# mirna_hairpin

mirna_id: ppy-mir-219-1
hairpin:
-    c --------c    c       cU   U     A  G         a   uau 
 ccgc c         gggc gcggcuc  GAU GUCCA AC CAAUUCUcg guc   g
 |||| |         |||| |||||||  ||| ||||| || ||||||||| |||   g
 ggcg g         cccg cgccgag  cug caggu ug guugagagc cgg   c
g    a cuccaaacc    c       cc   -     c  a         -   ccc 


mirna_id: mml-mir-221
hairpin:
-u     ----       cugg   a    -  ug   u         auuu    -   c 
  gaaca    uccaggu    ggc ugaa cc  gca acaauguag    cugu guu g
  |||||    |||||||    ||| |||| ||  ||| |||||||||    |||| ||| u
  cuugu    aggucca    ucg aCUU GG  CGU UGUUACAUC    GAca cgg u
cu     acaa       ----   g    U  GU   C         ----    a   a 


mirna_id: age-mir-222
hairpin:
ucugccggaagguguggguaccc    u              -     auc   ucuu 
                       ucag ggcucaguagccag uguag   cug    u
                       |||| |||||||||||||| |||||   |||    u
                       aguC CUGGGUCAUCGGUC ACAUC   gac    g
--------ucgauuuucuacggu    U              U     GAu   uaau 


mirna_id: mml-mir-223
hairpin:
ccc  ccuccu   -     a    cc u              gaguug       cgu 
   gg      gca gugcc cgcu  g guauuugacaagcu      gacacuc   g
   ||      ||| ||||| ||||  | ||||||||||||||      |||||||   u
   cc      cgu uacgg guga  C CAUAAACUGUUUGA      CUGUgag   g
-ga  ---auu   a     c    aC C              ------       aug 


mirna_id: ptr-mir-223
hairpin:
c    ccuccu   -     a    cc u              gaguug       cau 
 cugg      gca gugcc cgcu  g guauuugacaagcu      gacacuc   g
 ||||      ||| ||||| ||||  | ||||||||||||||      |||||||   u
 gacc      cgu cacgg guga  C CAUAAACUGUUUGA      CUGUgag   g
-    ---auu   a     c    aC C              ------       aug 


mirna_id: ppy-mir-223
hairpin:
c    ccuccu   -     a    cc u              gaguua       cgu 
 cugg      gca gugcc cgcu  g guauuugacaagcu      gacacuc   g
 ||||      ||| ||||| ||||  | ||||||||||||||      |||||||   u
 gacc      cgu cacgg guga  C CAUAAACUGUUUGA      CUGUgag   g
-    ---auu   a     c    aC C              ------       aug 


mirna_id: sla-mir-223
hairpin:
ccug  cuccu   -   c a    cc u              gaguug       cgu 
    gc     gca gug c cgcu  g guauuugacaagcu      gacacuc   g
    ||     ||| ||| | ||||  | ||||||||||||||      |||||||   u
    cg     cgu cac g guga  C CAUAAACUGUUUGA      CUGUgag   g
--ga  --auu   a   a c    aC C              ------       aug 


mirna_id: mml-mir-224
hairpin:
       CA         U   U      A u   ug  u 
gggcuuu  AGUCACUAG GGU CCGUUU g aga  au g
|||||||  ||||||||| ||| |||||| | |||  || u
cccgaaa  ucagugauc ccg gguaaa c uuu  ua g
       ca         -   u      a -   gu  c 


mirna_id: ptr-mir-197
hairpin:
        c    a       ca    ga   -   a 
ggcugugc gggu gagaggg  gugg  ggu aag g
|||||||| |||| |||||||  ||||  ||| |||  
ccgguaCG CCCA CUCUUCC  CACU  cca uuc c
        A    C       AC    Uc   c   u 


mirna_id: mne-mir-197
hairpin:
             a       ca    ga   -   a 
ggcugugccgggu gagaggg  gugg  ggu aag g
||||||||||||| |||||||  ||||  ||| |||  
ccgguaCGGCCCA CUCUUCC  CACU  cca uuc c
             C       AC    Uc   c   u 


mirna_id: ggo-mir-198
hairpin:
     -GG  CAG        U   uuccug 
ucauu   UC   AGGGGAGA AGG      u
|||||   ||   |||||||| |||       
aguaa   ag   ucucuucu ucc      g
     aua  aua        -   uuuuua 


mirna_id: age-mir-198
hairpin:
--------  -  u  UCC        ---G -   G 
        uc ac GG   AGAGGGGA    C UAG u
        || || ||   ||||||||    | |||  
        ag ug cu   ucuuccuu    g guc a
aguaaaua  a  u  -uu        uuua u   c 


mirna_id: ppa-mir-198
hairpin:
     -GG  C G        U   uuccug 
ucauu   UC A AGGGGAGA AGG      u
|||||   || | |||||||| |||       
aguaa   ag u ucucuucu ucc      g
     aua  a g        -   uuuuua 


mirna_id: mml-mir-198
hairpin:
     -GG  --          ---------    G 
ucauu   UC  CAGAGGGGAA         AUAG u
|||||   ||  ||||||||||         ||||  
aguaa   ag  gucucuucuu         uguc u
     aua  au          ccuuuuuag    c 


mirna_id: sla-mir-198
hairpin:
     -GG  --          CUC  uaccu 
ucauu   UC  CAGAGGGGAG   GA     g
|||||   ||  ||||||||||   ||     u
aguaa   ag  gucuuuucuu   cu     g
     aua  au          --c  uuuua 


mirna_id: lla-mir-198
hairpin:
------uca   GUC         GCU   uacuug 
         cuG   CAGAAGGGA   AGG      u
         |||   |||||||||   |||       
         gau   gucuuuucu   ucc      g
aguaaauaa   ---         ---   uuuuua 


mirna_id: ptr-mir-30c-2
hairpin:
   uacU       U   ACA         guggaa 
aga    GUAAACA CCU   CUCUCAGCu      a
|||    ||||||| |||   |||||||||       
ucu    cauuugu gga   gagggucga      g
   uucu       c   --a         aagaau 


mirna_id: ptr-mir-30d
hairpin:
guu  U         CCC           gua  ac 
   gu GUAAACAUC   GACUGGAAGcu   ag  a
   || |||||||||   |||||||||||   ||   
   cg cguuuguag   cugacuuucga   uc  c
cau  u         --a           --a  ga 


mirna_id: ppa-mir-1
hairpin:
a      c                     ac     ugaaca 
 ccuacu agaguacauacuucuuuaugu  ccaua      u
 |||||| |||||||||||||||||||||  |||||       
 ggaugg uuuuAUGUAUGAAGAAAUGUA  GGUau      a
c      u                     -A     cguaac 


mirna_id: mml-mir-181b-1
hairpin:
ccugugcagagauuauuuuuuaaaa       aucAA         CUG          gaa  g 
                         ggucaca     CAUUCAUUG   UCGGUGGGUU   cu u
                         |||||||     |||||||||   ||||||||||   ||  
                         ccggugu     guaaguaac   agucacucga   ga g
-------------------uucgcc       -caac         --a          aca  u 


mirna_id: ptr-mir-181b-1
hairpin:
ccugugcagagauuauuuuuuaaaa       aucAA         CUG          gaa  g 
                         ggucaca     CAUUCAUUG   UCGGUGGGUu   cu u
                         |||||||     |||||||||   ||||||||||   ||  
                         ccggugu     guaaguaac   agucacucga   gg g
---------------------cgcc       -caac         --a          aca  u 


