCAGAGACAGAUCCGCGA


mirna_acc: MI0000932
mirna_id: rno-mir-187
description: Rattus norvegicus miR-187 stem-loop
organism: rno
sequence:
GGGCUCACAGGACACAAUGCGGAUCCUCAGGCUACAACACAGGACCCGGGCGCUGCUCUGACCCCUCGUGUCUUGUGUUGCAGCCGGAGGGACGCAGGUCUGCA


mirna_acc: MI0000935
mirna_id: rno-mir-192
description: Rattus norvegicus miR-192 stem-loop
organism: rno
sequence:
GUCAAGAUGGAGUGCACAGGGCUCUGACCUAUGAAUUGACAGCCAGUACUCUGAUCUCGCCUCUGGCUGCCAGUUCCAUAGGUCACAGGUAUGUUCGCCUCAAUGCCAGC


mirna_acc: MI0000940
mirna_id: rno-mir-196a
previous_mirna_id: rno-mir-196
description: Rattus norvegicus miR-196a stem-loop
organism: rno
sequence:
UGUUUGCUCAGCUGAUCUGUGGCUUAGGUAGUUUCAUGUUGUUGGGAUUGAGUUUUGAACUCGGCAACAAGAAACUGCCUGAGUUACAUCAGUCGGUUUUCGUCGAGGGC

comment:
Yekta et al. report that miR-196 miRNAs are expressed from HOX gene clusters in mammals, and that HOX genes in these clusters are targets of miR-196.  Indeed, HOXB8 mRNA was shown to be a natural target for miR-196-directed cleavage through a perfectly complementary miR-target site.  Other HOX genes have imperfect miR-196 complementary sites indicative of regulation by translational repression [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0000941
mirna_id: rno-mir-199a
description: Rattus norvegicus miR-199a stem-loop
organism: rno
sequence:
UGGAAGCUUCUGGAGAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCCGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGGCCAGCA


mirna_acc: MI0000946
mirna_id: rno-mir-204
description: Rattus norvegicus miR-204 stem-loop
organism: rno
sequence:
GGCUACAGCCCUUCUUCAUGUGACUCGUGGACUUCCCUUUGUCAUCCUAUGCCUGAGAAUAUAUGAAGGAGGCUGGGAAGGCAAAGGGACGUUCAAUUGUCAUCACUGGC


mirna_acc: MI0000947
mirna_id: rno-mir-205
description: Rattus norvegicus miR-205 stem-loop
organism: rno
sequence:
AAACAGCCCCAGACAAUCCAUGGGUCCUCCUGUCCUUCAUUCCACCGGAGUCUGUCUUAUGCCAACCAGAUUUCAGUGGAGUGAAGCUCAGGAGGCAUGGAGCUGCCA


mirna_acc: MI0000950
mirna_id: rno-mir-210
description: Rattus norvegicus miR-210 stem-loop
organism: rno
sequence:
CCGGGGCAGUCCCUCCAGGCUCAGGACAGCCACUGCCCACAGCACACUGCGUUGCUCCGGACCCACUGUGCGUGUGACAGCGGCUGAUCUGUCCCUGGGCAGCGCGAACC


mirna_acc: MI0000951
mirna_id: rno-mir-211
description: Rattus norvegicus miR-211 stem-loop
organism: rno
sequence:
CAGCUUGGACCUGUGACCUCUGGGCUUCCCUUUGUCAUCCUUUGCCUAGGCCUCUGAGUGGGGCAAGGACAGCAAAGGGGGGCUCAGUGGUCACCUCUACUGCAGA


mirna_acc: MI0000952
mirna_id: rno-mir-212
description: Rattus norvegicus miR-212 stem-loop
organism: rno
sequence:
CGGGAUAUCCCCGCCCGGGCAGCGCGCCGGCACCUUGGCUCUAGACUGCUUACUGCCCGGGCCGCCCUCAGUAACAGUCUCCAGUCACGGCCACCGACGCCUGGCCCCGCC


mirna_acc: MI0000953
mirna_id: rno-mir-181a-1
previous_mirna_id: rno-mir-213
description: Rattus norvegicus miR-181a-1 stem-loop
organism: rno
sequence:
AGGUUGCUUCAGUGAACAUUCAACGCUGUCGGUGAGUUUGGAAUUCAAAUAAAAACCAUCGACCGUUGAUUGUACCCUAUAGCUAACCAUUAUCUACUCC


mirna_acc: MI0000954
mirna_id: rno-mir-214
description: Rattus norvegicus miR-214 stem-loop
organism: rno
sequence:
GUCCUGGAUGGACAGAGUUGUCAUGUGUCUGCCUGUCUACACUUGCUGUGCAGAACAUCCGCUCACCUGUACAGCAGGCACAGACAGGCAGUCACAUGACAACCCAGCCU


mirna_acc: MI0000955
mirna_id: rno-mir-216a
previous_mirna_id: rno-mir-216
description: Rattus norvegicus miR-216a stem-loop
organism: rno
sequence:
GUUAGCUAUGAGUUAGUUUAAUCUCAGCUGGCAACUGUGAGAUGUCCCUAUCAUUCCUCACAGUGGUCUCUGGGAUUAUGCUAAACAGAGCAAUUUCCUUGACCUC


mirna_acc: MI0000956
mirna_id: rno-mir-217
description: Rattus norvegicus miR-217 stem-loop
organism: rno
sequence:
ACCACAGUCAUUGUAGUUUUGAUGUCGCAGAUACUGCAUCAGGAACUGACUGGAUAAGACUCAGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACA


mirna_acc: MI0000958
mirna_id: rno-mir-218a-1
previous_mirna_id: rno-mir-218-1
description: Rattus norvegicus miR-218a-1 stem-loop
organism: rno
sequence:
GUGAUAACGUAGCGAGAUUUUCUGUUGUGCUUGAUCUAACCAUGUGCUUGCGAGGUAUGAGUAAAACAUGGUUCCGUCAAGCACCAUGGAACGUCACGCAGCUUUCUACA


mirna_acc: MI0000959
mirna_id: rno-mir-219-1
description: Rattus norvegicus miR-219-1 stem-loop
organism: rno
sequence:
CUGUCCCGGGCCGCGGCUCCUGAUUGUCCAAACGCAAUUCUCGAGUCUCUGGCUCCGGCCGAGAGUUGCGUCUGGACGUCCCGAGCCGCCGCCCCCAAACCUCGAGGGGG


mirna_acc: MI0000961
mirna_id: rno-mir-221
description: Rattus norvegicus miR-221 stem-loop
organism: rno
sequence:
UGAAUAUCCAGGUCUGGGGCAUGAACCUGGCAUACAAUGUAGAUUUCUGUGUUUGUUAGGCAACAGCUACAUUGUCUGCUGGGUUUCAGGCUACCUGGAAGCAUUUCUC


mirna_acc: MI0000962
mirna_id: rno-mir-222
description: Rattus norvegicus miR-222 stem-loop
organism: rno
sequence:
AAGGAUUAGGGUGCCCUCAGUGGCUCAGUAGCCAGUGUAGAUCCUGUCUUUGGUAAUCAGCAGCUACAUCUGGCUACUGGGUCUCUGAUGGCAUCAUCUAGCU


mirna_acc: MI0000963
mirna_id: rno-mir-223
description: Rattus norvegicus miR-223 stem-loop
organism: rno
sequence:
UCUGGCCUUCUGCAGUGUUACGCUCCGUGUAUUUGACAAGCUGAGUUGGACACUCUGUGUGGUAGAGUGUCAGUUUGUCAAAUACCCCAAGUGUGGCUCAUGCUUAUCAG


mirna_acc: MI0000965
mirna_id: rno-mir-291a
previous_mirna_id: rno-mir-291
description: Rattus norvegicus miR-291a stem-loop
sequence: CCGGUGUAGUAGCCAUCAAAGUGGAGGCCCUCUCUUGGGCCCGAGCUAGAAAGUGCUUCCACUUUGUGUGCCACUGCAUGGG
organism: rno
comment:
This sequence is the predicted rat homologue of a confirmed miRNA from mouse [1].  Its expression has not been experimentally verified in rat. 


mirna_acc: MI0000974
mirna_id: mmu-mir-215
description: Mus musculus miR-215 stem-loop
organism: mmu
sequence:
AGCUCUCAGCAUCAACGGUGUACAGGAGAAUGACCUAUGAUUUGACAGACCGUGCAGCUGUGUAUGUCUGUCAUUCUGUAGGCCAAUAUUCUGUAUGUCACUGCUACUUAAA

comment:
This mouse miRNA was predicted by computational methods using conservation with human and Fugu rubripes sequences [1].  Expression of the excised miR has been validated in zebrafish, and the 5' end mapped by PCR.  The 3' end was not experimentally determined.  The mature sequence differs from the human miR-215 at A12->U, and its expression has not been verified in mouse. 


mirna_acc: MI0000975
mirna_id: ath-MIR167d
description: Arabidopsis thaliana miR167d stem-loop
organism: ath
sequence:

comment:
This sequence is a predicted paralogue of the previously identified miR167 family [1], later experimentally verified [2].  It is predicted to target mRNAs coding for Auxin Response Factors (ARF transcription factors). 


mirna_acc: MI0000976
mirna_id: ath-MIR169b
description: Arabidopsis thaliana miR169b stem-loop
organism: ath
sequence:
CCCAACGGAGUAGAAUUGCAUGAAGUGGAGUAGAGUAUAAUGCAGCCAAGGAUGACUUGCCGGAACGUUGUUAACCAUGCAUAUGAAUAAUGUGAUGAUUAAUUAUGUGAUGAACAUAUUUCUGGCAAGUUGUCCUUCGGCUACAUUUUGCUCUCUUCUUCUCAUGCAAACUUUCCUUGGG

comment:
This sequence is a predicted paralogue of the previously identified miR169 family [1].  It is predicted to target mRNAs coding for the CCAAT Binding Factor (CBF) and HAP2-like transcription factors. 


mirna_acc: MI0000977
mirna_id: ath-MIR169c
description: Arabidopsis thaliana miR169c stem-loop
organism: ath
sequence:

comment:
This sequence is a predicted paralogue of the previously identified miR169 family [1], later experimentally verified [2].  It is predicted to target mRNAs coding for the CCAAT Binding Factor (CBF) and HAP2-like transcription factors. 


mirna_acc: MI0000978
mirna_id: ath-MIR169d
description: Arabidopsis thaliana miR169d stem-loop
organism: ath
sequence:
GUAUCAUAGAGUCUUGCAUGGAAAAAUUAAAGAAUGAGAUUGAGCCAAGGAUGACUUGCCGAUGUUAUCAACAAAUCUUAACUGAUUUUGGUGUCCGGCAAGUUGACCUUGGCUCUGUUUCCUUCUUUUCUUUUCAAUGUCAAACUCUAGAUAU

comment:
This sequence is a predicted paralogue of the previously identified miR169 family [1], later experimentally verified [2].  It is predicted to target mRNAs coding for the CCAAT Binding Factor (CBF) and HAP2-like transcription factors. 


mirna_acc: MI0000979
mirna_id: ath-MIR169e
description: Arabidopsis thaliana miR169e stem-loop
organism: ath
sequence:

comment:
This sequence is a predicted paralogue of the previously identified miR169 family [1], later experimentally verified [2].  It is predicted to target mRNAs coding for the CCAAT Binding Factor (CBF) and HAP2-like transcription factors. 


mirna_acc: MI0000980
mirna_id: ath-MIR169f
description: Arabidopsis thaliana miR169f stem-loop
organism: ath
sequence:
GGGUCUUGCAUGAAGGAAUAACGAAUGGAAUUGAGCCAAGGAUGACUUGCCGGUUUAAACCCAACCGGUUUAUGACCAUUGAUUUGGUCUCAUUCACAAUCUGUUGAUUCGUGUCUGGCAAGUUGACCUUGGCUCUGCUUCGUUCUCUAUUCUUCCAUGUUAGAUUC


mirna_acc: MI0000981
mirna_id: ath-MIR169g
description: Arabidopsis thaliana miR169g stem-loop
organism: ath
sequence:

comment:
This sequence is a predicted paralogue of the previously identified miR169 family [1], later experimentally verified [3,4].  It is predicted to target mRNAs coding for the CCAAT Binding Factor (CBF) and HAP2-like transcription factors.  Wang et al. report Northern blot evidence for the miR169* sequence from the opposite arm of the precursor [2]. 


mirna_acc: MI0000982
mirna_id: ath-MIR169h
description: Arabidopsis thaliana miR169h stem-loop
organism: ath
sequence:
UCAUAUAAGAGAAAAUGGUGACAUGAAGAAUGAGAACUUGUGUGGUAGCCAAGGAUGACUUGCCUGCGUUUUAGACCAUAUAUAUCAAAGACUCACUCGAUCGAUAGUCUUAGAGUUGGUUGGUCGUCAGGCAGUCUCCUUGGCUAUUCAAACAAUUCUCAUUCUCUUCAUUCACAUUUCUCUUUUUUGG

comment:
This sequence is a predicted paralogue of the previously identified miR169 family [1], later experimentally verified [2,3].  It is predicted to target mRNAs coding for the CCAAT Binding Factor (CBF) and HAP2-like transcription factors. 


mirna_acc: MI0000983
mirna_id: ath-MIR169i
description: Arabidopsis thaliana miR169i stem-loop
organism: ath
sequence:


mirna_acc: MI0000984
mirna_id: ath-MIR169j
description: Arabidopsis thaliana miR169j stem-loop
organism: ath
sequence:


mirna_acc: MI0000985
mirna_id: ath-MIR169k
description: Arabidopsis thaliana miR169k stem-loop
organism: ath
sequence:


mirna_acc: MI0000986
mirna_id: ath-MIR169l
description: Arabidopsis thaliana miR169l stem-loop
organism: ath
sequence:


mirna_acc: MI0000987
mirna_id: ath-MIR169m
description: Arabidopsis thaliana miR169m stem-loop
organism: ath
sequence:


mirna_acc: MI0000988
mirna_id: ath-MIR169n
description: Arabidopsis thaliana miR169n stem-loop
organism: ath
sequence:


mirna_acc: MI0000989
mirna_id: ath-MIR171b
description: Arabidopsis thaliana miR171b stem-loop
organism: ath
sequence:
UGCAAGGUAACGCGAGAUAUUAGUGCGGUUCAAUCAAAUAGUCGUCCUCUUAACUCAUGGAGAACGGUGUUGUUCGAUUGAGCCGUGCCAAUAUCACGCGGUAAACCAAAAAUGGCA

comment:
This sequence is a predicted paralogue of the previously identified miR171 family [1].  It is predicted to target mRNAs coding for SCARECROW-like transcription factors.  Its expression in Arabidopsis was confirmed by cloning and Northern blot [2,3].  The mature sequence reported in [3] is offset by 4 nts with respect to the sequence shown here. 


mirna_acc: MI0000990
mirna_id: ath-MIR171c
description: Arabidopsis thaliana miR171c stem-loop
organism: ath
sequence:
UGAGCGCACUAUCGGACAUCAAAUACGAGAUAUUGGUGCGGUUCAAUCAGAAAACCGUACUCUUUUGUUUUAAAGAUCGGUUUAUUUGAUUGAGCCGUGCCAAUAUCACGCGUUUA

comment:
This sequence is a predicted paralogue of the previously identified miR171 family [1], later experimentally verified [2,3].  It is predicted to target mRNAs coding for SCARECROW-like transcription factors. 


mirna_acc: MI0000991
mirna_id: ath-MIR172c
description: Arabidopsis thaliana miR172c stem-loop
organism: ath
sequence:
AGCUACUGUUCGCUGUUGGAGCAUCAUCAAGAUUCACAAAUCAUCAAGUAUUCGUGUAAAUAAACCCAUUUAUGAUUAGAUUUUUGAUGUAUGUAUGAGAAUCUUGAUGAUGCUGCAGCUGCAAUCAGUGGCU

comment:
This sequence is a predicted paralogue of the previously identified miR172 family [1], later experimentally verified [2].  It is predicted to target mRNAs coding for APETALA2-like transcription factors. 


mirna_acc: MI0000992
mirna_id: ath-MIR172d
description: Arabidopsis thaliana miR172d stem-loop
organism: ath
sequence:
AGUCAUUGUUUGCUAUUGCAACAUCUUCAAGAUUCAGAAAUCAGAUUCUCUUAUGGGUUUUCUUUUGAGCCUUUAUUUUUUGGUUUGAGAAUCUUGAUGAUGCUGCAGCGGCAAUUAAAUGGCU

comment:
This sequence is a predicted paralogue of the previously identified miR172 family [1], later experimentally verified [2].  It is predicted to target mRNAs coding for APETALA2-like transcription factors. 


mirna_acc: MI0001000
mirna_id: ath-MIR390a
description: Arabidopsis thaliana miR390a stem-loop
organism: ath
sequence:
GUAGAGAAGAAUCUGUAAAGCUCAGGAGGGAUAGCGCCAUGAUGAUCACAUUCGUUAUCUAUUUUUUGGCGCUAUCCAUCCUGAGUUUCAUUGGCUCUUCUUACUAC

comment:
miR390 was independently cloned by the ASRP project [1], and predicted by computational methods [2]. 


mirna_acc: MI0001001
mirna_id: ath-MIR390b
description: Arabidopsis thaliana miR390b stem-loop
organism: ath
sequence:
GAGAAAUAGCUAUAAAGCUCAGGAGGGAUAGCGCCAUGGCUCACCAGUGCUGUAUGUUUUGUAUAUGCGUACAUGUAUAUCUGUUGGCGCUAUCCAUCCUGAGUUCCAUAGCUUCUUCUU

comment:
miR390 was independently cloned by the ASRP project [1], and predicted by computational methods [2]. 


mirna_acc: MI0001002
mirna_id: ath-MIR391
description: Arabidopsis thaliana miR391 stem-loop
organism: ath
sequence:


mirna_acc: MI0001003
mirna_id: ath-MIR393a
description: Arabidopsis thaliana miR393a stem-loop
organism: ath
sequence:
AGAGGAAGGAUCCAAAGGGAUCGCAUUGAUCCUAAUUAAGGUGAAUUCUCCCCAUAUUUUCUUUAUAAUUGGCAAAUAAAUCACAAAAAUUUGCUUGGUUUUGGAUCAUGCUAUCUCUUUGGAUUCAUCCUUC

comment:
This sequence belongs to the miR393 family of miRNAs, which are predicted to target mRNAs coding for F-box proteins and bHLH transcription factors [1]. 


mirna_acc: MI0001004
mirna_id: ath-MIR393b
description: Arabidopsis thaliana miR393b stem-loop
organism: ath
sequence:
AGAGAAAGGAUCCAAAGGGAUCGCAUUGAUCCUAAUUAAGCUGAUUUAUUCCCCAAUAAUUGUUUUUUUUUUCCUUCUCAAUCGAAAGAUGGAAGAAAAACAAAUUCCAAACAUUUUGCUUACUUUUCCGGAUCAUGCGAUCUCUUUGGAUUCAUUCUUU

comment:
This sequence belongs to the miR393 family of miRNAs, which are predicted to target mRNAs coding for F-box proteins and bHLH transcription factors [1]. 


mirna_acc: MI0001005
mirna_id: ath-MIR394a
description: Arabidopsis thaliana miR394a stem-loop
organism: ath
sequence:
CUUACAGUCAUCUUUGGCAUUCUGUCCACCUCCUUCUAUACAUAUAUGCAUGUGUAUAUAUAUAUGCGUUUCGUGUGAAAGAAGGAGGUGGGUAUACUGCCAAUAGAGAUCUGUUAG

comment:
This sequence belongs to the miR394 family of miRNAs, which are predicted to target mRNAs coding for F-box proteins [1]. 


mirna_acc: MI0001006
mirna_id: ath-MIR394b
description: Arabidopsis thaliana miR394b stem-loop
organism: ath
sequence:
CUUACAGAGAUCUUUGGCAUUCUGUCCACCUCCUCUCUCUAUAUUUAUGUGUAAUAAGUGUACGUAUCUACGGUGUGUUUCGUAAGAGGAGGUGGGCAUACUGCCAAUAGAGAUCUGUUAG

comment:
This sequence belongs to the miR394 family of miRNAs, which are predicted to target mRNAs coding for F-box proteins [1]. 


mirna_acc: MI0001007
mirna_id: ath-MIR395a
description: Arabidopsis thaliana miR395a stem-loop
sequence: AUGUCUCCUAGAGUUCCUCUGAGCACUUCAUUGGGGAUACAAUUUUUCUAAAUGAUUAUCCACUGAAGUGUUUGGGGGAACUCCCGGACCCAU
organism: ath
comment:
This sequence belongs to the miR395 family of miRNAs, which are predicted to target mRNAs coding for ATP sulphurylases [1]. 


mirna_acc: MI0001008
mirna_id: ath-MIR395b
description: Arabidopsis thaliana miR395b stem-loop
organism: ath
sequence:
AUGUCCCCAUGAGUUCCCUUUAACGCUUCAUUGUUAAAUACUCAAAGCCACAUUGGUUUGUAUACAACACUGAAGUGUUUGGGGGGACUCUUGGUGUCAU

comment:
This sequence belongs to the miR395 family of miRNAs, which are predicted to target mRNAs coding for ATP sulphurylases [1]. 


mirna_acc: MI0001009
mirna_id: ath-MIR395c
description: Arabidopsis thaliana miR395c stem-loop
organism: ath
sequence:
AUGUCCACAUGAGUUCCCUUUAACGCUUCAUUGUUGAAUACUCAAAGCCACAUUGGUUUGUAUAUAACACUGAAGUGUUUGGGGGGACUCUUGGUGUCAU

comment:
This sequence belongs to the miR395 family of miRNAs, which are predicted to target mRNAs coding for ATP sulphurylases [1]. 


mirna_acc: MI0001010
mirna_id: ath-MIR395d
description: Arabidopsis thaliana miR395d stem-loop
organism: ath
sequence:
AUGUCCUCUAGAGUUCUCCUGAACACUUCAUUGGAAAUUUGUUAUUCAGUAAGCUAACAGUUAAUUCCACUGAAGUGUUUGGGGGAACUCCCGAUGUCAU


mirna_acc: MI0001012
mirna_id: ath-MIR395f
description: Arabidopsis thaliana miR395f stem-loop
organism: ath
sequence:
AUGUCCCCUUGAGUUCCCUUAAACGCUUCAUUGUUCAUACUUUGUUAUCAUCUAUCGAUCGAUCAAUCAAUCUGAUGAACACUGAAGUGUUUGGGGGGACUCUAGGUGACAU


mirna_acc: MI0001013
mirna_id: ath-MIR396a
description: Arabidopsis thaliana miR396a stem-loop
organism: ath
sequence:
CUCUGUAUUCUUCCACAGCUUUCUUGAACUGCAAAACUUCUUCAGAUUUUUUUUUUUUUCUUUUGAUAUCUCUUACGCAUAAAAUAGUGAUUUUCUUCAUAUCUCUGCUCGAUUGAUUUGCGGUUCAAUAAAGCUGUGGGAAGAUACAGAC

comment:
This sequence belongs to the miR396 family of miRNAs, which are predicted to target mRNAs coding for Growth Regulating Factor (GRF) transcription factors, rhodenase-like proteins, and kinesin-like protein B [1]. 


mirna_acc: MI0001014
mirna_id: ath-MIR396b
description: Arabidopsis thaliana miR396b stem-loop
organism: ath
sequence:
GGUCAUACUUUUCCACAGCUUUCUUGAACUUUCUUUUUCAUUUCCAUUGUUUUUUUCUUAAACAAAAGUAAGAAGAAAAAAAACUUUAAGAUUAAGCAUUUUGGAAGCUCAAGAAAGCUGUGGGAAAACAUGACA

comment:
This sequence belongs to the miR396 family of miRNAs, which are predicted to target mRNAs coding for Growth Regulating Factor (GRF) transcription factors, rhodenase-like proteins, and kinesin-like protein B [1].  The mature sequence reported in [2] is offset by 1 nt with respect to the sequence shown here. 


mirna_acc: MI0001015
mirna_id: ath-MIR397a
description: Arabidopsis thaliana miR397a stem-loop
organism: ath
sequence:
UGAAUGAACAUCAUUGAGUGCAGCGUUGAUGUAAUUUCGUUUUGUUUUUCAUUGUUGAAUGGAUUAAAAGAAUUUAUACCAGCGUUGCGCUCAAUUAUGUUUUUCUA

comment:
This sequence belongs to the miR397 family of miRNAs, which are predicted to target mRNAs coding for laccases and beta-6 tubulin [1]. 


mirna_acc: MI0001016
mirna_id: ath-MIR397b
description: Arabidopsis thaliana miR397b stem-loop
organism: ath
sequence:
UGAAUGAACAUCAUUGAGUGCAUCGUUGAUGUAAUUUUACUUAUUUUAUUCCAUUGUUGAAUUAAUUAAAGAAGUAUAUAUCAGCGUUGCAUUCAAUUAUGUUUUUCUA

comment:
This sequence belongs to the miR397 family of miRNAs, which are predicted to target mRNAs coding for laccases and beta-6 tubulin [1]. 


mirna_acc: MI0001017
mirna_id: ath-MIR398a
description: Arabidopsis thaliana miR398a stem-loop
organism: ath
sequence:
UGAAAUUUCAAAGGAGUGGCAUGUGAACACAUAUCCUAUGGUUUCUUCAAAUUUCCAUUGAAACCAUUGAGUUUUGUGUUCUCAGGUCACCCCUUUGAAUCUCCC

comment:
This sequence belongs to the miR398 family of miRNAs, which are predicted to target mRNAs coding for copper superoxide dismutases and cytochrome C oxidase subunit V [1]. 


mirna_acc: MI0001018
mirna_id: ath-MIR398b
description: Arabidopsis thaliana miR398b stem-loop
organism: ath
sequence:
UGGAUCUCGACAGGGUUGAUAUGAGAACACACGAGUAAUCAACGGCUGUAAUGACGCUACGUCAUUGUUACAGCUCUCGUUUUCAUGUGUUCUCAGGUCACCCCUGCUGAGCUCUU

comment:
This sequence belongs to the miR398 family of miRNAs, which are predicted to target mRNAs coding for copper superoxide dismutases and cytochrome C oxidase subunit V [1]. 


mirna_acc: MI0001019
mirna_id: ath-MIR398c
description: Arabidopsis thaliana miR398c stem-loop
organism: ath
sequence:
UGGAUCUCGACAGGGUUGAUAUGAGAACACACGAGCAAUCAACGGCUAUAACGACGCUACGUCAUUGUUACAGCUCUCGUUUCAUGUGUUCUCAGGUCACCCCUGCUGAGCUCUU

comment:
This sequence belongs to the miR398 family of miRNAs, which are predicted to target mRNAs coding for copper superoxide dismutases and cytochrome C oxidase subunit V [1]. 


mirna_acc: MI0001020
mirna_id: ath-MIR399a
description: Arabidopsis thaliana miR399a stem-loop
organism: ath
sequence:
AAAUGCAUUACAGGGUAAGAUCUCUAUUGGCAGGAAACCAUUACUUAGAUCUUUGCAUCUCUUUAUGCAUUGCUUUUAAUUAGUGAGUUAUCUGCCAAAGGAGAUUUGCCCUGUAAUUCUUCU

comment:
This sequence belongs to the miR399 family of miRNAs, which are predicted to target mRNAs coding for a phosphatase transporter [1]. 


mirna_acc: MI0001021
mirna_id: ath-MIR399b
description: Arabidopsis thaliana miR399b stem-loop
organism: ath
sequence:
UCACUAGUUUUAGGGCGCCUCUCCAUUGGCAGGUCCUUUACUUCCAAAUAUACACAUACAUAUAUGAAUAUCGAAAAUUUCCGAUGAUCGAUUUAUAAAUGACCUGCCAAAGGAGAGUUGCCCUGAAACUGGUUC

comment:
This sequence belongs to the miR399 family of miRNAs, which are predicted to target mRNAs coding for a phosphatase transporter [1]. 


mirna_acc: MI0001022
mirna_id: ath-MIR399c
description: Arabidopsis thaliana miR399c stem-loop
organism: ath
sequence:
GGAGCAGUAAUAGGGCAUCUUUCUAUUGGCAGGCGACUUGGCUAUUUGUAUCUUUUGUGUUCUUGACUAUUGGCUAUGUCACUUGCCAAAGGAGAGUUGCCCUGUCACUGCUUC

comment:
This sequence belongs to the miR399 family of miRNAs, which are predicted to target mRNAs coding for a phosphatase transporter [1]. 


mirna_acc: MI0001023
mirna_id: ath-MIR399d
description: Arabidopsis thaliana miR399d stem-loop
organism: ath
sequence:
GGUUGGAUUACUGGGCGAAUACUCCUAUGGCAGAUCGCAUUGGCUAGAUAUGCAAGUAAAAUGCUUCUCUGCCAAAGGAGAUUUGCCCCGCAAUUCAUCC


mirna_acc: MI0001024
mirna_id: ath-MIR399e
description: Arabidopsis thaliana miR399e stem-loop
organism: ath
sequence:
GAAAGCAUUACAGGGCGAAUCCUCUAUUGGCAGUGGAAGUUGAUGACCCUUAUAUGUUAUUUUCUCAUCAUUUUCCUCUGCCAAAGGAGAUUUGCCUCGCAAUGCUUCA


mirna_acc: MI0001025
mirna_id: ath-MIR399f
description: Arabidopsis thaliana miR399f stem-loop
organism: ath
sequence:
AUAUGCAUUACAGGGCAAGAUCACCAUUGGCAGAGAUCUAUUACUUCAUUCUUGCAUCAUAUGCAUAAAUGUUUGUGGUGAGCUCUCUGCCAAAGGAGAUUUGCCCGGUAAUUCUCUU


mirna_acc: MI0001026
mirna_id: osa-MIR393a
previous_mirna_id: osa-MIR393
description: Oryza sativa miR393 stem-loop
organism: osa
sequence:
UGGGGAAGCAUCCAAAGGGAUCGCAUUGAUCCUUCAUCGCUCUCGCUCGCUUCCAUGGCGGUCGUCGUCUACAAGCAGCUUGACGGAUCAUGCGAUCCUUUUGGAGGCUUCCUCU

comment:
This sequence belongs to the miR393 family of miRNAs, which are predicted to target mRNAs coding for F-box proteins and bHLH transcription factors [1]. 


mirna_acc: MI0001027
mirna_id: osa-MIR394
description: Oryza sativa miR394 stem-loop
organism: osa
sequence:
UACUGAGAGUUCUUUGGCAUUCUGUCCACCUCCUUGUCGAAUCCUCAGAGACAGAAAUCUCAUAUCUGUUGAUCUUGGAGGUGGGCAUACUGCCAAUGGAGCUGUGUAGG

comment:
This sequence belongs to the miR394 family of miRNAs, which are predicted to target mRNAs coding for F-box proteins [1]. 


mirna_acc: MI0001028
mirna_id: osa-MIR395b
description: Oryza sativa miR395b stem-loop
sequence: GAGUCCCUAGGAGUUCCUUUCAAGCACUUUACGACACACUGUAUUGAGAGUUGUCGUGAAGUGUUUGGGGGAACUCUUAGUGUCGC
organism: osa
comment:
This sequence belongs to the miR395 family of miRNAs, which are predicted to target mRNAs coding for ATP sulphurylases [1].  Four clusters of rice miR395 genes are found on chromosomes 4, 8 and 9, and the genes have been renamed to reflect this arrangement [2]. 


mirna_acc: MI0001032
mirna_id: osa-MIR395h
description: Oryza sativa miR395h stem-loop
organism: osa
sequence:
UUGUUACCUGGAGUUUCCUCAACACACUUCACAUCUGCUAGGCCCUAUUACAAUUGCGCAAUGUGGAGUCUGCAAUUGGUAGUGAAGUGUUUGGGGGAACUCUAGGUGGCAC


mirna_acc: MI0001034
mirna_id: osa-MIR395j
description: Oryza sativa miR395j stem-loop
organism: osa
sequence:
GUGUUCCCAAGAGUUCCUUGCAAGCACUUCACAUAGAACUUCUGUUACUCUCAUGUAACAUUGGGAACUUGAGAAGCUACUGUGAAGUGUUUGGGGGAACUCUAGGUGGCAC


mirna_acc: MI0001038
mirna_id: osa-MIR395t
previous_mirna_id: osa-MIR395n
description: Oryza sativa miR395t stem-loop
organism: osa
sequence:
UUAUCCACUGGAGUUCUCCUCAAACCACUUCAGCAGAUAGCUAGCUAGGCCUCAUUGCAUUGCACCACUGUUGCAUAACUAUGAGCAUGGGGCCAAAAGUUAGCUGCUUAUAGUGAAGUGUUUGGGGAAACUCCGGUUGGCAA


mirna_acc: MI0001042
mirna_id: osa-MIR395a
previous_mirna_id: osa-MIR395c
description: Oryza sativa miR395a stem-loop
organism: osa
sequence:
UUGUCCACUGGAGUUCUCCUCAAUCCACUUCAGUAGAUAGCUAUGGCUAGGCCUCAUUGCAUUGCACUGUUACAUAACUGUGAUCAUGGGGCCAAAAGCUAGCUAUGUAUAGUGAAGUGCUUGGGGGAACUCCAGUUGACAC


mirna_acc: MI0001046
mirna_id: osa-MIR396a
description: Oryza sativa miR396a stem-loop
organism: osa
sequence:
CUUUGUGAUCUUCCACAGCUUUCUUGAACUGCACGCAUGAUGAAUAAUCCCUUUGGUUAAUUGUGAUCUGGUCUCUGAGAGAUCGUAGUUAGACUCGAUCGGUUGCAUUGGCAUCAGAGAGAGCAGUUCAAUAAAGCUGUGGGAAAUUGCAGAG

comment:
This sequence belongs to the miR396 family of miRNAs, which are predicted to target mRNAs coding for Growth Regulating Factor (GRF) transcription factors, rhodenase-like proteins, and kinesin-like protein B [1]. 


mirna_acc: MI0001047
mirna_id: osa-MIR396b
description: Oryza sativa miR396b stem-loop
organism: osa
sequence:
CUUUGUGGUCUUCCACAGCUUUCUUGAACUGCAUCUUUGAGAGAGAUUAGCAUCCCUAUGUGUGGAUUUUGCUUGCACGAGUGUGCAGUUCAAUAAAGCUGUGGGAAAUUACAGAG

comment:
This sequence belongs to the miR396 family of miRNAs, which are predicted to target mRNAs coding for Growth Regulating Factor (GRF) transcription factors, rhodenase-like proteins, and kinesin-like protein B [1]. 


mirna_acc: MI0001048
mirna_id: osa-MIR396c
description: Oryza sativa miR396c stem-loop
organism: osa
sequence:
UGCCAUGCCUUUCCACAGCUUUCUUGAACUUCUCUUGUGCCUCACUCACUUUCAUUACUGGAGAGAUAUGCAUCAUCAGUGGAAGCUUAUAGGGAGAGGAGUGCAAGAAGAGGGUCAAGAAAGCUGUGGGAAGAAAUGGCA


mirna_acc: MI0001049
mirna_id: osa-MIR397a
description: Oryza sativa miR397a stem-loop
organism: osa
sequence:
AUCAAAUGCAUCAUUGAGUGCAGCGUUGAUGAACAACGGUAACCGGUCCAUGUUGAUGCGCAUUUGGCCGGUGAUCUGAUCAUCAUCAGCGCUUCACUCAAUCAUGCGUUUGGC

comment:
This sequence belongs to the miR397 family of miRNAs, which are predicted to target mRNAs coding for laccases and beta-6 tubulin [1]. 


mirna_acc: MI0001050
mirna_id: osa-MIR397b
description: Oryza sativa miR397b stem-loop
organism: osa
sequence:
AGGGAAGGCAUUAUUGAGUGCAGCGUUGAUGAACCUGCCGGCCGGCUAAAUUAAUUAGCAAGAAAGUCUGAAACUGGCUCAAAGGUUCACCAGCACUGCACCCAAUCACGCCUUUGCU


mirna_acc: MI0001051
mirna_id: osa-MIR398a
description: Oryza sativa miR398a stem-loop
organism: osa
sequence:
GCUGAACCCAGAGGAGUGGUACUGAGAACACAGGUGCCAAUACAAUGUAUGGUGAGCUACUGUAUAAUGGAGUAAUUCUGUAACUGUGUUCUCAGGUCACCCCUUUGGGUUUCUU


mirna_acc: MI0001053
mirna_id: osa-MIR399a
description: Oryza sativa miR399a stem-loop
organism: osa
sequence:
CUGUGAAUUACAGGGCAGUUCACCUUUGGCACAAGGGCAAGCAGUAGAAACCAUGCGUGCUUGCUAGAGCUGGAAAUGAUGCUGGUAGCAUUGCAUGGUUCAGGGAUCACAGAUCUCGUGCCAAAGGAGAAUUGCCCUGCGAUUUUGUC


mirna_acc: MI0001055
mirna_id: osa-MIR399c
description: Oryza sativa miR399c stem-loop
organism: osa
sequence:
CGGCGAAUUACAGGGCGGUUUCUCCUUUGGCACGUACGGAGGCAAGGCAUGCGGUGAAAAAUCUCUAGCUAGCCAUGCGUGCCAAAGGAGAAUUGCCCUGCGAUUCACCA


mirna_acc: MI0001056
mirna_id: osa-MIR399d
description: Oryza sativa miR399d stem-loop
organism: osa
sequence:


mirna_acc: MI0001057
mirna_id: osa-MIR399e
description: Oryza sativa miR399e stem-loop
organism: osa
sequence:
ACAUGCAUUACCGGGUGAGUCUUCCUUGGCAGUGUUCGAAUCGGCAGUACCGGUCUGCAAGUGAUCGGUCAAUCACCAGUUCACCGCUGCCAAAGGAGAUUUGCCCAGCAAUGCAACU


mirna_acc: MI0001058
mirna_id: osa-MIR399f
description: Oryza sativa miR399f stem-loop
organism: osa
sequence:
UGGUGGAUUACCGGGCCAUGUCUCCUUGGGCAGAGGUGAUCAGAUUGCACACUUCACUUCAACCUCUUGCUCUAGCUUGUUCUCUCUGCCAAAGGAGAUUUGCCCAGCAAUCCACAU


mirna_acc: MI0001059
mirna_id: osa-MIR399g
description: Oryza sativa miR399g stem-loop
organism: osa
sequence:
AUGUGCAUUGCAGGGCAACUACUCCAUUGGCAGAGGGAUGGAUUGGAUAUGGAUAUGGCUGAUGCUUCCAUUUGAUCCCAUCCCUAUCUGCCAAAGGAGAUUUGCCCAGCGAUUCACUC


mirna_acc: MI0001061
mirna_id: osa-MIR399i
description: Oryza sativa miR399i stem-loop
organism: osa
sequence:
GUGAGAAUCACAGUGCAGUUCUCCUCUGGCAUGGAGGGCAAGAGGAGCUGAAUAGCUAAUGGAUGAUAAACUGCUAGCCUUUCCCUGCCAAAGGAGAGCUGCCCUGCCAUUCAGUG


mirna_acc: MI0001062
mirna_id: osa-MIR399j
description: Oryza sativa miR399j stem-loop
organism: osa
sequence:
AGUCCAGUUUCAGGGCUCCUCUCUCUUGGCAGGGAGCAUGUGAAGUCUUUUGUAGCUCACUCAUUUUCAGCCCUCUGCCAAAGGAGAGUUGCCCUAAAACUGGACU


mirna_acc: MI0001063
mirna_id: osa-MIR399k
description: Oryza sativa miR399k stem-loop
organism: osa
sequence:
AGCUGCAUUGCUGGGCAAGUUGUCCUUUGGCAGAUGUUGCAGUUCAUCAUCGAUGCCUGGGGGUUACCAGACUACUGCCAAAGGAAAUUUGCCCCGGAAUUCAUCU


mirna_acc: MI0001064
mirna_id: ebv-mir-BHRF1-1
description: Epstein Barr virus miR-BHRF1-1 stem-loop
sequence: UAUUAACCUGAUCAGCCCCGGAGUUGCCUGUUUCAUCACUAACCCCGGGCCUGAAGAGGUUGACAA
organism: ebv
comment:
Pfeffer et al. cloned 5 miRNAs from a Burkitt's lymphoma cell line (BL41) infected with the B95-8 strain of Epstein-Barr virus [1].  They were all confirmed by Northern blot. 


mirna_acc: MI0001065
mirna_id: ebv-mir-BHRF1-2
description: Epstein Barr virus miR-BHRF1-2 stem-loop
sequence: CUUUUAAAUUCUGUUGCAGCAGAUAGCUGAUACCCAAUGUUAUCUUUUGCGGCAGAAAUUGAAAG
organism: ebv
comment:
Pfeffer et al. cloned 5 miRNAs from a Burkitt's lymphoma cell line (BL41) infected with the B95-8 strain of Epstein-Barr virus [1].  They were all confirmed by Northern blot.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0001067
mirna_id: ebv-mir-BART1
description: Epstein Barr virus miR-BART1 stem-loop
sequence: GGGGGUCUUAGUGGAAGUGACGUGCUGUGAAUACAGGUCCAUAGCACCGCUAUCCACUAUGUCUCGCCCG
organism: ebv
comment:
Pfeffer et al. cloned 5 miRNAs from a Burkitt's lymphoma cell line (BL41) infected with the B95-8 strain of Epstein-Barr virus [1].  They were all confirmed by Northern blot.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0001068
mirna_id: ebv-mir-BART2
description: Epstein Barr virus miR-BART2 stem-loop
sequence: ACUAUUUUCUGCAUUCGCCCUUGCGUGUCCAUUGUUGCAAGGAGCGAUUUGGAGAAAAUAAA
organism: ebv
comment:
Pfeffer et al. cloned 5 miRNAs from a Burkitt's lymphoma cell line (BL41) infected with the B95-8 strain of Epstein-Barr virus [1].  They were all confirmed by Northern blot.  The mature miRNA names reflect cloning frequencies from Landgraf et al. [2], and may differ subtly from previous annotations. 


mirna_acc: MI0001069
mirna_id: ath-MIR400
description: Arabidopsis thaliana miR400 stem-loop
organism: ath
sequence:
UGAGGAUUGUUUAUGAGAGUAUUAUAAGUCACUACAUUUGGUAAGCAAAGUGUUGUUUCUCAAACGAAGUGACUUAUGAUAAUCUCAUGAAUGGAUUUUGCA


mirna_acc: MI0001070
mirna_id: ath-MIR401
description: Arabidopsis thaliana miR401 stem-loop
organism: ath
sequence:


mirna_acc: MI0001071
mirna_id: ath-MIR402
description: Arabidopsis thaliana miR402 stem-loop
organism: ath
sequence:


mirna_acc: MI0001072
mirna_id: ath-MIR403
description: Arabidopsis thaliana miR403 stem-loop
organism: ath
sequence:
UUGUCAUUAGAAGAGUCGUAUUACAUGUUUUGUGCUUGAAUCUAAUUCAACAGGCUUUAUGUAAGAGAUUCUUUAACAAUUCCUAUAAUCUUUGUUGUUGGAUUAGAUUCACGCACAAACUCGUAAUCUGUCUUU


mirna_acc: MI0001073
mirna_id: ath-MIR404
description: Arabidopsis thaliana miR404 stem-loop
organism: ath
sequence:
UAGCAUGUUCGUUUCAUUAACGCUGGCGGUUGCGGCAGCGGCUGCGGUAGCGGUGGCGGCAAACACUACCGCAGGUUGUUGUUCGUUUUGUUGCCGCAGACGCUGCCGCAGCCGCUGCCGCAACCGCAGGUUUCUUUGUUCGUUUCGACG


mirna_acc: MI0001074
mirna_id: ath-MIR405a
description: Arabidopsis thaliana miR405a stem-loop
organism: ath
sequence:
UCAAAAUGGGUAACCCAACCCAACCCAACUCAUAAUCAAAUGAGUUUAUGAUUAAAUGAGUUAUGGGUUGACCCAACUCAUUUUGUUAAAUGAGUUGGGUCUAACCCAUAACUCAUUUCAUUUGAUGGGUUGAGUUGUUAAAUGGGUUAACCAUUUA


mirna_acc: MI0001075
mirna_id: ath-MIR405b
description: Arabidopsis thaliana miR405b stem-loop
organism: ath
sequence:
UUAACCCAUUUAACAAUUCAACCCAUCAAAUGAAAUGAGUUAUGGGUUAGACCCAACUCAUUUAACAAAAUGAGUUGGGUCUAACCCAUAACUCAUUUAAUUAUAAACUCAUUUGAUUAUGAGU


mirna_acc: MI0001078
mirna_id: ath-MIR406
description: Arabidopsis thaliana miR406 stem-loop
organism: ath
sequence:


mirna_acc: MI0001079
mirna_id: ath-MIR407
description: Arabidopsis thaliana miR407 stem-loop
comment: MIR407a and MIR407b published by Sunkar and Zhu [1] map to the same locus on NC_003071.3.
organism: ath
sequence:


mirna_acc: MI0001080
mirna_id: ath-MIR408
description: Arabidopsis thaliana miR408 stem-loop
organism: ath
sequence:


mirna_acc: MI0001082
mirna_id: ath-MIR156g
description: Arabidopsis thaliana miR156g stem-loop
organism: ath
sequence:
AUAACGAAGGCGACAGAAGAGAGUGAGCACACAUGGCUCUUUUUCUAGCAUGCUCAUGCUCGAAAGCUCUGCGUGCUUACUCUCUUCUUGUCUCCUGCUCUCU

comment:
This sequence is a predicted paralogue of the previously identified miR156 family [1], subsequently verified in [2].  It is predicted to target mRNAs coding for Squamosa-promoter Binding Protein (SBP)-like transcription factors. 


mirna_acc: MI0001083
mirna_id: ath-MIR156h
description: Arabidopsis thaliana miR156h stem-loop
organism: ath
sequence:
AUGAAAAAUGUUGACAGAAGAAAGAGAGCACAACCUGGGAUUAGCAAAAAGAUAGUUUUGCCCUUGUCGGGAGUGUGCUCUCUUUCCUUCUGCCACCAUCAUUGCG

comment:
This sequence is a predicted paralogue of the previously identified miR156 family [1], subsequently verified in [2].  It is predicted to target mRNAs coding for Squamosa-promoter Binding Protein (SBP)-like transcription factors. 


mirna_acc: MI0001085
mirna_id: ath-MIR159c
description: Arabidopsis thaliana miR159c stem-loop
organism: ath
sequence:

comment:
This sequence is a predicted paralogue of the previously identified miR159/JAW family [1].  It is predicted to target mRNAs coding for MYB and TCP transcription factors. 


mirna_acc: MI0001086
mirna_id: ath-MIR319c
description: Arabidopsis thaliana miR319c stem-loop
organism: ath
sequence:
UAGAUAUAGAAGGAGAUUCUUUCAGUCCAGUCAUGGAUAGAAAAAGAAGAGGGUAGAAAUAUCUGCCGACUCAUCCAUCCAAACACUCGUGGUAGAGAAACGAUAAAUUUAAACCGCAGUGACUGUGUGAAUGAUGCGGGAGAUAUUUUUGAUCCUUCUUUAUCUGUGUUUGGACUGAAGGGAGCUCCUUCUUUUUCUA

comment:
This sequence is a predicted paralogue of the previously identified miR159/JAW family [1], subsequently verified in [2,3].  It is predicted to target mRNAs coding for MYB and TCP transcription factors. 


mirna_acc: MI0001087
mirna_id: ath-MIR164c
description: Arabidopsis thaliana miR164c stem-loop
organism: ath
sequence:
UAACACUUGAUGGAGAAGCAGGGCACGUGCGAACACAAAUGAAAUCGAUCGGUACUUGUUGAUCAUAUUUUCGCACGUGUUCUACUACUCCAACACGUGUCU

comment:
This sequence is a predicted paralogue of the previously identified miR164 family [1].  It is predicted to target mRNAs coding for NAC domain transcription factors. 


mirna_acc: MI0001088
mirna_id: ath-MIR167c
description: Arabidopsis thaliana miR167c stem-loop
organism: ath
sequence:
CCAGUAGCAGUUAAGCUGCCAGCAUGAUCUUGUCUUCCUCUCUUAGGUUUCAUAUAUAGUUAAUAAAUAUUUUAUAUAUUUCUUGUUCUUACAAGAUUAUAUGAUCAUAGCUUAGAGAGAGAGAGAGACUAGGUCAUGCUGGUAGUUUCACCUGCUAAUG

comment:
This sequence is a predicted paralogue of the previously identified miR167 family [1], subsequently verified in [2].  It is predicted to target mRNAs coding for Auxin Response Factors (ARF transcription factors). 


mirna_acc: MI0001089
mirna_id: ath-MIR172e
description: Arabidopsis thaliana miR172e stem-loop
organism: ath
sequence:
GUAGUCGCAGAUGCAGCACCAUUAAGAUUCACAAGAGAUGUGGUUCCCUUUGCUUUCGCCUCUCGAUCCGCAGAAAAGGGUUCCUUAUCGAGUGGGAAUCUUGAUGAUGCUGCAUCAGCAAAUAC

comment:
This sequence is a predicted paralogue of the previously identified miR172 family [1].  It is predicted to target mRNAs coding for APETALA2-like transcription factors. 


mirna_acc: MI0001090
mirna_id: osa-MIR156k
description: Oryza sativa miR156k stem-loop
organism: osa
sequence:
UUGAGAGUGAUGACAGAAGAGAGAGAGCACAACCCGGCAGCAGCGACGACGGCGGUCGCUUCUGCCAGGGCCGUGUGCUCUCUGAUCUAUCUGUCAUUGCCGUCCA

comment:
This sequence is a predicted paralogue of the previously identified miR156 family [1].  It is predicted to target mRNAs coding for Squamosa-promoter Binding Protein (SBP)-like transcription factors. 


mirna_acc: MI0001091
mirna_id: osa-MIR156l
description: Oryza sativa miR156l stem-loop
organism: osa
sequence:
GCUAGGGAGCCGACAGAAGAGAGUGAGCAUAUAUAGUUCUUUCCUUGCAUAUGUGGUCAUAUGUGUGUUGACUGAAGAGAUACAUAUAUAUAGAGAGAGAGAGUUCAUGUGCUUGAAGCUAUAUGUGCUCACUUCUCUUUCUGUCAGCAAAUUAUC

comment:
This sequence is a predicted paralogue of the previously identified miR156 family [1].  It is predicted to target mRNAs coding for Squamosa-promoter Binding Protein (SBP)-like transcription factors. 


mirna_acc: MI0001092
mirna_id: osa-MIR159a
description: Oryza sativa miR159a stem-loop
organism: osa
sequence:

comment:
This sequence is a predicted paralogue of the previously identified miR159/JAW family [1].  It is predicted to target mRNAs coding for MYB and TCP transcription factors. 


mirna_acc: MI0001093
mirna_id: osa-MIR159b
description: Oryza sativa miR159b stem-loop
organism: osa
sequence:
GGUUAUGAAGUGGAGCUCCUUUCGUUCCAAUGAAAGGUUUAUCUGAAGGGUGAUACAGCUGCUUGUUCAUGGUUCCCACUAUUCUAUCUCAUAGGAAAAGAGAUAGGCUUGUGGUUUGCAUGACCAAGGAGCCGAAUCAACUCCUUGCUGACCACUCUUUGGAUUGAAGGGAGCUCUGCAUCUUGAUC

comment:
This sequence is a predicted paralogue of the previously identified miR159/JAW family [1].  It is predicted to target mRNAs coding for MYB and TCP transcription factors. 


mirna_acc: MI0001094
mirna_id: osa-MIR159c
description: Oryza sativa miR159c stem-loop
organism: osa
sequence:
GAGGAGGAAGAGGAGCUCCUUUCGAUCCAAUUCAGGAGAGGAAGUGGUAGGAUGCAGCUGCCGAUUCAUGGAUACCUCUGGAGUGCAUGGCAGCAAUGCUGUAGGCCUGCACUUGCAUGGGUUUGCAUGACCCGGGAGAUGAACCCACCAUUGUCUUCCUCUAUUGAUUGGAUUGAAGGGAGCUCCACAUCUCUCUC


mirna_acc: MI0001095
mirna_id: osa-MIR159d
description: Oryza sativa miR159d stem-loop
organism: osa
sequence:
UGAUGUGAGGAGGAGCUCCUUUCGAUCCAAUUCAGGAGAGGAAGUGGUGGGAUGCAGCUGCCGGUUCAUGGAUACCUCUGCAGUUCAUGCCGGUAGGCCUGCACUUGCAUGGGUUUGCAUGACCUGGGAGAUGAACCUGCCAUUGUGUUCCUCUAUUGAUUGGAUUGAAGGGAGCUCCGGCUACACCUA


mirna_acc: MI0001096
mirna_id: osa-MIR159e
description: Oryza sativa miR159e stem-loop
organism: osa
sequence:
GAUGAAGAAGAAGAGCUCCCUUUCGAUCCAAUUCAGGAGAGGAAGUGGUAGGAUGCAGCUGCCGGUUCAUGGAUACCUCUGGAGUGCAGGGCAAAUAGUCCUACCCUUUCAUGGGUUUGCAUGACUCGGGAGAUGAACCCGCCAUUGUCUUCCUCUAUUGAUUGGAUUGAAGGGAGCUCCUCUAGCUACAU


mirna_acc: MI0001097
mirna_id: osa-MIR159f
description: Oryza sativa miR159f stem-loop
organism: osa
sequence:
GAAGAAGAAGACGAGCUCCCUUCGAUCCAAUCCAGGAGAGGAAGUGGUAGGAUGCAGCUGCCGGUUCAUGGAUACCUCUGCAGUGCAUGUCGUAGGCUUGCACUUGCAUGGGUUUGCAUGACCCGGGAGAUGAACCCACCAUUGUCUUCCUCUUAUGCUUGGAUUGAAGGGAGCUCUACACCUCUCUC


mirna_acc: MI0001098
mirna_id: osa-MIR319a
description: Oryza sativa miR319a stem-loop
organism: osa
sequence:
UGUGUAAGAAGAGAGCUCUCUUCAGUCCACUCUCAGAUGGCUGUAGGGUUUUAUUAGCUGCCGAAUCAUCCAUUCACCUACCAAGAAAGUUGCAGGAGUGUAUCUCUUGGUAGCGGACUGGAUGACGCGGGAGCUAAAAUUUAGCUCUGCGCCGUUUGUGGUUGGACUGAAGGGUGCUCCCUUGCUCAAGC


mirna_acc: MI0001099
mirna_id: osa-MIR319b
description: Oryza sativa miR319b stem-loop
organism: osa
sequence:
GAUGGAUGGAAGAGAGCGUCCUUCAGUCCACUCAUGGGCGGUGCUAGGGUCGAAUUAGCUGCCGACUCAUUCACCCACAUGCCAAGCAAGAAACGCUUGAGAUAGCGAAGCUUAGCAGAUGAGUGAAUGAAGCGGGAGGUAACGUUCCGAUCUCGCGCCGUCUUUGCUUGGACUGAAGGGUGCUCCCUCCUCCUCGA


mirna_acc: MI0001100
mirna_id: osa-MIR160e
description: Oryza sativa miR160e stem-loop
organism: osa
sequence:
GUAGGGGAUAUGCCUGGCUCCCUGUAUGCCGCUCGCAUGGCUGCCAACCCAAUGAACUCGAUCUCGUUGUUGGCCGCUGCGUACGGCGUGCGAGGUGCCAAGCAUGGCCCUCUU

comment:
This sequence is a predicted paralogue of the previously identified miR160 family [1].  It is predicted to target mRNAs coding for Auxin Response Factors (ARF transcription factors). 


mirna_acc: MI0001101
mirna_id: osa-MIR160f
description: Oryza sativa miR160f stem-loop
organism: osa
sequence:
GGAUUAACGCUGCCUGGCUCCCUGAAUGCCAUCCGAGAAGCGUGCCGCUGUGGCCGGCUGCUUCCUGGUUGGCAUUGAGGGAGUCAUGCAGGGUUUGCUC

comment:
This sequence is a predicted paralogue of the previously identified miR160 family [1].  It is predicted to target mRNAs coding for Auxin Response Factors (ARF transcription factors). 


mirna_acc: MI0001102
mirna_id: osa-MIR162b
description: Oryza sativa miR162b stem-loop
organism: osa
sequence:
UGGGUGAUGCCUGGGCGCAGUGGUUUAUCGAUCUCUUCCCUGCCUUGUGCUGCUCCGAUCGAUGCCCGUGCUGAUUCUUGAUAAUAUACAACGCAGGAAUCGAUCGAUAAGCCUCUGCAUCCAGAUCUCACUUU

comment:
This sequence is a predicted paralogue of the previously identified miR162 family [1].  It is predicted to target mRNAs coding for DICER-LIKE 1 (DL1) proteins. 


mirna_acc: MI0001103
mirna_id: osa-MIR164c
description: Oryza sativa miR164c stem-loop
organism: osa
sequence:
AGGUUCUUGUUGGAGAAGCAGGGUACGUGCAAAAUGCACACCGGUUGGUCGAGCUAAUUAACAAGCUCUGACGACCAUGGUGAUCGAAUGCACGUGCUCCCCUUCUCCACCAUGGCCUU

comment:
This sequence is a predicted paralogue of the previously identified miR164 family [1].  It is predicted to target mRNAs coding for NAC domain transcription factors. 


mirna_acc: MI0001105
mirna_id: osa-MIR164e
description: Oryza sativa miR164e stem-loop
organism: osa
sequence:
UUGUGCAGGGUGGAGAAGCAGGGCACGUGAGCGGCCAUCCAGUGUAGCUUCGCUGCGCGUCCAUGGCGGCGAACGCGCGUGAUCUGGAGUUUGGAUGGUCGUUCAUGUGUCCGUCUUCUCCACCGAGCACUG


mirna_acc: MI0001106
mirna_id: osa-MIR166j
description: Oryza sativa miR166j stem-loop
organism: osa
sequence:
AGAUAGGUGUUUGGAAUGCAGUUUGAUCCAAGAUCUGCCUAUAUAUAUGGUGUGUAUAUCAUAUCUUGUGAUAUGGGGGAUAUGCAACAGGUGUGUGACAGGGGUAGGUAGAUCUCGGAUCAGGCUUCAUUCCUCACACC

comment:
This sequence is a predicted paralogue of the previously identified miR166 family [1].  It is predicted to target mRNAs coding for HD-Zip transcription factors. 


mirna_acc: MI0001107
mirna_id: osa-MIR166k
description: Oryza sativa miR166k stem-loop
organism: osa
sequence:
AUUAGGUUAAGGGGUUUGUUGUCUGGCUCGAGGCAUCCGGGACUCCGGUUUCUCCUUUCCUACUGGAGGCGCCUAAUUUCCGGCGAGCUCGGAGCCUCGGACCAGGCUUCAAUCCCUUUAACCAUGC

comment:
This sequence is a predicted paralogue of the previously identified miR166 family [1].  It is predicted to target mRNAs coding for HD-Zip transcription factors. 


mirna_acc: MI0001108
mirna_id: osa-MIR166l
description: Oryza sativa miR166l stem-loop
organism: osa
sequence:
GUUAGGUUAAGGGGAUUGUUGUCUGGUUCAAGGUCUCCACAUUGUGCAAAAUGUUCAUUCAUGGAGGCACAGGAUGCUUGGUGAUCUCGGACCAGGCUUCAAUCCCUUUAACCAGCA

comment:
This sequence is a predicted paralogue of the previously identified miR166 family [1].  It is predicted to target mRNAs coding for HD-Zip transcription factors. 


mirna_acc: MI0001109
mirna_id: osa-MIR167d
description: Oryza sativa miR167d stem-loop
organism: osa
sequence:
CAUUAGGAGCUGAAGCUGCCAGCAUGAUCUGAUGAGUGCUUAUUAGGUGAGGGCAGAAUUGACUGCCAAAACAAAGAUCAGAUCAUGCUGUGCAGUUUCAUCUGCUUGUG

comment:
This sequence is a predicted paralogue of the previously identified miR167 family [1].  It is predicted to target mRNAs coding for Auxin Response Factors (ARF transcription factors). 


mirna_acc: MI0001110
mirna_id: osa-MIR167e
description: Oryza sativa miR167e stem-loop
organism: osa
sequence:

comment:
This sequence is a predicted paralogue of the previously identified miR167 family [1].  It is predicted to target mRNAs coding for Auxin Response Factors (ARF transcription factors). 


mirna_acc: MI0001111
mirna_id: osa-MIR167f
description: Oryza sativa miR167f stem-loop
organism: osa
sequence:
CACAAGUGGAUGAAGCUGCCAGCAUGAUCUGAUCACAGUAGUUCUCUAGCUGAUGAUGAUUUACAAAACCUAGAGACAUGCAUCAGAUCAUCUGGCAGUUUCAUCUUCUCAUG

comment:
This sequence is a predicted paralogue of the previously identified miR167 family [1].  It is predicted to target mRNAs coding for Auxin Response Factors (ARF transcription factors). 


mirna_acc: MI0001113
mirna_id: osa-MIR167h
description: Oryza sativa miR167h stem-loop
organism: osa
sequence:
CACAAGUUGGUGAAGCUGCCAGCAUGAUCUGAUGAUGAUGAUGAUCCACCUCUCUCAUCUGUGUUCUUGAUUAAUUACGGAUCAAUCGAUCAGGUCAUGCUGUAGUUUCAUCUGCUGGUU


mirna_acc: MI0001114
mirna_id: osa-MIR167i
description: Oryza sativa miR167i stem-loop
organism: osa
sequence:


mirna_acc: MI0001115
mirna_id: osa-MIR168a
description: Oryza sativa miR168a stem-loop
sequence: CGCCUCGGGCUCGCUUGGUGCAGAUCGGGACCCGCCGCCGCCGCUGCCGGGGCCGGAUCCCGCCUUGCACCAAGUGAAUCGGAGCCG
organism: osa
comment:
This sequence is a predicted paralogue of the previously identified miR168 family [1].  It is predicted to target mRNAs coding for the ARGONAUTE protein. 


mirna_acc: MI0001116
mirna_id: osa-MIR168b
description: Oryza sativa miR168b stem-loop
organism: osa
sequence:
UGGUCUUGUGAGGCUUGGUGCAGCUCGGGAACUGUUCUUGAUGGACUGGCAGGAACUCCAUGUCCACCACUGCCACUCCUGUGUUGUGGCAUUCCUCCUUGCCGUU

comment:
This sequence is a predicted paralogue of the previously identified miR168 family [1].  It is predicted to target mRNAs coding for the ARGONAUTE protein. 


mirna_acc: MI0001117
mirna_id: osa-MIR169b
description: Oryza sativa miR169b stem-loop
organism: osa
sequence:
GAACGGAAUGCAGCCAAGGAUGACUUGCCGGUACGUGUAUGCAUGUUUCAAGGUACUAUAUGUGCCCCCAACUGUUUUAGAUCCAUGCUGACAUUUUCCGGCAAGUUGUCCUUGGCUACGUCUUGUUC

comment:
This sequence is a predicted paralogue of the previously identified miR169 family [1].  It is predicted to target mRNAs coding for the CCAAT Binding Factor (CBF) and HAP2-like transcription factors. 


mirna_acc: MI0001118
mirna_id: osa-MIR169c
description: Oryza sativa miR169c stem-loop
organism: osa
sequence:
GAACGGGAUGCAGCCAAGGAUGACUUGCCGGCUCCUGGUAUUGGGGGAAUCUCAGCUUUGCUGAAGCGCCUUGGAGUUAGCCGGCAAGUCUGUCCUUGGCUACACCUAGCUC

comment:
This sequence is a predicted paralogue of the previously identified miR169 family [1].  It is predicted to target mRNAs coding for the CCAAT Binding Factor (CBF) and HAP2-like transcription factors. 


mirna_acc: MI0001119
mirna_id: osa-MIR169d
description: Oryza sativa miR169d stem-loop
organism: osa
sequence:
AUUUAUCGUGUAGCCAAGGAUGAAUUGCCGGCGUUUCACGCUGUUGAUGGUGCGUGCAUAUAUAAGUUGGCGCCGGCAAGUCAUUUCAGGCUACAUGUUUGCC


mirna_acc: MI0001120
mirna_id: osa-MIR169e
description: Oryza sativa miR169e stem-loop
organism: osa
sequence:
GCUGGUUGUGUAGCCAAGGAUGACUUGCCGGCCUGGUUUGUGUUCAUCAGCAAUCCAGCAUAUGCUGUAUUGCCGUGUGUGAUCGAUCGAUGCAUGGACCGGCAAGUUAUUUUCUUUGGCUACAUUACAACC


mirna_acc: MI0001121
mirna_id: osa-MIR169f
description: Oryza sativa miR169f stem-loop
organism: osa
sequence:


mirna_acc: MI0001122
mirna_id: osa-MIR169g
description: Oryza sativa miR169g stem-loop
organism: osa
sequence:
CUGCCUCUGGUAGCCAAGGAUGACUUGCCUAUUGUGCUCUUCUGAAUGAUGCAGUGCCAUGAUCAGUGUGGCCUGGCUGGUUCAGAUGAGCCGAGAUAGGCAGUCUCCUUGGCUAGCCUGAGUGGC


mirna_acc: MI0001123
mirna_id: osa-MIR169h
description: Oryza sativa miR169h stem-loop
organism: osa
sequence:
UUAGCUCUGGUAGCCAAGGAUGACUUGCCUGUGUCCUUGUGUGUAAGGAUCAUUAAUUAUUAUUCAGAAAAUGAUCCUUUCAGCAGGUUUCAUGGGCAGUCUCCUUGGCUAGCCUGAGUGAU


mirna_acc: MI0001124
mirna_id: osa-MIR169i
description: Oryza sativa miR169i stem-loop
organism: osa
sequence:
GGAAGAGAGCAAGGCUUGCAUGGUGAUAAGGGUGUAGCUCUGGUAGCCAAGGAUGACUUGCCUGUGUCCUUGUGUAGAGGAUCAUUCAGAAAAUGAGCCUUGAACUGGUUCAUAGGCAGUCUCCUUGGCUAGUCUGAGUCGCUCUUAUCACUCAUGUUAGGCUUGCAUCUCGUUGA


mirna_acc: MI0001125
mirna_id: osa-MIR169j
description: Oryza sativa miR169j stem-loop
organism: osa
sequence:
UCGCAUCUGGUAGCCAAGGAUGACUUGCCUGUGUCUCUGCUCAUGUGCAGUAGAAGAAGAUGCAUUUCUAGCUGCUUUCUGCAUAUGUGAUCUCACAGGCAGUCUCCUUGGCUAGCCUGAGCGGC


mirna_acc: MI0001126
mirna_id: osa-MIR169k
description: Oryza sativa miR169k stem-loop
organism: osa
sequence:
UCUGUCUAGAUAGCCAAGGAUGACUUGCCUGUGGCCUCUUGGAGAGAGAGGUGUAGCUUAAUUAGCAGCAUGGUUUGAGCAUUGCUUGAUCGGUUGAUCGCUUCGCUUGCUCUGCAUGAGAUCUUACAGGCAGUCUCCUUGGCUAGUCUGGGCGGC


mirna_acc: MI0001127
mirna_id: osa-MIR169l
description: Oryza sativa miR169l stem-loop
organism: osa
sequence:
UUAUCUCUGAUAGCCAAGGAUGACUUGCCUGUGUCCUCCCUGAAGGAUUAGCAAUUUAAUGAUCCUUUAAGCUGGUUCAUGGGCAGUCUCCUUGGCUAGCCUGAGUGG


mirna_acc: MI0001128
mirna_id: osa-MIR169m
description: Oryza sativa miR169m stem-loop
organism: osa
sequence:
UGAGUCCUGGUAGCCAAGGAUGACUUGCCUGUAUAUUUAUAUAUAUAUGUGUGUGUGAUCAAUGGAUGGAUUGAUCAAGCUGCUUGCAGGCUCAUGCAUAUAUAUGUACAGGCAGUCUCCUUGGCUAGCCCGGCUACC


mirna_acc: MI0001129
mirna_id: osa-MIR169n
description: Oryza sativa miR169n stem-loop
organism: osa
sequence:
CUCCCUUUGGUAGCCAAGAAUGACUUGCCUAUGUGUUUUGCCUUGUGUUGGCUCAUCCAUCCAUCUAUCAGCCGUUGCAGAUUUGCAGUGGCAGAUUAAAGGGUUUCAGAAAGAAAUUCUUGUGAUGGAUGUGCAAUGUGGCUGCAUGGGCCGGUCUUCUUGGCUAGCCAGAGUGGC


mirna_acc: MI0001130
mirna_id: osa-MIR169o
description: Oryza sativa miR169o stem-loop
organism: osa
sequence:
CUCCCUUUGGUAGCCAAGAAUGACUUGCCUACGCUUUUGCCCUCUGUUGGCUCAUCCAUCCGUCUAUCUAUCUGCCAUGGCAGAUGGCAGAUUAAGGGUUUCUGAAAGAAAUUCUUGUGAUAGGAUGUGCAAUGAGGCUGCAUGGGCCGGUCUUCUUGGCUAGCCAGAGUGGC


mirna_acc: MI0001131
mirna_id: osa-MIR169p
description: Oryza sativa miR169p stem-loop
organism: osa
sequence:
GAGCAAGGUGUAGCCAAGGACAAACUUGCCGGAUCAACAGAGAAGGACUGCCAGUCUCCGGCCAAUUAAUUAACCUCGCCGUCGGCCAUCGCCGGCCGGCAAGUCAUCCUUGGCUGCAUCCUGCUC


mirna_acc: MI0001132
mirna_id: osa-MIR169q
description: Oryza sativa miR169q stem-loop
organism: osa
sequence:
CCACUCAGGCUAGCCAAGGAGACUGCCCAUGAACCAGCUUAAAGGAUCAUUAAAUUGCUAAUCCUUCAGGGAGGACACAGGCAAGUCAUCCUUGGCUAUCAGAGAUAA


mirna_acc: MI0001133
mirna_id: osa-MIR171b
description: Oryza sativa miR171b stem-loop
organism: osa
sequence:
GCGACGACGGGAUAUUGGGGCGGUUCAAUCAGAAAGCUUGUGCUCCGGAAGCGAGGAGCUCUACUCUUUUGAUUGAGCCGUGCCAAUAUCACGUCGCAUC

comment:
This sequence is a predicted paralogue of the previously identified miR171 family [1].  It is predicted to target mRNAs coding for SCARECROW-like transcription factors. 


mirna_acc: MI0001135
mirna_id: osa-MIR171d
description: Oryza sativa miR171d stem-loop
organism: osa
sequence:
UUGUAGCUAUGAUGUUGGCCCGGCUCACUCAGAUGGAUCAUCGGUGCAGAAGAGUGCAUGAAUCUGAUGCAGUCUCAGUGUAGUAUGCUCCAUGCUGGAACUUCUGAUUGAGCCGUGCCAAUAUCUCAGCACCAU

comment:
This sequence is a predicted paralogue of the previously identified miR171 family [1].  It is predicted to target mRNAs coding for SCARECROW-like transcription factors. 