mirna_id: ppy-mir-181b
hairpin:
ccugugcagagauuauuguuuaaaa       aucAA         CUG          gaa  g 
                         ggucaca     CAUUCAUUG   UCGGUGGGUu   cu u
                         |||||||     |||||||||   ||||||||||   ||  
                         ccggugu     guaaguaac   agucacucga   gg g
-------------------uucgcc       -caac         --a          aca  u 


mirna_id: ggo-mir-181a-1
hairpin:
-u   -uuu   -    -   uc  u A   U      CU       A    g  au 
  gag    uga gguu gcu  ag g ACA UCAACG  GUCGGUG GUuu ga  u
  |||    ||| |||| |||  || | ||| ||||||  ||||||| |||| ||  a
  cuc    acu ccaa cgg  uc C UGU AGUUGC  CAGCUAC CAaa cu  a
ac   uucu   a    u   ua  C A   U      --       -    a  aa 


mirna_id: ggo-mir-181b
hairpin:
ccugugcagagauuauuuuuuaaaa       aucAA         CUG          gaa  g 
                         ggucaca     CAUUCAUUG   UCGGUGGGUU   cu u
                         |||||||     |||||||||   ||||||||||   ||  
                         ccggugu     guaaguaac   agucacucga   gg g
-------------------uucgcc       -caac         --a          aca  u 


mirna_id: age-mir-15a
hairpin:
     gaguaaa UA        UA          ga  u 
ccuug       g  GCAGCACA  AUGGUUUGUG  uu u
|||||       |  ||||||||  ||||||||||  || g
ggaac       c  cgucgugu  uaccggacgu  aa a
     auaaaaa uc        ua          gg  a 


mirna_id: age-mir-16
hairpin:
      ag   c          -  A        C u   gauu 
gucagc  ugc uUAGCAGCAC GU AAUAUUGG G uaa    c
||||||  ||| |||||||||| || |||||||| | |||     
caguug  aug agucgucgug ca uuaugacc c auu    u
      ga   a          u  a        u u   aaaa 


mirna_id: lca-mir-16
hairpin:
guca     ---gc     C  CAC    AUA    U  u 
    gcagu     cuUAG AG   GUAA   UUGG Gu a
    |||||     ||||| ||   ||||   |||| ||  
    uguca     gaauc uc   uauu   aauc ua a
gccg     auuau     -  ---    -aa    u  g 


mirna_id: ppy-mir-16-1
hairpin:
      ag   c          -  A        c u   gauu 
gucagc  ugc uUAGCAGCAC GU AAUAUUGG g uaa    c
||||||  ||| |||||||||| || |||||||| | |||     
caguug  aug agucgucgug ca uuaugacc c auu    u
      ga   a          u  a        u u   aaaa 


mirna_id: lla-mir-16
hairpin:
      ag   c          -  A        C c   gauu 
gucagc  ugc uUAGCAGCAC GU AAUAUUGG G uaa    c
||||||  ||| |||||||||| || |||||||| | |||     
cgguug  aug agucgucgug ca uuaugacc c auu    u
      ga   a          u  a        u u   aaaa 


mirna_id: ggo-mir-17
hairpin:
    ga       -CA        A  G     G   -  au 
guca  auaaugu   AAGUGCUU CA UGCAG UAG Ug  a
||||  |||||||   |||||||| || ||||| ||| ||  u
cagu  uauuacg   UUCACGGA GU ACGUC Auc ac  g
    gg       aUG        A  G     -   u  gu 


mirna_id: ggo-mir-18a
hairpin:
u   cU    U   UC   U    A   -  aa u 
 guu  AAGG GCA  UAG GCAG UAg ug  g a
 |||  |||| |||  ||| |||| ||| ||  | g
 cgg  uucc cgu  auc cguc auc ac  u a
a   uc    u   ga   c    -   u  ga u 


mirna_id: ggo-mir-19b-1
hairpin:
     uu                 -  -      uc    ugugu 
cacug  cuaugguuaguuuugca gg uuugca  cagc     g
|||||  ||||||||||||||||| || ||||||  ||||     a
gugau  ggugucAGUCAAAACGU CC AAACGU  GUcg     u
     --                 A  U      --    ucuua 


mirna_id: ggo-mir-92-1
hairpin:
---cu   uac            c   u           uu 
     uuc   acagguugggau ggu gcaaugcugug  u
     |||   |||||||||||| ||| |||||||||||   
     gag   UGUCCGGCCCUG UCA CGUUAUgguau  c
gguuu   --u            U   -           gu 


mirna_id: lca-mir-20
hairpin:
    c   -A          A      G   -  uu 
guag acU  AAGUGCUUAU GUGCAG UAg ug  u
|||| |||  |||||||||| |||||| ||| ||   
cguc uga  uucacgagua uacguc auc au  a
    a   aa          c      -   u  ug 


mirna_id: lca-mir-19b-1
hairpin:
     uu                 -  -      uc    ugugu 
cacug  cuaugguuaguuuugca gg uuugca  cagc     a
|||||  ||||||||||||||||| || ||||||  ||||     a
gugau  ggugucAGUCAAAACGU CC AAACGU  GUcg     u
     --                 A  U      --    ucuua 


mirna_id: age-mir-19a
hairpin:
    u  u                 --      ---    ag 
gcag cc cuguuaguuuugcauag  uugcac   uaca  a
|||| || |||||||||||||||||  ||||||   ||||  a
cguc gg gguAGUCAAAACGUAUC  AACGUG   augu  g
    c  u                 UA      Uug    ac 


mirna_id: ppy-mir-17
hairpin:
    ga       -CA        A  G     G   -  au 
guca  auaaugu   AAGUGCUU CA UGCAG UAG Ug  a
||||  |||||||   |||||||| || ||||| ||| ||  c
cagu  uauuacg   UUCACGGA GU ACGUC Auc ac  g
    gg       aUG        A  G     -   u  gu 


mirna_id: mne-mir-19a
hairpin:
    u  u                 --      ---    gg 
gcag cc cuguuaguuuugcauag  uugcac   uaca  a
|||| || |||||||||||||||||  ||||||   ||||  a
cguc gg gguAGUCAAAACGUAUC  AACGUG   augu  g
    c  u                 UA      Uug    aa 


mirna_id: mml-mir-215
hairpin:
aucauuaa   a      ------      a A  A    -U   U         cu  ag 
        gaa ugguau      acagga a UG CCUA  GAA UGACAGACa  au  c
        ||| ||||||      |||||| | || ||||  ||| |||||||||  ||   
        cuu aucgug      ugucuu u ac ggau  cuu acugucugu  ug  u
------aa   c      ucagua      a a  c    uu   u         -u  ag 


mirna_id: ptr-mir-215
hairpin:
aucauuca   a      ------      a A  A    -U   U          uaua 
        gaa ugguau      acggga a UG CCUA  GAA UGACAGACaa    g
        ||| ||||||      |||||| | || ||||  ||| ||||||||||    c
        cuu aucgug      ugucuu u ac ggau  cuu acugucuguu    u
------aa   c      ucagua      a a  c    uu   u          ugag 


mirna_id: ppy-mir-194
hairpin:
a    - uu      U         A      G    cu  gu 
 uggu g  aucaag GUAACAGCA CUCCAU UGGA  gu  a
 |||| |  |||||| ||||||||| |||||| ||||  ||   
 acca u  uaguuu cauuguugu gaggug accu  ua  c
a    u gg      u         a      -    -u  ac 


mirna_id: ppy-mir-215
hairpin:
aucauuca   a      ------      a A  A    -U   U          u  ag 
        gaa ugguau      acagga a UG CCUA  GAA UGACAGACaa ac  c
        ||| ||||||      |||||| | || ||||  ||| |||||||||| ||   
        cuu aucgug      ugucuu u ac ggau  cuu acugucuguu ug  u
------aa   c      ucaaca      a a  c    uu   u          -  ag 