mirna_acc: MI0001136
mirna_id: osa-MIR171e
description: Oryza sativa miR171e stem-loop
organism: osa
sequence:
UGGUAGCUAUGAUGUUGGCUCGGCUCACUCAGACGGCAUUGGCGUGAUGCAAAGCAUGCAUGCGUGCUUGCUAGCUCACUUGUGUUUCUGAUUGAGCCGUGCCAAUAUCUUAGUGCUCU


mirna_acc: MI0001137
mirna_id: osa-MIR171f
description: Oryza sativa miR171f stem-loop
organism: osa
sequence:
GGGAGAGUGCGAUGUUGGCAUGGUUCAAUCAAACCGGGCAAACUUAUGCACUAGCUAAGCAAGAUGCAGGGAUAUGCAGUAUGGUUUUGUUUGGUCUGAUUGAGCCGUGCCAAUAUCACAAGCUUGC


mirna_acc: MI0001139
mirna_id: osa-MIR172a
description: Oryza sativa miR172a stem-loop
organism: osa
sequence:
GUGUUUGCGGGCGUGGCAUCAUCAAGAUUCACAUCCAUGCAUAUAUCACAAGACGCACAUAUACAUCCGAUUUGGCUGAGAAUCUUGAUGAUGCUGCAUCCGCAGACAA

comment:
This sequence is a predicted paralogue of the previously identified miR172 family [1].  It is predicted to target mRNAs coding for APETALA2-like transcription factors. 


mirna_acc: MI0001140
mirna_id: osa-MIR172b
description: Oryza sativa miR172b stem-loop
organism: osa
sequence:

comment:
This sequence is a predicted paralogue of the previously identified miR172 family [1].  It is predicted to target mRNAs coding for APETALA2-like transcription factors. 


mirna_acc: MI0001141
mirna_id: osa-MIR172c
description: Oryza sativa miR172c stem-loop
organism: osa
sequence:
CUUGUUGCGGGUGCAGCGUCAUCAAGAUUCACGUGUGCCGCACGGCACACGUAUCGGUUUUCAAGUGUAGUCAUCGUGCGUGAAUCUUGAUGAUGCUGCACCAGCAAAGAG


mirna_acc: MI0001142
mirna_id: osa-MIR166g
description: Oryza sativa miR166g stem-loop
organism: osa
sequence:
AGCAUGGUGUCUGGAAUGGAGGCUGAUCCAAGAUCAUUGCUUGGUGCAAAAUACUAGGGCAUUGUUGUAAGUGCCAUUAGUUCUUUUUUGUUUCCGAGUUUGUUAUCGAGGAUCUCGGACCAGGCUUCAUUCCUCACACCGUGCU


mirna_acc: MI0001143
mirna_id: osa-MIR166h
description: Oryza sativa miR166h stem-loop
organism: osa
sequence:
GGUGGCUUGUGGGGAAUGUUGGCUGGCUCGAGGUAUCCACAUCUUAAUUCCUCUCCGGCGAUCGAGCCGGCUCGGGCGUGUGGAAGCGUCGGACCAGGCUUCAUUCCUCGCAAGCCGAU


mirna_acc: MI0001144
mirna_id: osa-MIR166i
description: Oryza sativa miR166i stem-loop
organism: osa
sequence:
AGAUAGGUGUUUGGAAUGCAGUUUGAUCCAAGAUCUGCCUAUAUAUAUGGUGUGUAUAUCAUAUCUUGUGAUAUGGGGGAUAUGCAACAGGUGUGUGACAGGGGUAGGUAGAUCUCGGAUCAGGCUUCAUUCCUCACACCAAUAC


mirna_acc: MI0001147
mirna_id: osa-MIR171h
description: Oryza sativa miR171h stem-loop
organism: osa
sequence:
AGAAGAAGAGGACAUGGUUUGGUAUUGUUUCGGCUCAUGUCGUUCACACAGAUGUGAGCCGAACCAAUAUCACUCAUGUAUUCUUCAUUCAGAGAACUUCU


mirna_acc: MI0001148
mirna_id: osa-MIR393b
description: Oryza sativa miR393b stem-loop
organism: osa
sequence:
UCGGCCUGAGGAAACUAGUGGAGGACUCCAAAGGGAUCGCAUUGAUCUGGCUAGCUAUCUCGAUCGAUCGCCUCAUCGAUCGACGACGACGUGCGUGAUCGAUCAGUGCAAUCCCUUUGGAAUUUUCCUCUU


mirna_acc: MI0001149
mirna_id: osa-MIR408
description: Oryza sativa miR408 stem-loop
organism: osa
sequence:


mirna_acc: MI0001150
mirna_id: hsa-mir-196b
description: Homo sapiens miR-196b stem-loop
sequence: ACUGGUCGGUGAUUUAGGUAGUUUCCUGUUGUUGGGAUCCACCUUUCUCUCGACAGCACGACACUGCCUUCAUUACUUCAGUUG
organism: hsa
comment:
miR-196b is predicted based on sequence homology to miR-196a [1].  Yekta et al. report that miR-196 miRNAs are expressed from HOX gene clusters in mammals, and that HOX genes in these clusters are targets of miR-196. Indeed, HOXB8 mRNA was shown to be a natural target for miR-196-directed cleavage through a perfectly complementary miR-target site.  Other HOX genes have imperfect miR-196 complementary sites indicative of regulation by translational repression [1].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0001151
mirna_id: mmu-mir-196b
description: Mus musculus miR-196b stem-loop
sequence: AACUGGUCGGUGAUUUAGGUAGUUUCCUGUUGUUGGGAUCCACCUUUCUCUCGACAGCACGACACUGCCUUCAUUACUUCAGUUG
organism: mmu
comment:
miR-196b is predicted based on sequence homology to miR-196a [1].  Yekta et al. report that miR-196 miRNAs are expressed from HOX gene clusters in mammals, and that HOX genes in these clusters are targets of miR-196. Indeed, HOXB8 mRNA was shown to be a natural target for miR-196-directed cleavage through a perfectly complementary miR-target site.  Other HOX genes have imperfect miR-196 complementary sites indicative of regulation by translational repression [1].  Landgraf et al. confirm expression of miR-196b in mouse by cloning [2]. 


mirna_acc: MI0001152
mirna_id: rno-mir-196b
description: Rattus norvegicus miR-196b stem-loop
sequence: AACUGGUCGGUGAUUUAGGUAGUUUCCUGUUGUUGGGAUCCACCUUUCUCUCGACAGCACGACACUGCCUUCAUUACUUCAGUUG
organism: rno
comment:
miR-196b is predicted based on sequence homology to miR-196a [1].  Yekta et al. report that miR-196 miRNAs are expressed from HOX gene clusters in mammals, and that HOX genes in these clusters are targets of miR-196. Indeed, HOXB8 mRNA was shown to be a natural target for miR-196-directed cleavage through a perfectly complementary miR-target site.  Other HOX genes have imperfect miR-196 complementary sites indicative of regulation by translational repression [1].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].  The ends of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0001154
mirna_id: osa-MIR172d
description: Oryza sativa miR172d stem-loop
organism: osa
sequence:
AAACAGUCGGUGCUUGCAGGUGCAGCACCAUCAAGAUUCACAUCGAGUUCAUCCCUAAACGAGAUCGAGGUUGGCUGACUAUAUGUGAUGAGAAUCUUGAUGAUGCUGCAUCAGCAAACGCUCGACUACU


mirna_acc: MI0001155
mirna_id: osa-MIR171i
description: Oryza sativa miR171i stem-loop
organism: osa
sequence:
UAAAAAGAGGUAUUGGCGUGCCUCAAUCCGAAGGCAUGGCUGAUUACAGGCACCUCGACCGAUCUAGCGCAUGCAGCCAUGUUUCUUGGAUUGAGCCGCGUCAAUAUCUCUCCUUGCUUC


mirna_acc: MI0001156
mirna_id: osa-MIR167j
description: Oryza sativa miR167j stem-loop
organism: osa
sequence:
UUGUGAUGUGUGCACCUUAAGCAGCUGAAGCUGCCAGCAUGAUCUGAUCUUUUGCGAUCUCUUUUUUUAUCUGAAUAAGUUGAUGGAAAUAUUGGGUUCCUAAGAUUCAGAUCGUGCUGCGCAGUUUCAUCUGCUAAUCGAUGCACUACACUGUGAAUUU


mirna_acc: MI0001157
mirna_id: osa-MIR166m
description: Oryza sativa miR166m stem-loop
organism: osa
sequence:


mirna_acc: MI0001158
mirna_id: osa-MIR166n
description: Oryza sativa miR166n stem-loop
organism: osa
sequence:
UGAUCCAUGGCUGUUGAGAGGAAUGACGUCCGGUCUGAAGAUCGCCGUCCCCAGGCGGUGGCUUCGGACCAGGCUUCAUUCCCCAUGACUCAUGGAACCC


mirna_acc: MI0001159
mirna_id: osa-MIR164f
description: Oryza sativa miR164f stem-loop
organism: osa
sequence:


mirna_acc: MI0001160
mirna_id: mmu-mir-409
description: Mus musculus miR-409 stem-loop
sequence: UGGUACUCGGAGAGAGGUUACCCGAGCAACUUUGCAUCUGGAGGACGAAUGUUGCUCGGUGAACCCCUUUUCGGUAUCA
organism: mmu
comment:
Seitz et al. predicted a cluster of 40 miRNAs in the imprinted human 14q32 domain, and confirmed the expression of a subset by Northern blot or primer extension in mouse, including the miR-409-5p [1].  The 3' end of miR-409-5p was not determined and is predicted based on a miRNA length of 23 nts.  Landgraf et al. later confirm expression of mature miRNAs from both arms of the hairpin [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0001161
mirna_id: mmu-mir-410
description: Mus musculus miR-410 stem-loop
sequence: GGGUACUUGAGGAGAGGUUGUCUGUGAUGAGUUCGCUUUAUUAAUGACGAAUAUAACACAGAUGGCCUGUUUUCAAUACCA
organism: mmu
comment:
Seitz et al. predicted a cluster of 40 miRNAs in the imprinted human 14q32 domain, and confirmed the expression of a subset by Northern blot or primer extension in mouse [1].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0001162
mirna_id: mmu-mir-376b
description: Mus musculus miR-376b stem-loop
sequence: UGGUAUUUAAAAGGUGGAUAUUCCUUCUAUGGUUACGUGCUUCCUGGAUAAUCAUAGAGGAACAUCCACUUUUUCAGUAUCA
organism: mmu
comment:
Seitz et al. predicted a cluster of 40 miRNAs in the imprinted human 14q32 domain, and confirmed the expression of a subset by Northern blot or primer extension in mouse [1].  The mature miR-376b products have been shown to be modified by A to I edits [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4]. 


mirna_acc: MI0001163
mirna_id: mmu-mir-411
description: Mus musculus miR-411 stem-loop
sequence: UGGUACUUGGAGAGAUAGUAGACCGUAUAGCGUACGCUUUAUCUGUGACGUAUGUAACACGGUCCACUAACCCUCAGUAUCA
organism: mmu
comment:
Seitz et al. predicted a cluster of 40 miRNAs in the imprinted human 14q32 domain, and confirmed the expression of a subset by Northern blot or primer extension in mouse, including the mature sequence from the 3' arm of this hairpin [1].  Landgraf et al. later showed that the 5' product is the predominant one [2].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0001164
mirna_id: mmu-mir-412
description: Mus musculus miR-412 stem-loop
sequence: GGGUAUGGGACGGAUGGUCGACCAGCUGGAAAGUAAUUGUUUCUAAUGUACUUCACCUGGUCCACUAGCCGUCGGUGCCC
organism: mmu
comment:
Seitz et al. predicted a cluster of 40 miRNAs in the imprinted human 14q32 domain, and confirmed the expression of a subset by Northern blot or primer extension in mouse [1].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0001165
mirna_id: mmu-mir-370
description: Mus musculus miR-370 stem-loop
sequence: AGACGGAGAGACCAGGUCACGUCUCUGCAGUUACACAGCUCAUGAGUGCCUGCUGGGGUGGAACCUGGUUUGUCUGUCU
organism: mmu
comment:
Seitz et al. predicted a cluster of 40 miRNAs in the imprinted human 14q32 domain, and confirmed the expression of a subset by Northern blot or primer extension in mouse [1].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0001166
mirna_id: gga-mir-29a
description: Gallus gallus miR-29a stem-loop
sequence: ACCCCUUUAGAGGAUGACUGAUUUCUUUUGGUGUUCAGAGUCAAUAAUAUUUUCUAGCACCAUUUGAAAUCGGUUAUAGUGAUUGGGGA
organism: gga
comment:
This sequence is a predicted homologue of a verified miRNA from human, mouse or rat.  Its expression has not been validated in chicken. 


mirna_acc: MI0001169
mirna_id: gga-mir-135a-2
description: Gallus gallus miR-135a-2 stem-loop
organism: gga
sequence:
AGAUAAAUUCACUCUAGUGUUUUAUGGCUUUUUAUUCCUAUGUGAUAGUAAUAAAGUCUCAUGUAGGGAUGGAAGCCAUGAAAUACAUUGUGAAAAAUCA

comment:
This sequence is a predicted homologue of a verified miRNA from human, mouse or rat.  Its expression has not been validated in chicken. 


mirna_acc: MI0001200
mirna_id: gga-mir-216a
previous_mirna_id: gga-mir-216
description: Gallus gallus miR-216 stem-loop
organism: gga
sequence:
GAUGGCUGUGAAUUGGCUUAAUCUCAGCUGGCAACUGUGAGCAGUUAAUAAUUCUCACAGUGGUAUCUGGGAUUAUGCUAAACACAGCAAUUUCUUUGCUCUAAUG


mirna_acc: MI0001201
mirna_id: gga-mir-217
description: Gallus gallus miR-217 stem-loop
organism: gga
sequence:
AAAGUCACUGCAGAGUUCUUGAUGUCGCAGAUACUGCAUCAGGAACUGAUUGGAUAAUAAUCAGUCACCAUCAGUUCCUAAUGCAUUGCCUUCAGCAUCUAAACAAG


mirna_acc: MI0001203
mirna_id: gga-mir-215
description: Gallus gallus miR-215 stem-loop
organism: gga
sequence:
UCAGUAAGAACUGGUGUCCAGGAAAAUGACCUAUGAAUUGACAGACUGCUUUCAAAAUGUGCCUGUCAUUUCUAUAGGCCAAUAUUCUGUGCACUUUUCCUACUU


mirna_acc: MI0001208
mirna_id: gga-mir-223
description: Gallus gallus miR-223 stem-loop
organism: gga
sequence:
CUGCAGUGCAGCACUGCGUGUAUUUGACAAGCUGAGUUUGACACUCAGUCUGGCAGAGUGUCAGUUUGUCAAAUACCCCAAGUGAGGCACUUGCUGAGCA


mirna_acc: MI0001212
mirna_id: gga-mir-218-1
description: Gallus gallus miR-218-1 stem-loop
organism: gga
sequence:
UGAUAAUGUAGCGAGAUUUUCUGUUGUGCUUGAUCUAACCAUGUGGUUGUGAGGUAUGAGUAAAACAUGGUUCUGUCAAGCACCAUGGAACGUCACGCAGCUUUCUACA


mirna_acc: MI0001216
mirna_id: gga-mir-10b
description: Gallus gallus miR-10b stem-loop
organism: gga
sequence:
CAGAACGUUAUUACGUUGUCUAUAUAUACCCUGUAGAACCGAAUUUGUGUGAUAUUCAUAUAGUCACAGAUUCGAUUCUAGGGGAAUAUAUGGUCGAUGCAAAAACUUCA


mirna_acc: MI0001218
mirna_id: gga-mir-181a-1
previous_mirna_id: gga-mir-213
description: Gallus gallus miR-181a-1 stem-loop
organism: gga
sequence:
UGUAGUGGUUGCUUCAGUGAACAUUCAACGCUGUCGGUGAGUUUGGAAUUUAAGUGAAAACCAUCGACCGUUGAUUGUACCCUCCAGCUAACCAUCCUCCUCCU


mirna_acc: MI0001220
mirna_id: gga-mir-199-2
previous_mirna_id: gga-mir-199a-1;gga-mir-199a-2
description: Gallus gallus miR-199-2 stem-loop
organism: gga
sequence:
GAAGCGUCCGGAGAUCCUGCUCCGUCGCCCCAGUGUUCAGACUACCUGUUCAGGACAAUGCUGUUGUACAGUAGUCUGCACAUUGGUUAGACUGGGCAAGGGAAAGCA

comment:
Chicken has two loci predicted to express miR-199.  mir-199-2 (MIR:MI0001220) is homologous to mir-199a-2 in human (MIR:MI0000281) and mouse (MIR:MI0000713).  mir-199-1 (MIR:MI0001245) is homologous to mir-199b in human (MIR:MI0000282) and mouse (MIR:MI0000714).  The expression of chicken miR-199 has been verified experimentally [2]. 


mirna_acc: MI0001225
mirna_id: gga-mir-204-2
description: Gallus gallus miR-204-2 stem-loop
organism: gga
sequence:
CUACUGAGACUGUGUGACCUGUGGGCUUCCCUUUGUCAUCCUAUGCCUGGAGAUCACAGUGAGGCAGGGACAGCAAAGGGAUGCUCAGCUGUCGUCUCUUC


mirna_acc: MI0001232
mirna_id: gga-let-7d
description: Gallus gallus let-7d stem-loop
organism: gga
sequence:
AUUGGGCUCCUAGGAAGAGGUAGUGGGUUGCAUAGUUUUAGGGCAGGGAUUUUGCUCACAAGGAGGUAACUAUACAACCUGCUGCCUUUCUUAGGGCUUUAUU


mirna_acc: MI0001251
mirna_id: gga-mir-34a
description: Gallus gallus miR-34a stem-loop
organism: gga
sequence:
GCCAGCUGUGAGUGUUUCUUUGGCAGUGUCUUAGCUGGUUGUUGUGAGCAAUAGUUAAGGAAGCAAUCAGCAAGUAUACUGCCCUAGAAGUGCUACACAUUGUUGGGCC


mirna_acc: MI0001271
mirna_id: gga-mir-204-1
description: Gallus gallus miR-204-1 stem-loop
organism: gga
sequence:
GUCAACAGUGUCUGUUCAUGUGACCCGUGGACUUCCCUUUGUCAUCCUAUGCCUGAGAAUAUAUGAAGGGGGCUGGGAAGGCAAAGGGACGUUCAACUGUCAUC


mirna_acc: MI0001272
mirna_id: gga-mir-7-1
description: Gallus gallus miR-7-1 stem-loop
organism: gga
sequence:
UGGAUGUUGGUCUAGUUCUGUGUGGAAGACUAGUGAUUUUGUUGUUUUUAGAUAAUUAAAUUGACAACAAAUCACAGUCUGCCAUAUGGCACAGAUCAUGCCUCUACAG


mirna_acc: MI0001279
mirna_id: gga-mir-7b
previous_mirna_id: gga-mir-7b-1
description: Gallus gallus miR-7b stem-loop
organism: gga
sequence:
UGGACAUUGGUCUAGUUCUGUGUGGAAGACUAGUGAUUUUUGUUGUUUUUAGAUAACUAAAUUGACAACAAAUCACAGUCUACCAUAUGGCACAGACUAUGCCUCUACAG


mirna_acc: MI0001282
mirna_id: gga-mir-196-3
description: Gallus gallus miR-196-3 stem-loop
organism: gga
sequence:
UUUCAUGCAGCUGAUCUGUGGUUUAGGUAGUUUCAUGUUGUUGGGAUUGGCUUUUAGCUCGGCAACAAGAAACUGCCUUAAUUACGUCAGUUAGUCUUCAUCAAGGGC


mirna_acc: MI0001294
mirna_id: dps-mir-2c
description: Drosophila pseudoobscura miR-2c stem-loop
organism: dps
sequence:
UGGUAUCCUUACUUUCAGUGUCAUCAAAAAUGGCUGAAGAAAGAUAUAUUUGCAUUUGAAGCGUAUCACAGCCAGCUUUGAUGGGCAUUGCAAUGAGCAUCGA


mirna_acc: MI0001317
mirna_id: dps-mir-34
description: Drosophila pseudoobscura miR-34 stem-loop
organism: dps
sequence:
AAUUGGCUAUGCGCUUUGGCAGUGUGGUUAGCUGGUUGUGUAGCCAAAAUAUUGCCUUUGACCAUUCACAGCCACUAUCUUCACUGCCGCCGCGACAAGC


mirna_acc: MI0001321
mirna_id: dps-mir-92b
description: Drosophila pseudoobscura miR-92b stem-loop
organism: dps
sequence:
UAAAACGUCACCUGAUGUAGGCCGUGCCCAGUGCUUAUUUGUCGUUGUUUGAAAAUACAAAUUGCACUAGUCCCGGCCUGCAGAGAGUGUCGCACACAAC


mirna_acc: MI0001322
mirna_id: dps-mir-100
description: Drosophila pseudoobscura miR-100 stem-loop
organism: dps
sequence:
CCAUUAACAGAAACCCGUAAUUCCGAACUUGUGCUGUUUUAUAUCUGUUACAAGACCGGCAUUAUGGGAGUCUGUCAAUGCAAACAACUGGUUUUUGGCA


mirna_acc: MI0001326
mirna_id: dps-mir-184
description: Drosophila pseudoobscura miR-184 stem-loop
organism: dps
sequence:
GGUCGACCGGUGCAUUCGUACCCUUAUCAUUCUCGCGCCCCGUGUGCAUUAAAAGACAACUGGACGGAGAACUGAUAAGGGCUCGUAUCACCAACUCAUC


mirna_acc: MI0001328
mirna_id: dps-mir-219
description: Drosophila pseudoobscura miR-219 stem-loop
organism: dps
sequence:
UAAUUCGAUUUUUAGCUAUGAUUGUCCAAACGCAAUUCUUGUUGAUAUCCAAUACUCAAGGGUUGUGACUGGACAUCGCGGCUCGAAAUAAGAAUACAAC


mirna_acc: MI0001335
mirna_id: dps-mir-277
description: Drosophila pseudoobscura miR-277 stem-loop
organism: dps
sequence:
UUGAAGGUUUUGGGUUGCGUGUCAGGAGUGCAUUUGCACUGAAACAUUCUGAAGCUUGUAAAUGCACUAUCUGGUACGACAUUCCAGAACGUACAAUCUU


mirna_acc: MI0001343
mirna_id: dps-mir-284
description: Drosophila pseudoobscura miR-284 stem-loop
organism: dps
sequence:
GUUGCAGUUCCUGGAAUUAAGUUGACUGUGUAGCCUGGGAAGGCAAGGCUUGAGCACUGCUUCUGAAGUCAGCAACUUGAUUCCAGCAAUUGCGGCCCAA


mirna_acc: MI0001344
mirna_id: dps-mir-285
description: Drosophila pseudoobscura miR-285 stem-loop
organism: dps
sequence:
UCGAAUCGAAGAACUGAGAUCGAUUGGUGCAUAGAUAUCAAGAGGACUCGCUAAUUUUCAACUCUAGCACCAUUCGAAAUCAGUGCUUUUGAUGAGAACC


mirna_acc: MI0001348
mirna_id: dps-mir-289
description: Drosophila pseudoobscura miR-289 stem-loop
organism: dps
sequence:
GAGUUUACAGUGAAAUAAAUAUUUAAGUGGAGCCUGCGACUGGGACUCCAGCUCUCCGACUGGGCUAACUCACUUGAGCGUUUGUUGGCACGUAAAAGAC


mirna_acc: MI0001360
mirna_id: dre-mir-7b
description: Danio rerio miR-7b stem-loop
organism: dre
sequence:
UGAACGCUGGCUUGCUUCUGUGUGGAAGACUUGUGAUUUUGUUGUUGUUAGUUAGAUGAAGUGACAACAAAUCACGGUCUGCCCUACAGCACAGGCCCAGCAUC


mirna_acc: MI0001364
mirna_id: dre-mir-10b-1
previous_mirna_id: dre-mir-10b
description: Danio rerio miR-10b-1 stem-loop
sequence: GUCUAUAUAUACCCUGUAGAACCGAAUUUGUGUGAAAAAAUAACAUUCACAGAUUCGAUUCUAGGGGAGUAUAUGGUC
organism: dre
comment:
The miR-10b sequence described in [1] is offset by 2 nt with respect to that cloned in mouse (MIR:MI0000221). 


mirna_acc: MI0001366
mirna_id: dre-mir-181b-1
description: Danio rerio miR-181b-1 stem-loop
organism: dre
sequence:
CAUGUACGCACCUUCAGUUCUUCAAAGGUCAUAAUCAACAUUCAUUGCUGUCGGUGGGUUUAGUCUUGUAACAGCUCUCUGAACAAUGAAUGUAACUGUGGCCCAGAUU


mirna_acc: MI0001372
mirna_id: dre-mir-196a-1
previous_mirna_id: dre-mir-196a
description: Danio rerio miR-196a-1 stem-loop
organism: dre
sequence:
CGCGCGGCUGGUGCGUGGUUUAGGUAGUUUCAUGUUGUUGGGAUUGGCUUCCUGGCUCGACAACAAGAAACUGCCUUGAUUACGUCAGUUCGUCUUCAUCAAGGGC


mirna_acc: MI0001379
mirna_id: dre-mir-210
description: Danio rerio miR-210 stem-loop
sequence: GCAGGUAAGCCACUGACUAACGCACAUUGCGCCUAUUCUCCACUCCACUGUGCGUGUGACAGCGGCUAACCAG
organism: dre
comment:
Lim et al. cloned this miRNA from D. rerio [1].  The 3' end of the mature sequence was not determined, but was later analysed in a study of many clones in mouse [2].  The most common cloned length is shown here. 


mirna_acc: MI0001381
mirna_id: dre-mir-214
description: Danio rerio miR-214 stem-loop
organism: dre
sequence:
UGACUGAGAGCGUUGUCUGUCUGCCUGUCUACACUUGCUGUGCAGAACUUCCUGCACCUGUACAGCAGGCACAGACAGGCAGACAGAUGGCAGCCCGCCU


mirna_acc: MI0001388
mirna_id: dre-mir-222a
previous_mirna_id: dre-mir-222
description: Danio rerio miR-222 stem-loop
organism: dre
sequence:
GCCGGUGGCUUGUUCGGGUGCUCAUGAGAUGCUCAGUAGUCAGUGUAGAUCCUGUGUCACAAUCAGCAGCUACAUCUGGCUACUGGGUCUCUGAUGGCAUUUUCUGCU


mirna_acc: MI0001390
mirna_id: cbr-mir-353
description: Caenorhabditis briggsae miR-353 stem-loop
organism: cbr
sequence:
GAAGAUAUGCAAAAUAAAAAGCAUGGGCACAAGUAUCAUGUGUUGGUAUCAUUGUUUCAAGUUAUUUGUUGCUAUGGUAUCGAUAAGCAUGCUACGUGUGAAGUGCGACAA

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the confirmed elegans sequence at 3 positions. 


mirna_acc: MI0001392
mirna_id: cbr-mir-64a
previous_mirna_id: cbr-mir-64
description: Caenorhabditis briggsae miR-64 stem-loop
organism: cbr
sequence:
UCAAGAAUCCUCGGCCUCGCCGACCAUGACACUGAAGCGUGUACGGAUGGAAAGUUGAAGCCUUCCGUUCCGCUAGUGUGCCAUGCAACGGCGAGUGCCUUGGCACUUUG

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at 3 positions. 


mirna_acc: MI0001394
mirna_id: cbr-mir-231
description: Caenorhabditis briggsae miR-231 stem-loop
organism: cbr
sequence:
CUAGCACCUCAAUGUUGUUCUGUCUGUUUCCAUAGCUUAUAUUGUAAGGUACUUAUAAGCUCGUGAACAACAGGCAGGACAACUGGAAGUGGUGUUUUUUUUCA

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at 2 positions. 


mirna_acc: MI0001395
mirna_id: cbr-mir-356
description: Caenorhabditis briggsae miR-356 stem-loop
organism: cbr
sequence:
CCUCAUCCAACCAAUGUGGAUGAGCAACGCGAACAAAUCCUCUUAUAAGAGAUUUGCCACGCCGCCGCUCACCACACUGGCUUUCAGAAGGUGCCAGGAAUCAGAAGACGAG

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at the two terminal positions. 


mirna_acc: MI0001396
mirna_id: cbr-mir-83
description: Caenorhabditis briggsae miR-83 stem-loop
organism: cbr
sequence:
GCAGAAGGCACCACUCGAAAAAACUGAGUUUAUGUGUGUACUUGACGGCGAUCAGAGCAACGAUCUAGCACCAUAUAAAUUCAGUGUUUUCGUGGACAGAGAGCCAAGUUU

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at 2 positions at the 3' end. 


mirna_acc: MI0001397
mirna_id: cbr-mir-246
description: Caenorhabditis briggsae miR-246 stem-loop
organism: cbr
sequence:
GAAAAGUCCUAGUGAUAAAACAGCACCUGGCCAAUAUUAUGUAAUAUCAGAAGCAAAUUGAUUAUUACAUGUAUUGGGUAGGAGCUGUUCAAGCUAUGGUUAAAUGGGU

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at 2 positions. 


mirna_acc: MI0001398
mirna_id: cbr-mir-51
description: Caenorhabditis briggsae miR-51 stem-loop
organism: cbr
sequence:
CGUCAUCGAAUCUCAACGUCAAACGGAUCCGAAGACGUCCAUCUACCCGUAGCUCCUUGCCAUGUUACUGGUAAAAGUGAACAUGGAAGUUGGUCCGGGUACAUGGCCAGUAGGAGUUAUGAAGACGUGUUGAGGUUUCAAGAUU

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at 2 positions. 


mirna_acc: MI0001400
mirna_id: cbr-mir-357-1
previous_mirna_id: cbr-mir-357
description: Caenorhabditis briggsae miR-357-1 stem-loop
organism: cbr
sequence:
CUACAUCAGAAGAGACAGCGAAUCCCGGCAAUCACCGUGCAUUUUCAUCUACCAGAGGCACUAAUGAAAAUGCCAGUCAUUGACGGAAUUCGUUGAAUCUGGAAUUAAAGCAU

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at 4 positions. 


mirna_acc: MI0001401
mirna_id: cbr-mir-253
description: Caenorhabditis briggsae miR-253 stem-loop
organism: cbr
sequence:
AACAUUUUUCGAGUUUCAGUCCUUCUCACACACCUCACUAACACUAACUACAGAUUUCUAGAUGUUAGUAGGCGUUGUGGGAAGGGCGGAGAUGACGAAUACUUUGUGCA


mirna_acc: MI0001402
mirna_id: cbr-mir-70
description: Caenorhabditis briggsae miR-70 stem-loop
organism: cbr
sequence:
AAAACGGAUGUAUCUCUAGGAACAGCCAUCAUGUAAGACAUUUCUAACUGAAAGAUGUAAUACGUGAUUGGUGUUCCCAGAGUUUACCGUUUCCUUCUUUUAUUUUUCCAAA

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at 4 positions. 


mirna_acc: MI0001403
mirna_id: cbr-mir-358
description: Caenorhabditis briggsae miR-358 stem-loop
organism: cbr
sequence:
ACUCCCCAUUCGGAUUGAUACCCGACUUCCGGAUACCAAAUGUCAUAUCCAACUCGUUUCGUCAAUUGGUAUCCUUAGUCGUGGUCUCAAUCUGUACACGGCGAGAGUGUUGU

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at 4 positions. 


mirna_acc: MI0001404
mirna_id: cbr-mir-61
description: Caenorhabditis briggsae miR-61 stem-loop
organism: cbr
sequence:
UACUUGAUCGGUGUCUCGAGCCGAGUUAAGGCUAAUAGUCCUUCCGGUGUAUGGUAAUGACUAGAACCUUGACUCUGCUCGAGUUACUGAGCUCUUUGACCCCGCCC


mirna_acc: MI0001405
mirna_id: cbr-mir-360
description: Caenorhabditis briggsae miR-360 stem-loop
organism: cbr
sequence:
UUCCAUAAAAAAGCGCCUAGGGUUUUGUGACCGUUGUUACGGUCAAUUCAUGUCUGACACAAUGACCGUAAUCCCGUUCACAACACCUUGUGUGGCUUGAAUAAUGAAAUU

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. 


mirna_acc: MI0001406
mirna_id: cbr-mir-239a
description: Caenorhabditis briggsae miR-239a stem-loop
organism: cbr
sequence:
GAGAAUGACGAUCCAAGUUUAUGCGAUUUUUGUACUACAAUUAGGUACUGGACACCAGCAGCGAGUGUAUCCAGAAUCUAUACUAGUACAAAAAUAGCUAACAGGAUUAAGAU


mirna_acc: MI0001407
mirna_id: cbr-mir-249
description: Caenorhabditis briggsae miR-249 stem-loop
organism: cbr
sequence:
AUUUGUUAUUUUGUGCGCCCUCAAUGCUACUAGCAACGCUCAAAAAUCACUGUACGACAAAUGACUAUAUUUUGUCACAGGAUUUUUGAGUGUUGCUAGUCGGAGAAGG


mirna_acc: MI0001408
mirna_id: cbr-mir-240
description: Caenorhabditis briggsae miR-240 stem-loop
organism: cbr
sequence:
CGCUGUCUUUAUUUUGAAACUGUUUUCAAAUCGAGAAUUUCGAGGCCUGAAUGCAAGAACCGUUUUGAGCAUACUGGCCUCCAAAUUUUCGCUUUGAAUUUUAGUUACGCGUG


mirna_acc: MI0001409
mirna_id: cbr-mir-254
description: Caenorhabditis briggsae miR-254 stem-loop
organism: cbr
sequence:
CUCCACUCUAUGCGGGUUGCCGUAUACAGAAGCAUCGAUUUUCACACGCCAUGAUGCGCCUGUGCAAAUCUUUUGCAACUGUAUACGGCGAUUUAGCAGACCAUAUUG


mirna_acc: MI0001410
mirna_id: cbr-mir-239b
description: Caenorhabditis briggsae miR-239b stem-loop
organism: cbr
sequence:
UAGGACAGACAUGCAAUUUUUGUACUGCACAAAAGUACUGACUAUUUCUCAGCGCUUUUGUCCAGUGCAAGAAUGGCAAGAGCUGGUCCAUUUUUUUAGGGAUUAAACAAUU

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at 1 position. 


mirna_acc: MI0001411
mirna_id: cbr-mir-62
description: Caenorhabditis briggsae miR-62 stem-loop
organism: cbr
sequence:
CCCUUGCAACUCGGCUAUUAUAAGGUGGGUUAGAUCCCAUAUCCUUCCGCUUGAUGGAAAUGAUAUGUAAUCUAGCUUACAGGUCUCUCAACAUCUCCAAGACGGUGCUA

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. 


mirna_acc: MI0001412
mirna_id: cbr-mir-55
description: Caenorhabditis briggsae miR-55 stem-loop
organism: cbr
sequence:
AAAAUUGAAUCGUCACAAAGGGGGACUCGGCGGAAAAUAUGGUGGUAUACUACACAGUGAAUAGAUAUACCCGUAUAUUUUUCUGCCGAGCCCCUCCACGACAUCAAUAAGG

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at 3 positions. 


mirna_acc: MI0001413
mirna_id: cbr-mir-84
description: Caenorhabditis briggsae miR-84 stem-loop
organism: cbr
sequence:
UUGCUAUAUAUUCAGCCGUACUGUCUGAAAAUAACAUCUGAGGUAGUUUGCAAUGCUGUCGACGUAACUGAAAAGUCAACAUCAUUCCAACUUCCUCGGCUGUUCAAAAGGCUA


mirna_acc: MI0001414
mirna_id: cbr-mir-354
description: Caenorhabditis briggsae miR-354 stem-loop
organism: cbr
sequence:
CCAGAGCCGACUAAGUGCCUUGGUGCGGCUACAGACGGGUAUCCGGCUCGAUGUUCAUACACCGCGACUCUUUCCUUUUACCUUGUUUGUUGCUGCUCCUUUUGGUUUU

comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae. 


mirna_acc: MI0001415
mirna_id: cbr-mir-35a
previous_mirna_id: cbr-mir-35
description: Caenorhabditis briggsae miR-35 stem-loop
organism: cbr
sequence:
UAGUCCAGUUCUGGACAUUCGCGGGUUUUUUCCUUCGGUGAUAUUCGAAGAAUCGCUAUCACCGGGUGAAAACUUGCAAGUGUCUUGCUUCGACUGGUCAUUUUGCUUGUAU


mirna_acc: MI0001416
mirna_id: cbr-mir-36
description: Caenorhabditis briggsae miR-36 stem-loop
sequence: UGAAACCUUCGGACCAUUGUGAAUUUUUGCUGCGGUGUUACAACUAACAUCUGUAUCACCGGGUGAAAAUUCGCAAUGGUCCGAUGGGUAUUCA
organism: cbr
comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at 2 teminal 3' end positions. 


mirna_acc: MI0001419
mirna_id: cbr-mir-39
description: Caenorhabditis briggsae miR-39 stem-loop
sequence: CAGAGAUGCAGGGAGCCCAACUGGUUCUCACUGCAGUGAUAAGCUAUGUUACAGUCUAUCACCGGGUGAAAAACGGUUAGGCUCUUUAAGCAUCUCUG
organism: cbr
comment:
This miRNA is the predicted homologue of a verified C. elegans miRNA [1]. Its expression has not been verified in C. briggsae.  The mature sequence differs from the elegans sequence at 5 positions at the 3' end. 


mirna_acc: MI0001421
mirna_id: cbr-mir-41a
previous_mirna_id: cbr-mir-41
description: Caenorhabditis briggsae miR-41 stem-loop
organism: cbr
sequence:
UGAAAGCAGGUCCCAAAUGCCUUGGUGGUUUUUCGCCGUAGUGAUACAACAUCGAAGCCAUACGAUAUCACCGGGUGAAAAACUCCCAAGGUCGGGACAUUUUUAUUUGU


mirna_acc: MI0001422
mirna_id: cbr-mir-355
description: Caenorhabditis briggsae miR-355 stem-loop
organism: cbr
sequence:
CUACUGAUUAUGAUUAGUCAGCAAUCGGAUGGUUUGUUUUAGCCUGAGCUAUGUGUUAUUGCAUAUUCAUAGCUACUUGCUAAAACAUACCAAUCGAGUUGACUGACAU


mirna_acc: MI0001424
mirna_id: ath-MIR413
description: Arabidopsis thaliana miR413 stem-loop
organism: ath
sequence:
GAUCCAUAGUUUCUCUUGUUCUGCACAUCCACUAACUUCAGGAACCAUGUCCCAGUUUCAGGUUAGAUCAAGUGGGAAAACAAAUGGAAGAUUGUGGCUAUGCAGAAACUGGAACUAUUCGUC

comment:
The status of this sequence as a miRNA has been questioned on the basis of lack of conservation in genomes other than Arabidopsis and rice, moderately poor precursor hairpin structure, lack of identified targets, and low Northern blot signal [2].  This sequence may therefore be removed in subsequent data releases. 


mirna_acc: MI0001425
mirna_id: ath-MIR414
description: Arabidopsis thaliana miR414 stem-loop
organism: ath
sequence:
UCAUCAUUAUCAUCAUCAUCAUAUUCAUCUUCAUCAUCAUCGUCAUCAUCAUCAUCAUCAUCGUAUGAGAAGAUAGAGAAGAGUGAGAGUAUGAGAUUUGAGUUGAGA

comment:
The status of this sequence as a miRNA has been questioned on the basis of lack of conservation in genomes other than Arabidopsis and rice, moderately poor precursor hairpin structure, lack of identified targets, and low Northern blot signal [2].  This sequence may therefore be removed in subsequent data releases. 


mirna_acc: MI0001426
mirna_id: ath-MIR415
description: Arabidopsis thaliana miR415 stem-loop
organism: ath
sequence:
AGAACAGAGCAGAAACAGAACAUAUAUUCUCUGUCUUUUUUUGUGGCAAAAGUAAAUGGCGAGAAGACAACUCUUUUACCAUCGAAUGUUCUUGGUUUUAGCUCUUCUCU

comment:
The status of this sequence as a miRNA has been questioned on the basis of lack of conservation in genomes other than Arabidopsis and rice, moderately poor precursor hairpin structure, lack of identified targets, and low Northern blot signal [2].  This sequence may therefore be removed in subsequent data releases. 


mirna_acc: MI0001428
mirna_id: ath-MIR417
description: Arabidopsis thaliana miR417 stem-loop
organism: ath
sequence:
AAAUAUAUUCAAAAGUGGUCAAAACACGUCACUAUUUCCUUUAUGUUUUCCCCUUAUUGAUGGAAAUGGUUAAACAUGAAGGUAGUGAAUUUGUUCGAAUAAUAUGUUGAUAUAUUU


mirna_acc: MI0001430
mirna_id: ath-MIR419
description: Arabidopsis thaliana miR419 stem-loop
organism: ath
sequence:
AAAUUAUGAAUGCUGAGGAUGUUGUUAUUACGAGCAAUGAGAUGUCUUUUUUUAAAAAAAAAAAUUUGGUUGCUUGCUUGCAAGAGGACAUCUUAGCAUCAAAUUU


mirna_acc: MI0001431
mirna_id: ath-MIR420
description: Arabidopsis thaliana miR420 stem-loop
organism: ath
sequence:
UUCUAAACUAAUCACGGAAAUGCAAAAAUUGGAUACUACACUAUCAACUUUUUUCUUUUGUUCUCUUUAUCUCGUGAAUUUCCAUUUAAUGAGUUUAGUU


mirna_acc: MI0001433
mirna_id: osa-MIR413
description: Oryza sativa miR413 stem-loop
organism: osa
sequence:
ACGGCUAGUUUCACUUGUUCUGCACAUGUGGAAAACAGUUAGCACUCUAUCUGAGUCGUAAUCCCAAGCAUUAUUACAGAAAAAUAAAAGUGCAUUACAAAGAAGUCAGACAU


mirna_acc: MI0001434
mirna_id: osa-MIR414
description: Oryza sativa miR414 stem-loop
organism: osa
sequence:
GUUGCCGCUGCCGUCAUCCUCAUCAUCAUCGUCCUUGCAUGAAACCGCCAGCAAAUCCUUGCGCGGGGGGAGGGGGAAGGGGAGGGGGAGGGGUCGGAGGGGCGGC


mirna_acc: MI0001435
mirna_id: osa-MIR415
description: Oryza sativa miR415 stem-loop
organism: osa
sequence:
AGAGAGUUUUACAGAGCAGAAACAGAACAGAAGCAGAGCAGCUGUGUAUACACAACACUGCAACUAUCCCUAUCACUGAGGGACAAAGCAGAAACCAGCUGAGCUCUCCUUGGCUGUCUGUACAAGCAAAGCAAAAGCUUCAAG


mirna_acc: MI0001436
mirna_id: osa-MIR416
description: Oryza sativa miR416 stem-loop
organism: osa
sequence:
GAUGAGGAGUAUGAAUAGAAAGAAUUAGAAAAGCUACGGUGGUUGUUGAGCAGCGCCAAAAAAAACUCUGCUUUGCUCUGUUUCUGUGUUCGUCCGUACACUGUUCAUC


mirna_acc: MI0001439
mirna_id: osa-MIR419
description: Oryza sativa miR419 stem-loop
organism: osa
sequence:
UCUUCUCUGUUCUCUGUGAUGAAUGCUGACGAUGUUGUAGAUGUGAACUUUUUUUUUCUCUGUUGUCUAUGAUGAAUGCUUGUUGUCCUGGAGAUAUUGUAGA


mirna_acc: MI0001441
mirna_id: ath-MIR426
description: Arabidopsis thaliana miR426 stem-loop
organism: ath
sequence:
GAGGGGGGACAAUUUUUGGAAAUUUGUCCUUACGGGUAGUACUAGAAUACUUGUCCACAUGACGAUUUGAAAUAACCGAAGGACAUAUGAGGAAAAAAUAAAAUUAAACUC

comment:
miR426 was predicted and validated using procedures described in [1], but the sequence itself was not reported (Takashi Soyano, pers. comm.). The status of this sequence as a miRNA has been questioned on the basis of lack of conservation in genomes other than Arabidopsis and rice, moderately poor precursor hairpin structure, lack of identified targets, and low Northern blot signal [2].  This sequence may therefore be removed in subsequent data releases. 


mirna_acc: MI0001442
mirna_id: osa-MIR426
description: Oryza sativa miR426 stem-loop
organism: osa
sequence:
UCGCAUUUUUGGAAGUUUGUCCUUACGAAAAGGCUAGCAAAAUUUAGUGAGGCAAUGAAUGAAAAGACAUCUAGCGAUACUAAAAUUAAAAUUUGAUAACCCUAAAAUGUGUCAAACUUUGGCAUUUCGUGAAAAUCCUUCAAUGCGA


mirna_acc: MI0001445
mirna_id: hsa-mir-423
description: Homo sapiens miR-423 stem-loop
sequence: AUAAAGGAAGUUAGGCUGAGGGGCAGAGAGCGAGACUUUUCUAUUUUCCAAAAGCUCGGUCUGAGGCCCCUCAGUCUUGCUUCCUAACCCGCGC
organism: hsa
comment:
miR-423 (renamed miR-423-3p here) is expressed in human promyelocytic leukemia (HL-60) cells [1].  The level of expression was shown to be up-regulated 48 hours after TPA-induction.  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [2]. 


mirna_acc: MI0001446
mirna_id: hsa-mir-424
description: Homo sapiens miR-424 stem-loop
sequence: CGAGGGGAUACAGCAGCAAUUCAUGUUUUGAAGUGUUCUAAAUGGUUCAAAACGUGAGGCGCUGCUAUACCCCCUCGUGGGGAAGGUAGAAGGUGGGG
organism: hsa
comment:
This hairpin precursor expresses a 5' arm product, named miR-424, in human promyelocytic leukemia (HL-60) cells [1].  The level of expression of miR-424 was shown to be up-regulated 48 hours after TPA-induction.  The sequence is orthologous to the experimentally verified rat miR-322 locus (MIR:MI0000589), which expresses its mature product from the 3' arm of the hairpin.  The human miR-424 hairpin does not appear to contain the miR-322 sequence. 


mirna_acc: MI0001448
mirna_id: hsa-mir-425
description: Homo sapiens miR-425 stem-loop
sequence: GAAAGCGCUUUGGAAUGACACGAUCACUCCCGUUGAGUGGGCACCCGAGAAGCCAUCGGGAAUGUCGUGUCCGCCCAGUGCUCUUUC
organism: hsa
comment:
The mature sequences were previously named miR-425-5p and miR-425-3p in [2] and here.  Landgraf et al. show that the 5' product is the predominant one [3].  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [3]. 


mirna_acc: MI0001456
mirna_id: zma-MIR156d
description: Zea mays miR156d stem-loop
organism: zma
sequence:
AGGCUCUCGAGAGAUUGACAGAAGAGAGUGAGCACACGGCGCGACGAACGACAUAGCAUGUAUGCCGUCCUCGCCGCGUGCUCACUUCUCUUUCUGUCAGCCUCUUUCUCUCGAUGGCU


mirna_acc: MI0001457
mirna_id: zma-MIR156f
description: Zea mays miR156f stem-loop
organism: zma
sequence:
UGGCUGCUAGAUGGUGUGGCUGACAGAAGAGAGUGAGCACGCAUCGGCCAGACUGCAUCUAUAUACGGCUGCCCCAAAGCGACGGAUCGAUGGAUGCCUAGCCUAGGCCUAGGCGCAGCUGCUGUUGCGUGCUCACUUCUCUUUCUGUCAGCUCUCUCUCUCAUCCU


mirna_acc: MI0001458
mirna_id: zma-MIR156g
description: Zea mays miR156g stem-loop
organism: zma
sequence:
GGCUGACAGAAGAGAGUGAGCACGCAUCGGCCAGACUGCAUCUAUAUACGGCUGCUCCUGGCGAAUGGAUAGAUGCCAAGGCGCAGCUGCUGUUGCGUGCUCACUUCUCUUUCUGUCAGCU


mirna_acc: MI0001459
mirna_id: zma-MIR156b
description: Zea mays miR156b stem-loop
organism: zma
sequence:
AGAUGAGUUUUUUGAAGGUUUGACAGAAGAGAGUGAGCACACACGGUGGUUUCUUACCAUGAGUGUCAUGCUAGGAGCUGUGCGUGCUCACCCUCUAUCUGUCAGUCACUCAUCAAGCCCAUCU


mirna_acc: MI0001460
mirna_id: zma-MIR156c
description: Zea mays miR156c stem-loop
organism: zma
sequence:
GGUGGAGGAGAGGUGAAAGCUGACAGAAGAGAGUGAGCACACAUGGUGCCUUUCUUGCAUGAUGUAUGAUCGAGAGAGUUCAUGCUCGAAGCUAUGCGUGCUCACUUCUCUCUUUGUCAGCCAUUAGAACUCCUCUAUC


mirna_acc: MI0001461
mirna_id: zma-MIR156e
description: Zea mays miR156e stem-loop
organism: zma
sequence:
CCGGCGGGCGCGCGCGCGGUGACAGAAGAGAGUGAGCACACGGCCGGUGUGACGGCACCGGCGCGGAUGUGCCGUCGCGGCCGCGUGCUCACUGCUCUCUCUGUCAUCCGCUGGCACACCCUCACG


mirna_acc: MI0001462
mirna_id: zma-MIR156a
description: Zea mays miR156a stem-loop
organism: zma
sequence:
UUCGUUCCGUGGCUAACUGACAGAAGAGAGUGAGCACACAGCGGGCAGACUGCAUCGAUCGAUCUGCAUCCGAGACGGCGCACGUACGAAUGAUGAUGCAGCUGCUGCUGCGUGCUCACUUCUCUCUCUGUCAGUCCUCUAGCUGCUACGGC


mirna_acc: MI0001463
mirna_id: zma-MIR156h
description: Zea mays miR156h stem-loop
organism: zma
sequence:
CGGGCUCGCGCGCGCGCGGUGACAGAAGAGAGUGAGCACACGGCCGGGCGUGACGGCACGUGCCGUCGCGGCCGCGUGCUCACUGCUCUUUCUGUCAUCCGCUGGUCCGGGCCUC


mirna_acc: MI0001464
mirna_id: zma-MIR156i
description: Zea mays miR156i stem-loop
organism: zma
sequence:
CGCGGCGGGCGGUGACAGAAGAGAGUGAGCACACGGCCGGGCGGAACGGCACCGGCGGAUGGUGCCGUCGCGGACGCGUGCUCACUGCUCUAUCUGUCAUCCACUCUCUCCCCCGCU


mirna_acc: MI0001465
mirna_id: zma-MIR160a
description: Zea mays miR160a stem-loop
organism: zma
sequence:
UUGUGUGCGUGCCUGGCUCCCUGUAUGCCACACAUGUAGCGCCCAACCCAGAUGYUAAGGUUGCCUGCUGUGGGUGGCGUGCAAGGGGCCAAGCAUGCAUCCAU


mirna_acc: MI0001466
mirna_id: zma-MIR160c
description: Zea mays miR160c stem-loop
organism: zma
sequence:
AGGAUGUGCCUGGCUCCCUGUAUGCCACUCAUCUAGAGCAACGACAGCUUGGUAGGGUUGCCUAUAAGAUGGAUGGCGUGCAUGGUGCCAAGCAUAUCUC


mirna_acc: MI0001467
mirna_id: zma-MIR160d
description: Zea mays miR160d stem-loop
organism: zma
sequence:
GGCCAGGGGCGGGAUCGAUAUGCCUGGCUCCCUGUAUGCCACUCGCAUGGCUGCCAACUCAUCAUGCAUACACUGCUAGCUAGUCGUUGGCUCCACUGCGGAUGGCGUGCGUGGAGCCAAGCAUGACCGAUCAUCUCCUCCU


mirna_acc: MI0001468
mirna_id: zma-MIR160b
description: Zea mays miR160b stem-loop
organism: zma
sequence:
CGAUCGGCUCGUGUCGUGUGUGCCUGGCUCCCUGUAUGCCACACAUGUAGCCAACCCGUGGCGUGAUUGGAUGCUGUGGGUGGCGUGCAAGGAGCCAAGCAUGCAUAACAGGCCAUGAUCA


mirna_acc: MI0001469
mirna_id: zma-MIR164a
description: Zea mays miR164a stem-loop
organism: zma
sequence:
CAGUGACAAGGACCACGCUGGAGAAGCAGGGCACGUGCAUGCGCAUACCAUAUAGCUAGACGAUGUUCUCUCUCGCUCCGCUCGACCAAGCUUCAUGUAUGGAUGGGUACGCACGCACGUGUUCUCCUUCUCCAUCGAGGUCUUUCUCACUU


mirna_acc: MI0001470
mirna_id: zma-MIR164d
description: Zea mays miR164d stem-loop
organism: zma
sequence:


mirna_acc: MI0001471
mirna_id: zma-MIR164b
description: Zea mays miR164b stem-loop
organism: zma
sequence:
UAGACGGUGGCUGUGCGUGGUGGAGAAGCAGGGCACGUGCAUUACCAUCCAAUGCCGCCGGGUGGGUGGGUGGAAUGGAUGGAUGGUUCUUGAUGUGCCCAUCUUCUCCACCGAGCACGAACUGUCUU


mirna_acc: MI0001472
mirna_id: zma-MIR164c
description: Zea mays miR164c stem-loop
organism: zma
sequence:


mirna_acc: MI0001473
mirna_id: zma-MIR169a
description: Zea mays miR169a stem-loop
organism: zma
sequence:
UAGGCUCGGGGACUAUGGUGCAGCCAAGGAUGACUUGCCGAUCGAUGUGACGCCUCUUGAUCUCGUCGUCGUCAGAUCGUCGCCGAUCAUCGGCAAGUUGUUCUUGGCUACACCGUGGCUCCUGCUCCUG


mirna_acc: MI0001474
mirna_id: zma-MIR169b
description: Zea mays miR169b stem-loop
organism: zma
sequence:
UAGGCUCGGGGACUACGGUGCAGCCAAGGAUGACUUGCCGAUCUAUCGUCGAUCAACGAGCGACGCCUCUGAUGUCUGAUCUCGACAUCUAUCGUCGUCAGACCAUCAUCAUCUAUCGGCAAGUUGUUCUUGGCUACACCGUGGCUCCUGCUCCUG


mirna_acc: MI0001475
mirna_id: zma-MIR167a
description: Zea mays miR167a stem-loop
organism: zma
sequence:
UGCUCUUGCGAAUGAGUGAAGCUGCCAGCAUGAUCUAGCUCUGAUUUGGUUGGCACCAUAUUAGCAGGCGUCCACGCACAGCUAGACUAGAGUGGCCUCGCGCGCUCUCGUCUGGUCUGUGUCUCGCUUUGUGCCUGCAAAUCGUUGUUAGAUCAUGCAUGACAGCCUCAUUCCUUCACAAUUCUGGGGC


mirna_acc: MI0001476
mirna_id: zma-MIR167b
description: Zea mays miR167b stem-loop
organism: zma
sequence:
AGUGCCCAAGAUAAAGGGUGAAGCUGCCAGCAUGAUCUAACGACGGCAUUGCUCUGCUGCUGCAGUGAGGCUUGCGAGUGAUGGUUAGAUCAUGCUGUGACAGUUUCACUCUUUCCCUUUGGGCACA


mirna_acc: MI0001477
mirna_id: zma-MIR167d
description: Zea mays miR167d stem-loop
organism: zma
sequence:
UGCCCAAGGGAACGAGUGAAGCUGCCAGCAUGAUCUAGCUCUGAGUGAUCACCCGAAAAAGAACAAUAGUUCUAGGUGGUCAUGCCUUGCUAGGUCAUGCUGCUGCAGCCUCACUUCUUCCCGUCGUUGGGCA


mirna_acc: MI0001478
mirna_id: zma-MIR167c
description: Zea mays miR167c stem-loop
organism: zma
sequence:
UGCCCAAGGGAACGAGUGAAGCUGCCAGCAUGAUCUAGCUCGGAGUGAUCACGCGAGGAGAACAAUAGCUCGAGGUGGUCAUGCCUUGCUAGAUCAUGCUGUGGCAGCCUCACUUCUUCCCGUCCUUGGGCA


mirna_acc: MI0001480
mirna_id: zma-MIR166a
description: Zea mays miR166a stem-loop
organism: zma
sequence:


mirna_acc: MI0001481
mirna_id: zma-MIR162
description: Zea mays miR162 stem-loop
organism: zma
sequence:
CUGGGCGCAGUGGUUUAUCGAUCUCUUCCUUGCCUUGUGCUGGUCCGGCCGGGAGUGGUGGUUCAAGCGUUUUAUUGUUGCAGCAGCUCGCAAACAACGCGGGAAUCGGUCGAUAAACCUCUGCAUCCAG


mirna_acc: MI0001487
mirna_id: zma-MIR166g
description: Zea mays miR166g stem-loop
organism: zma
sequence:
GGGGAAUGUUGUCUGGUUGGAGACCUAACACCRCGAAUUAAUCAUCCAUGCCAUGGAAGCAGCAUAUGCCCGCCUGCAUCUAUCCAUGCAUGAUGGUGGAAGGUUUCGGACCAGGCUUCAUUCCCC


mirna_acc: MI0001488
mirna_id: zma-MIR166b
description: Zea mays miR166b stem-loop
organism: zma
sequence:
GUGGAAUGUUGUCUGGUUCAAGGUCUUGCUWUCCGAUUUGAGGAUGAUCCAUGCUUGCAUGUGUAGUUUUUUUUGUUCCUCAGAUCUACAAGAUCUCGGACCAGGCUUCAUUCCCC


mirna_acc: MI0001490
mirna_id: zma-MIR166d
description: Zea mays miR166d stem-loop
organism: zma
sequence:
GUGGAAUGUUGUCUGGUUCAAGGUCUUUUGCUUUGUGAUCCAUCUGUGUAGAGCUUCUAAGUAUUCCUUGGAUCUGCAAGAUCUCGGACCAGGCUUCAUUCCCC


mirna_acc: MI0001495
mirna_id: zma-MIR172b
description: Zea mays miR172b stem-loop
organism: zma
sequence:
GUGCAGCACCAUCAAGAUUCACAUCGUCCAACUCAUGCAUCAUGCAUAUAUGCAUCUUCAAUGAUGCGUGCCUCGCAUGUGUGUGUAUAUAUAUAUGAUGAGAUGAGAAUCUUGAUGAUGCUGCAU


mirna_acc: MI0001496
mirna_id: zma-MIR172c
description: Zea mays miR172c stem-loop
organism: zma
sequence:
GUGCAGCACCACCAAGAUUCACAUCCAACUCUCACGCAUCUUCAGUGAUGCAUGCAUGCUCUGUGAUGUCUCGCAGCAGCUAUAUGCAUAUGUGAUGAGAUGAGAAUCUUGAUGAUGCUGCAU


mirna_acc: MI0001500
mirna_id: sbi-MIR166a
description: Sorghum bicolor miR166a stem-loop
organism: sbi
sequence:
GUGGAAUGUUGUCUGGUUCAAGGUCUCGCUUGUGAUUUAAGGAUGAUUUGUGCAUGCGUAAUUUUUAUUCCUUGAAUCUAUGAGAUCUCGGACCAGGCUUCAUUCCCC


mirna_acc: MI0001501
mirna_id: sbi-MIR172b
description: Sorghum bicolor miR172b stem-loop
organism: sbi
sequence:
GCGUGGCAUCAUCAAGAUUCACACACUGCUUGCAAAUGCAUACAUGCAUCUCUGCCGCCUUCUUUGCCUGCCAUUAAUAGCAGUUUUACUACAUGUUUUAGCUGCUGCUGCAUCAUAUAUGCCUCUGUGAAUAUAUAUGUGUAUGUGUGGGAAUCUUGAUGAUGCUGCAU


mirna_acc: MI0001502
mirna_id: sbi-MIR172c
description: Sorghum bicolor miR172c stem-loop
organism: sbi
sequence:
GUGCAGCACCAUCAAGAUUCACAUGGUCCAACUCAUGCAUCUUCAGUGAUGCUCAUGUGAUGGCUCGCAGUUGCUAUAUAUGCAUAUGUGAUGAGAUGAGAAUCUUGAUGAUGCUGCAU


mirna_acc: MI0001503
mirna_id: sbi-MIR172a
description: Sorghum bicolor miR172a stem-loop
organism: sbi
sequence:
GUGCAGCAUCAUCAAGAUUCACAUCCAGCUCAUCCUCGGUGAUAUGCUAUAUACAUAAAUAUAUGCGUAUGUGAUGAGAUGAGAAUCUUGAUGAUGCUGCAU


mirna_acc: MI0001507
mirna_id: sbi-MIR160d
description: Sorghum bicolor miR160d stem-loop
organism: sbi
sequence:
UGCCUGGCUCCCUGUAUGCCACUCGCUUAGCUGCCAACAACUCAUACUACGUUGUUAACGACGUUGGCUCUACUGCGGAUGGCGUGCGAGGAGCCAAGCA


mirna_acc: MI0001512
mirna_id: sbi-MIR164a
previous_mirna_id: sbi-MIR164
description: Sorghum bicolor miR164 stem-loop
organism: sbi
sequence:
UGGAGAAGCAGGGCACGUGCAUUACCAUCCAAUGCCGCCAAGCUCGAUCCUCCUCUGAGCUUGCUAGCUCCAUCAGCUCGCCAGCCAUGGCUGGAUGGAUGGUUCUUCAUGUGCCCAUCUUCUCCA


mirna_acc: MI0001514
mirna_id: sbi-MIR167b
description: Sorghum bicolor miR167b stem-loop
organism: sbi
sequence:
UGAAGCUGCCAGCAUGAUCUAACAACGGCAUUGCUCCUCCGUGUAGCGCCCUGUGCUUGCUUUUGCUUGUCUCCAUGGAGAAGACAGCGGCAAAGCUUAGCUUUGCUUCGCUUAGCUUGCUGGCUUUUCGUAUGGGCUGGCGGCGGGUUGCUGCGUGAAGCUUGCAAGUGAUGGUUAGAUCAUGCUGUGACAGUUUCA


mirna_acc: MI0001515
mirna_id: sbi-MIR169b
description: Sorghum bicolor miR169b stem-loop
organism: sbi
sequence:
CAGCCAAGGAUGACUUGCCGGAUAUGUGCAUGCAUAUGUUACAAGGCAGCAUAUGCACCCUGUUACAAGCCUGCCUGUUCUCCGGCAAGUUGUCCUUGGCUA


mirna_acc: MI0001521
mirna_id: oar-mir-127
description: Ovis aries miR-127 stem-loop
organism: oar
sequence:
GCUUUGAUCACUGUCUCCAGCCUGCUGAAGCUCAGAGGGCUCUGAUUCAGAAAGAUCAUCGGAUCCGUCUGAGCUUGGCUGGUCGGAAGUCUCCUCAUCUGCUUCCUUCGGGUU


mirna_acc: MI0001525
mirna_id: mmu-mir-433
description: Mus musculus miR-433 stem-loop
organism: mmu
sequence:
UGCCCGGGGAGAAGUACGGUGAGCCUGUCAUUAUUCAGAGAGGCUAGAUCCUCUGUGUUGAGAAGGAUCAUGAUGGGCUCCUCGGUGUUCUCCAGGUAGCGGCACCACACCAUGAAGGCAGCCC


mirna_acc: MI0001530
mirna_id: sbi-MIR393a
previous_mirna_id: sbi-MIR393
description: Sorghum bicolor miR393 stem-loop
organism: sbi
sequence:
ACAAUGCCUGGAGGAAGCAUCCAAAGGGAUCGCAUUGAUCCGUCACUCCUUCCAUUCUAUCAUGGGUGGUCGUCGUCUACAAGGACUUCGUUCCCGACGGAUCAUGCGAUCCUUUUGGAGGCUUCCUCUAGACAUUACU


mirna_acc: MI0001531
mirna_id: sbi-MIR394a
description: Sorghum bicolor miR394a stem-loop
organism: sbi
sequence:
CUUUACAUACUGAGAGUUCCUUGGCAUUCUGUCCACCUCCUUGCCCAUCGUCAGAUAUAUGUGUUGCUUUUGGAGGUGGACAUACUGCCAAUGGAGCUGUGUAGGCCUCU


mirna_acc: MI0001533
mirna_id: sbi-MIR395b
description: Sorghum bicolor miR395b stem-loop
organism: sbi
sequence:
GUUAGGUUUGGUGUCCCUAGGAGUUCUCUGCAAGCACUUCACGAGGCAUCGUUUUGAGAGCUUUUGUGAAGUGUUUGGGGGAACUCUUAGUGUCACAAAUCAUUU


mirna_acc: MI0001534
mirna_id: sbi-MIR395a
description: Sorghum bicolor miR395a stem-loop
organism: sbi
sequence:
GGUUGGUUGGUUGUCACCUGGAGUUCUCCACAAACUACUUCAGUAGCAACACACACCCCUAGUUUAAUGCACCGUGUUUGCAUGUUUGUGUGGAGCUGUGUGUGUACAUAGUGAAGUGUUUGGGGGAACUCUGGGUGGCAAUCAGCAAUU


mirna_acc: MI0001536
mirna_id: sbi-MIR395d
description: Sorghum bicolor miR395d stem-loop
organism: sbi
sequence:
UCAAGUUUGGUGUCCCCAGGAGUUCUCUGCAAACACUUCACAAAGCACUUUUUUAGAGCUUUUGUGAAGUGUUUGGGGGAACUCUUGGUGCCACUGAUCAUUU


mirna_acc: MI0001537
mirna_id: sbi-MIR395e
description: Sorghum bicolor miR395e stem-loop
organism: sbi
sequence:
AUUAGGUUUGGUGUCCCCGGGAGUUCUCUGCAAGCACUUCACGAGGCACUAUUUUGAGAGCUUUUGUGAAGUGUUUGGGGGAACUCUUGAUGCCACUAACCAUUU


mirna_acc: MI0001538
mirna_id: sbi-MIR396b
description: Sorghum bicolor miR396b stem-loop
organism: sbi
sequence:
AGAUGGCCUUCUUUGUGAUCUUCCACAGCUUUCUUGAACUGCAUCUCUAAGAGGAGCAGCUUGAACUCUCUACCUGCAUGAGCAGGUGCAGUUCAAUAAAGCUGUGGGAAACUGCAGAGAGAGGCCAA


mirna_acc: MI0001539
mirna_id: sbi-MIR396a
description: Sorghum bicolor miR396a stem-loop
organism: sbi
sequence:
ACAUGGCCCUCCUUGCCGUCUUCCACAGCUUUCUUGAACUGCAUGCUGGUAGUGCUGUGUGCAUCCGUUCCAAUAUUCCAAGAGGCAGUUCAAUAAAGCUGUGGGAAAUUGCAGAGAGAGACCAG


mirna_acc: MI0001540
mirna_id: sbi-MIR396c
description: Sorghum bicolor miR396c stem-loop
organism: sbi
sequence:
UUCAAGUCCAUGCCAUGCCUUUCCACAGCUUUCUUGAACUUCUCCUCCUCCUCCUCUCUCUUAGAAGGGUAGCUUUGAACAUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCUCCAAAGAAGGUCAAGAAAGCUGUGGGAAGAAAUGACAUAACAAGGA


mirna_acc: MI0001541
mirna_id: sbi-MIR399a
description: Sorghum bicolor miR399a stem-loop
organism: sbi
sequence:
UGCCGGCGCCGGCGAAUUACGGGGCAGUUCGUCUUUGGCACAAAGGCACGUCCAGAACUACUCGAUGAGGGUCACUUGAGCUGAACUGAACAUGCGUGCCAAAGGAGAAUUGCCCUGCGAUUCGCCCGUGCAGAAG


mirna_acc: MI0001542
mirna_id: sbi-MIR399c
description: Sorghum bicolor miR399c stem-loop
organism: sbi
sequence:
CAUAUGCUGAGCAUGAAUUACAGGGUACAUCUCCUUUGGCACAGAUGCAUGCAGCAGAAUGCAUAUAUGCAUAUGCGAAACUGUCGAGCGUGCCAAAGGAGAAUUGCCCUGCGAUUCUAGGCUCUGCAAU


mirna_acc: MI0001543
mirna_id: sbi-MIR399d
description: Sorghum bicolor miR399d stem-loop
organism: sbi
sequence:


mirna_acc: MI0001544
mirna_id: sbi-MIR399e
description: Sorghum bicolor miR399e stem-loop
organism: sbi
sequence:
ACAUGCGGGGCCAUGCAUUACCGGGUGGGUCUCCUCUGGCAGUAACUUGGCUGGUCGCCUGGUCCAUGAUACCUGCGUGCAGACACUGCCAAAGGAGAUUUGCCCAGCAAUGCAGUUUUGAGUCCC


mirna_acc: MI0001545
mirna_id: sbi-MIR399f
description: Sorghum bicolor miR399f stem-loop
organism: sbi
sequence:
CAUAUGCGAGUCGAGGAUUACCGGGCCAUUUCUCCUUGGGCAGAGUAAUUGAAUUUUACUUUGCUGGAUCCGGUUUGCUCUGCCAAAGGAGAUUUGCCCAGCAAUCCACAUUUGUAAUAU


mirna_acc: MI0001546
mirna_id: sbi-MIR399b
description: Sorghum bicolor miR399b stem-loop
organism: sbi
sequence:
UAGCUCAGGGUGAGAAUCACAGUGCAGCUCUCCUCUGGCAUGAAGGCUGAGAGAGUCAUGAGCAGUUUUCUGGCCUUUCCCUGCCAAAGGAGAGCUGCCCUGCCAUUCAUUAGCCCUGCAA


mirna_acc: MI0001547
mirna_id: sbi-MIR399g
description: Sorghum bicolor miR399g stem-loop
organism: sbi
sequence:
CCAGAUGUGCACUUGCAUUGCUGGGCAACUUCUCCUUUGGCAGAUGCGCAAUGUGCUCCGACCCUGGGGCUUCUUCCGCGCCUACUGCCAAAGGAAAUUUGCCCCGGAAUUCACCUGCACAGCCA


mirna_acc: MI0001548
mirna_id: sbi-MIR156d
description: Sorghum bicolor miR156d stem-loop
organism: sbi
sequence:
UGGACCUCUGGAGUGAGUGAUGACAGAAGAGAGAGAGCACAACCCAGCACCAGCGAGGAGAAGCCUCGCUUCUGCGAGGGCCGUGUGCUCUCUGCUCUCACUGUCAUCGCCGACAGGCCACCCAA