mirna_id: ggo-mir-215
hairpin:
aucauuca   a      ------      a A  AC   -U   U          uaua 
        gaa ugguau      acggga a UG  CUA  GAA UGACAGACaa    g
        ||| ||||||      |||||| | ||  |||  ||| ||||||||||    c
        cuu aucgug      ugucuu u ac  gau  cuu acugucuguu    u
------aa   c      ucagua      a a  ca   uu   u          ugag 


mirna_id: ggo-mir-23a
hairpin:
  c   c     -       g    g      cuuc 
gg cgg ugggg uuccugg gaug gauuug    c
|| ||| ||||| ||||||| |||| ||||||     
cc gcc aCCUU AGGGACC UUAC CUAaac    u
  a   a     U       G    A      acug 


mirna_id: ggo-mir-27a
hairpin:
   a  a  a         ug  u       g  u cac 
cug gg gc gggcuuagc  cu gugagca gg c   a
||| || || |||||||||  || ||||||| || |    
gac cc CG CUUGAAUCG  GA CACUUgu cu g   c
   c  C  C         GU  -       g  - aac 


mirna_id: ggo-mir-24
hairpin:
     cc   cg   -cu         --aa      u 
cucug  ucc  ugc   acugagcug    acacag u
|||||  |||  |||   |||||||||    |||||| g
ggGAC  AGG  ACG   UGACUCGGU    uguguu g
     -A   --   ACU         caca      u 


mirna_id: age-mir-23a
hairpin:
  c   c     -       g    g      c  c 
gg cgg ugggg uuccugg gaug gauuug ug c
|| ||| ||||| ||||||| |||| |||||| || u
cc gcc aCCUU AGGGACC UUAC CUAaac ac a
  a   a     U       G    A      -  u 


mirna_id: age-mir-27a
hairpin:
   a  a  a         ug  u       -----g  uu 
cug gg gc gggcuuagc  cu gugagca      gg  c
||| || || |||||||||  || |||||||      ||   
gac cc CG CUUGAAUCG  GA CACUUgu      cc  a
   c  C  C         GU  -       acugaa  uc 


mirna_id: lca-mir-23a
hairpin:
  c   c     -       g    g      cuac 
gg cgg ugggg uuccugg gaug gauuug    c
|| ||| ||||| ||||||| |||| ||||||     
cc gcc aCCUU AGGGACC UUAC CUAaac    u
  a   a     U       G    A      acua 


mirna_id: lca-mir-27a
hairpin:
   a  a  a         ug  u       -----g   c 
cug gg gc gggcuuagc  cu gugagca      ggu c
||| || || |||||||||  || |||||||      |||  
ggc cc CG CUUGAAUCG  GA CACUUgu      cca a
   c  C  C         GU  -       acuaaa   c 


mirna_id: ppy-mir-27a
hairpin:
   a  a  a         ug  u       -----g   c 
cug gg gc gggcuuagc  cu gugagca      ggu c
||| || || |||||||||  || |||||||      |||  
gac cc CG CUUGAAUCG  GA CACUUgu      cca a
   c  C  C         GU  -       guugaa   c 


mirna_id: mml-mir-24-2
hairpin:
cucugcc   c  g   a         aaca    ug  u 
       ucc gu ccu cugagcuga    cagu  gu u
       ||| || ||| |||||||||    ||||  ||  
       agG CA GGA GACUUGACU    GUca  cg g
-------   A  A   C         --CG    ca  u 


mirna_id: mne-mir-27a
hairpin:
   a  -a  a         ug  u       g  u cac 
cug gg  gc gggcuuagc  cu gugagca gg c   a
||| ||  || |||||||||  || ||||||| || |    
gac cc  CG CUUGAAUCG  GA CACUUgu cu g   c
   c  cC  C         GU  -       g  - aac 


mirna_id: ggo-mir-106b
hairpin:
     c     -UA       G       A A    --  uc 
ccugc ggggc   AAGUGCU ACAGUGC G Uagu  gg  c
||||| |||||   ||||||| ||||||| | ||||  ||   
ggacg ccucg   uucaugg ugucacg c aucg  cc  u
     a     ucg       g       c -    ug  uc 


mirna_id: ggo-mir-93
hairpin:
          -cA       -     U    G   ug  au 
cugggggcuc   AAGUGCU GUUCG GCAG UAG  ug  u
||||||||||   ||||||| ||||| |||| |||  ||   
ggcccccgag   uucacga cgagu cguc auc  gc  a
          ccc       u     -    -   ca  cc 


mirna_id: ggo-mir-25
hairpin:
    a ug   ag    g     uu g     u   --  ac 
ggcc g  uug  aggc gagac  g gcaau gcu  gg  g
|||| |  |||  |||| |||||  | ||||| |||  ||  c
ccgg c  gac  UCUG CUCUG  C CGUUA Cgg  cc  u
    c gu   AG    G     UU A     -   gu  cg 


mirna_id: age-mir-93
hairpin:
          -cA       -     U    G   u  g u 
cugggggcuc   AAGUGCU GUUCG GCAG UAG gu a u
||||||||||   ||||||| ||||| |||| ||| || | a
ggcccccgag   uucacga cgagu cguc auc ca u c
          ccc       u     -    -   -  g c 


mirna_id: ptr-mir-25
hairpin:
   --ca     gaga   g     uu g     u   --  ac 
ggc    guguu    ggc gagac  g gcaau gcu  gg  g
|||    |||||    ||| |||||  | ||||| |||  ||  c
ccg    cgcag    UCG CUCUG  C CGUUA Cgg  cc  u
   cccg     --AG   G     UU A     -   gu  cg 


mirna_id: mml-mir-106b
hairpin:
           -UA       G       A A    --  uc 
ccugcuggggc   AAGUGCU ACAGUGC G Uagu  gg  c
|||||||||||   ||||||| ||||||| | ||||  ||   
ggacgaccucg   uucaugg ugucacg c aucg  cc  u
           ucg       g       c -    ug  uc 


mirna_id: mml-mir-93
hairpin:
          -cA       -     U    G   ug  au 
cugggggcuc   AAGUGCU GUUCG GCAG UAG  ug  u
||||||||||   ||||||| ||||| |||| |||  ||   
gacccccgag   uucacga cgagu cguc auc  gc  a
          ccc       u     -    -   ca  ca 


mirna_id: sla-mir-93
hairpin:
          -cA       -     U    G   ug  au 
cugggggcuc   AAGUGCU GUUCG GCAG UAG  ug  u
||||||||||   ||||||| ||||| |||| |||  ||   
ggcccccgag   uucacga cgagu cguc auc  ac  a
          ccc       u     -    -   ca  cc 


mirna_id: lla-mir-106b
hairpin:
     c     -UA       G       A A   ug cc 
ccugc ggggc   AAGUGCU ACAGUGC G Uag  u  u
||||| |||||   ||||||| ||||||| | |||  |  c
ggacg ccucg   uucaugg ugucacg c auc  g  u
     a     ucg       g       c -   gu cc 


mirna_id: lla-mir-93
hairpin:
cuc       -cA       -     U    G   u  g u 
   ggggcuc   AAGUGCU GUUCG GCAG UAG gu a u
   |||||||   ||||||| ||||| |||| ||| || | a
   ccccgag   uucacga cgagu cguc auc ca u c
ggc       ccc       u     -    -   -  g c 


mirna_id: mml-mir-183
hairpin:
ccgcagaa    ac  -----         g      --AC     GA        --   ac 
        cgug  uc     cuguucugu UAUGGC    UGGUA  AUUCACUG  uga  a
        ||||  ||     ||||||||| ||||||    |||||  ||||||||  |||   
        gcac  ag     gacgagaca auaccg    gccau  uaagugac  gcu  g
-------a    cu  acaga         a      ggaa     --        ug   cu 