mirna_acc: MI0001549
mirna_id: sbi-MIR164b
description: Sorghum bicolor miR164b stem-loop
organism: sbi
sequence:
GAGGGGCGAGCAAACCGUGCUGGAGAAGCAGGGCACGUGCUCGUCGUCGCUGCAUGCGUGGUCGUCGUCGCAGCACGUGCGCUCCUUCUCCAACAUGGCUUCUCGCCCCCA


mirna_acc: MI0001550
mirna_id: sbi-MIR166e
description: Sorghum bicolor miR166e stem-loop
organism: sbi
sequence:
CAAGUUGAAGGUUAGGUUAAUGGGGUUGUUGUCUGGUUCAAGGUCGCCACAGCAGACAAAGCCCAUUUUGCUUAGCAUGCAGCAUGGGUUUAUCUCUAUUGAUGAUCGAUCUCGGACCAGGCUUCAAUCCCUUUAACUAGCAUCUGCAUAU


mirna_acc: MI0001551
mirna_id: sbi-MIR167d
description: Sorghum bicolor miR167d stem-loop
organism: sbi
sequence:
GUGGUGCAUCCUCUAGUAGCUGAAGCUGCCAGCAUGAUCUGAUGAGGUGAGGUUUAUUUGCUAGUUGGUCACAGGCUAACAGCAUGAUGGCCCAACAAAUCAACGAUCAGAUCAUGCUGUGCAGUUUCAUCUGCUCGUGGAUGCACAU


mirna_acc: MI0001552
mirna_id: sbi-MIR167f
description: Sorghum bicolor miR167f stem-loop
organism: sbi
sequence:
UCCGGUGCACUAGAGGUGGAUGAAGCUGCCAGCAUGAUCUGAGAAACUAGUGCUUGAUCCUUUUACUGAUUUCCAUCUAGCCUGCAUCUAUAUAUAUACCUUGAUGCAUGAAUCAUGGUCUGAUGAUAGUUAAGCGAGAUCAGAUCGUCUGGCAGUUUCAUCUUCUUAUGGCAGCACAA


mirna_acc: MI0001553
mirna_id: sbi-MIR167g
description: Sorghum bicolor miR167g stem-loop
organism: sbi
sequence:
AUUUGUGCACCUUAAGCAGCUGAAGCUGCCAGCAUGAUCUGAUCUUAAUUUCUUUUACUGGCAAACUUCGGAUGCCUAAGAUCAGAUCGUGCUGCGCAGUUUCACCUGCUAAUUGGAGCACAG


mirna_acc: MI0001554
mirna_id: sbi-MIR167e
description: Sorghum bicolor miR167e stem-loop
organism: sbi
sequence:
AGUGGUGCACCACAAGUUGGUGAAGCUGCCAGCAUGAUCUGAUGUCUUUAUAUAUAUUAAUUACCUCUGAUUUCUCCCUGACUGUUAUGGAUCGAUGAAUUCAGAUAUGAGGGGAAGGAAGAAAGAGGAAUAAUGAGCAUCAGGUCAUGCUGUAGUUUCAUCCGCUGGUGGGAGCACAU


mirna_acc: MI0001555
mirna_id: sbi-MIR167c
description: Sorghum bicolor miR167c stem-loop
organism: sbi
sequence:
CUUUGCUGGUGUGAGAGGUUGAAGCUGCCAGCAUGAUCUGGUGGCCGGCCGGCCGGCGUCUCUCAAGUGCGCUCGGAUCGGAGACGCGUCGCCAGAUCAUGUUGCAGCUUCACUCUCUCGCAACCACCAAA


mirna_acc: MI0001556
mirna_id: sbi-MIR168
description: Sorghum bicolor miR168 stem-loop
organism: sbi
sequence:
GCCGCCGCGCCGCCUCGGGCUCGCUUGGUGCAGAUCGGGACCUGCCGCCGUGCUCGGACGGGACAGAUCCCGCCUUGCACCAAGUGAAUCCGAGCCGGAGCAGCCG


mirna_acc: MI0001557
mirna_id: sbi-MIR169c
description: Sorghum bicolor miR169c stem-loop
organism: sbi
sequence:
UGGCGAGAGCCUGCCUUUGGUAGCCAAGGAUGACUUGCCUACACGGCCUUGCGAGUUCCGGUUGCAUGGCCAGUUCAGUUGGGUUUGUGGGCGGUCACCUUGGCUAGCCUGAGUGGCUCUUGCCUG


mirna_acc: MI0001558
mirna_id: sbi-MIR169d
description: Sorghum bicolor miR169d stem-loop
organism: sbi
sequence:
UGGCGAGAGCCUGCCUUUGGUAGCCAAGGAUGACUUGCCUACAUGGCAUUGCGAGUUCCGGUUGCAUGGCCAGUUCAGCUGAGUUUGUGGGCGGUCACCUUGG


mirna_acc: MI0001560
mirna_id: sbi-MIR169f
description: Sorghum bicolor miR169f stem-loop
organism: sbi
sequence:
CGAUGAGAGCACUGCUCUGGUAGCCAAGGAUGACUUGCCUGUGGCCUCCACUCCACCUGCGGCAGGAGGCUCUUCUUCUGCGCGCGCGUGUGUGUGUGGUUGUCGAUCGCAGGCAGUCUCCUUGGCUAGCCUCAGCGGCUCUCAUCCU


mirna_acc: MI0001561
mirna_id: sbi-MIR169g
description: Sorghum bicolor miR169g stem-loop
organism: sbi
sequence:
GCGAUAAGAGUCUGCCCAGAUAGCCAAGGAUGACUUGCCUGUGGCCUCUUGGCUUGGCUUGAGAGCUUAUUAACUCUGUGCACGUUUAAUUUGCUCUUCUUGUGGCCUCGAUCACAGGCAGUCUCCUUGGCUAGUCCGGGCGGCUCUUAUCU


mirna_acc: MI0001563
mirna_id: sbi-MIR169i
description: Sorghum bicolor miR169i stem-loop
organism: sbi
sequence:
GAUGGAGAGCCCCCUUUUGCUAGCCAAGAAUGACUUGCCUAUGCAUGCCCUCUGUUGGCAAUUCCUCCAGCCAUGGAGAUUGCACAAGGUGAAUUUUUGCGGCAUAGAUGAUGGAUGCAAUGUGGCUGCAUGGGCAGGUCUUCUUGGCUAGCCAGAGUGCUCUCAUCCA


mirna_acc: MI0001564
mirna_id: sbi-MIR171b
description: Sorghum bicolor miR171b stem-loop
organism: sbi
sequence:
AUGGCCGCCGCGCGCGACGGGGUAUUGGCGCGGUUCAAUUCGAGAGCUCGAGCCCUAGACUAGACGCCAGGGAGAGAGGGGGCUCUGCUCUCUGAUUGAGCCGUGCCAAUAUCACGUCCCGCUUGAAUGGCU


mirna_acc: MI0001565
mirna_id: sbi-MIR171d
description: Sorghum bicolor miR171d stem-loop
organism: sbi
sequence:
AUAAUGGAAUAGUAGCUAUGAUGUUGGCUCGGCUCACUCAGACCACCUCUCCGAUCCUCAGCUCGUGUCCAUUGCGACAUCGAUCAUGUAUAUAUGUCGCUGGUCGUGGUUUCUGAUUGAGCCGUGCCAAUAUCUCAGUACUCUUCCAUAUAU


mirna_acc: MI0001566
mirna_id: sbi-MIR171a
description: Sorghum bicolor miR171a stem-loop
organism: sbi
sequence:
UUGGUUGGCUGAGAGAGUGCGAUGUUGGCAUGGUUCAAUCAAAUCAUCGCCCGGCAAGGUGACUUAAAUUUUGCGCUUUCGAUCGAUCGAGGUGCAGGGAGGUGUUUCCAGGCACCGUGUUUGAUUGAGCCGUGCCAAUAUCACAACCUUCUCUAGCCUAU


mirna_acc: MI0001567
mirna_id: sbi-MIR171c
description: Sorghum bicolor miR171c stem-loop
organism: sbi
sequence:
AGAACGAGACGACAUGGCAUGGUAUUGACUUGGCUCAUCUCUCAUCCACAGCAAACUUCACAAGUGCCUGAGGUGAGCCGAGCCAAUAUCACUUCAUGUCAUCUAGCGU


mirna_acc: MI0001568
mirna_id: sbi-MIR172e
description: Sorghum bicolor miR172e stem-loop
organism: sbi
sequence:
UCGGAGCCGACUCUCUGCAGGUGCAGCAGCAUCAAGGUUCGCCAGCAGCAAGCGAUCGAUCGAGGCGUGUGUGUGUGAAUCUUGAUGAUGCUGCACCAGCAAUGAGCCGGCCGGC


mirna_acc: MI0001569
mirna_id: sbi-MIR166f
description: Sorghum bicolor miR166f stem-loop
organism: sbi
sequence:
CCUUGGUCAUGGGGGUUUGUGGGGAAUGUUGGCUGGCUCGAGGCAUCCGCGUCCUGGCUUGCAGAUCGUUUUGCCUGCUACCGGAAAGAUCGAGAGGCGUCGGACCAGGCUUCAUUCCUCGCAAACCGGUGCAUCCAUG


mirna_acc: MI0001570
mirna_id: sbi-MIR171e
description: Sorghum bicolor miR171e stem-loop
organism: sbi
sequence:
AGGAGGAAGAAGACGACAUGGCGUGGUAUUGUUUCGGCUCAUGUCCUUCUUGCUUCGAGUCUGUCGUCGGAUUUUGGAUGUGAUGUGAGCCGAACCAAUAUCACUCAUGUAUUCUUCAUUCUGA


mirna_acc: MI0001572
mirna_id: sbi-MIR159a
previous_mirna_id: sbi-MIR159
description: Sorghum bicolor miR159 stem-loop
organism: sbi
sequence:


mirna_acc: MI0001573
mirna_id: sbi-MIR319a
previous_mirna_id: sbi-MIR319
description: Sorghum bicolor miR319 stem-loop
organism: sbi
sequence:


mirna_acc: MI0001578
mirna_id: ame-mir-125
description: Apis mellifera miR-125 stem-loop
organism: ame
sequence:
GUAAAGCCUGCCGCGUCGCCGGUCCCCUGAGACCCUAACUUGUGACGUCGCGACCGAUAUCUCACAGGCUAGAUUCUCUGGUAUUGGCGAUGAGUGCUGCCUUUUGC


mirna_acc: MI0001582
mirna_id: ame-mir-219
description: Apis mellifera miR-219 stem-loop
organism: ame
sequence:
AAUUGAAUGUCUCAGGCAAUGAUUGUCCAAACGCAAUUCUUGUCUAAACGGUACGAAAUCAAGAAUUGUGUGGGGACAUCAGCGCUCGAGGUGCGAUUCAAC


mirna_acc: MI0001587
mirna_id: ame-mir-281
description: Apis mellifera miR-281 stem-loop
organism: ame
sequence:
CGACGAAAGGCGCGCGCUAUAAAGAGAGCUAUCCAUCGACAGUAUGGUUAUAAUAGACACUGUCAUGGAGUUGCUCUCUUUGUAGACACUGCUAUGUUCAACG


mirna_acc: MI0001599
mirna_id: aga-bantam
description: Anopheles gambiae bantam stem-loop
organism: aga
sequence:
UGUGUGGAUGAAAUGUAAUCACAGAACCGGUUUUCAUUUUCGAUCUGACUUAUUUUUUUCACAAACAAGUGAGAUCACUUUGAAAGCUGAUUUUGUACAAUUAAUUCAACG


mirna_acc: MI0001602
mirna_id: aga-mir-10
description: Anopheles gambiae miR-10 stem-loop
organism: aga
sequence:
GUCGAUUUAUGUUCUACAUCCACCCUGUAGAUCCGAAUUUGUUUGAAUUUAUAUUAAUAACAAAUUCGGUUCUAGAGAGGUUUGUGUGGGGCAUUUGUUAAC


mirna_acc: MI0001605
mirna_id: aga-mir-125
description: Anopheles gambiae miR-125 stem-loop
organism: aga
sequence:
UAUUGUUUCGUUUUUUUGUAUCUGCUGAUUCCCUGAGACCCUAACUUGUGACUAUCGUUGCAAAGUUUCACAAGUUUUGAUCUCCGGUAUUAGCGGUUGAGAUGCAACGGUA


mirna_acc: MI0001614
mirna_id: aga-mir-276
description: Anopheles gambiae miR-276 stem-loop
sequence: GGUGACUGCCAUCAGCGAGGUAUAGAGUUCCUACGGUAAUCGAUUGAAACUUUGUAGGAACUUCAUACCGUGCUCUUGGAUAGCCGUUUACC
organism: aga
comment:
miR-276-5p and miR-276-3p were cloned in Anopheles stephensi and mappedt to the A. gambiae genome [1]. 


mirna_acc: MI0001618
mirna_id: aga-mir-281
description: Anopheles gambiae miR-281 stem-loop
organism: aga
sequence:
GCAAUCGAAUAUGAAAAUAAAGAGAGCUAUCCGUCGACAGUAGGGAUAUAAUUCACUGUCAUGGAAUUGCUCUCUUUAUGUACAAUUCGAUAUUCAACGUGC


mirna_acc: MI0001625
mirna_id: aga-mir-308
description: Anopheles gambiae miR-308 stem-loop
organism: aga
sequence:
GCUUCUCGUGCGAUGUUUCGCAGUAUAUCCCUGUGAGUUUGCUACUUUUCAAUGGUCAAAUCACAGGAGUAUACUGUGAGAUGUUGCCGGUUACUUAGGC


mirna_acc: MI0001637
mirna_id: hsa-mir-448
description: Homo sapiens miR-448 stem-loop
organism: hsa
sequence:
GCCGGGAGGUUGAACAUCCUGCAUAGUGCUGCCAGGAAAUCCCUAUUUCAUAUAAGAGGGGGCUGGCUGGUUGCAUAUGUAGGAUGUCCCAUCUCCCAGCCCACUUCGUCA

comment:
Xie et al. [1] refer to this sequence by the internal identifier MIR64. The sequence is unrelated to C. elegans mir-64 (MIR:MI0000035). 


mirna_acc: MI0001638
mirna_id: mmu-mir-448
description: Mus musculus miR-448 stem-loop
organism: mmu
sequence:
ACGAGGAGGUUGAACAUCCUGCAUAGUGCUGCCAGGAAAUCCCUACUUCAUACUAAGAGGGGGCUGGCUGGUUGCAUAUGUAGGAUGUCCCAUCUCCUGGCCCACUUCGUCA

comment:
Xie et al. [1] refer to this sequence by the internal identifier MIR64. The sequence is unrelated to C. elegans mir-64 (MIR:MI0000035). 


mirna_acc: MI0001639
mirna_id: rno-mir-448
description: Rattus norvegicus miR-448 stem-loop
organism: rno
sequence:
ACGGGGAGGUUGAACAUCCUGCAUAGUGCUGCCAGGAAAUCCCUACUUCAUACUAAGAGGGGGCUGGCUGGUUGCAUAUGUAGGAUGUCCCAUCUCCCGGCCCACUUCGUCA

comment:
Xie et al. [1] refer to this sequence by the internal identifier MIR64. The sequence is unrelated to C. elegans mir-64 (MIR:MI0000035). 


mirna_acc: MI0001640
mirna_id: cfa-mir-448
description: Canis familiaris miR-448 stem-loop
organism: cfa
sequence:
GCAGGGAGGUUGAACAUCCUGCAUAGUGCUGCCAGGAAAUCCCUAUUUUAUACUAAGGGGGCUGGCUGGUUGCAUAUGUAGGAUGUCCCAUCUCCCCGCCCACUUCAUCG


mirna_acc: MI0001641
mirna_id: hsa-mir-429
description: Homo sapiens miR-429 stem-loop
sequence: CGCCGGCCGAUGGGCGUCUUACCAGACAUGGUUAGACCUGGCCCUCUGUCUAAUACUGUCUGGUAAAACCGUCCAUCCGCUGC
organism: hsa
comment:
Xie et al. [1] refer to this sequence by the internal identifier MIR201. The sequence is unrelated to mouse mir-201 (MIR:MI0000244). 


mirna_acc: MI0001645
mirna_id: mmu-mir-365-2
description: Mus musculus miR-365-2 stem-loop
organism: mmu
sequence:
AGAGUGAUCAAGGACAGCAAGAAAAAUGAGGGACUUUCAGGGGCAGCUGUGUUUCCUGACUCAGUCAUAAUGCCCCUAAAAAUCCUUAUUGUUCUUGCAGUGUGCAUCGGAG

comment:
Xie et al. [1] refer to this sequence by the internal identifier MIR190. The sequence is unrelated to mammalian mir-190 (MIR:MI0000486). 


mirna_acc: MI0001648
mirna_id: hsa-mir-449a
previous_mirna_id: hsa-mir-449
description: Homo sapiens miR-449a stem-loop
sequence: CUGUGUGUGAUGAGCUGGCAGUGUAUUGUUAGCUGGUUGAAUAUGUGAAUGGCAUCGGCUAACAUGCAACUGCUGUCUUAUUGCAUAUACA
organism: hsa
comment:
Xie et al. [1] refer to this sequence by the internal identifier MIR54. The sequence is unrelated to C. elegans mir-54 (MIR:MI0000025). 


mirna_acc: MI0001652
mirna_id: hsa-mir-450a-1
previous_mirna_id: hsa-mir-450;hsa-mir-450-1
description: Homo sapiens miR-450a-1 stem-loop
sequence: AAACGAUACUAAACUGUUUUUGCGAUGUGUUCCUAAUAUGCACUAUAAAUAUAUUGGGAACAUUUUGCAUGUAUAGUUUUGUAUCAAUAUA
organism: hsa
comment:
Xie et al. [1] refer to this sequence by the internal identifier MIR238. The sequence is unrelated to C. elegans mir-238 (MIR:MI0000313).  The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0001653
mirna_id: mmu-mir-450a-1
previous_mirna_id: mmu-mir-450;mmu-mir-450-1
description: Mus musculus miR-450a-1 stem-loop
sequence: GAGAGAUACUGAGCUGUUUUUGCGAUGUGUUCCUAAUAUGUGCUAUAAUUAUAUUGGGAACAUUUUGCAUAAAUAGCUUUGUGUCAAUACA
organism: mmu
comment:
Xie et al. [1] refer to this sequence by the internal identifier MIR238. The sequence is unrelated to C. elegans mir-238 (MIR:MI0000313). 


mirna_acc: MI0001686
mirna_id: hcmv-mir-US33
previous_mirna_id: hcv-miR-US33-1;hcmv-mir-US33-1
description: Human cytomegalovirus miR-US33 stem-loop
sequence: CACGGUUGAUUGUGCCCGGACCGUGGGCGCGACGAAACCCACCGUCACGGUCCGAGCACAUCCAAACGUG
organism: hcmv
comment:
The mature miRNA names reflect cloning frequencies from Landgraf et al. [2], and may differ subtly from previous annotations. 


mirna_acc: MI0001687
mirna_id: osa-MIR435
description: Oryza sativa miR435 stem-loop
organism: osa
sequence:
UUCCACCUUCCCAAAAACUCCCCAGCAGACCUGGAGCGAAAAUUGCCUUGAAUUAGCUUCAGACCUAUAGUGUCGUUGAUAGUUUAGGGACAUGUUUUAUCCGGUAUUGGAGUUGAGGGAUGAAAAUUGGAC


mirna_acc: MI0001688
mirna_id: osa-MIR437
description: Oryza sativa miR437 stem-loop
organism: osa
sequence:


mirna_acc: MI0001689
mirna_id: osa-MIR438
description: Oryza sativa miR438 stem-loop
organism: osa
sequence:
AACGUGUUUUGGGCAAACUUGUUUUCCCACGCGUUAUAGUGAAAACUUUUGGAAUAUGUUUGUUAUGGGAGUAUAUAUUAUUGAUAUUGGAUCUAGAAGCAUAAUUUUAUAUAACGUGUGUUACGGGUGGACAUGGUUUCAAAAGUUUUCACUUUAACGCGUGGGAUAUCAUCUACUUCCUCCGUU


mirna_acc: MI0001699
mirna_id: osa-MIR439i
description: Oryza sativa miR439i stem-loop
organism: osa
sequence:
CACCUACCCUGUCGAACUGACGCAGUUCGACAUGUACCUGUCGAACUGUGGUUGUUCGAUAGGUAUCCCUGUCGAACCGCGGUUGUUCGACAGGGUGCUAAAC


mirna_acc: MI0001700
mirna_id: osa-MIR439j
description: Oryza sativa miR439j stem-loop
organism: osa
sequence:
GCAGGGACAUAUCCAACGGGCAGUGUUCGAUAGGGGCGUGGCUACAGUGACACUACAAUGUUUUUUUCUAUUUUUAAAAUUAUUUAAUCACAUGUCGAACCGCGGUUGUUCGAUAGGUACCCUGU


mirna_acc: MI0001701
mirna_id: osa-MIR440
description: Oryza sativa miR440 stem-loop
organism: osa
sequence:
AUUGCUAUUGUUGGUGCUGGGCUCGUCCUGAUCACUAGGAGACUCUGAUCAAGCUAGGCCUAAACUUAUGUAUUAGUGUCUCCUGAUGAUCGGGACAAGGCUAACACCGAUGAGAGCGAU


mirna_acc: MI0001702
mirna_id: osa-MIR396d
description: Oryza sativa miR396d stem-loop
organism: osa
sequence:
AAAGAUGUGCGGGCAUGCUUUCCACAGGCUUUCUUGAACUGUGAACUCGUGGGGGUGUAUGUGCUCAUGUUGGGAUUGUGGUCGGUGGCCUCCAAUUCUCUGAAAAGAAAGCUGAAUUGUCGAGCUCCCCGUUCUGUCUUUG


mirna_acc: MI0001703
mirna_id: osa-MIR396e
description: Oryza sativa miR396e stem-loop
organism: osa
sequence:
GCGGGCAUGCUUUCCACAGGCUUUCUUGAACUGUGAACUCGUGGGGGUGUAUGUGCUCAUGUUGGGAUUGUGGUCGGUGGCCUCCAAUUCUCUGAAAAGAAAGCUGAAUUGUCGAGCUCCCCGUUCUGUCUUUGGUCGUCUCUACCUGUUGAUGGUUCAAGAAAGCCCAUGGAAACCAUGCCGC


mirna_acc: MI0001708
mirna_id: osa-MIR443
description: Oryza sativa miR443 stem-loop
organism: osa
sequence:
CGUCCCAUAAAAACAAACCCAAAACUAGAUGUGAUAUAUCACAAUACAAUAAAUCUGGAUAGGAGUCUAUCCAGAUACUUCUAUCUAGAUUUAUUGUACUGGGAUAUGUCACAUAUAUUCAGUUUUAUAUUUGUUUUUUUUUUGGACG


mirna_acc: MI0001719
mirna_id: osa-MIR444a
previous_mirna_id: osa-MIR444
description: Oryza sativa miR444a stem-loop
organism: osa
sequence:
AUGCAAUUGGGGGCAGCAAGCUAGAGGUGGCAACUGCAUAAUUUGCAAGAAAUUGUUGGCUGAAGAUCAUACCGAUGAUAUUCUUGCAAGUUAUGCAGUUGCUGCCUCAAGCUUGCUGCCUCCUGUUGCCA


mirna_acc: MI0001721
mirna_id: hsa-mir-431
description: Homo sapiens miR-431 stem-loop
organism: hsa
sequence:
UCCUGCUUGUCCUGCGAGGUGUCUUGCAGGCCGUCAUGCAGGCCACACUGACGGUAACGUUGCAGGUCGUCUUGCAGGGCUUCUCGCAAGACGACAUCCUCAUCACCAACGACG


mirna_acc: MI0001722
mirna_id: rno-mir-431
description: Rattus norvegicus miR-431 stem-loop
organism: rno
sequence:
UCCUGCGCGUCCUGCGAGGUGUCUUGCAGGCCGUCAUGCAGGCCACACUGACGGUAACGUUGCAGGUCGUCUUGCAGGGCUUCUCGCAAGACGACAUCUUCAUCGCCAACGACG


mirna_acc: MI0001733
mirna_id: hsa-mir-452
description: Homo sapiens miR-452 stem-loop
sequence: GCUAAGCACUUACAACUGUUUGCAGAGGAAACUGAGACUUUGUAACUAUGUCUCAGUCUCAUCUGCAAAGAAGUAAGUGCUUUGC
organism: hsa
comment:
The mature sequence shown here represents the most commonly cloned form from large-scale cloning studies [4].  The 5' end of the miRNA may be offset with respect to previous annotations. 


mirna_acc: MI0001738
mirna_id: mtr-MIR162
description: Medicago truncatula miR162 stem-loop
organism: mtr
sequence:
AGAUGAGGUGAAGUUCGUCACUGGAUGCAGCGGUUCAUCGAUCUGUUCCUGAAUUUUGUUUGUCUCGUAAAACAAACAUGAAUCGGUCGAUAAACCUCUGCAUCCAGCGCUCACUUUCCCCUCU


mirna_acc: MI0001739
mirna_id: mtr-MIR160a
previous_mirna_id: mtr-MIR160
description: Medicago truncatula miR160 stem-loop
organism: mtr
sequence:
AGAUAUAUAUACUAAUUGCGUGCCUGGCUCCCUGUAUGCCAUUUGUAGAGUUCAUCAAGAUGUUGAUGACUUUAAUGAAUGGCGUGCGAGGAGCCAUGCAUGUUGUGUAUAUUUUCUAU


mirna_acc: MI0001740
mirna_id: mtr-MIR166a
previous_mirna_id: mtr-MIR166
description: Medicago truncatula miR166 stem-loop
organism: mtr
sequence:
CAGACAUACGAAGGAGUUCAGGGGAAUGGUGUCUGAUUCGAGACCAUUCGUCACAAGUAAACAGUAGCCUUGAGAAUGAUCUCGGACCAGGCUUCAUUCCCCCUAGCUCAUAGUAUCAUGC


mirna_acc: MI0001741
mirna_id: mtr-MIR169a
description: Medicago truncatula miR169a stem-loop
organism: mtr
sequence:
AAGAGGCAGAGAGAGUAAUGCAGCCAAGGAUGACUUGCCGACAACAUUGGCGAAUGUUCAUGUGAUUUCUGCCUCAUUGUGCCGGCAAGUUGUCCUUGGCUAUGUUAGUCUCUCAUCUUCU


mirna_acc: MI0001742
mirna_id: mtr-MIR169b
description: Medicago truncatula miR169b stem-loop
organism: mtr
sequence:
AAGAGGCAGAGAGAGUAAUGCAGCCAAGGAUGACUUGCCGACAACGUUGGCGAAUGUUCAUGUGAUUUCUGCCUCAUUGUGCCGGCCAGUUGUCCUUGGCUAUGUUAGUCUCUCAUCUUCU


mirna_acc: MI0001743
mirna_id: mtr-MIR399b
description: Medicago truncatula miR399b stem-loop
organism: mtr
sequence:
UCAUAGGGCAUGUCUCUAUUGGUAGGUGAUAUGGUGAUAUUUCAUUUGAAUUAGAGGCUUCAGAAAUUCACUUGCCAAAGGAGAGCUGCCCUGUGAGUGUUUAGCUUAAACA


mirna_acc: MI0001744
mirna_id: mtr-MIR399d
description: Medicago truncatula miR399d stem-loop
organism: mtr
sequence:
UAAAGUAAGCAAAUCAGUCAUAGGGCAUGUCUCUAUUGGCAGGUGAUAUGGUGAUAUUUCAUUUGACUUUAAGGCUCUAAAAAUUCACUUGCCAAAGGAGAGCUGCCCUACGAGUGUUUAGCUUAAACA


mirna_acc: MI0001745
mirna_id: mtr-MIR393a
previous_mirna_id: mtr-MIR393
description: Medicago truncatula miR393 stem-loop
organism: mtr
sequence:
AACUGCAACUUGAGGAGGCAUCCAAAGGGAUCGCAUUGAUCCUAUAAUAUUUCAACUUUAGUCACUUUAAUUUUCUCUCAUAUAAUACUUAAUUGGGAUCAUGCCAUCCCUUUGGAUUUCUCCUUUAGUAGCUAC


mirna_acc: MI0001746
mirna_id: mtr-MIR395a
description: Medicago truncatula miR395a stem-loop
organism: mtr
sequence:
UUUUUGUUGAUUGUUUCUUAGAGUUCCUUUGAACGCUUCAUGCAUGAGAAUAUGUAUUUGGUCUAAUAUCCAUUAGAAAAGAUAGUUCUUCAUCAAUGAAGUGUUUGGGGGAACUCUUGGGUUCAACCAGCACCA


mirna_acc: MI0001747
mirna_id: mtr-MIR395b
description: Medicago truncatula miR395b stem-loop
organism: mtr
sequence:
UACUUGUUGAUUUUCUCUUGGAGUUCCUCUGAAUGCUUCAAACAUGAGACAAUCUUGAUAGAAAUUAUGGAUAGUUCUUGUUCAAUGAAGUAUUUGGGGGAACUCUUGGAAUUGAAUCAACAUA


mirna_acc: MI0001748
mirna_id: mtr-MIR399c
description: Medicago truncatula miR399c stem-loop
organism: mtr
sequence:
GUUCUGCUGUUGAGGAAUGAUAGGGAAAAUCUCUUUUGGCAGAGAGGAGUAAAAAUCUUAAACAGGAAUGUUUCUGGUUUGCCAAAGGAGAUUUGCCCUGCCAUUUUUGACAGCUAUUG


mirna_acc: MI0001749
mirna_id: mtr-MIR399a
description: Medicago truncatula miR399a stem-loop
organism: mtr
sequence:
UCCAAGUUGCAGUUGAAUUACAGGGUGAGUUCUCCAUUGGCAGGUAGCUAGUCACUAUAUGAUAUGCAUUGCAAUCAUUUCUUAGUGUGCAAUCUGCCAAAGGAGAUUUGCCCAGCGAUUCUCCUGCAACUCUA


mirna_acc: MI0001750
mirna_id: mtr-MIR399e
description: Medicago truncatula miR399e stem-loop
organism: mtr
sequence:
UCCAAGUUGCAGUUGAAUUACAGGGUGAGUUCUCCAUUGGCAGGUAGCUAGCCACUAUAUGAUAUGCAUUGCAAUCAUCACUUAGUGUGUAAUCUGCCAAAGGAGAUUUGCCCAGCGAUUCUCAUGCAACUCUA


mirna_acc: MI0001751
mirna_id: mtr-MIR319a
previous_mirna_id: mtr-MIR319
description: Medicago truncatula miR319 stem-loop
organism: mtr
sequence:


mirna_acc: MI0001752
mirna_id: mtr-MIR156a
previous_mirna_id: mtr-MIR156
description: Medicago truncatula miR156 stem-loop
organism: mtr
sequence:


mirna_acc: MI0001753
mirna_id: mtr-MIR171a
previous_mirna_id: mtr-MIR171
description: Medicago truncatula miR171 stem-loop
organism: mtr
sequence:
UGAAUUCCCCUCCGCUUUUUGAUGUUGGCUUGUCUCAAUCAAAUCAAAGUUCUUGAAAUUUGAGUUCUUUAGUCUGAUUGAGUCGUGCCAAUAUCAUAUUAAGCGAUAAAAGUC


mirna_acc: MI0001754
mirna_id: sof-MIR156
description: Saccharum officinarum miR156 stem-loop
organism: sof
sequence:
GGUGGAGAAGAGGUGGAGGCUGACAGAAGAGAGUGAGCACACAUGGUGCCUUUCUUGCAUGAUGAACGAUCGAGAGGUUCAUGCUCGAAGCUAUGCGUGCUCACUUCUCUCUCUGUCAGCCGUUAGAACUCUCUCUC


mirna_acc: MI0001755
mirna_id: sof-MIR396
description: Saccharum officinarum miR396 stem-loop
organism: sof
sequence:
AGAUGGCCUUCUUUGUGAUCUUCCACAGCUUUCUUGAACUGCAUCUCUAAGAGGAGCAGCUCGAAGCCUCGAACUCUACCUGCAUGAGCAGGUGCAGUUCAAUAAAGCUGUGGGAAACUGCAGAGAGAGGCCAA


mirna_acc: MI0001756
mirna_id: sof-MIR159a
description: Saccharum officinarum miR159a stem-loop
organism: sof
sequence:


mirna_acc: MI0001757
mirna_id: sof-MIR159b
description: Saccharum officinarum miR159b stem-loop
organism: sof
sequence:


mirna_acc: MI0001758
mirna_id: sof-MIR159d
description: Saccharum officinarum miR159d stem-loop
organism: sof
sequence:


mirna_acc: MI0001759
mirna_id: sof-MIR159e
description: Saccharum officinarum miR159e stem-loop
organism: sof
sequence:


mirna_acc: MI0001760
mirna_id: sof-MIR159c
description: Saccharum officinarum miR159c stem-loop
organism: sof
sequence:


mirna_acc: MI0001761
mirna_id: sof-MIR167a
description: Saccharum officinarum miR167a stem-loop
organism: sof
sequence:
AGUGGUGCACCACAAGUUGGUGAAGCUGCCAGCAUGAUCUGAUGGUGGUAUAUAUGAAUAUAUGAUGUCUUUACCUCUGAUCUCUCCCUGACUGUCACCGAUCCAUGAAUCCAGGAUGAGGGGAGGGAAGAAAGAGGGAUAAUGAGCAUCAGGUCAUGCUGUAGUUUCAUCUGCUGGUGGGAGCACAU


mirna_acc: MI0001762
mirna_id: sof-MIR167b
description: Saccharum officinarum miR167b stem-loop
organism: sof
sequence:
AGUGGUGCACCACAAGUUGGUGAAGCUGCCAGCAUGAUCUGAUGGUGGUAUAUAUGAAUAUAUGAUGUCUUUACCUCUGAUCUCUCCCUGACUGUCACGGAUCCAUGAAUCCAGGAUGAGGGGAGGGAAGAAAGAGGGAUAAUGAGCAUCAGGUCAUGCUGUAGUUUCAUCUGCUGGUGGGAGCACAU


mirna_acc: MI0001763
mirna_id: sof-MIR168a
description: Saccharum officinarum miR168a stem-loop
organism: sof
sequence:
GCCGCCGCGCCGCCUCGGGCUCGCUUGGUGCAGAUCGGGACCCGCCGCCCGGCCGACGGGACGGAUCCCGCCUUGCACCAAGUGAAUCGGAGCCGGCGCAGCCA


mirna_acc: MI0001764
mirna_id: sof-MIR168b
description: Saccharum officinarum miR168b stem-loop
organism: sof
sequence:
CCGCCCCGCGCCGUCUGGGCUCGCUUGGGCAGAUCGGGACCCGCCGCCCGGCCGACGGGACGGAUCCCGCCUUGCACCAAGUGAAUCGGAGCCGGCGCAGCCA


mirna_acc: MI0001765
mirna_id: sof-MIR408a
description: Saccharum officinarum miR408a stem-loop
organism: sof
sequence:


mirna_acc: MI0001766
mirna_id: sof-MIR408b
description: Saccharum officinarum miR408b stem-loop
organism: sof
sequence:


mirna_acc: MI0001767
mirna_id: sof-MIR408c
description: Saccharum officinarum miR408c stem-loop
organism: sof
sequence:


mirna_acc: MI0001768
mirna_id: sof-MIR408d
description: Saccharum officinarum miR408d stem-loop
organism: sof
sequence:


mirna_acc: MI0001769
mirna_id: sof-MIR408e
description: Saccharum officinarum miR408e stem-loop
organism: sof
sequence:


mirna_acc: MI0001770
mirna_id: gma-MIR156d
description: Glycine max miR156d stem-loop
organism: gma
sequence:
CUACUUGGUAAUUAAGGUUGUUGACAGAAGAUAGAGAGCACAGAUGAUGAUAUGCAUAUUAUAUAAUAUAUAGCAGGGAACUCAUGAUGAAUUGUGCAUCUUACUCCUUUGUGCUCUCUAUACUUCUGUCAUCACCUUCAGCCUCCAUUUC


mirna_acc: MI0001771
mirna_id: gma-MIR156e
description: Glycine max miR156e stem-loop
organism: gma
sequence:
AGGAGGUGUUGGUGAUGCUGUUGACAGAAGAUAGAGAGCACUGAUGAUGAAAUGCAUGAAAGGGAAUGGCAUCUCACUCCUUUGUGCUCUCUAGUCUUCUGUCAUCAUCCUUCUCCCUCCCCUC


mirna_acc: MI0001772
mirna_id: gma-MIR156c
description: Glycine max miR156c stem-loop
organism: gma
sequence:
ACUUGACCACUAGGCUUAUCUCUUUCCGUUUCUGAGCAUGCAUACUCAUUCACAGCAUCAAAAUGCACAGAUCCUGAUGGAGAUUGCACAGGGCAGGUGAUGCUAGAUUGCACCAUACUCAACUCUGGACUUUGUGAUUGAAGUGUUGACAGAAGAUAGAGAGCACAACCUGAGUCAAAGGAUCC


mirna_acc: MI0001773
mirna_id: gma-MIR159a
previous_mirna_id: gma-MIR159
description: Glycine max miR159a stem-loop
organism: gma
sequence:


mirna_acc: MI0001774
mirna_id: gma-MIR160a
previous_mirna_id: gma-MIR160
description: Glycine max miR160 stem-loop
organism: gma
sequence:
CAUGCAUACAUAUGUGUAUGUGCCUGGCUCCCUGUAUGCCAUUUGUAGAGCUCAUCGAAGCAUCAAUGACCUUUGUGGAUGGCGUAUGAGGAGCCAAGCAUAUUUCAUAUACAUACAUG


mirna_acc: MI0001775
mirna_id: gma-MIR166a
description: Glycine max miR166a stem-loop
organism: gma
sequence:
ACGGAAGCUUUGUCUUUUGAGGGGAAUGUUGUCUGGCUCGAGGACCCUUCUUCAUCUUGAUCUUGUGUAGACUACUAUGCUUGUGGUCAAGGAAUACAUAGUGUUGUCGGACCAGGCUUCAUUCCCCCCAAUUAUAUGCUUCCAAA


mirna_acc: MI0001776
mirna_id: gma-MIR166b
description: Glycine max miR166b stem-loop
organism: gma
sequence:
GCUUGCAAAGGUGAGGUUGAGAGGAAUGUUGUCUGGCUCGAGGUCAUGGAGGAGGAGGAGGAGUAGAGUACUGAGAUCAGUGAAAGUUUCCAAUGGAAAUUUACCCUCUUACACAAAAAAAUGAUUCUCGGACCAGGCUUCAUUCCCCCCACCCAACUUUUGCUUUU


mirna_acc: MI0001777
mirna_id: gma-MIR167a
description: Glycine max miR167a stem-loop
organism: gma
sequence:
GAAGUUCGCAAAGGAAAAAGUGAAGCUGCCAGCAUGAUCUACCUUUGGUUAGAGAGCUCAAGAGUGCUAACCCUGACUAGGUCAUGCUGUGACAGCCUCACUCCUUCCUAUUUGGGGAC


mirna_acc: MI0001778
mirna_id: gma-MIR167b
description: Glycine max miR167b stem-loop
organism: gma
sequence:
AAGGGUCACAAAGGAAAAAGUGAAGCUGCCAGCAUGAUCUAGCUUUGGUUAGUGGGAGCGAGAGAGUGCUAACCCUCACUAGGUCAUGCUGUGCUAGCCUCACUCCUUCCUAUUUGGAGAC


mirna_acc: MI0001779
mirna_id: gma-MIR168a
previous_mirna_id: gma-MIR168
description: Glycine max miR168 stem-loop
organism: gma
sequence:
CACUGUGCGGUCUCUAAUUCGCUUGGUGCAGGUCGGGAACCGGUUUUCGCGCGGAAUGGAGGAGCGGUCGCCGGCGCCGAAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAGGCCGCGGUGAAC


mirna_acc: MI0001780
mirna_id: gma-MIR172a
description: Glycine max miR172a stem-loop
organism: gma
sequence:
UUAACAGUCGUUAUUUGCGGAUGUAGCAUCAUCAAGAUUCACAUGCAAGCGCAGGUGGUGGGUGGGACUUGAUGCAAUCUAAGUGCUGUGCCAGCCAAGCCAUAGGUCUUUUGGAACUGAGAAUCUUGAUGAUGCUGCAUCAGCCAUAAACGACUUCAC


mirna_acc: MI0001781
mirna_id: gma-MIR172b
description: Glycine max miR172b stem-loop
organism: gma
sequence:
UUGACAGUCGUUGUUUGCGGAUGUAGCAUCAUCAAGAUUCACAUGCAAAUGAAGGUGGGUGGGACUAUGAUGCAAUCCAAGUGCUCUGCCAAUCCAUCGGUCUUUUUGAUGUGAGAAUCUUGAUGAUGCUGCAUCAGCCAUAAACGGCUUUAA


mirna_acc: MI0001782
mirna_id: gma-MIR319a
description: Glycine max miR319a stem-loop
organism: gma
sequence:


mirna_acc: MI0001783
mirna_id: gma-MIR319b
description: Glycine max miR319b stem-loop
organism: gma
sequence:


mirna_acc: MI0001784
mirna_id: gma-MIR156a
description: Glycine max miR156a stem-loop
organism: gma
sequence:
CACACCAGAUUGAGAGAGGCUGACAGAAGAGAGUGAGCACAUGCUAGUGGUAUUUGUAUGAGGGCAUACAAUUGCGGGUGCGUGCUCACUUCUCUAUCUGUCAGCUUCCCAUUCUUUUUUAC


mirna_acc: MI0001785
mirna_id: gma-MIR396a
description: Glycine max miR396a stem-loop
organism: gma
sequence:
UCAUGGCUCUCUUUGUAUUCUUCCACAGCUUUCUUGAACUGCAUCCAAAGAGUUCCUUUGCAUGCAUGCCAUGGCACUCUUACUCCCAAAUCUUGUUUUGCGGUUCAAUAAAGCUGUGGGAAGAUACAGAUAGGGUCAAC


mirna_acc: MI0001786
mirna_id: gma-MIR396b
description: Glycine max miR396b stem-loop
organism: gma
sequence:
CUCAAGUCCUGGUCAUGCUUUUCCACAGCUUUCUUGAACUUCUUAUGCAUCUUAUAUCUCUCCACCUCCAGGAUUUUAAGCCCUAGAAGCUCAAGAAAGCUGUGGGAGAAUAUGGCAAUUCAGGCU


mirna_acc: MI0001787
mirna_id: gma-MIR398a
description: Glycine max miR398a stem-loop
organism: gma
sequence:
CUCGGAGGAGUGAAUCUGAGAACACAAGGCUGGUUUGCACUGCUAUAUCAUCUAUUGGUAUAAGGUGAAUUUACUUUGUGUUCUCAGGUCACCCCUUUGAGCCAACCUGUUGACAU


mirna_acc: MI0001788
mirna_id: gma-MIR398b
description: Glycine max miR398b stem-loop
organism: gma
sequence:
AGUCCAAAUGGUUUAUCUCAGAGGAGUGGAUCUGAGAACACAAGGCUGGUUUGCACUGCUAUAUUAUGAUCGAUUGGUAUAAGGUGAAUUUACUUUGUGUUCUCAGGUCACCCCUUUGAGCCAACCUGUUGACAU


mirna_acc: MI0001789
mirna_id: gma-MIR319c
description: Glycine max miR319c stem-loop
organism: gma
sequence:


mirna_acc: MI0001790
mirna_id: gma-MIR156b
description: Glycine max miR156b stem-loop
organism: gma
sequence:
UGAUGUGAGAUAUCUCAUGUUGACAGAAGAGAGAGAGCACAACCCGGGAAUGGCUAAAGGAGUCUUUGCCUUUGUUGGGAGUGUGCCCUCUCUUCCUCUGUCAUCAUCACAUUCACAUGC


mirna_acc: MI0001791
mirna_id: gma-MIR169a
previous_mirna_id: gma-MIR169
description: Glycine max miR169a stem-loop
organism: gma
sequence:
AAGAGGAAGAGAGAGUGAUGCAGCCAAGGAUGACUUGCCGGCGUUAUUAUUUGCUCAUGUUCAUGCUCACCGGUUUCCUUGCCGGCAAGUUGUGUUUGGCUAUGUUUUGCUCUCUUCUUCU


mirna_acc: MI0001792
mirna_id: zma-MIR171d
description: Zea mays miR171d stem-loop
organism: zma
sequence:
AGAAAUGGAAGUGUAACUAUGGUGUUGGCUCGGCUCACUCAGAAGUUGAAGCCGAAUCCAAAUGGUAGCUGCCGGCGUUUCUGAUUGAGCCGUGCCAAUAUCUCAGUACUCUUUCAUGCUG


mirna_acc: MI0001793
mirna_id: zma-MIR171f
description: Zea mays miR171f stem-loop
organism: zma
sequence:
UUGGUUGUUGGCUGAGAGAGUGCGAUGUUGGCAUGGCUCAAUCAACUCGCCGGCCGCGGGUGGCUUAUAGCUUAAUUCUGCGCAUUCGAUCGAGGUGCGGGCGCAGUGUUUAAUUGAUUGAGCCGUGCCAAUAUCACAACCUUCUCUAGCCUAUA


mirna_acc: MI0001794
mirna_id: zma-MIR394a
description: Zea mays miR394a stem-loop
organism: zma
sequence:
GGCGCUUACUGAAGAGUUCCUUGGCAUUCUGUCCACCUCCUCUCGCCGAUCUUGCAGAAAGUUUACCAGUUCUGUUGCAUUUUUUUUGGAGGUGGGCAUACUGCCAAUGGAGCUGUGUAGGCCUCC


mirna_acc: MI0001795
mirna_id: zma-MIR394b
description: Zea mays miR394b stem-loop
organism: zma
sequence:
UGGCGCUUACUGAGAGUUCCUUGGCAUUCUGUCCACCUCCCUUCUUGACGAUCUUGCAGAAAGUUUGCUUUUUUUGUUUGUUUGGAGGUGGGCAUACUGCCAAUGGAGCUGCGUAGGCCUCC


mirna_acc: MI0001796
mirna_id: zma-MIR395b
description: Zea mays miR395b stem-loop
organism: zma
sequence:
GCAACGUUUUGUGUUACUAGGAGUUCCCUACAAGCACUUCACAAUACCUUGGCUCAAUAAAUUAAAGGCCAGUUGUGAAGUGUUUGGGGGAACUCUUGGUAUCAUGAAGCAUUU


mirna_acc: MI0001798
mirna_id: zma-MIR395c
previous_mirna_id: zma-MIR395d
description: Zea mays miR395c stem-loop
organism: zma
sequence:
UCUUGGUUGGUUCUCCCUUGGAGUUCCCUGCAAACACUUCACCAGCUAGGCCAUAGUGCCGGCCCUUGCACAAUGUUGUAUCUGAUCACCUAGCUAGUGUGAAGUGUUUGGAGGAACUCUAGGUGUUAUCCAGCAAUG


mirna_acc: MI0001799
mirna_id: zma-MIR395a
description: Zea mays miR395a stem-loop
organism: zma
sequence:
UAUUGGUUGGUUGUCACCUGGAGUUCUCCUCAAACCACUUCAGUUGCUGCACCUAGCUAGUUUAAUGGCACUGUGCUUGCGUGCAAGCGGCCGGAGCUGUGUGUAGCUAGUGAAGUGUUUGGGGGAACUCUGGGUGUCAAUCAGCAAUU


mirna_acc: MI0001800
mirna_id: zma-MIR396b
description: Zea mays miR396b stem-loop
organism: zma
sequence:
AGAUGGCCUUCUUUGUGAUCUUCCACAGCUUUCUUGAACUGCAUCUCUCAGAGGAGCGGCAGCUUCAACUCCUCCACCCGCAUCAGCAGGUGCAUGCAGUUCAAUAAAGCUGUGGGAAACUGCAGAGAGAGGCCAG


mirna_acc: MI0001801
mirna_id: zma-MIR396a
description: Zea mays miR396a stem-loop
organism: zma
sequence:
ACAUGGCCCUCCUUGCCGUCUUCCACAGCUUUCUUGAACUGCAUGCCGCCGGCUGGUGGAUGCUGCGCGCUUGAAUUCCGGUCGAUCCCAAGAGGCGCAGUUCAAUAAAGCUGUGGGAAACUGCAGAGAGAGGCCAC


mirna_acc: MI0001802
mirna_id: zma-MIR399a
description: Zea mays miR399a stem-loop
organism: zma
sequence:
UGUGAAGAGGGUGAGAAUCACAGUGCGGUUCUCCUCUGGCACGAAGGCUGGCCAGAGCAGCUUAUAUUGCCACCACCCUUCCUUGCCAAAGGAGAAUUGCCCUGCCAUUCACAACCCUGCAAU


mirna_acc: MI0001803
mirna_id: zma-MIR399c
description: Zea mays miR399c stem-loop
organism: zma
sequence:


mirna_acc: MI0001804
mirna_id: zma-MIR399b
description: Zea mays miR399b stem-loop
organism: zma
sequence:
GUAGCUCAGGGUGCGAAUCACAGUGCAGCUCUCCUCUGGCAUGAAGGCUGUGAGAGAGGCAUGACAAUUUCUGGCCUUGCCCUGCCAAAGGAGAGCUGUCCUGCCAUUCAUUAGCCCUGCAA


mirna_acc: MI0001805
mirna_id: zma-MIR399d
description: Zea mays miR399d stem-loop
organism: zma
sequence:
UCAAGGUGAGAAUCACAGUGUGGCUCUCCUCUGGCAUGAAGGCGCGGCUGAGAGGCACGAACAGUUUCUGGCCUUCCCCUGCCAAUGCCAAAGGAGAGCUGCCCUGCCAUUCGUUAGCCCUGCAA


mirna_acc: MI0001806
mirna_id: zma-MIR399e
description: Zea mays miR399e stem-loop
organism: zma
sequence:
AUGCCUAAGCUGUCCAGUUUCAGGGCUUCUCUUUCUUGGCAGGGAAGCAUGAGAUGCCAUAGCUCUCUGCUCUCUUCAACCCUCUGCCAAAGGAGAGUUGCCCUGUAACAGGACUCAGCUUAUG


mirna_acc: MI0001807
mirna_id: zma-MIR399f
description: Zea mays miR399f stem-loop
organism: zma
sequence:
CAGGAUGUGCACCUGCAUUUCUGGGCAACUUCUCCUUUGGCAGAUGCGCGAGAAUGUGCCACUGCUGCCAAAGGAAAUUUGCCCCGGAAUUCAUCUGCACAAGCA


mirna_acc: MI0001808
mirna_id: zma-MIR156j
description: Zea mays miR156j stem-loop
organism: zma
sequence:
CGAGUGGACCUCGGGAGCGAUGACAGAAGAGAGAGAGCACAACCCAGCACCAGCGAGGAAAAGCCUCGCUUCUGCGAGGGCCGUGUGCUCUCUGCUCUCACUGUCAUCGCCCACAGGCCACCGAA


mirna_acc: MI0001809
mirna_id: zma-MIR159a
description: Zea mays miR159a stem-loop
organism: zma
sequence:


mirna_acc: MI0001810
mirna_id: zma-MIR159b
description: Zea mays miR159b stem-loop
organism: zma
sequence:


mirna_acc: MI0001811
mirna_id: zma-MIR159c
description: Zea mays miR159c stem-loop
organism: zma
sequence:


mirna_acc: MI0001812
mirna_id: zma-MIR159d
description: Zea mays miR159d stem-loop
organism: zma
sequence:


mirna_acc: MI0001813
mirna_id: zma-MIR319a
description: Zea mays miR319a stem-loop
organism: zma
sequence:


mirna_acc: MI0001814
mirna_id: zma-MIR319c
description: Zea mays miR319c stem-loop
organism: zma
sequence:


mirna_acc: MI0001815
mirna_id: zma-MIR319b
description: Zea mays miR319b stem-loop
organism: zma
sequence:


mirna_acc: MI0001816
mirna_id: zma-MIR319d
description: Zea mays miR319d stem-loop
organism: zma
sequence:


mirna_acc: MI0001817
mirna_id: zma-MIR166k
description: Zea mays miR166k stem-loop
organism: zma
sequence:
GCAUGCUCGGGUUAGGUCAGGGGGAUUGUUGUCUGGCUCGGGGUCUCCGGUCGAGAUCGAUUCAUAACAUAUACGUACGUGCUUCUAGCCUUGCCGGCGGAGCUAGUCGUUGUCGUCGACCGGAGAUUUCGGACCAGGCUUCAAUCCCUUUGACCAUGCGGCAUUAGG


mirna_acc: MI0001818
mirna_id: zma-MIR166j
description: Zea mays miR166j stem-loop
organism: zma
sequence:
CAAGUUGAAGAUUAGGUUAAGGGGUUUGUUUGUCUGGUUCAAGGUCGCCACACAGCAGGGAAAACCCAUUUCGCCUUGAAGCAUGCACCAUGAUGGGUGUACCUGUUGGUGAUCUCGGACCAGGCUUCAAUCCCUUUAACUAGCGUCUGCAUAU


mirna_acc: MI0001819
mirna_id: zma-MIR167e
description: Zea mays miR167e stem-loop
organism: zma
sequence:
UUGGUGUGUCCUCUAGUAGCUGAAGCUGCCAGCAUGAUCUGAGGUGUCCACAGCAUAUAUAUGGAAGCAGCUAGCGAUCAGAUCAUGCUGUGCAGUUUCAUCUGCUCGUGGACGCACAC


mirna_acc: MI0001820
mirna_id: zma-MIR167f
description: Zea mays miR167f stem-loop
organism: zma
sequence:
CGUGCACCUUAUUAAGCAGCUGAAGCUGCCAGCAUGAUCUGAUCUUUCGUUUACUGGCAACUUUGGAUACCUAAGAUCCAGAUCGUGCUGCGCAGUUUCACCUGCUAAUUGGAGCACAG


mirna_acc: MI0001821
mirna_id: zma-MIR167g
description: Zea mays miR167g stem-loop
organism: zma
sequence:


mirna_acc: MI0001822
mirna_id: zma-MIR167h
description: Zea mays miR167h stem-loop
organism: zma
sequence:
ACUUUGCUGCUGUGAGAGGUUGAAGCUGCCAGCAUGAUCUGGCUGCUCAGACGCCGGCGGGCGUCUCGAGUGCUCGCUCGAUCGUCGGUGACGCUUGGAUUCACCAGAUCAUGUUGCAGCUUCACUCUCUCGCAGCCAGCAAA


mirna_acc: MI0001823
mirna_id: zma-MIR167i
description: Zea mays miR167i stem-loop
organism: zma
sequence:
ACUUCGCUGGUGUGAGAGCUUGAAGCUGCCAGCAUGAUCUGGCURCUCAAACGCCGCCGGCCUCCCAAGUGCUCGAUCGGUGGCGCUUCACCAGAUCAUGUUGCAGCUUCACUCUCUCGCAACCAGCGAA


mirna_acc: MI0001824
mirna_id: zma-MIR168a
description: Zea mays miR168a stem-loop
organism: zma
sequence:
GAAGCCGCGCCGCCUCGGGCUCGCUUGGUGCAGAUCGGGACCCGCCGCCCGGCCGACGGGACGGAUCCCGCCUUGCACCAAGUGAAUCGGAGCCGGCGGAGCGA


mirna_acc: MI0001825
mirna_id: zma-MIR168b
description: Zea mays miR168b stem-loop
organism: zma
sequence:
UCCGCCGCGCCGUCUCGGGCUCGCUUGGUGCAGAUCGGGACCCGCCGCCCGGCCGACGGGACGGAUCCCGCCUUGCAUCAAGUGAAUCGGAGCCGGCGCAGCGA


mirna_acc: MI0001826
mirna_id: zma-MIR169c
description: Zea mays miR169c stem-loop
organism: zma
sequence:
AUGAGGUAGAGAACGGGAUGCAGCCAAGGAUGACUUGCCGGCUCCUGGAACCUGGAGGCGUCUCAGCUUGCUGUGCUGUGGCUUAGAACUUAGUCGGCAAGUCUGUCCUUGGCUACACCUAGUUCUCUUCCUCU


mirna_acc: MI0001827
mirna_id: zma-MIR169f
description: Zea mays miR169f stem-loop
organism: zma
sequence:
ACCAGAGCUGAUUCGUUCAGUAGCCAAGGAUGACUUGCCUAGGUAUAUAUGCAUGGGCUAUGGCUACAUGCCUGAGAGCCAGUCUCUUGUGACGCUGAGCAUGUAUAGUGUAGGCAUGUCUUCCUUGGCUACUCGGAGCGGCUCUAGUCA


mirna_acc: MI0001828
mirna_id: zma-MIR169g
description: Zea mays miR169g stem-loop
organism: zma
sequence:
CAGAGCUAGCCUGCCUCUGGUAGCCAAGGAUGACUUGCCUACAUGGUCUCGCUAGUUCCGGUUGUUGCAUGCAUGCCACUAUGCCAGUCCUGCUGGGUUUGUGGGCGGUCUCCUUGGCUAGCCUGAGUGGCUCUUGCCUG


mirna_acc: MI0001829
mirna_id: zma-MIR169h
description: Zea mays miR169h stem-loop
organism: zma
sequence:
CAAUAAGGGCCUGCCUCUGAUAGCCAAGGAUGACUUGCCUAUGUCCUUUGUUUACAAAGGAUCAGAAUUGUGGACCUUUGUGUUGGUUCGUAGGCAGUCUCCUUGGCUAGCCUGAGUGGCCCCUAUUG


mirna_acc: MI0001830
mirna_id: zma-MIR169i
description: Zea mays miR169i stem-loop
organism: zma
sequence:
GAUGAGAGUGGUAGCUCUGGUAGCCAAGGAUGACUUGCCUGUGUGCUGGCCACGCUCCCCUCAUGCAAGGACCAUCUCGUGUCGACCGACGAGCGAGCGAGCGAUCGAUCGAUGAGAGGAUGACGAAGCUUGGGGUGUACGUUGGUCUCUCACGGGCAGUCUCCUUGGCUAGCCCUGACUCACUCUUACCG


mirna_acc: MI0001831
mirna_id: zma-MIR169k
description: Zea mays miR169k stem-loop
organism: zma
sequence:
CGAUGAGAGCACUGCUCUGGUAGCCAAGGAUGACUUGCCUGUGGCCUCCAUCAGUCGCAGAGGACGCUGUUCUUCUGCUUGUGGUUGUCGAUCGCAGGCAGUCUCCUUGGCUAGCCCGAGCGGCUCUCAUCCA


mirna_acc: MI0001832
mirna_id: zma-MIR169j
description: Zea mays miR169j stem-loop
organism: zma
sequence:
GCGAUAAGAGUCUGUCCAGAUAGCCAAGGAUGACUUGCCUGUGGCUUCUUGGCUUGGCUUGGCUCGGGCAAAACCUUGUGCACGUUUUAUUGCUCGCCUCGUGGCCUCGAUCACAGGCAGUCUCCUUGGCUAGUCCGGGCGGGCCCCUUAU


mirna_acc: MI0001833
mirna_id: zma-MIR169d
description: Zea mays miR169d stem-loop
organism: zma
sequence:
GCAAUAGGGGCCACUCAGGCUAGCCAAGGAGACUGCCUAUGAACCUCUCAAUGGUCCACACAUUCAGGUCCUUUGUAAACAAAGGACAUAGGCAAGUCAUCCUUGGCUAUCAGAGGUAGGCCCUUAUU


mirna_acc: MI0001834
mirna_id: zma-MIR169e
description: Zea mays miR169e stem-loop
organism: zma
sequence:
GCAAUAGGGGCCACUCAGGCUAGCCAAGGAGACUGCCUACGAACCAACACAAAGGUCCACAAUUCUGAUCCUUUGUAAACAAAGGACAUAGGCAAGUCAUCCUUGGCUAUCAGAGGCAGGCCCUUAUU


mirna_acc: MI0001835
mirna_id: zma-MIR171c
description: Zea mays miR171c stem-loop
organism: zma
sequence:
GGGGAAUCGAAAACCUACGGGAUAUUGGUGCGGUUCAAUCAGAAAGCUUGCGCUCCAAAGCCCAGGGGCUCCACUCUUUGACUGAGCCGUGCCAAUAUCACGUCCUCGCUUUGCUUGC


mirna_acc: MI0001836
mirna_id: zma-MIR171j
description: Zea mays miR171j stem-loop
organism: zma
sequence:
AAUGGCCGCGAGCUAGACGGGGUAUUGACGCGGUUCAAUUCGAGAGCUCGAGCCCUAGCAGAGGCCAGGGGGGGUGGGGCUCUGCUCUCUGAUUGAGCCGUGCCAAUAUCACGUCCCACUCGCCCUCGC


mirna_acc: MI0001837
mirna_id: zma-MIR171e
description: Zea mays miR171e stem-loop
organism: zma
sequence:
AGAAAUGGAAUAGUAGCUAUGAUGUUGGCUCGGCUCACUCAGACGACGUACGCGCGCGAGAUCAUGUGCUAUGCCGCUGCUGUUUCUGAUUGAGCCGUGCCAAUAUCUUAGUACUCUUCCAUGCAU


mirna_acc: MI0001838
mirna_id: zma-MIR171i
description: Zea mays miR171i stem-loop
organism: zma
sequence:
CUGGUUGGCUGAGAGAGUGCGAUGUUGGCACGGUUCAAUCAAAUCGCCGGCCGGGUUGACUUGUUGAUUGAGCCGUGCCAAUAUCACAACCUUCUCUAGCCUAG


mirna_acc: MI0001839
mirna_id: zma-MIR171g
description: Zea mays miR171g stem-loop
organism: zma
sequence:
AGAACGAGGCGACAUGGCAUGGUAUUGACUUGGCUCAUCUCUCGCCCACACCAGAAUCCACAAGUGCCGGAGGAGGUGAGCCGAGCCAAUAUCACUUCAUGUCAUCUAGCGU


mirna_acc: MI0001840
mirna_id: zma-MIR172e
description: Zea mays miR172e stem-loop
organism: zma
sequence:
CAGCCAGCCGGUGAUUUCUGGAGUGGCAUCAUCAAGAUUCACACACUGCAUGCCAACAUAAUGCGCGUGUUCAUGCAUCCAUCGCCGCCGCUGCAUCAUGCAUCAUAUAUAAUAUAUAUAUAUGUGUAUGUGUGGGAAUCUUGAUGAUGCUGCAUUGGAUAUCAAGGGCUAUAU


mirna_acc: MI0001841
mirna_id: zma-MIR166l
description: Zea mays miR166l stem-loop
organism: zma
sequence:
AAAGAACGGGAGGAGGGUUUCUGGAAUGGAGGCUGGUCCAAGAUCCUUAGGUGUUAAAGCAUUAUAUUGCCUUGUUUCUGGUUUUGUGUUUGAGAUCUCGGACCAGGCUUCAUUCCUCAAACCCACGCUCCCGACAC


mirna_acc: MI0001842
mirna_id: zma-MIR166m
description: Zea mays miR166m stem-loop
organism: zma
sequence:
UCCUUGGUCUGGGGGUUUGUGGGGAAUGUUGGCUGGCUCGAGGCAUCCGCGUCCUGGCUCGCAGUCGCAGCGCAGAUCGUGUUUUGCCUGCUACCGGCCGGACAGAUCGAGAGGCGUCGGACCAGGCUUCAUUCCUCGCAAACCGGUGCAUCCCCA


mirna_acc: MI0001843
mirna_id: zma-MIR171k
description: Zea mays miR171k stem-loop
organism: zma
sequence:
GGGAGGAAGAAGACGACAUGGCGUGGUAUUGUUUCGGCUCAUGUCCUUCUUGACUGGAUGUGAUGUGAGCCGAACCAAUAUCACUCAUGUAUUCUUCAUUCUGA


mirna_acc: MI0001844
mirna_id: zma-MIR171h
description: Zea mays miR171h stem-loop
organism: zma
sequence:
GGGAGGAAGGAGACGACAUGGCGUGGUAUUGUUUCGGCUCAUGUCCUUCUUCGAUCGAGUCUUGCCGUUGGAUUUGGAUGUGAUGUGAGCCGAACCAAUAUCACUCAUGUACUCUUCAUUCCCA


mirna_acc: MI0001845
mirna_id: zma-MIR393a
previous_mirna_id: zma-MIR393
description: Zea mays miR393a stem-loop
organism: zma
sequence:
CCAGGAAGCUGGUGGAGGACUCCAAAGGGAUCGCAUUGAUCUAUUCUCACCUGCCGCCUGCUGCAUGCGAUGCGAGUCGACGACAAGAUCAGUGCAAUCCCUUUGGAAUUUUCCACUCGCGCCUUC


mirna_acc: MI0001846
mirna_id: zma-MIR408a
previous_mirna_id: zma-MIR408
description: Zea mays miR408 stem-loop
organism: zma
sequence:
GGGGUUGGUUUUGAUUUGGAGACAGGGAUGAGACAGAGCAUGGGAUGGGGCCAUCAACAAAGUGGAGGGACUAGCUUGCGAGGCAGAAAGAAGGUGCCAGUGCCGGUGCCUCCCCGGUGAAACGAUGAUGGGAGUGUUGUUGCUCCCUCCCCUGCACUGCCUCUUCCCUGGCUCCGAUCCCCCACCGUUGC


mirna_acc: MI0001847
mirna_id: zma-MIR156k
description: Zea mays miR156k stem-loop
organism: zma
sequence:
GGCUUAGGCCCCGAAGAGAUUGACAGAAGAGAGCGAGCACCUGGCGCGGCGACCGGCAUGGAACGCAUGCCGUCCCCGCCGCGUGCUCGCUUCUCUUUCUGUCAGCCUCUCCCUCGUCCUGAG


mirna_acc: MI0001848
mirna_id: zma-MIR160f
description: Zea mays miR160f stem-loop
organism: zma
sequence:
GAGGUGAAAGAUAGGGAAUAUGCCUGGCUCCCUGUAUGCCGCUCGCAUGGCUACCACCGCCUGUGGUCGUUGCGGCUGGCGUGCGAGGUGCCAGGCAUGUUUUAAUAAUUAUCUCC


mirna_acc: MI0001849
mirna_id: sbi-MIR399h
description: Sorghum bicolor miR399h stem-loop
organism: sbi
sequence:
AGUGUUCAGGGUAAGAAUCACAGUGCGGUUCUCCUCUGGCAUGGAGGCCAACAUAGCAGGCAUUGGAGAAUGCACAGCGCUAUCGCCAUCCCUGCCAAAGGAGAAUUGCCCUGCCAUUCGGUAUAACCCUGG


mirna_acc: MI0001850
mirna_id: sbi-MIR399i
description: Sorghum bicolor miR399i stem-loop
organism: sbi
sequence:
AUGCCUAAGCUGUCCAGUUUCAGGGCUUCUCUUUCUUGGCAGGGAGCAUGAGAAGCCAUAGCUCUGCUCUGUUCUGCCCUCUGCCAAAGGAGAGUUGCCCUGUAACAGGACUCAGCUUAUG


mirna_acc: MI0001851
mirna_id: sbi-MIR159b
description: Sorghum bicolor miR159b stem-loop
organism: sbi
sequence:


mirna_acc: MI0001852
mirna_id: sbi-MIR164c
description: Sorghum bicolor miR164c stem-loop
organism: sbi
sequence:
UAUGGUGUGUUUGUGCAGGGUGGAGAAGCAGGACACGUGAGCGACCAUCCAGUUUCCAUCGCUGGCUCUCCGCUGCGGGCGCUGCCGUGCGUUGGAUCGUCGUUGGGUGGUCGCUCAUGUGUCCGUCCUCUCCACCGAGCACCGGUACAUCCG


mirna_acc: MI0001853
mirna_id: sbi-MIR166g
description: Sorghum bicolor miR166g stem-loop
organism: sbi
sequence:
UCAUGCUCGGAUUAGGUUAGGGGGAUUGUUGUCUGGCUCGGGGUCUCCGGUCGAGAAUCCUUGGCCUUGCCGGAGUUGUCGUUGACCGGAGAUUUCGGACCAGGCUUCAAUCCCUUUAACCAUGCGGCAUUUAG


mirna_acc: MI0001854
mirna_id: sbi-MIR171f
description: Sorghum bicolor miR171f stem-loop
organism: sbi
sequence:
UGAGAGAAUAAGACGACAUGGCGUGAUGUUGUUUCGGCUCAUGCAUAUCCUUCUUGAGUGUAUCAUCAGGAAAGAGGCGAUGAGCCGAACCAAUAUCACUCAUGUAUUCUUCAUUCAUA


mirna_acc: MI0001855
mirna_id: sbi-MIR395f
description: Sorghum bicolor miR395f stem-loop
organism: sbi
sequence:
ACAAUGUUUGGUGUUACCACGAGUUCCCUUCAAGCACUUCAUGAGGCACCAUUAAAUAACUCUAUUUAAGAUUAGGUGUAAUAUGAAGUGUUUGGGGGAACUCUUGGUGAUACUCAACAUCG


mirna_acc: MI0001856
mirna_id: sbi-MIR156e
description: Sorghum bicolor miR156e stem-loop
organism: sbi
sequence:
CGAUUAGGCCCUGAAGAGAUUGACAGAAGAGAGCGAGCACCCGGCGCGGCGGCCGGCAUGGAGCGCAUGCCGUCCCCGCCGCGUGCUCGCUUCUCUUUCUGUCAGCCUCUCUCUCGUCCUGGG


mirna_acc: MI0001860
mirna_id: dre-let-7a-3
previous_mirna_id: dre-let-7a-4
description: Danio rerio let-7a-3 stem-loop
organism: dre
sequence:
GAGACUGUCGUUUGGGGUGAGGUAGUAGGUUGUAUAGUUUGAGGGUUUAACCCUUGCUGUCAGAUAACUAUACAACUUACUGUCUUUCCCGAAGUGGCCGUAGUGUC


mirna_acc: MI0001862
mirna_id: dre-let-7a-5
previous_mirna_id: dre-let-7a-6
description: Danio rerio let-7a-5 stem-loop
organism: dre
sequence:
GUACGUGUUUUUGGUGUCUGGACAAGGUGAGGUAGUAGGUUGUAUAGUUUGGUGGGAGGGAUCAAACCCUGUUCAGCUGAUAACUAUACAGUCUAUUGCCUUCCUUGUGUCACCUAAGGUCUGC


mirna_acc: MI0001863
mirna_id: dre-let-7a-6
previous_mirna_id: dre-let-7a-7
description: Danio rerio let-7a-6 stem-loop
organism: dre
sequence:
CACAGUGAACCUGUGUGUUUCUUCAAGGUGAGGUAGUAGGUUGUAUAGUUUGUGGGAAGGAUCACAUCCUAUUCAGGUGAUAACUAUACAGUCUAUUGCCUUCCCUGAGAGACACAAUGACCACGAGUG