mirna_id: mml-mir-96
hairpin:
ugg  g  U        A      UU      ---   uc 
   cc au UUGGCACU GCACAU  UUGCuu   gug  u
   || || |||||||| ||||||  ||||||   |||   
   gg ua aaccguga cgugua  aacgag   cgc  c
aaa  g  u        -      cu      ucu   cu 


mirna_id: ptr-mir-183
hairpin:
ccgcaga   u  ---c  -         g      --AC     GA        --   ac 
       gug ga    uc cuguucugu UAUGGC    UGGUA  AUUCACUG  uga  a
       ||| ||    || ||||||||| ||||||    |||||  ||||||||  |||   
       cac cu    ag gacgagaca auaccg    gccau  uaagugac  acu  g
-----ag   -  agac  a         a      ggaa     --        ug   cu 


mirna_id: sla-mir-183
hairpin:
c  ca  a g  a   c        g      --AC     GA        --   ac 
 cg  ga c ug cuc uguucugu UAUGGC    UGGUA  AUUCACUG  uga  a
 ||  || | || ||| |||||||| ||||||    |||||  ||||||||  |||   
 gc  cu g ac gag acgagaca auaccg    gccau  uaagugac  gcu  g
a  uc  a -  a   -        a      ggaa     --        ug   cu 


mirna_id: sla-mir-96
hairpin:
ugg  g  U        A      UU      gucuc 
   cc au UUGGCACU GCACAU  UUGCuu     u
   || || |||||||| ||||||  ||||||     c
   gg ua aaccguga cgugua  aacgag     c
aaa  g  u        -      cu      ucucg 


mirna_id: ggo-mir-106a
hairpin:
  u   cc      -        A  G     G   C  u 
cc ugg  auguAA AAGUGCUU CA UGCAG UAG uu u
|| |||  |||||| |||||||| || ||||| ||| || u
gg acc  uacauu uucacgaa gu acguc auc ag g
  u   au      c        c  a     -   u  a 


mirna_id: ggo-mir-19b-2
hairpin:
      cuac                 -  -       uuca       u 
acauug    uuacaauuaguuuugca gg uuugcau    gcguaua a
||||||    ||||||||||||||||| || |||||||    |||||||  
uguaau    aguguuAGUCAAAACGU CC AAACGUG    uguauau u
      ----                 A  U       Ucgg       g 


mirna_id: ggo-mir-92-2
hairpin:
  a   c     g     uu  u   u     -      
uc ucc ugggu gggau  gu gca uacuu guguu 
|| ||| ||||| |||||  || ||| ||||| |||| c
ag agg GUCCG CCCUG  CA CGU AUgaa uauau 
  a   U     G     UU  -   U     a      


mirna_id: age-mir-19b-2
hairpin:
acauugcuac                 -  -      uuu    -     ca 
          uuacaauuaguuuugca gg uuugca   cagc guaua  u
          ||||||||||||||||| || ||||||   |||| |||||   
          aguguuAGUCAAAACGU CC AAACGU   GUcg uauau  g
----uguacu                 A  U      ---    g     au 


mirna_id: lca-mir-19b-2
hairpin:
auacugcuac                 -  -      uuu    g au 
          ucacgauuaguuuugca gg uuugca   cagc u  a
          ||||||||||||||||| || ||||||   |||| |  c
          agugcuAGUCAAAACGU CC AAACGU   GUcg a  a
----uguaau                 A  U      ---    g au 


mirna_id: lca-mir-92-2
hairpin:
  a    ug   g     uu  u   u     guguu 
uc uccg  ggu gggau  gu gca uacuu     a
|| ||||  ||| |||||  || ||| |||||      
ag aggU  CCG CCCUG  CA CGU AUgaa     u
  a    GU   G     UU  -   U     augua 


mirna_id: ptr-mir-19b-2
hairpin:
g      cuac                 -  -       uuca       u 
 acauug    uuacaauuaguuuugca gg uuugcau    gcguaua a
 ||||||    ||||||||||||||||| || |||||||    |||||||  
 uguaau    aguguuAGUCAAAACGU CC AAACGUG    uguauau u
-      ----                 A  U       Ucgg       g 


mirna_id: ptr-mir-92-2
hairpin:
----    cccu    g     uu  u   u     g  u 
    ucau    gggu gggau  gu gca uacuu ug u
    ||||    |||| |||||  || ||| ||||| || c
    agUG    UCCG CCCUG  CA CGU AUgaa ac c
agag    ----    G     UU  -   U     a  a 


mirna_id: sla-mir-19b-2
hairpin:
      cuac                 -  -      uuu    -     ca 
acauug    uuacaguuaguuuugca gg uuugca   cagc guaua  u
||||||    ||||||||||||||||| || ||||||   |||| |||||   
uguaau    aguguuAGUCAAAACGU CC AAACGU   GUcg uauau  g
      ----                 A  U      ---    g     au 


mirna_id: hsa-mir-488
hairpin:
    a      cu  C   U      A  C        guu 
gaga ucaucu  CC AGA AAUGGC CU UCAAacaa   u
|||| ||||||  || ||| |||||| || ||||||||   c
cucu aguaga  GG UCU UUAUCG GA AGUUuguu   c
    c      CU  U   -      -  A        aaa 


mirna_id: hsa-mir-489
hairpin:
       c     g             c c    ua     a 
guggcag uuggu gucguauguguga g cauu  cuuga c
||||||| ||||| ||||||||||||| | ||||  |||||  
caucguc aauCG CGGCAUAUACACU C GUGa  ggauu c
       a     A             A A    --     u 


mirna_id: hsa-mir-490
hairpin:
u     -cc      g    -   aguucauu        C      --         G   caa   u 
 ggagg   uugcug uuug gaa        guucgaca CAUGGA  UCUCCAGGU GGU   guu a
 |||||   |||||| |||| |||        |||||||| ||||||  ||||||||| |||   |||  
 ccuuc   ggcgac gaac cuu        cgaguuGU GUACCU  GGAGGUCCA Cca   uag g
a     aca      -    a   ------gu        C      CA         A   -cg   a 


mirna_id: hsa-mir-491
hairpin:
 ug       ug     U      CC   C          a 
u  acuuagc  gguAG GGGGAA  CUU CAUGAGGagu g
|  |||||||  ||||| ||||||  ||| |||||||||| a
g  ugggucg  cCAUC UCCCUU  GAA GUAUUCcuca a
 gu       gu     U      -A   C          c 


mirna_id: hsa-mir-511-1
hairpin:
    a   ac    cG           CU   G   g    ua 
caau gac  ccau  UGUCUUUUGCU  GCA UCA uaaa  u
|||| |||  ||||  |||||||||||  ||| ||| ||||   
guua cug  ggua  acagaaaacga  ugu agu guuu  u
    c   gu    ag           ug   a   -    uu 


mirna_id: hsa-mir-146b
hairpin:
  u      G        AU        CU  ga  u 
cc ggcacU AGAACUGA  UCCAUAGG  gu  gc c
|| |||||| ||||||||  ||||||||  ||  ||  
gg ccguGG UCUUGACU  AGGUGUCC  Ua  cg u
  c      -        -C        CG  -a  a 


mirna_id: hsa-mir-202
hairpin:
   cuca   cc     -       u           -A           G   au 
cgc    gag  gcccg ccguucc uuUUCCUAUGC  UAUACUUCUUU agg  c
|||    |||  ||||| ||||||| |||||||||||  ||||||||||| |||   
gcg    cuc  ugggc ggcgggg aaAAGGGUACG  AUAUGGAGAaa ucc  u
   accc   -c     u       c           GG           -   gg 