mirna_acc: MI0001866
mirna_id: dre-let-7c-1
description: Danio rerio let-7c-1 stem-loop
organism: dre
sequence:
CUGAGAGUGUGUGCAUCCAGGCUGAGGUAGUAGGUUGUAUGGUUUAGAAUUUUGCCCUGGGAGUUAACUGUACAACCUUCUAGCUUUCCUUGGAGCUCACAAGCCAG


mirna_acc: MI0001871
mirna_id: dre-let-7e
previous_mirna_id: dre-let-7e;dre-let-7e-1
description: Danio rerio let-7e stem-loop
organism: dre
sequence:
GCUGUUCUUGGGGCUGAGGUAGUAGAUUGAAUAGUUGUGGAGCCCUGCGCUCUCUCUCUGAGAUAACUAUACAAUCUACUGUCUUUCCUAAGGCGACAGC


mirna_acc: MI0001872
mirna_id: dre-let-7f
description: Danio rerio let-7f stem-loop
organism: dre
sequence:
UGGUAAUGCUUGUGCAGUGUGAGGUAGUAGAUUGUAUAGUUGUAGGGUAGUGAUUUUAUCCUGUGUAGAAGAUAACUAUACAAUCUAUUGCCUUCCCUGAGGGGCAGAAAUACACA


mirna_acc: MI0001875
mirna_id: dre-let-7h
description: Danio rerio let-7h stem-loop
organism: dre
sequence:
GAGUUGGCUGUGUUGUGGUGAGGUAGUAAGUUGUGUUGUUGUUGGGGAUCAGUAUAGUAUGGCCCUUGAAGGAGAUAACUAUACAAUUUACUGCCUUCCAUAAUGCAGACUCUC


mirna_acc: MI0001878
mirna_id: dre-mir-1-1
description: Danio rerio miR-1-1 stem-loop
organism: dre
sequence:
GCCCAUAUAUCCCGCUUGGUAGACAUACUUCUUUAUAUGCCCAUAUGAACAAGAGCAGCUAUGGAAUGUAAAGAAGUAUGUAUCCCAGGUGAGAGAAAAACGGGGC


mirna_acc: MI0001879
mirna_id: dre-mir-7a-3
description: Danio rerio miR-7a-3 stem-loop
organism: dre
sequence:
UGUGUGUGUGUUCUGCCCUCUGCGGAGUGGAAGACUAGUGAUUUUGUUGUGAAAAUGAACAAAAACCAACAACAAACCGCAGUCGUCCUCUCAGCACGGGGCCCACACCUGCAGAGCACA


mirna_acc: MI0001881
mirna_id: dre-mir-9-2
description: Danio rerio miR-9-2 stem-loop
organism: dre
sequence:
GCUCUCCUCUGGUGACUUUUGCACUUGGAGGCGUGUUGUUAUCUUUGGUUAUCUAGCUGUAUGAGUGUGCUGGCCGUCAUAAAGCUAGAUAACCGAAAGUAAGAGCCGCUUCUAUCAGCAACGUAUGGAGCAUUGC


mirna_acc: MI0001883
mirna_id: dre-mir-9-3
description: Danio rerio miR-9-3 stem-loop
organism: dre
sequence:
UCAGGGGGUUGGUUUCUCUCUUUGGUUAUCUAGCUGUAUGAGUUAUAACACUGUCAUAAAGCUAGAUAACCGAAAGUAGAAAUAAUUCCCAAAAUCUUUGG


mirna_acc: MI0001889
mirna_id: dre-mir-10d
previous_mirna_id: dre-mir-10d-1
description: Danio rerio miR-10d stem-loop
organism: dre
sequence:
UGGAAGCUUUGUUCCGUCGUCUAUAUAUACCCUGUAGAACCGAAUGUGUGUUUACACAGCAAAUUCACAGAUUCGGUUUUAGGGGAGUAUAUGGACGAUGCAAAAACGUCUGCUUUCA


mirna_acc: MI0001892
mirna_id: dre-mir-15a-2
description: Danio rerio miR-15a-2 stem-loop
organism: dre
sequence:
GCCGAGGCUCUCUAGGUGAUGGUGUAGCAGCACAGAAUGGUUUGUGGUGAUACAGAGAUGCAGGCCAUGAUGUGCUGCAGCAUCAAUUCCUGGGACCUACGC


mirna_acc: MI0001893
mirna_id: dre-mir-15b
description: Danio rerio miR-15b stem-loop
organism: dre
sequence:
GUCUGUCGUCAUCUUUUUAUUUAGCCCUGAGUGCCCUGUAGCAGCACAUCAUGGUUUGUAAGUUAUAAGGGCAAAUUCCGAAUCAUGAUGUGCUGUCACUGGGAGCCUGGGAGUUUCUCCAUUAACAUGACAGC


mirna_acc: MI0001895
mirna_id: dre-mir-16b
description: Danio rerio miR-16b stem-loop
organism: dre
sequence:
CCUGAACUUGGCCGUGUGACAGACUGGCUGCCUGGCUGUAGCAGCACGUAAAUAUUGGAGUCAAAGCACUUGCGAAUCCUCCAGUAUUGACCGUGCUGCUGGAGUUAGGCGGGCCGUUUACCGUCUGCGGGGGCCUCGGG


mirna_acc: MI0001896
mirna_id: dre-mir-16c
description: Danio rerio miR-16c stem-loop
organism: dre
sequence:
GAGGUUGUGUGUGUGUGCGUGUGUUGUCUUGCUUUAGCAGCAUGUAAAUAUUGGAGUUACUCCUUGGCCAAUGCCUCCAAUAUUGCUCGUGCUGCUGAAGCAAGAAGUCACCAAGCAGCACAUGCACGUCAUCCUU


mirna_acc: MI0001897
mirna_id: dre-mir-17a-1
description: Danio rerio miR-17a-1 stem-loop
organism: dre
sequence:
GGACUUUCUUGAGUGGACUUGGUUGGUGUCAAUGUAUUGUCAAAGUGCUUACAGUGCAGGUAGUAUUAUGGAAUAUCUACUGCAGUGGAGGCACUUCUAGCAAUACACUUGACCAUUUUAACCUUCCUCCAGGCAUCC


mirna_acc: MI0001905
mirna_id: dre-mir-19c
description: Danio rerio miR-19c stem-loop
organism: dre
sequence:
UGGAAAAGCCCUGUUAUCUGGGGUGAGUUUUGCAGGAUUGCAUCCGGCUUUAUUACAACAUGCUGUGCAAAUCCAUGCAAAACUCGCUGCGCCAGGGACAAACCA


mirna_acc: MI0001907
mirna_id: dre-mir-20a
description: Danio rerio miR-20a stem-loop
organism: dre
sequence:
UCUUAAAUAAAUCUCCUAAUGUUGCAGUUGUGUUAGAGUUUCAGCAGUGCUAAAGUGCUUAUAGUGCAGGUAGUAUUUCUGUCAUCUACUGCAGUGUGAGCACUUGAAGUACUUCUAGCUUAAUGCGUCUGGGAUCCGAAGAUUUCUGCUAGA


mirna_acc: MI0001908
mirna_id: dre-mir-21-1
description: Danio rerio miR-21-1 stem-loop
organism: dre
sequence:
UUAUGUGUCUUUAUUGGCGUGGAUAUAAGUCUUUCCCAGUGUGUCAGAUAGCUUAUCAGACUGGUGUUGGCUGUUACAUUCGCCCGGCGACAACAGUCUGUAGGCUGUCUGACAUUUUGGGCAUUUUCUUCUCCGAUUAAAAAUAUGA


mirna_acc: MI0001909
mirna_id: dre-mir-21-2
description: Danio rerio miR-21-2 stem-loop
organism: dre
sequence:
AGACAGACAGUAAAAGUGUCCCUUUCUGUCAUGUAGCUUAUCAGACUGGUGUUGGCUUUGAGUUUUUGGCAACAGCAGUCUAAUAGGCUGUCUGACAUUUUGGGCUUAUUCGACGUACGGUUUGUUU


mirna_acc: MI0001920
mirna_id: dre-mir-24-3
description: Danio rerio miR-24-3 stem-loop
organism: dre
sequence:
GCUGAACGGGAGUCAUAUGAGAGAUAGAUGGAGCUGGCCUCCCGUGCCUACUGAGCUGAUUACAGUACUGUGCAAACACUGGCUCAGUUCAGCAGGAACAGGAGUCUGGUCCACAAACUCCACCAAACACUGCUGCUUCAGC


mirna_acc: MI0001925
mirna_id: dre-mir-26a-2
previous_mirna_id: dre-mir-26a-3
description: Danio rerio miR-26a-2 stem-loop
organism: dre
sequence:
GUGUGGACUUGAGUGCUGGAAGUGGUUGUUCCCUUGUUCAAGUAAUCCAGGAUAGGCUGUCUGUCCUGGAGGCCUAUUCAUGAUUACUUGCACUAGGUGGCAGCCGUUGCCCUUCAUGGAACUCAUGC


mirna_acc: MI0001926
mirna_id: dre-mir-26a-3
previous_mirna_id: dre-mir-26a-4
description: Danio rerio miR-26a-3 stem-loop
organism: dre
sequence:
CUAAGCUGAUACUGAGUCAGUGUGUGGCUGCAACCUGGUUCAAGUAAUCCAGGAUAGGCUUUGUGGACUAGGGUUGGCCUGUUCUUGGUUACUUGCACUGGGUUGCAGCUACUAAACAACUAAGAAGAUCAGAAGAG


mirna_acc: MI0001928
mirna_id: dre-mir-27a
description: Danio rerio miR-27a stem-loop
organism: dre
sequence:
UCUGGAUAUGAUGUCUGCUGAAGUUUCGUGAGGUGCAGGACUUAGCUCACUCUGUGAACAGAUCUCGGAUAUCCUAUGUUCACAGUGGCUAAGUUCCGCUCCUCUGAGGCCCACACUCGAAAUCAGCCAGG


mirna_acc: MI0001932
mirna_id: dre-mir-27e
description: Danio rerio miR-27e stem-loop
organism: dre
sequence:
GUCAUCACUCGCUCACGGCGCAGAGCUUAGCUAAUCGGUGAGCAUUGAUCCCUUAAGAAAACUGUUCACAGUGGCUAAGUUCAGUGUCUGGAGUGAACGGGAUGAC


mirna_acc: MI0001938
mirna_id: dre-mir-29a
previous_mirna_id: dre-mir-29a-1
description: Danio rerio miR-29a stem-loop
organism: dre
sequence:
UGAAGACCCUCAUCUCUCUCUCUCUCUCCCCACCAAACGAUGACUGAUUUCCUUUGGUGCUUAGAGUCCCAUCUGUCAUCUAGCACCAUUUGAAAUCGGUUAUAAUGACUGGGGAUCAAUUCUUCA


mirna_acc: MI0001946
mirna_id: dre-mir-30d
previous_mirna_id: dre-mir-30d-1
description: Danio rerio miR-30d stem-loop
organism: dre
sequence:
GUGCUGUAUAUGGGUAUAACUGGUUGUUCAUGCCUGUAAACAUCCCCGACUGGAAGCUGUGCUACGCGGAAAACGAGCUUUCAGUUGGAUGUUUGCUGUCAUCGUCCAGUUCUGUCGCCUUGUAUUAC


mirna_acc: MI0001955
mirna_id: dre-mir-96
description: Danio rerio miR-96 stem-loop
organism: dre
sequence:
GCUGGGCGCUCUUCUUUGCCUGUUUUGGCACUAGCACAUUUUUGCUUUUUUAUAUAUACCUUGAGCAAUUAUGUGUAGUGCCAAUAUGGGACAAGACAGACAUGCUACUUAAAAAAAAAAUCAGC


mirna_acc: MI0001961
mirna_id: dre-mir-101b
description: Danio rerio miR-101b stem-loop
organism: dre
sequence:
GCUCCUCCGUCAUGAAUUGUCCAUUUUCAGUUAUCAUGGUACCGGUGCUGUGUGCCUGUCAAGUACAGUACUAUGAUAACUGAAGAUUGACGGUGCCAAACAUCAGUGGAGU


mirna_acc: MI0001968
mirna_id: dre-mir-124-3
description: Danio rerio miR-124-3 stem-loop
organism: dre
sequence:
GGCUCUGUGGGAUUUCAGACUCUGGCUUUCCGUGUUCACAGCGGACCUUGAUUUAAUGUCUUACAAUUAAGGCACGCGGUGAAUGCCAAGAGCGGAGCCUUUUAACAUCAGCAGGCC


mirna_acc: MI0001970
mirna_id: dre-mir-124-5
description: Danio rerio miR-124-5 stem-loop
organism: dre
sequence:
GGGUUUUGCUCGUGCGUUCUUUUUGAGUUCUCGCUCUGCGUGUUCACAGCGGACCUUGAUUUAAUGUCCAUACAAUUAAGGCACGCGGUGAAUGCCAAGAGAAGAAUCUCUCCAGCAACGAGUUUGCGC


mirna_acc: MI0001971
mirna_id: dre-mir-124-6
description: Danio rerio miR-124-6 stem-loop
organism: dre
sequence:
GGGUGGUGACACAGGCCCGCCACUCUGCGUGUUCACGGCGGACCUUGAUUUAAUAUCCAUACAAUUAAGGCACGCGGUGAAUGCCAAGAGAGGGGUCUUAAAACGACAAACCC


mirna_acc: MI0001973
mirna_id: dre-mir-125a-2
description: Danio rerio miR-125a-2 stem-loop
organism: dre
sequence:
GAUCAGUCCAAAUCGAUGUAUGUCUGUGUCCCUGAGACCCUUAACCUGUGAUGUCUUCCAAGGUCACAGGUGAGGUCCUUGGGAACACGGCUGUAUAUGAUGACGUC


mirna_acc: MI0001975
mirna_id: dre-mir-125b-1
description: Danio rerio miR-125b-1 stem-loop
organism: dre
sequence:
UUCUGUUGCAGGUUGGCGGUUGGUCUGCAAAUGUGCCUCUCACAAUCCCUGAGACCCUAACUUGUGACGUUUUCCUGUUAUGUGCACGGGUUAGGUUCUUGGGAGCUGAGAGGGGUGCUCUGUCAUCAGCCCGCCGGCGUCGGAA


mirna_acc: MI0001977
mirna_id: dre-mir-125b-3
description: Danio rerio miR-125b-3 stem-loop
organism: dre
sequence:
CCCGUGCGGCCACCGCUGCACUCCUCCUGGUCCCUGAGACCCUAACUUGUGAGCUUUGUGUGCUAAAAAUCACAGGUUAAGCUCUUGGGACCUGGGCAGAGGGCAAAAGCACUGG


mirna_acc: MI0001979
mirna_id: dre-mir-126a
previous_mirna_id: dre-mir-126
description: Danio rerio miR-126a stem-loop
organism: dre
sequence:
GAGCCAUUUUAACUGCUUCACAGUCCAUUAUUACUUUUGGUACGCGCUAGGCCAGACUCAAACUCGUACCGUGAGUAAUAAUGCACUGUGGCAGUGGGUUU


mirna_acc: MI0001981
mirna_id: dre-mir-128-2
description: Danio rerio miR-128-2 stem-loop
organism: dre
sequence:
UCUGCUCAUGGGUCUGUCAGUAGUAGGACAGGGGGCCGUUUCUACUGUCAGAGAUGCUGCCACUCGUCUCACAGUGAACCGGUCUCUUUUCCUGCUAUUCACUUCUGCAAUAAUAUGAGCAGA


mirna_acc: MI0001987
mirna_id: dre-mir-130c-1
description: Danio rerio miR-130c-1 stem-loop
organism: dre
sequence:
GGGAGAGGUCUGUACGGUGAUAUUGACCAUGUUUUGUCCAUUGCCCUUUUUCUGUUGUACUACUGGCCAAUCAGAAGAGCAGUGCAAUAUUAAAAGGGCAUUGGCUGAUAGAACAGAGUCCUUCACCUCUCACCCUCUCCU


mirna_acc: MI0001991
mirna_id: dre-mir-132-2
previous_mirna_id: dre-mir-132-3
description: Danio rerio miR-132-2 stem-loop
organism: dre
sequence:
UCCCUUCCUCUGCUGUCUCCAUGCUGACCGUGGCUUUAGAUUGUUACUGUAGCGUUGGCACGUGGUAACAGUCUACAGCCAUGGUCGCCAAGGGGCAGGUGUUACAGCGACUACUGGGA


mirna_acc: MI0001997
mirna_id: dre-mir-135c-2
previous_mirna_id: dre-mir-135-2
description: Danio rerio miR-135c-2 stem-loop
organism: dre
sequence:
UGCAGUCUAAAGCAACUCAAAACACUACUGUGCUUUAUGGCUUUCUAUUCCUAUGUGAUUUUGAUAUGAUGUAUCAUGUAGGGUUCAAAGCCAUUAGGUACAGAGUGGCUUAUCAGCAGUGGAUGUA


mirna_acc: MI0002001
mirna_id: dre-mir-137-2
description: Danio rerio miR-137-2 stem-loop
organism: dre
sequence:
GUUCUGUUGUUUCCCUCUAUAAAGGACUCUCUUCGGUGACGGGUAUUCUUGGGUGGAUAAUACGGCUCUCGUUGUUAUUGCUUAAGAAUACGCGUAGUCGAGGAGAGUCAUGUCGGCGGCGAGAGAGC


mirna_acc: MI0002003
mirna_id: dre-mir-140
description: Danio rerio miR-140 stem-loop
organism: dre
sequence:
GUGUUUGUCUCCUGUGUCCCGUCAGUGGUUUUACCCUAUGGUAGGUUACGUCAUGCUGUUCUACCACAGGGUAGAACCACGGACGGGAUGUCUGGAGGUGUCUGC


mirna_acc: MI0002007
mirna_id: dre-mir-143-1
description: Danio rerio miR-143-1 stem-loop
sequence: GAUCUACAGUCGUCUGGCCCGCGGUGCAGUGCUGCAUCUCUGGUCAACUGGGAGUCUGAGAUGAAGCACUGUAGCUCGGGAGGACAACACUGUCAGCUC
organism: dre
comment:
The cloned mature miR-143 sequence always appears to be 22nt in length, modified by the addition of a 3' U residue not found in the genomic sequence [1]. 


mirna_acc: MI0002010
mirna_id: dre-mir-145
previous_mirna_id: dre-mir-145-1
description: Danio rerio miR-145 stem-loop
organism: dre
sequence:
UCAGUCUUCAUCAUUUCCUCAUCCCCGGGGUCCAGUUUUCCCAGGAAUCCCUUGGGCAAUCGAAAGGGGGAUUCCUGGAAAUACUGUUCUUGGGGUUGGGGGUGGACUACUGA


mirna_acc: MI0002012
mirna_id: dre-mir-146a
description: Danio rerio miR-146a stem-loop
organism: dre
sequence:
GAGUUUGUUUUGAGCACUUUUCCCUGAGAACUGAAUUCCAUAGAUGGUGUUCAUGAAAAGUUCAUCUAUGGGCUCAGUUCUUCUGGCAAUCUGUUUAAUGUCUGCUACAAAUUC


mirna_acc: MI0002019
mirna_id: dre-mir-153b
previous_mirna_id: dre-mir-153b-1
description: Danio rerio miR-153b stem-loop
organism: dre
sequence:
GAGCGAUGGAGCGCGGUAGCGAGGUAUUGCACAGCUGUCUGUGUCAUUUUUGUGGUUUGCAGCUAGUAGUCUGGUUCCAGUUGCAUAGUCACAAAAAUGAGCACAGACAGAUGUGACUGCAGCAACGCUGAUGAAACGCUCCAUCGCC


mirna_acc: MI0002022
mirna_id: dre-mir-153c
description: Danio rerio miR-153c stem-loop
organism: dre
sequence:
GAUGGAGAUCAGUAGGUCCCUGGACGUAGCACACCUCCCAGUGUCAUUUUUGUGAUUUGCAGCUAGUAGUCUGGGUCCAGUUGCAUAGUCACAAAAAUGAUCAUUGGUAGGUGUGAGUGCAGCAGGAGUGAGGCUUACCGGAUCCUCCAUC


mirna_acc: MI0002027
mirna_id: dre-mir-190a
previous_mirna_id: dre-mir-190
description: Danio rerio miR-190 stem-loop
organism: dre
sequence:
UCUGGAGGUGAGGUAGACCUGGAAGCCUUUCUGCAGGCCUCUGUUUGAUAUGUUUGAUAUAUUAGGUUGUUAUUCUGUCCAACUAUAUAUCAAACAUAUUCCUACAGUGUCCUGCUCUGUCUCCAG


mirna_acc: MI0002028
mirna_id: dre-mir-462
description: Danio rerio miR-462 stem-loop
organism: dre
sequence:
GUCUGGAUGGUAACGGAACCCAUAAUGCAGCUGUUUGGUUGAUUGAUUGACAGCUGUCUGUGGAUUCCGUGCCCCUCCUUUCUUGCAGGAGCUCAUUGAGAU


mirna_acc: MI0002042
mirna_id: dre-mir-204-2
description: Danio rerio miR-204-2 stem-loop
organism: dre
sequence:
GUGUUGCUCUAGUGACCAGUUUGUGACCUCCUGGGUUUCCCUUUGUCAUCCUAUGCCUGCAGUUCCUGAUGAGGCUGGGACAGCAAAGGGAGGUUCAGAUGUCGACCUGUACUACAGUCAAUAC


mirna_acc: MI0002046
mirna_id: dre-mir-206-2
description: Danio rerio miR-206-2 stem-loop
organism: dre
sequence:
GAGUUGGCUGUUGCUUAUUGAGACGACAUACUUCCUUAUAUCCCCAUAUUCAGAAUUAAUCUAUGGAAUGUAAGGAAGUGUGUGGCUUCAGUGAGAUCUCAUCAUCAUC


mirna_acc: MI0002054
mirna_id: dre-mir-219-3
description: Danio rerio miR-219-3 stem-loop
organism: dre
sequence:
CUUCUCUUUUAAGUUCAUCUGUCUGGUUUGAUACUGACGGUCAGGUGCUGAUUGUCCAAACGCAAUUCUUGUGCUUGUGUGAAACAGGAGUUGUGGAUGGACAUCACGCUCCUGUCUGGUCCUCACAUCUACAGGAUGGGCCAAGUAAAG


mirna_acc: MI0002064
mirna_id: dre-mir-338-2
description: Danio rerio miR-338-2 stem-loop
organism: dre
sequence:
GUGUGUGUGUGUGUUUCUGGUGCCUGCUGAGAACAAUAUCCUGAUGCUGAAUGAGUGUGUUGAAGGAAACUCCAGCAUCAGUGAUUUUGUUGCCAGAGGAGCACUUUGGGCAUCCUGUGUAUAU


mirna_acc: MI0002067
mirna_id: dre-mir-363
description: Danio rerio miR-363 stem-loop
organism: dre
sequence:
UAAAUGCAAAUAUUUGUCUUGCUGUUUUCGGGUGGAUGACUCUGCAAUUUUAUUAGUGAUGGAAAAACUUCAAUAAAAAUUGCACGGUAUCCAUCUGUAAUCCGCUGGAUUCCAUUACCUGCGUUUG


mirna_acc: MI0002074
mirna_id: dre-mir-454a
previous_mirna_id: dre-mir-454a-1
description: Danio rerio miR-454a stem-loop
organism: dre
sequence:
UUGCAGGUCGUUUAAGAAUUAAUCCUAAUUCUUGGGACCCUAUCAGUAUUGCCUCUGCUGUCCACUGUGUUCAGAGUAGUGCAAUAUUGCUAAUAGGGUUUUAGGUUUUAGGUUGUACCUUCAG


mirna_acc: MI0002076
mirna_id: dre-mir-454b
description: Danio rerio miR-454b stem-loop
organism: dre
sequence:
GAUAAAUGCAUCUUGCAGGCGAGACCCUAUCAAUAUUGCCUCUGCUUUUCUCACUGUUUAUGGAGUAGUGCAAUAUUGCUUAUAGGGUCUUGACUUUAAGGCUAAUCUGCAAUAUC


mirna_acc: MI0002077
mirna_id: dre-mir-455a
previous_mirna_id: dre-mir-455-1;dre-mir-455
description: Danio rerio miR-455 stem-loop
sequence: UCCCUGGUGUGAGGGUAUGUGCCCUUGGACUACAUCGUGGAAGCCAGCACCAUGCAGUCCAUGGGCAUAUACACUUGCCUCAAGGCCUAGAUCUUC
organism: dre
comment:
The mir-455 precursor was predicted computationally and a mature product verified in human by Northern blot [2].  The precise sequence termini of the mature form were derived by cloning from human and rat samples (Landgraf and Tuschl, unpublished). 


mirna_acc: MI0002184
mirna_id: ptc-MIR156a
description: Populus trichocarpa miR156a stem-loop
organism: ptc
sequence:
AAAGAAAGACUGACAGAAGAGAGUGAGCACACACGAAAGUAUAUGGUAUGAAGGCAUUCCAUUGCAGGGUGUGUGCUCACAUCUCUUCUGUCAGCUUCCAC


mirna_acc: MI0002185
mirna_id: ptc-MIR156b
description: Populus trichocarpa miR156b stem-loop
organism: ptc
sequence:
GUAAGGGAGGUGACAGAAGAGAGUGAGCACACAGGGUACUUUCUUGCAUGACAUCCAUGCUUGAAACUUUGCGUGCUCACUCUCUAUCUGUCACCCCACCA


mirna_acc: MI0002186
mirna_id: ptc-MIR156c
description: Populus trichocarpa miR156c stem-loop
organism: ptc
sequence:
CAUUAGAAACUGACAGAAGAGAGUGAGCACACAGAGGCAUAUUUGUAUAAAUCUAUACCAUUGCUUUUGCGUGCUCACUUCUCAUUCUGUCAGCUUCCAG


mirna_acc: MI0002187
mirna_id: ptc-MIR156d
description: Populus trichocarpa miR156d stem-loop
organism: ptc
sequence:
GUAAGUGAGUUGACAGAAGAGAGUGAGCACACAGGGUACUUUCUUGCAUGACGUUCAUGCUUGAAGCUUUGCGUGCCCACCCUCUAUCUGUCACCCCAUCA


mirna_acc: MI0002188
mirna_id: ptc-MIR156e
description: Populus trichocarpa miR156e stem-loop
organism: ptc
sequence:
CAUUAGAAAUUGACAGAAGAGAGUGAGCACACAGAGGCAUAUUUGUAUAAAAUUAUACCAUUGCUUUUGCGUGCUCAUUUCUCUUUCUGUCACUUCCAGA


mirna_acc: MI0002189
mirna_id: ptc-MIR156f
description: Populus trichocarpa miR156f stem-loop
organism: ptc
sequence:
AGAGAAAGACUGACAGAAGAGAGUGAGCACACACGAAAGCUAAUUGUAUGAAAGCAUACCAUUGCAGGGUGUGUGCUCACUUCUCUUCUGUCAGCUUACAU


mirna_acc: MI0002190
mirna_id: ptc-MIR156g
description: Populus trichocarpa miR156g stem-loop
organism: ptc
sequence:
GGUGAUGUUGUUGACAGAAGAUAGAGAGCACAGAUGAUGAAAUGCAUGGAGCUUAAUUGCAUCUCACUCCUUUGUGCUCUCUAGUCUUCUGUCAUCACCUUCA


mirna_acc: MI0002191
mirna_id: ptc-MIR156h
description: Populus trichocarpa miR156h stem-loop
organism: ptc
sequence:
GGUGAUGCUGUUGACAGAAGAUAGAGAGCACUGACGAUGAAAUGCAUGGAGCUUAAUUGCAUCUCACUCCUUUGUGCUCUCUAGUCUUCUGUCAUCACCUUCA


mirna_acc: MI0002193
mirna_id: ptc-MIR156j
description: Populus trichocarpa miR156j stem-loop
organism: ptc
sequence:
GGUGAUGUUGUUGACAGAAGAUAGAGAGCACAGAUGAUGAUAUGCAAUGGACUCUGCAUCCCACUCCUUUGUGCUCUCUAUGCUUCUGUCAUCACUUUCA


mirna_acc: MI0002194
mirna_id: ptc-MIR156k
description: Populus trichocarpa miR156k stem-loop
organism: ptc
sequence:
UUAUGCAUGCUGACAGAAGAGAGGGAGCACAACCCUGUAAUAGCUAAAGAGAGUCUUUGCUUUUGUUGGACUGUGCUUUCUCUUCUUCUGUCACCAACCAA


mirna_acc: MI0002195
mirna_id: ptc-MIR159a
description: Populus trichocarpa miR159a stem-loop
organism: ptc
sequence:
GAUUAGGGAGUGGAGCUCCUUGAAGUCCAAUAGAGGUUCUUGCUGGGUAGAUUAAGCUGCUAAGCUAUGGAUCCACAGUCCUAUCUAUCAACUGAAGGAUAGGUUUGCGGCUUGCAUAUCUCAGGAGCUUUAUUGCCUAAUGUUAGAUCCCUUUUUGGAUUGAAGGGAGCUCUAAACCCAUAA


mirna_acc: MI0002196
mirna_id: ptc-MIR159b
description: Populus trichocarpa miR159b stem-loop
organism: ptc
sequence:
GAUUAUGGAGUGGAGCUCCUUGAAGUCCAAUAGAAGCUCCUGCUGGGUAGAUCGAGCUGCUGAGCUAUGAAUCCCACAGCCCUAUCACCAUCAGUCAUUUUGAUGGGCCUGCGGCUUGCAUAUCUCAGGAGCUUUAUUACCUAAUGUUAGAUCUUUUUUUGGAUUGAAGGGAGCUCUAAACCUUUGA


mirna_acc: MI0002197
mirna_id: ptc-MIR159c
description: Populus trichocarpa miR159c stem-loop
organism: ptc
sequence:
GAUUAGGGAGUGGAGCUCCUUGAAGUCCAAUAGAGGUUCUUGCUGGGUAGAUUAAGCUGCUAAGCUAUGGAUCCACAGUCCUAUCUAUCAACCGAAGGAUAGGUUUGCGGCUUGCAUAUCUCAGGAGCUUUAUUGCCUAAUGUUAGAUCCCUUUUUGGAUUGAAGGGAGCUCUAAACCCAUAA


mirna_acc: MI0002198
mirna_id: ptc-MIR159d
description: Populus trichocarpa miR159d stem-loop
organism: ptc
sequence:
UUGUAAAUUUGGGAGCUUUCUUUGGUUCAAAAUGAGGAAAGAAAGUGGGUAUACUCGUCUGCUUGUUCAUGGAUACCUCUGGGUUGCGCAGGAUAUAUUAGUUAGGGCUACAGCUUAAGGGUUUGCAUGGCCAAGGAGACGUUGCCUGCCUUCUCCUUUCGUUUCUUGGAUUGAAGGGAGCUCCUACAUGUAUC


mirna_acc: MI0002199
mirna_id: ptc-MIR159e
description: Populus trichocarpa miR159e stem-loop
organism: ptc
sequence:
ACCAUUAAAUAGGAGCUUGCUCACUCCAGAUCUGAAAGGAGGUGAUAGGAAACCACUUCUGCUACUUCAUGAAUACCCGUGGGUGUGCGCGUAGCCAUGGUGAGCUGCGCAGGCUAAGGGUCUGCAUGUGCUAGGAGAUGUGGUUGCCUUGAUCUUUUUGGUCUUGGGGUGAAGGGAGCUCCUAUAGUCCCA


mirna_acc: MI0002200
mirna_id: ptc-MIR159f
description: Populus trichocarpa miR159f stem-loop
organism: ptc
sequence:


mirna_acc: MI0002201
mirna_id: ptc-MIR160a
description: Populus trichocarpa miR160a stem-loop
organism: ptc
sequence:
ACAUGGGUUAUGCCUGGCUCCCUGUAUGCCACAAGCAAAGACCAAUCUUUUGUUUUAGAUUGGCUGUUGCCGGUGGCGUGCGAGGAGCCAAGCAUACUCUCU


mirna_acc: MI0002204
mirna_id: ptc-MIR160d
description: Populus trichocarpa miR160d stem-loop
organism: ptc
sequence:
AAAUGGGUUAUGCCUGGCUCCCUGUAUGCCACAGCAAAGACCAAUCUCUUCUGUCUUAGAUUGGCUGCUGCCGGUGGCGUGCGAGGAGCCAAGCAUACUCUCU


mirna_acc: MI0002205
mirna_id: ptc-MIR160e
description: Populus trichocarpa miR160e stem-loop
organism: ptc
sequence:
AAGAAUGGCCUGCCUGGCUCCCUGAAUGCCAUCUAGGAAGCUUGUCAAAGAGUGUUGGCAACCUUUCUAUUUGGCAUGAGGGGAGUCGAGCAGGCCAAUU


mirna_acc: MI0002206
mirna_id: ptc-MIR160f
description: Populus trichocarpa miR160f stem-loop
organism: ptc
sequence:
AAGAAUGGUCUGCCUGGCUCCCUGAAUGCCAUCUAGGAAGCUUGUCAAAGAGUGUUGGCAACCUCUCUAACUGGCAUGAGGGGAGUCACGCAGGCCCAAC


mirna_acc: MI0002209
mirna_id: ptc-MIR162a
description: Populus trichocarpa miR162a stem-loop
organism: ptc
sequence:
UGGGAAGACACUGGAGGCAGCGGUUCAUCGAUCUCUUCCUGGCCAAUUUUUUGUUUAGCACGAAAAACAUGAACCGAUCGAUAAACCUCUGCAUCCAGCGCUUCCUU


mirna_acc: MI0002210
mirna_id: ptc-MIR162b
description: Populus trichocarpa miR162b stem-loop
organism: ptc
sequence:
UGAGAAGACACUGGAGGCAGCGGUUCAUCGAUCUUUUCCUGAAGAUUUUUUUGUUUUACACGAACAACACGAACCGAUCGAUAAACCUCUGCAUCCAGUGCUUCCCU


mirna_acc: MI0002213
mirna_id: ptc-MIR164b
description: Populus trichocarpa miR164b stem-loop
organism: ptc
sequence:
GUGAGCAAGAUGGAGAAGCAGGGCACGUGCACUACUAACUCAUGCACACAGAGAGGGAGACGCAUUUCUUGCUGGAGUUACGAGUUACGACUCUUACCUACUAUUGAUUUUGUUAGCUCCAGUGAGUUAGUUAUUCAUGUGCCUGUCUUCCUCAUCAUGAUC


mirna_acc: MI0002216
mirna_id: ptc-MIR164e
description: Populus trichocarpa miR164e stem-loop
organism: ptc
sequence:
GUGAGCAAGAUGGAGAAGCAGGGCACGUGCAUUACUAACUCAUGCACACAGAGUGAGAGAGACAUUUCUUGCUGGAGUUAUGACUCUUACCUACUAUAGAUUGUGUUGGCUUCAGCGAGUUAGUUCUUCAUGUGCCUGUCUUCCCCAUCAUGAUC


mirna_acc: MI0002218
mirna_id: ptc-MIR166a
description: Populus trichocarpa miR166a stem-loop
organism: ptc
sequence:
UUUCUUUUGAGGGGAAUGUUGUCUGGCUCGAGGUCACUAAUGGGAUCUAUGAUUUUAUCUCAAUUGAUUGAUUUUCUUUUAAAUUCUAGUAAAUUGAAUUGAGAGAUAUCAUGAUCAACUUAUAUUUAAUGAUGUCGGACCAGGCUUCAUUCCCCCCAAUUGUU


mirna_acc: MI0002219
mirna_id: ptc-MIR166b
description: Populus trichocarpa miR166b stem-loop
organism: ptc
sequence:
UAACUGUUGAGGGGAUUGCUGUCUGGUUCGAUGUCAUUCAUGUGAAGCUUUAACAUUAAUGUAGUAUUGAGUGAUUUCGGACCAGGCUUCAUUCCCCCCAACUAUA


mirna_acc: MI0002220
mirna_id: ptc-MIR166c
description: Populus trichocarpa miR166c stem-loop
organism: ptc
sequence:
CUUUUUUUGAGGGGAAUGUUGUCUGGCUCGAGGACUCUUUCUUGAUCAGUCUGAUCAAGUGUUCUAUCUUUAGAUCUAAUAUCUUAGAUCAUGUGUUAGGGUCGUCGGACCAGGCUUCAUUCCCCCCAAUUAUU


mirna_acc: MI0002221
mirna_id: ptc-MIR166d
description: Populus trichocarpa miR166d stem-loop
organism: ptc
sequence:
CGUGAGUUGAGGGGAAUGUUGGCUGGCUCGAAGCUUAAGCAAAGAGUUUUCUCUCAAGAAACAACUGUUAAGGCUUCGGACCAGGCUUCAUUCCCCUCAACCAAU


mirna_acc: MI0002222
mirna_id: ptc-MIR166e
description: Populus trichocarpa miR166e stem-loop
organism: ptc
sequence:
UAACUGUUGAGGGGAUUGUCGUCUGGUUCGAUGUCAUUCAUGAGAAGCUCAAACAUAAACGUAAUAUUGAAUGAUUUCGGACCAGGCUUCAUUCCCCCCAACAAUG


mirna_acc: MI0002223
mirna_id: ptc-MIR166f
description: Populus trichocarpa miR166f stem-loop
organism: ptc
sequence:
GGUGUGUUGAGGGGAAUGUUGGCUGGCUCGAAGCUUAAGCAAAGAGUUUCCUAACAUGAAACAACUGUUAAGGCUUCGGACCAGGCUUCAUUCCCCUCAAACAUA


mirna_acc: MI0002224
mirna_id: ptc-MIR166g
description: Populus trichocarpa miR166g stem-loop
organism: ptc
sequence:
ACACAGUUGAGGGGAAUGCUGUCUGGUUCGAGACCAUUCACCUGAAGCGCACGCAUUCAUCUUUUGAGUGAUCUCGGACCAGGCUUCAUUCCCCCCAACUCAA


mirna_acc: MI0002225
mirna_id: ptc-MIR166h
description: Populus trichocarpa miR166h stem-loop
organism: ptc
sequence:
ACACAGUUGAGGGGAAUGCUGUCUGAUUCGAGACCAUUCACUUUAAGCACACAUUCAUCUUUCGAAUGAUCUCGGACCAGGCUUCAUUCCCCCCAACUCAA


mirna_acc: MI0002226
mirna_id: ptc-MIR166i
description: Populus trichocarpa miR166i stem-loop
organism: ptc
sequence:
UGUCUUUUGAGGGGAAUGUUGUUUGGUUCAAGGCCUGGCCACCCCAUGUCUUGGAAUUUAAAAUAUCAUGUCCUCGGACCAGGCUUCAUUCCCCUCAAUUACU


mirna_acc: MI0002227
mirna_id: ptc-MIR166j
description: Populus trichocarpa miR166j stem-loop
organism: ptc
sequence:
UCUUUUUUGAGGGGAAUGUUGUCUGGCUCGAGGACUUUUUGUUCAUCAAUCUAAUCGAACUUUCUACCUGUAGAUCUAGUAUCUUAUUUAAGAUUGAUCACGUAUUAGGGUUGUCGGACCAGGCUUCAUUCCCCCCAAUCAUU


mirna_acc: MI0002230
mirna_id: ptc-MIR166m
description: Populus trichocarpa miR166m stem-loop
organism: ptc
sequence:
UGAGGAUGUGGGGGAAUGUCGUCUGACUCGAGACAACAGGUAAACUGAAGGAAUGGCCGGAGUUUAAGAGUUCUCUCGGACCAGGCUUCAUUCCCCUCAUCCACA


mirna_acc: MI0002231
mirna_id: ptc-MIR166n
description: Populus trichocarpa miR166n stem-loop
organism: ptc
sequence:


mirna_acc: MI0002232
mirna_id: ptc-MIR166o
description: Populus trichocarpa miR166o stem-loop
organism: ptc
sequence:


mirna_acc: MI0002233
mirna_id: ptc-MIR166p
description: Populus trichocarpa miR166p stem-loop
organism: ptc
sequence:
UAAGGUUGAGAGGAACGCUGUCUGGGUCGAGGUCAUGGAGGCCAUGAUUAUACAUAAAUGGCAUUAUCUGAUGACAGCCCAGAUAAUCGAUGCACCUGUCUUGAACCUAAAUGAUUCUCGGACCAGGCUCCAUUCCUUCCAACCAU


mirna_acc: MI0002234
mirna_id: ptc-MIR166q
description: Populus trichocarpa miR166q stem-loop
organism: ptc
sequence:
UUAGGUUGAGAGGAAUGUUGUCUGGCUCGAGGUCAUUGAGGCCAUGAUUAUACAGACAUGGCAUUACCUGAUGACAGCCGAGAAAAUUCAAAGUCUGUGUGUAUCUUGUACCUCGAUGAUUCUCGGACCAGGCUUCAUUCCUUCCAACAAA


mirna_acc: MI0002238
mirna_id: ptc-MIR167d
description: Populus trichocarpa miR167d stem-loop
organism: ptc
sequence:
AGGGAAAAGGUGAAGCUGCCAGCAUGAUCUAUCUUUGGUUAGAGAAGGAUAGAAGCGAAAGAACUAACCCUAGCUAGGUCAUGCUCUGACAGCCUCACUCCUUCC


mirna_acc: MI0002243
mirna_id: ptc-MIR168a
description: Populus trichocarpa miR168a stem-loop
organism: ptc
sequence:
GGUCUCUGAUUCGCUUGGUGCAGGUCGGGAACUGAUUCGGCGAUUUGAUUGCCAGAUGGCUCGACAUGACUGGUUGUUGUGGAAAAAGAAAAGGAAGGAAACAGGAAAAAAAACAAAGAAUAGCGAAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAGG


mirna_acc: MI0002244
mirna_id: ptc-MIR168b
description: Populus trichocarpa miR168b stem-loop
organism: ptc
sequence:
GGUCUCUAAUUCGCUUGGUGCAGGUCGGGAACUGAUUCGGCGAUUUGAUUGCCAGAUGGCUAAACACGAUUGGCUGUGAGGCAAAUUAUAAAAAGAAAGAGAAUUGGAUCCCGCCUUGCAUCAACUGAAUCGGAGA


mirna_acc: MI0002245
mirna_id: ptc-MIR169a
description: Populus trichocarpa miR169a stem-loop
organism: ptc
sequence:
AAGUGGUAUGCAGCCAAGGAUGACUUGCCGACUUAACUGAUCUGUAUAAAUUAAUGCAUGUGUAGUCAAAAUUACUACUACUAUAUAUUAAUCUGAUCUGUGACCACAAAUUAACUAACUACUAGCUAGUAAUUAGUUGGCAAGUUGUCCAUGGCUACAUGCUGC


mirna_acc: MI0002246
mirna_id: ptc-MIR169aa
description: Populus trichocarpa miR169aa stem-loop
organism: ptc
sequence:
GUAGAGAUCGAGCCAAGAAUGACUUGUCGGCAGGCUAGCAAUUGCUACGUAUAGAGCAAUAUGUAUGCUAGAAUGAGUAUUCCGCCAGGUCGUUCUUGGCUCAACUUUG


mirna_acc: MI0002247
mirna_id: ptc-MIR169ab
description: Populus trichocarpa miR169ab stem-loop
organism: ptc
sequence:
CAUGUUUGGCAGCCAAGGAAGACUUGCCCGUCAUCGUCUUAGCUGGUUCCAGUGUAUUACUUAGCACCUUUUGUUUGGUUUUGGGGAAGCACCUUGACUAGCUGACA


mirna_acc: MI0002248
mirna_id: ptc-MIR169ac
description: Populus trichocarpa miR169ac stem-loop
organism: ptc
sequence:
UCUUGUUUGUAGCCAAGGACGACUUGCCCACAAUAUGUAUCGUGAGCGUUUCCAAUUUGCAACCUCAUACUUGGUUGUUUUGGGCAGUCUCCUUGGCUAUGCAGAU


mirna_acc: MI0002249
mirna_id: ptc-MIR169ad
description: Populus trichocarpa miR169ad stem-loop
organism: ptc
sequence:
GUUGUUCGGUAGCCAAGGACGACUUGCCCACACUAUGAGACAAGUGGUUAGAAUUAGCAACUUCUUAAUUGGUUAUGGGAAGUCUCCUUGGCUAUGCUGAC


mirna_acc: MI0002250
mirna_id: ptc-MIR169ae
description: Populus trichocarpa miR169ae stem-loop
organism: ptc
sequence:
CUUGUUUGGUAGCCAAGGACGACUUGCCCACCACCAUCUUAGUUGGGUCCAAUAUAUUACUGGGCACCUUCCAUUUGGUUUUGGGCAAGCACCUUGGCUAGCUGACA


mirna_acc: MI0002251
mirna_id: ptc-MIR169af
description: Populus trichocarpa miR169af stem-loop
organism: ptc
sequence:
CUUGUUUGGUAGCCAAGGACGACUUGCCCACCACCAUCUCAGUUGGGUCCAAUAUAUUACUGGGCACCUUCCAUUUGGUUUUGGGCAAGCACCUUGGCUAGUUGACA


mirna_acc: MI0002252
mirna_id: ptc-MIR169b
description: Populus trichocarpa miR169b stem-loop
organism: ptc
sequence:
AAGAUUGAUGCAGCCAAGGAUGACUUGCCGACGACUCGUUUUUGCUUCCAUCAAUAUACGCAUAAUUAAGAAGAGAUGAAUCCGUUGGCAGGUUGUUCUUGGCUACAUUUUUC


mirna_acc: MI0002253
mirna_id: ptc-MIR169c
description: Populus trichocarpa miR169c stem-loop
organism: ptc
sequence:
AAGUUUGAUGCAGCCAAGGAUGACUUGCCGACGACUCAAUUUUUGCUUCCAUAUGGUAGAAGAGAUGAAUAGGUUGGCAGGUUUUCCUUGGCUACAUUUUCC


mirna_acc: MI0002254
mirna_id: ptc-MIR169d
description: Populus trichocarpa miR169d stem-loop
organism: ptc
sequence:
GAGUCGAAUGCAGCCAAGGAUGACUUGCCGGCAUUUCCUCCUAAGUAGCGAGCCCGGCAAGGCUUCUAUUUGGCACGCCCGGCCGGCGGGUUGUCCUUGGCUAUAUUUGGU


mirna_acc: MI0002255
mirna_id: ptc-MIR169e
description: Populus trichocarpa miR169e stem-loop
organism: ptc
sequence:
UAUCGUGGCGCAGCCAAGGAUGACUUGCCGGCAAGCUCCUCACACGUAUUUUGUUUCGAGUUUCAUUGAUGGCAUUGCUAGAUAGAUAUAUAUGAUUUCGUAAUUCAAACUUUUGGGCCAUUGUCUGGUUGAAAUGAUCGGCAAGCUGUCCUUGGCUAUGUCUCUA


mirna_acc: MI0002256
mirna_id: ptc-MIR169f
description: Populus trichocarpa miR169f stem-loop
organism: ptc
sequence:


mirna_acc: MI0002257
mirna_id: ptc-MIR169g
description: Populus trichocarpa miR169g stem-loop
organism: ptc
sequence:
GAGUAGAAUGCAGCCAAGGAUGACUUGCCGGCAUUUCCUCCUAGGUAGCUAGCAAGCCUUCUAUUUGGCAUGCCUGUCCGGCAGGUUGUCCUUGGCUAAAUUUUGU


mirna_acc: MI0002258
mirna_id: ptc-MIR169h
description: Populus trichocarpa miR169h stem-loop
organism: ptc
sequence:
GAGUGUAAUUCAGCCAAGGAUGACUUGCCGGCAGCACGGGAUCUCAGAGCUUAAUAACUAGAAGAUCAAGGCUGUCAUUACUUUUCCGGCCGGCAAGUUGCCCUUGGCUACAUUGUAC


mirna_acc: MI0002259
mirna_id: ptc-MIR169i
description: Populus trichocarpa miR169i stem-loop
organism: ptc
sequence:
UCUUGUUUGGUAGCCAAGGAUGACUUGCCUGCUCCAUUGUAGGAGGUUUCCGAAAAAAUGCAGACAUGUAUAAUUUCGAAACCCCUGUUUCGUUUCAGGCAGUCUCCUUGGCUAACUUGACUG


mirna_acc: MI0002260
mirna_id: ptc-MIR169j
description: Populus trichocarpa miR169j stem-loop
organism: ptc
sequence:
UCUUGUUUGAUAGCCAAGGAUGACUUGCCUGCUACUUGCAAGAGUUUCUGCAAAGAGAUCAGAACCAAAUAUGCAUGGAAUUAUAUGUAAUGAAACUCUUGUUUGAUUGCCAGGCAGUCUCCUUGGCUAGCCUGACA


mirna_acc: MI0002261
mirna_id: ptc-MIR169k
description: Populus trichocarpa miR169k stem-loop
organism: ptc
sequence:


mirna_acc: MI0002262
mirna_id: ptc-MIR169l
description: Populus trichocarpa miR169l stem-loop
organism: ptc
sequence:
UCUUGUUUGAUAGCCAAGGAUGACUUGCCUGCUACAUACAAGAGAUCAUUAUGCAUAAAUAGAACGAAAUAUGUACAUGGUAUUAAUUAAUGCAGUGAAAACUCUUGUUUGGUUGCCAGGCAGUCUCCUUGGCUAAGCUGACA


mirna_acc: MI0002263
mirna_id: ptc-MIR169m
description: Populus trichocarpa miR169m stem-loop
organism: ptc
sequence:
UCUUGUUUGGUAGCCAAGGAUGACUUGCCUGCUCCCUUCAAGGAGGUUUCAUGAAAUGCAGACAUGAUCUCUCGAAACCCCUGUUGGGUUUCAGGCGGUCUCCUUGGCUAACUUGACAG


mirna_acc: MI0002264
mirna_id: ptc-MIR169n
description: Populus trichocarpa miR169n stem-loop
organism: ptc
sequence:
AGAGUGGAUUUGAGCCAAGGAUGACUUGCCGCAGAUGCAUGGUCCUUGCUGCUGAUCACAUACCAAGGGGGGUUUUGGGUGGCAAGCAUCCUUGGUUCUCCUUCGCU


mirna_acc: MI0002265
mirna_id: ptc-MIR169o
description: Populus trichocarpa miR169o stem-loop
organism: ptc
sequence:
CCUUGCGUGGAAGCCAAGGAUGACUUGCCUGAGAAUUUUAGGAAGGUUUCUAUAUGAAAGCUUUUUAUUAGUUUUGCAGGAAGUCAACCUUGGCUUUCCUAUAG


mirna_acc: MI0002266
mirna_id: ptc-MIR169p
description: Populus trichocarpa miR169p stem-loop
organism: ptc
sequence:
GGUGUAGGAGUUUUGCAUGAAGAGGUAGAGAGUAGAAUGCAGCCAAGGAUGACUUGCCGGCAUUUCCUCCCAGCUAGCUAGCAAGCCUUCUAUUUGGCAUGCCUGGCCGGCAGGAUGUCCUUGGCUAUAUUUUGUUCUCUUCUUCUCAUGUGAGACUCCAGGCC


mirna_acc: MI0002267
mirna_id: ptc-MIR169q
description: Populus trichocarpa miR169q stem-loop
organism: ptc
sequence:
UCUUGUUAGUUAGCCAAGGACGACUUGCCUGUUCCUAGCAAUUUGGGAUUUGCCCUGGACUAAGAGGCAGGACCCUCAUUCCGGGUUUCAGGCAGUCUCCUUGGCUAGGUUGACA


mirna_acc: MI0002268
mirna_id: ptc-MIR169r
description: Populus trichocarpa miR169r stem-loop
organism: ptc
sequence:
GAGGGUUUGGUAGCCAAGGAUGACUUGCCUAUUUCCUCCAUAAGGCUUUAAAAAGCAUGAAAUGUGGUUUAGAGCUCAAUUGAAGGGUUCAUAGGCAGUCUACUUUGGUUAUCCUAGCU


mirna_acc: MI0002269
mirna_id: ptc-MIR169s
description: Populus trichocarpa miR169s stem-loop
organism: ptc
sequence:
AGAGUGUGAUUCAGCCAAGGAUGACUUGCCGGCAGCAGGUAAGAGCAAAGCUCCGUUUUUGGAAGUUCAAGGAUAUCUUAACUUUUCCGGCCGGCAAGCUGUCCUUGGCUACAUUGUACU


mirna_acc: MI0002270
mirna_id: ptc-MIR169t
description: Populus trichocarpa miR169t stem-loop
organism: ptc
sequence:
CUAGAGUCCGAGCCAAGAAUGACUUGCCGGCAGGCUAGCAUUUGCUAGCUACAGGGCAAGAUGUAUGCUAAAGUGACAUUCCGCCAGGUUGUUCUUGGCUCUACUUUG


mirna_acc: MI0002271
mirna_id: ptc-MIR169u
description: Populus trichocarpa miR169u stem-loop
organism: ptc
sequence:
GAGGGUUGGGUAGCCAAGGACGACUUGCCUAUUUCCUCCAUGGGGUCCUGAAAAGAAUGAAAUACUGUCGUUCAGAGCUCAUUGGUAGGGUUCAUAGGCAGUCUCCUUUGGCUAUCCUAACU


mirna_acc: MI0002272
mirna_id: ptc-MIR169v
description: Populus trichocarpa miR169v stem-loop
organism: ptc
sequence:
CGUGUUUGGUAGCCAAGGAUGACUUGCCCACUCCAUUGAAAGAGUUUUUCAAGCAUAUGGUAGUGUAGAACUUUUCUUUGGUUCUGGGCAGUCAUCUUGGCUAUGCUGAC


mirna_acc: MI0002273
mirna_id: ptc-MIR169w
description: Populus trichocarpa miR169w stem-loop
organism: ptc
sequence:
CGUGUUUGGUAGCCAAGGAUGACUUGCCCACUCUAUGGAAAGAGUUCUCAAGCACACGGCAGAGAGGACCCUUACUUCGGCUCUGGGCAGUCACCUUGGCUAUGCUGAC


mirna_acc: MI0002274
mirna_id: ptc-MIR169x
description: Populus trichocarpa miR169x stem-loop
organism: ptc
sequence:
UGCUGUUUUCUAGCCAAGGAUGACUUGCUCGUUAGCCCUUGAAAGAUGUUUCAAAUUUAGGCUGCAUAUGCUCAGAACCUUUUUCUGGCUUCAGGCAAUCAUCUUGGCUAAAUGACAG


mirna_acc: MI0002275
mirna_id: ptc-MIR169y
description: Populus trichocarpa miR169y stem-loop
organism: ptc
sequence:
UCUUGUUUAGUAGCCAUGGAUGAAUUGCCUGCUUCCAAAAUGAGGUGUCAAGCCGAGAUAAACAUACAAGUUUGAUCCCUCAUUGGGGUUCCCAGGCAGUCAUCAGCUUGGCUAACUUGACAG


mirna_acc: MI0002276
mirna_id: ptc-MIR169z
description: Populus trichocarpa miR169z stem-loop
organism: ptc
sequence:
UAGUAGAAUGCAGCCAAGAAUGAUUUGCCGGCGCCGGCCAGCACUUGUUGCAAAGCAACUAAGCAAGGGCUUCAAAUGUUUUUGGCACCCCGGCAAGUUGUUCUUGGCUACAUUUGGA


mirna_acc: MI0002277
mirna_id: ptc-MIR171a
description: Populus trichocarpa miR171a stem-loop
organism: ptc
sequence:
UCAGAGAAAACGGGAUAUUGGUACGGUUCAAUCAGAAAGUAAUGCUCCCAAAAGUAUAGAGUACUAUUGUUUGAUUGAGCCGUGCCAAUAUCACGUACACUCAU


mirna_acc: MI0002278
mirna_id: ptc-MIR171b
description: Populus trichocarpa miR171b stem-loop
organism: ptc
sequence:
UUAUAUAUAACGAGAUAUUGGUGCGGUUCAAUCAGAUAGUAAUGCUCCAUAAGCAUAGAGCUCUAUUGUUUGAUUGAGCCGUGCCAAUAUCACGUAUAUGUUG


mirna_acc: MI0002279
mirna_id: ptc-MIR171c
description: Populus trichocarpa miR171c stem-loop
organism: ptc
sequence:
AAAAGAAAGCGAUGUUGGUGAGGUUCAAUCCGAAGACGGAUUUACACGUGAAAGUAAUUGUAAAAUACGAUCUCAGAUUGAGCCGCGCCAAUAUCACUUUCUCA


mirna_acc: MI0002280
mirna_id: ptc-MIR171d
description: Populus trichocarpa miR171d stem-loop
organism: ptc
sequence:
AAAAGAAAGCGAUGUUGGUGAGGUUCAAUCCGAAGACAGAUUUACACGAGUGAAAGUAAAAUCCGAUCUCAGAUUGAGCCGCGCCAAUAUCACUUUUCAG


mirna_acc: MI0002282
mirna_id: ptc-MIR171f
description: Populus trichocarpa miR171f stem-loop
organism: ptc
sequence:
GUGUCAUUGCGAUGUUGGCCCGGUUCACUCAGAGAAAAGACACCAUUUUUUUUCAAGAAGAUCAUCAAAGCUUGAAAGAAUAAUGGUGGUCGGUCGUCUCUGAUUGAGCCGUGCCAAUAUCUUAGUGCUC


mirna_acc: MI0002283
mirna_id: ptc-MIR171g
description: Populus trichocarpa miR171g stem-loop
organism: ptc
sequence:
GAAAGUGGGGGAUGUUGGGAUGGCUCAAUCAUGUCAAAUCUCCCAAAUUAUGAUGUUGGGUCUUUUAAUCUGAUUGAGCCGUGCCAAUAUCACACUUCUU


mirna_acc: MI0002284
mirna_id: ptc-MIR171h
description: Populus trichocarpa miR171h stem-loop
organism: ptc
sequence:
GAAAGUGGGGGAUGUUGGGAUGGCUCAAUCAUAUCAAAUCUCCCAAACUAUGAUGUUGGGUCGUUUAAUCUGAUUGAGCCGUGCCAAUAUCACACUAACU


mirna_acc: MI0002285
mirna_id: ptc-MIR171i
description: Populus trichocarpa miR171i stem-loop
organism: ptc
sequence:
GAGUGACUAUGAUAUUGGCCUGGUUCACUCAGAUCACGACUUCAGAGCAAAGUGUCUUUCUUCUUCUUCUUUUUCUUCUUCUUCUUGUUUUAUGUUCGUUUGAUUUGAUUGAGCCGUGCCAAUAUCUCAGUACUC


mirna_acc: MI0002287
mirna_id: ptc-MIR172a
description: Populus trichocarpa miR172a stem-loop
organism: ptc
sequence:
UUGUUUGCAGGUGCAGCAUCAUCAAGAUUCACAUUCAAAUAGAUGUACCGAAGCUAUACAGCUAUGUAGCUAGCUAGCAAUGUAUAAUCAUUGUAGGUGAGAAUCUUGAUGAUGCUGCAUCAGCCAUAA


mirna_acc: MI0002288
mirna_id: ptc-MIR172b
description: Populus trichocarpa miR172b stem-loop
organism: ptc
sequence:
UUGUUUGCGGGUGGAGCAUCAUCAAGAUUCACAUGCAAAUGCACGGCCGGUGAUGUUAAGAGUUAAAUCUUUCUUUGUUUCUGUUCAUCUGCCAAAGUUCUUUGGAAGUGAGAAUCUUGAUGAUGCUGCAUCGGCAAUAA


mirna_acc: MI0002289
mirna_id: ptc-MIR172c
description: Populus trichocarpa miR172c stem-loop
organism: ptc
sequence:
UUGUUUGCAGGUGCAGCAUCAUCAAGAUUCACAUUCAAACAGAUGUACGGCAGCUAGCUAGCUAGAUAGAUAGACAGCAAUGUAUUUCUUUGAAGGUGAGAAUCUUGAUGAUGCUGCAUCAGCCAUAA


mirna_acc: MI0002290
mirna_id: ptc-MIR172d
description: Populus trichocarpa miR172d stem-loop
organism: ptc
sequence:
GCAUUGGCGGAUGCGGCAUCAUCAAGAUUCACAAGCUUUAAGGCUUGAGUGAGAGGGGUGGCAUACGGUCACCUCCUUUAGCAAGCUUUAAGGCUUGAGUGAGAGGGGUGGCAUACGGUCACCUCCUUUAGUCCAAAGGGUCCUUUUUUAUGGGAAUCUUGAUGAUGCUGCAUCGGCAAAUA


mirna_acc: MI0002291
mirna_id: ptc-MIR172e
description: Populus trichocarpa miR172e stem-loop
organism: ptc
sequence:
AUAUUGGCCGAUGCGGCAGCAUCAAGAUUCACAAACUUUAAGGCUUGAGUUGGGGUGGUACACGGUCCCCUCCUUUACUCGAAAGGUUCCUUAAUUUCUGAUGGGAAUCUUGAUGAUGCUGCAUCGGCAAAUA


mirna_acc: MI0002292
mirna_id: ptc-MIR172f
description: Populus trichocarpa miR172f stem-loop
organism: ptc
sequence:
UUGUUUGCGGGUGCUGCAUCACCAAGAUUCACAUGCAAAUGCAUGGCCGAUGAUAUAUGUUAGAAAUUUUUUUUAUAUAAAAAAGAUAUCUUUCUUUCUUUCUGAUCAUCUGCCAAAGUUCUUUGGAAGUGAGAAUCUUGAUGAUGCUGCAUCGGCAAUAA


mirna_acc: MI0002293
mirna_id: ptc-MIR172g
description: Populus trichocarpa miR172g stem-loop
organism: ptc
sequence:
CUGUUUGCCUAUGGAGCAUCAUCAAGAUUCACAAGCUUUAUUAGGGCUAGUGUGUGGUGAUGAUGGUGGCUUUUGGUGGUCCCUUUUUUUCAAUCCAAUAGCCCUUUGAAUUGGGAAUCUUGAUGAUGCUGCAGCGGCAAUAA


mirna_acc: MI0002294
mirna_id: ptc-MIR172h
description: Populus trichocarpa miR172h stem-loop
organism: ptc
sequence:
CUGUUUGCCGAUGGAGCACCAUCAAGAUUCACAAACUUUAUUAGGGCUAAUAAGUGGUGAUGAUGGUGGCUUUUGGUGGUCCCUUCGUUUCAACCCAAUAGCCAUUUGAAUUGGGAAUCUUGAUGAUGCUGCAGCGGCAAUAA


mirna_acc: MI0002295
mirna_id: ptc-MIR172i
description: Populus trichocarpa miR172i stem-loop
organism: ptc
sequence:
AUGUGGUGAAGGCAGCAAGUCGCGGGUUGUUGUUGGCGAAAUGGUUCUGUUGGUUGAAUGGAAGAGUAGCUGAAGGAACAGUUUUGGUCGAAGAAGAGAAUCCUGAUGAUGCUGCAACACAGAGC


mirna_acc: MI0002296
mirna_id: ptc-MIR319a
description: Populus trichocarpa miR319a stem-loop
organism: ptc
sequence:
UAAUAGCUAAGAGAGCUUUCUUCAGUCCACUCAUGGGUGGUAGUAGGAUUUAAUUAGCUGCCGACUCAUUCAUCCAAAUACUGAGUUAAAGGACAAGGAGAUUACCCAGUAAAUGAGUGAAUGAUGCGGGAGACAAAUUGAAUCCUAAGCUUCCUGUACUUGGACUGAAGGGAGCUCCCUUUCCUUUU


mirna_acc: MI0002297
mirna_id: ptc-MIR319b
description: Populus trichocarpa miR319b stem-loop
organism: ptc
sequence:
UAAUAGAUAAGAGAGCUUUUUUCGGUCCACUUAUAGAUAGUAAUAUGAUUUAAUUAGUUACCGACUCAUUCAUCCAAAUACUGAGUUAUGAGCUAAGAUUACCCAGUAAAUGAAUGAGUGAUGCGGGAGACAAAUUAAAUCUUAAACUUCCUAUCAUUGGACUGAAGGGAGCUCCCUUUACUGUU


mirna_acc: MI0002298
mirna_id: ptc-MIR319c
description: Populus trichocarpa miR319c stem-loop
organism: ptc
sequence:
AAUGGUUUAAGAGAGCUUUCUUCAGUCCACUCAUGGACGGGCGAAGGGUUUGGAUUAGCUGCCGACUCAUUCAUUCAAACACAGUAGAAAUUAAGGGAGCAGUAUGGCUGCUAUUGUGAAUGUGUGAAUGAUGCGGGAGAUAAAUUUCAUCCUUUUCUUCUCUGUGCUUGGACUGAAGGGAGCUCCCUUUAAUCGU


mirna_acc: MI0002299
mirna_id: ptc-MIR319d
description: Populus trichocarpa miR319d stem-loop
organism: ptc
sequence:
AAUGGUUUAACAGAGCUUCCUUCAGUCCACUCAUGGACGGGCGAAGGGUUUGGAUUAGCUGCCGACUCAUUCAUUCAAACACAGUAGACAAGGAGUGGCAGCGGCUGCUAUUGUGAAUGUGUGAAUGACGCGGGAGAUUAAUUUCAUCCUUUUCUUCUCUGUGCUUGGACUGAAGGGAGCUCCCUUUAAUUGU


mirna_acc: MI0002300
mirna_id: ptc-MIR319e
description: Populus trichocarpa miR319e stem-loop
organism: ptc
sequence:
GGAGGGGCUGAGGUGCUCCUUUUAGUCCAAUACGGAGGGCUGAGAAGCGGCUAGAGCUGCCAUCUCAUGCAUUUAGGCAAUGCUUAACAUUUGACGAAGAGAGGUUAAGCUUGGCCACUUGCAUGGUGUGGGAGCAACUCCUUCCGCAUGCUUUGCUCGCCCAUUGGACUGAAGGGAGCUCCUGGUUUUACC


mirna_acc: MI0002301
mirna_id: ptc-MIR319f
description: Populus trichocarpa miR319f stem-loop
organism: ptc
sequence:


mirna_acc: MI0002302
mirna_id: ptc-MIR319g
description: Populus trichocarpa miR319g stem-loop
organism: ptc
sequence:


mirna_acc: MI0002303
mirna_id: ptc-MIR319h
description: Populus trichocarpa miR319h stem-loop
organism: ptc
sequence:
UUGUAGGGGCUAAAGUGCUCCUUUUAGUCCAAUAAGGAGGGCUGAGAAGCGGCUAGAGCUGCCAUCUCAUGCAUUUAGGCAAUGCUUAACAUUUGGCAAAGAGGUUUAAGCUUGGCCAGGUGCAUGGUGUGGGAGCAACUCCUUCCGCAUGCUUUGUUCGCCCAUUGGACUGAAGGGAGCUCCUGGUUUUACCAC


mirna_acc: MI0002305
mirna_id: ptc-MIR390a
description: Populus trichocarpa miR390a stem-loop
organism: ptc
sequence:
AGAAUCUGUUAAGCUCAGGAGGGAUAGCGCCAUGAGCAUGACAAAGUCUAUGUUUGAGUUAAUCUCAACAAAAUCAAUCCAGUCAUCAGUGGCGCUAUCUAUCCUGAGUUCUAUGGGUU


mirna_acc: MI0002306
mirna_id: ptc-MIR390b
description: Populus trichocarpa miR390b stem-loop
organism: ptc
sequence:
AGAAUCUGUUAAGCUCAGGAGGGAUAGCGCCCUAAGGAUAAUCAUGGGCUCUUUUUAUGUGGUUUUUGAUUCUCAGUGGCGCUAUCCAUCCUGAGUUUCAUUGCUU


mirna_acc: MI0002307
mirna_id: ptc-MIR390c
description: Populus trichocarpa miR390c stem-loop
organism: ptc
sequence:
AGGAUCUGUUAAGCUCAGGAGGGAUAGCGCCAUGAGCUGAUGAUAAGUUGAUGUUUGAUGGGUUAAUCUCAACAUAAUCAAUCUAGUCAUUAGUGGCGCUAUCUAUCCUGAGUUCUAUAGGUU


mirna_acc: MI0002308
mirna_id: ptc-MIR390d
description: Populus trichocarpa miR390d stem-loop
organism: ptc
sequence:
AGAAUCUGUUAAGCUCAGGAGGGAUAGCGCCCUAAGGAUAACCAUGGGCUCUUUUUAUUUGGUUUUUGACUAUCAGUGGCGCUAUCCAUCCUGAGUUUUACUGGUU


mirna_acc: MI0002311
mirna_id: ptc-MIR393c
description: Populus trichocarpa miR393c stem-loop
organism: ptc
sequence:
GCUGGAGUGUUCCAAAGGGAUCGCAUUGAUCUAAUGACUCUCGAUGUCUAAAUCAUAUUAAUGUUUAGUUUUUUCGUUGGAUCAUGCGAUCCCUUAGGAAUUUUCCA


mirna_acc: MI0002312
mirna_id: ptc-MIR393d
description: Populus trichocarpa miR393d stem-loop
organism: ptc
sequence:
GUUGGAGUGUUCCAAAGGGAUCGCAUUGAUCUAAUGACUUUUGAUGUCUAUAUGAUGUUAAUGUUUAGUCAUUUCAUUGGAUCAUGCGAUCCCUUAGGAAUUUUCCA


mirna_acc: MI0002313
mirna_id: ptc-MIR394a
description: Populus trichocarpa miR394a stem-loop
organism: ptc
sequence:
UCAUGUGGGUUUUGCAAAGGGUUUCUUACAGAGUUUUUUGGCAUUCUGUCCACCUCCAUCUGUAGAAACUACAAGUUGUUCUACUUUCUGGAGGUGGGCAUACUGCCAACUGAGCUCUGUUGGUCUCUCUUUGUAAAACCCUCGUGA


mirna_acc: MI0002314
mirna_id: ptc-MIR394b
description: Populus trichocarpa miR394b stem-loop
organism: ptc
sequence:
UCAUGUGGAUUUAGCAAAGGGUUUCUUACAGAGUUUAUUGGCAUUCUGUCCACCUCCUAUCUUUAGAAAUUAGAAUAUCUCUUUCAUAUGGAGGUGGGCAUACUGCCAACCGAGCUCUGUUGGUCUCUCUUUGUAAAACCCUCGUGA


mirna_acc: MI0002315
mirna_id: ptc-MIR395a
description: Populus trichocarpa miR395a stem-loop
organism: ptc
sequence:


mirna_acc: MI0002317
mirna_id: ptc-MIR395c
description: Populus trichocarpa miR395c stem-loop
organism: ptc
sequence:
GUGUCCCCUAGAGUUCCUCUGAGCACUUCAUUGGGAAUCUUCGAUUAAAUGAAAGAGUAUUAUCAUUCCUACUGAAGUGUUUGGGGGAACUCCUGGUGUCA