mirna_id: hsa-mir-492
hairpin:
caa  a      cuacuacag  c   c AG  C           GAU        ccacc 
   cu cagcca         ga cau g  GA CUGCGGGACAA   UCUUggug     a
   || ||||||         || ||| |  || |||||||||||   ||||||||     u
   ga gucggu         cu gua c  cu gacguccuguu   aggaccgc     u
gua  c      ------caa  c   a aa  a           ---        aagag 


mirna_id: hsa-mir-493
hairpin:
     cuc        U                    cauuc  u 
cuggc   cagggcuU GUACAUGGUAGGCUUUCAUU     gu u
|||||   |||||||| ||||||||||||||||||||     ||  
gaccg   gucccGGA CGUGUGUCAUCUGGAAGUgg     ca g
     --u        C                    -cuua  c 


mirna_id: hsa-mir-432
hairpin:
u  -  c       U U     UA       G     a   u -  uu 
 ga cu cuccagg C UGGAG  GGUCAUU GGUGG ucc c ua  u
 || || ||||||| | |||||  ||||||| ||||| ||| | ||   
 cu ga gagguUC G ACCUC  UCGGUAG UCacc ggg g au  c
a  a  u       U U     -C       G     -   u c  uc 


mirna_id: hsa-mir-494
hairpin:
      c            gu      -   c   -  uuu 
gauacu gaaggagagguu  ccgugu ugu uuc uc   a
|||||| ||||||||||||  |||||| ||| ||| ||   u
cuauga uuuuuuCUCCAA  GGCACA ACA AAG ag   u
      -            AG      U   -   U  uau 


mirna_id: hsa-mir-495
hairpin:
u      u          U  -       AU     - uuu 
 gguacc gaaaaGAAGU GC CCAUGUU  UUUCG c   a
 |||||| |||||||||| || |||||||  ||||| |   u
 cuaugg uuuUUCUUCA CG GGUACAA  AAAgc g   a
a      c          -  U       AC     a ugu 


mirna_id: hsa-mir-496
hairpin:
      -----uca     u    u        u     gu         uua 
cccaag        gguac cgaa ggagguug ccaug  guguucauu   u
||||||        ||||| |||| |||||||| |||||  |||||||||    
ggguuc        ucaug gcuu cCUCUAAC GGUAC  UAUGAGUag   u
      uucuuaac     -    u        C     AU         uau 


mirna_id: hsa-mir-193b
hairpin:
   gu       u    GU         G  A  Ag uua 
gug  cucagaa CGGG  UUUGAGGGC AG UG  u   u
|||  ||||||| ||||  ||||||||| || ||  |   g
uac  ggguuuU GCCC  AAACUCCCG UC Ac  a   u
   ug       C    UG         G  A  cu uuu 


mirna_id: hsa-mir-497
hairpin:
  a cc    -   g         - -----    G    C         U  --   ac 
cc c  cggu ccu cucccgccc C     AGCA CACA UGUGGUUUG ac  ggc  u
|| |  |||| ||| ||||||||| |     |||| |||| ||||||||| ||  |||   
gg g  gcca gga ggggguggg g     UUGU GUGU ACACCAAAC ug  ccg  g
  a cc    c   -         a cgAGA    G    C         c  ca   gu 


mirna_id: hsa-mir-181d
hairpin:
      --      -     ----aca   ga       aucA         G UG          guga  a u 
gucccc  uccccu aggcc       gcc  ggucaca    ACAUUCAUU U  UCGGUGGGUu    gg c g
||||||  |||||| |||||       |||  |||||||    ||||||||| |  ||||||||||    || |  
cagggg  agggga uucgg       cgg  ucggugu    uguaaguag g  ggccacccag    cc g a
      ua      a     cacagac   -g       -cac         g --          ---a  - g 


mirna_id: hsa-mir-512-1
hairpin:
u       ug   CA      CU   G       ----    g 
 cucaguc  ugg  CUCAGC  UGA GGCACUU    UCug u
 |||||||  |||  ||||||  ||| |||||||    ||||  
 gagucag  acC  GAGUCG  ACU UCGUGAA    agac g
g       ua   UG      AU   G       agua    c 


mirna_id: hsa-mir-512-2
hairpin:
   a   --       ug   CA      CU   G       ----    g 
ggu cuu  cucaguc  ugg  CUCAGC  UGA GGCACUU    UCug u
||| |||  |||||||  |||  ||||||  ||| |||||||    ||||  
cca gag  gagucag  acC  GAGUCG  ACU UCGUGAA    agac g
   c   cg       ua   UG      AU   G       agua    c 


mirna_id: hsa-mir-498
hairpin:
aaccc        -aag  aag            -        - A     C       uaua 
     uccuuggg    ug   cucaggcuguga UUUCAAGC C GGGGG GUUUUUC    a
     ||||||||    ||   |||||||||||| |||||||| | ||||| |||||||    c
     aggaaucu    ac   gaguuugacacu gaaguucg g ccucc cgaaaag    u
-uuga        gcua  -ga            c        a a     a       uagg 


mirna_id: hsa-mir-520e
hairpin:
    cu  u             u       g     guug   g 
ucuc  gc gugacccucaaga ggaagca uuucu    ucu a
||||  || ||||||||||||| ||||||| |||||    |||  
agag  ug cauuGGGAGUUUU CCUUCGU AAAga    agg a
    uu  u             U       G     ---a   a 


mirna_id: hsa-mir-515-1
hairpin:
     u     c  U           A    UU      gu 
ucuca gcagu aU CUCCAAAAGAA GCAC  UCUGuu  c
||||| ||||| || ||||||||||| ||||  ||||||  u
agagu uguca UG GAGGUUUUCUU CGUG  AGacga  g
     u     U  C           C    --      aa 


mirna_id: hsa-mir-519e
hairpin:
     u     c  U   C      GA      UC     ga 
ucuca gcagu aU CUC AAAAGG  GCACUU  uguuu  a
||||| ||||| || ||| ||||||  ||||||  |||||   
agagu uguca UG GAG UUUUCC  CGUGAA  acaaa  a
     u     U  U   A      UC      --     ag 


mirna_id: hsa-mir-520f
hairpin:
        u                        u  gugg  a 
ucucaggc gugacccucuaaagggaagcgcuu cu    uc g
|||||||| |||||||||||||||||||||||| ||    || a
aggguuug caUUGGGAGAUUUUCCUUCGUGAA ga    ag a
        c                        c  --aa  a 


mirna_id: hsa-mir-519c
hairpin:
      c      c            A         Guug  u 
ucucag cuguga cCUCUAGAGGGA GCGCUUUCU    uc g
|||||| |||||| |||||||||||| |||||||||    || a
agaguu gacauU GGAGAUUUUUCU CGUGAAAga    ag a
      u      A            A         --aa  a 


mirna_id: hsa-mir-520a
hairpin:
         u   cC                    g  g    
cucaggcug gac  UCCAGAGGGAAGUACUUUCU uu ucu 
||||||||| |||  |||||||||||||||||||| || || g
gaguuuggc uUG  AGGUUUCCCUUCGUGAAAga aa aga 
         u   UC                    a  g    


mirna_id: hsa-mir-526b
hairpin:
      u    c     U                G  g c 
ucaggc guga cCUCU GAGGGAAGCACUUUCU Uu u u
|||||| |||| ||||| |||||||||||||||| || | g
agucug cauu GGAGA UUUCCUUCGUGAAAGa aa a a
      u    C     U                g  g a 


mirna_id: hsa-mir-519b
hairpin:
  u  u    c            A         Guug  u 
ca gc guga cCUCUAGAGGGA GCGCUUUCU    uc g
|| || |||| |||||||||||| |||||||||    || a
gu ug cauU GGAGAUUUUCCU CGUGAAAga    ag a
  u  u    U            A         --aa  a 


mirna_id: hsa-mir-525
hairpin:
             u   C       U  A      c  aug 
cucaagcugugac CUC AGAGGGA GC CUUUCU uu   u
||||||||||||| ||| ||||||| || |||||| ||   g
ggguuuggcauuG GAG UUUCCCU CG GGAAGa aa   a
             C   A       U  C      a  aaa 


mirna_id: hsa-mir-523
hairpin:
     ugcu           G          U    Guug  u 
ucuca    gugaccCUCUA AGGGAAGCGC UUCU    uc g
|||||    ||||||||||| |||||||||| ||||    || a
agagu    cauUGGGAGAU UCCCUUCGCG AAGa    ag a
     uucc           A          C    --aa  a 


mirna_id: hsa-mir-518f
hairpin:
     ugcu    c               A     ---    gu 
ucuca    guga cCUCUAGAGGGAAGC CUUUC   UCuu  c
|||||    |||| ||||||||||||||| |||||   ||||   
agagu    cauu GGAGAUUUCUCUUCG GAAAG   agaa  u
     uucu    a               C     aaa    aa 


mirna_id: hsa-mir-520b
hairpin:
       c               guug  u 
cccucua agggaagcgcuuucu    uc g
||||||| |||||||||||||||    || a
GGGAGAU UUCCUUCGUGAAAga    ag a
       U               --aa  a 


mirna_id: hsa-mir-518b
hairpin:
   u      gc    c      a       uc    g  u 
uca gcugug  ccuc agaggg agcgcuu  uguu uc g
||| ||||||  |||| |||||| |||||||  |||| || a
agu uggcau  GGAG UUUCCC UCGCGAA  ACaa ag a
   u      uU    A      C       --    a  a 


mirna_id: hsa-mir-526a-1
hairpin:
      cu    c               A      G  g  u 
cucagg  guga cCUCUAGAGGGAAGC CUUUCU uu cu g
||||||  |||| ||||||||||||||| |||||| || ||  
gaguuu  cauu ggagauuuuccuucg gaaaga aa ga a
      cu    a               c      g  -  a 


mirna_id: hsa-mir-520c
hairpin:
        u  cg                       Guug  u 
ucucaggc gu  ucCUCUAGAGGGAAGCACUUUCU    uc g
|||||||| ||  |||||||||||||||||||||||    || a
agaguuug ca  GGGAGAUUUUCCUUCGUGAAAga    ag a
        c  uU                       --aa  a 


mirna_id: hsa-mir-518c
hairpin:
gcgagaaga     u        U              A   UC    g  u 
         ucuca gcugugac CUCUGGAGGGAAGC CUU  UGuu uc g
         ||||| |||||||| |||||||||||||| |||  |||| || a
         agagu uggcauUG GAGAUUUCUCUUCG GAA  ACaa ag a
----cgaaa     u        U              C   --    a  a 


mirna_id: hsa-mir-524
hairpin:
     u        c  A           A      Cuug     
ucuca gcugugac CU CAAAGGGAAGC CUUUCU    ucca 
||||| |||||||| || ||||||||||| ||||||    ||| a
agagu uggcauug GA GUUUCCCUUCG GGAAGa    agga 
     u        U  G           C      --aa     


mirna_id: hsa-mir-517a
hairpin:
              C       U   A    U    g  g a 
ucucaggcagugac CUCUAGA GGA GCAC GUCU uu u u
|||||||||||||| ||||||| ||| |||| |||| || | a
agaguuugucauUG GAGAUUU CCU CGUG UAga aa a a
              U       C   A    C    a  g a 


mirna_id: hsa-mir-519d
hairpin:
     u  u     c   c       a      uc      uuu 
uccca gc gugac cuc aaaggga gcgcuu  uguuug   u
||||| || ||||| ||| ||||||| ||||||  ||||||    
agggu ug cauuG GAG UUUCCCU CGUGAA  ACaaau   c
     u  c     U   A       C      --      ucu 


mirna_id: hsa-mir-521-2
hairpin:
     g  u     u   c         ---aa    c    gu 
ucucg gc gugac cuc aaagggaag     uuuu ucuu  c
||||| || ||||| ||| |||||||||     |||| ||||   
agagu ug cauUG GAG UUUCCCUUC     Agaa agaa  u
     g  c     U   A         ACGCA    a    aa 


mirna_id: hsa-mir-520d
hairpin:
             g  UA           C      guug  u 
ucucaagcuguga uC  CAAAGGGAAGC CUUUCu    uc a
||||||||||||| ||  ||||||||||| ||||||    || a
agaguuuggcauU GG  GUUUCUCUUCG GAAAga    ag a
             G  UG           U      --aa  a 


mirna_id: hsa-mir-517b
hairpin:
     C       U   A    U    guugu 
gugac CUCUAGA GGA GCAC GUCU     c
||||| ||||||| ||| |||| ||||     u
cauUG GAGAUUU CCU CGUG UAga     a
     U       C   A    C    aaaga 


mirna_id: hsa-mir-520g
hairpin:
     u  u     c         -        uc     guugu 
uccca gc gugac cucuagagg aagcacuu  uguuu     c
||||| || ||||| ||||||||| ||||||||  |||||     u
agggu ug cauUG GAGAUUUCC UUCGUGAA  ACAaa     g
     u  c     U         C        --     aaaga 


mirna_id: hsa-mir-516b-2
hairpin:
     -u  u      A        UAA          g guuu 
ucuca  ga gugacc UCUGGAGG   GAAGCACUUU u    u
|||||  || |||||| ||||||||   |||||||||| |     
agagu  cu cauUGG AGACUUUC   CUUCGUgaaa a    g
     uu  -      G        ---          g aagu 


mirna_id: hsa-mir-526a-2
hairpin:
          AG     A   CU    -G  g 
gugaccCUCU  AGGGA GCA  UUCU  uu a
||||||||||  ||||| |||  ||||  ||  
cauugggaga  uuccu cgu  aaga  ag a
          cu     a   ac    aa  a 


mirna_id: hsa-mir-518e
hairpin:
      -  ug    c    AG               Guuggc 
ucucag gc  ugac CUCU  AGGGAAGCGCUUUCU      u
|||||| ||  |||| ||||  |||||||||||||||      a
agaguu cg  auuG GAGA  UCCCUUCGCGAAAga      a
      u  ca    U    CU               aaagaa 


mirna_id: hsa-mir-518a-1
hairpin:
             -  -            C      g  g c 
ucucaagcuguga CU GCAAAGGGAAGC CUUUCu uu u u
||||||||||||| || |||||||||||| |||||| || | g
agaguuuggcauu GG CGUUUCCCUUCG GAAAGa aa a a
             A  U            C      g  g a 


mirna_id: hsa-mir-518d
hairpin:
  c  u        c              A    CU   g  u 
uc ca gcugugac CUCUAGAGGGAAGC CUUU  Guu uc g
|| || |||||||| |||||||||||||| ||||  ||| || a
ag gu uggcauug GAGGUUUCCCUUCG GAAA  caa ag a
  a  u        C              C    -C   -  a 


mirna_id: hsa-mir-516b-1
hairpin:
       cu      A        UAA            g    g 
ucucagg  gugacc UCUGGAGG   GAAGCACUUUcu uuuu u
|||||||  |||||| ||||||||   |||||||||||| |||| g
agaguuu  cauUGG AGACUUUC   CUUCGUgaaaga aaga a
       cu      G        ---            a    a 


mirna_id: hsa-mir-518a-2
hairpin:
             g   -            C      g  g c 
ucucaagcugugg uCU GCAAAGGGAAGC CUUUCu uu u u
||||||||||||| ||| |||||||||||| |||||| || | a
agaguuuggcauu AGG CGUUUCCCUUCG GAAAGa aa a a
             -   U            C      g  g a 


mirna_id: hsa-mir-517c
hairpin:
gaaga              C       U   A    U    guugu 
     ucucaggcagugac CUCUAGA GGA GCAC GUCU     c
     |||||||||||||| ||||||| ||| |||| ||||     u
     agaguuugucauUG GAGAUUU CCU CGUG UAga     a
cuaaa              U       U   A    C    aaaga 


mirna_id: hsa-mir-520h
hairpin:
     u  u     cc        -        uc     guugu 
uccca gc gugac  ucuagagg aagcacuu  uguuu     c
||||| || |||||  |||||||| ||||||||  |||||     u
agggu ug cauUG  AGAUUUCC UUCGUGAA  ACAaa     g
     u  u     --        C        --     aaaga 


mirna_id: hsa-mir-521-1
hairpin:
     g  u     c   c         aa u    guug  u 
ucuca gc gugac cuc aaagggaag  c uucu    uc a
||||| || ||||| ||| |||||||||  | ||||    || a
agagu ug cauUG GAG UUUCCCUUC  G AAga    ag a
     g  c     U   A         AC C    --aa  a 


mirna_id: hsa-mir-522
hairpin:
      -  u   u c            G  C     Guug  u 
ucucag gc gug c CUCUAGAGGGAA CG UUUCU    uc g
|||||| || ||| | |||||||||||| || |||||    || a
agaguu cg cau G GAGAUUUCCCUU GU AAAga    ag a
      u  -   U U            G  A     --aa  a 


mirna_id: hsa-mir-519a-1
hairpin:
       u                 A         Guug  u 
cucaggc gugacaCUCUAGAGGGA GCGCUUUCU    uc g
||||||| ||||||||||||||||| |||||||||    || a
gaguuug cauUGUGAGAUUUUCCU CGUGAAAgg    ag a
       u                 A         --aa  a 


mirna_id: hsa-mir-527
hairpin:
             --CUG           C      guug  u 
ucucaagcuguga     CAAAGGGAAGC CUUUCu    uc a
|||||||||||||     ||||||||||| ||||||    || a
agaguuuggcauu     guuucccuucg gaaaga    ag a
             aagug           u      --aa  a 


mirna_id: hsa-mir-516a-1
hairpin:
                   C    AAA            guug  u 
ucucaggcugugaccUUCU GAGG   GAAGCACUUUCu    uc g
||||||||||||||||||| ||||   ||||||||||||    || a
agaguuuggcauUGGGAGA UUUC   CUUCGUgaaaga    ag a
                   C    ---            --aa  a 


mirna_id: hsa-mir-516a-2
hairpin:
     gg            C    AAA            guug  u 
ucuca  uugugaccUUCU GAGG   GAAGCACUUUCu    uc g
|||||  |||||||||||| ||||   ||||||||||||    || a
agagu  ggcauUGGGAGA UUUC   CUUCGUgaaaga    ag a
     uu            C    ---            --aa  a 


mirna_id: hsa-mir-519a-2
hairpin:
        u   u c     c     a         guug  u 
ucucaggc gug c cucua aggga gcgcuuucu    uc g
|||||||| ||| | ||||| ||||| |||||||||    || a
agaguuug cau G GAGAU UUCCU CGUGAAAgg    ag a
        u   U U     U     A         --aa  a 


mirna_id: hsa-mir-499a
hairpin:
         ccugu  cuu   -    c   u  UA        A          acucc 
gcccugucc     gc   ggg cggg ggc gU  AGACUUGC GUGAUGUUUa     u
|||||||||     ||   ||| |||| ||| ||  |||||||| ||||||||||     c
ugggacggg     cg   ccc gccc ucg CG  UCUGAACG CACUACAAgu     u
         uccgu  cau   u    u   U  UG        A          gcacc 


mirna_id: hsa-mir-500a
hairpin:
    c c     -U         UAC UG    AGAg   ugu 
gcuc c cucuc  AAUCCUUGC   C  GGUG    ugc   c
|||| | |||||  |||||||||   |  ||||    |||   u
cgag g gagaG  UUAGGAACG   G  CCAC    acg   g
    a c     UC         --- GU    -GUA   uaa 


mirna_id: hsa-mir-501
hairpin:
    u       -u       U U   U     AGAg   uuu 
gcuc uccucuc  AAUCCUU G CCC GGGUG    ugc   c
|||| |||||||  ||||||| | ||| |||||    |||   u
cgag gggagag  UUAGGAA C GGG CCCAC    Acg   g
    u       UC       - -   -     -GUA   uaa 


mirna_id: hsa-mir-502
hairpin:
u             -         UAU UG     UAg   ugg 
 gcucccccucucu aAUCCUUGC   C  GGUGC   ugc   c
 ||||||||||||| |||||||||   |  |||||   |||   u
 cgagggggagagA UUAGGAACG   G  CCACG   Acg   c
u             C         --- GU     -UA   uaa 


mirna_id: hsa-mir-450a-2
hairpin:
-ccaaagaaa     u       UUU     U               aa 
          gaugc aaacuau   UGCGA GUGUUCCUAAUAUgu  u
          ||||| |||||||   ||||| |||||||||||||||  a
          cuaug uuugaUA   ACGUU UACAGGGGUUAugua  u
gguauaauaa     u       CUU     U               aa 


mirna_id: hsa-mir-503
hairpin:
      A              U  G  Gu     a 
ugcccU GCAGCGGGAACAGU CU CA  gagcg u
|||||| |||||||||||||| || ||  ||||| c
augGGA CGUCGCCUUUGUUA GG Gu  cucgu g
      C              U  G  --     g 


mirna_id: hsa-mir-504
hairpin:
   -g    -            G          -A  u   u 
gcu  cugu ugggAGACCCUG UCUGCACUCU  UC gua u
|||  |||| |||||||||||| ||||||||||  || |||  
cgg  gaca acccuuugggac ggacgugagg  ag cau c
   ga    u            g          ga  u   u 


mirna_id: hsa-mir-505
hairpin:
     ac    u           G    A        ucug 
gaugc  ccag ggGGGAGCCAG AAGU UUGAUGUu    c
|||||  |||| ||||||||||| |||| ||||||||    c
cuacg  gguc cUCCUUUGGUC UUCA AACUGCga    a
     -a    u           G    C        uuug 


mirna_id: hsa-mir-513a-1
hairpin:
            uca  cauu  -  -     g        A   GG     UC        gaa 
gggaugccacau   gc    ca gc guaca ugccuUUC CAG  AGGUG  AUuuaugu   c
||||||||||||   ||    || || ||||| |||||||| |||  |||||  ||||||||    
cccuguggugua   cg    gu cg caugu augGGAAG GUC  UCCAC  UAAAUaua   u
            -ua  ucac  a  a     a        A   UU     UU        aaa 


mirna_id: hsa-mir-513a-2
hairpin:
           --u   -c   u ag      g        A   GG     UC        gaa 
ggaugccacau   cag  cau c  ugugca ugccuUUC CAG  AGGUG  AUuuaugu   c
|||||||||||   |||  ||| |  |||||| |||||||| |||  |||||  ||||||||    
ccuguggugua   guc  gua g  acaugu augGGAAG GUC  UCCAC  UAAAUaua   u
           uac   ac   c --      a        A   UU     UU        aaa 


mirna_id: hsa-mir-506
hairpin:
        ---caucag    acua  ug  g   c          A     UA    A     u 
gccaccac         ccau    ug  ua ugc uUAUUCAGGA GGUGU  CUUA uagau a
||||||||         ||||    ||  || ||| |||||||||| |||||  |||| |||||  
cgguggug         ggua    ac  gu aug GAUGAGUCUU CCACG  GAAU guuua a
        uuuacaaca    --ca  gu  a   A          C     --    -     u 


mirna_id: hsa-mir-507
hairpin:
   -    -     g  c            a    cau      guc 
gug cugu gugua ug uucacuucaaga gugc   gcaugu   u
||| |||| ||||| || |||||||||||| ||||   ||||||    
cau gaca cacgu au AAGUGAGGUUUU CACG   Uguaua   a
   a    a     a  a            C    UUU      aag 


mirna_id: hsa-mir-508
hairpin:
     --uuca  ------   -     g   c              GU  C      aaa 
ccacc      gc      uga gugua ugc cUACUCCAGAGGGC  CA UCAUGu   c
|||||      ||      ||| ||||| ||| ||||||||||||||  || ||||||    
ggugg      cg      acu cacau aug GAUGAGGUUUUCCG  GU AGUaca   u
     uuuaua  caaugc   a     a   A              AU  U      aaa 


mirna_id: hsa-mir-509-1
hairpin:
    c   -   ug    c   - UG     A   G       --g  u 
caug ugu gug  guac cUA C  CAGAC GUG CAAUCAu   ua a
|||| ||| |||  |||| ||| |  ||||| ||| |||||||   ||  
guac aca uac  caug GAU G  GUCUG CAU GUUAGUa   au a
    -   g   gu    a   G GU     -   G       aaa  u 


mirna_id: hsa-mir-510
hairpin:
   g  uc      -A    A  GG         g a 
gug ug  cUACUC  GGAG GU  CAAUCACau u a
||| ||  ||||||  |||| ||  ||||||||| |  
cac au  ggugag  ucuc ca  guuagugug a u
   a  ga      aa    -  aa         g u 


mirna_id: hsa-mir-514a-1
hairpin:
aac    u   -    g   c      -    G    A      U  aua 
   augu guc ugug uac cUACUC UGGA AGUG CAAUCA Gu   a
   |||| ||| |||| ||| |||||| |||| |||| |||||| ||    
   ugca cag acgc aug GAUGAG GUCU UCAC GUUAgu ua   u
gca    -   u    a   A      U    -    A      u  aau 


mirna_id: hsa-mir-514a-2
hairpin:
gu    -    g   c      -    G    A      U  aua 
  uguc ugug uac cUACUC UGGA AGUG CAAUCA Gu   a
  |||| |||| ||| |||||| |||| |||| |||||| ||    
  acag acgc aug GAUGAG GUCU UCAC GUUAgu ua   c
-c    u    a   A      U    -    A      u  aau 


mirna_id: osa-MIR528
hairpin:
             U   G     ca     uu   -uu     c 
agUGGAAGGGGCA GCA AGGAG  ggaga  cag   ugaag u
||||||||||||| ||| |||||  |||||  |||   ||||| g
UUACCUUCUCCGU CGU UCCuc  ucucu  guu   acuuc g
             U   G     --     cc   uuc     a 


mirna_id: osa-MIR529a
hairpin:
             a          agu     --ucacauau    au u 
gaagaagagagag guacagccuu   ucaga          gacu  c u
||||||||||||| ||||||||||   |||||          ||||  |  
CUUCUUCUCUCUC CAUGUCggaa   agucu          cuga  g u
             C          -gu     cauagcuagu    gc u 


mirna_id: osa-MIR530
hairpin:
      g  c         AC         ca  -g       u  agcagcaagcuagcaauacgugcuugaucgcu 
gugaua ag UGCAUUUGC  CUGCACCUA  ga  aggaaga ga                                a
|||||| || |||||||||  |||||||||  ||  ||||||| ||                                u
uacugu uC ACGUAGACG  GACGUGGAu  cu  uccuucu cu                                a
      a  A         GA         cc  ag       -  gguccuuguuguaacacacguucuucgaucgc 


mirna_id: osa-MIR531a
hairpin:
       c     cu      C     C        -  C 
ggcgccg cgagc  ugCUCG CGGGG UGCGUGCC GC A
||||||| |||||  |||||| ||||| |||||||| ||  
ccguggc gcucg  gcgagc gcccc acgcgcgg cg U
       a     uu      u     u        u  a 


mirna_id: hsa-mir-532
hairpin:
c a        cucuccuc  U      A    A   CC  uggca 
 g cuugcuuu        CA GCCUUG GUGU GGA  GU     u
 | ||||||||        || |||||| |||| |||  ||     c
 c gagcgaaa        GU CGGAAC CACA CCU  ca     u
u c        ----aaAC  U      C    C   CC  uuaau 


mirna_id: mmu-mir-532
hairpin:
c   uuu    u       c  U      A    A   CC  ugaca 
 aga   gcuu uucucuu CA GCCUUG GUGU GGA  GU     u
 |||   |||| ||||||| || |||||| |||| |||  ||     c
 ucu   cgaa gagaggA GU CGGAAC CACA CCU  ca     u
c   -uc    c       C  U      C    C   CC  uuaau 


mirna_id: fru-let-7h
hairpin:
ugu  U                 U     ---------    gaaga 
   gg GAGGUAGUAAGUUGUGU GUUgu         aggg     u
   || ||||||||||||||||| |||||         ||||      
   cc uuccgucauucaacaua caaua         uccc     u
--u  -                 u     gaggacuug    acgug 


mirna_id: tni-let-7h
hairpin:
aauuggcuuugcugu  U                 U      --------    au  ag 
               gg GAGGUAGUAAGUUGUGU GUUguu        gggg  ca  a
               || ||||||||||||||||| ||||||        ||||  ||   
               cc uuccgucauucaacaua caauag        uccc  gu  u
--------------u  -                 u      aggaacug    ac  gu 


mirna_id: fru-mir-223
hairpin:
----------------     a u              guucuu       uuu 
                cacuu g guauuugacaagcu      gacacuc   a
                ||||| | ||||||||||||||      |||||||   u
                gugaa C CAUAAACUGUUUGA      CUGUgag   a
gucuguucacugugga     C C              ------       cgc 


mirna_id: tni-mir-223
hairpin:
caggcc        a u              guguuu       u  a 
      cuucacuu g guauuugacaagcu      gacacuc gu u
      |||||||| | ||||||||||||||      ||||||| ||  
      ggagugaa C CAUAAACUGUUUGA      CUGUgag cg c
------        C C              ------       -  u 


mirna_id: fru-mir-124-3
hairpin:
     gag     u        a   ga        uaauu 
gguuu   cucuu guguucac gug  ccuugauu     u
|||||   ||||| |||||||| |||  ||||||||      
ccgaa   gagAA CGUAAGUG CGC  GGAAUuaa     c
     -ga     C        G   AC        cauaa 


mirna_id: tni-mir-124-3
hairpin:
gguuugag     u        a   ga        uaauu 
        cucuu guguucac gug  ccuugauu     u
        ||||| |||||||| |||  ||||||||      
        gagAA CGUAAGUG CGC  GGAAUuaa     c
----aaga     C        G   AC        cauaa 


mirna_id: fru-let-7e
hairpin:
    --         uU   GU         A        --------      g 
gcug  uccuugggg  GAG  AGUAGAUUG AUAGUUgu        gggguu u
||||  |||||||||  |||  ||||||||| ||||||||        ||||||  
cgac  aggaauccu  uuc  ucaucuaac uaucaaua        cuccag g
    ag         --   ug         a        gagugauu      u 


mirna_id: tni-let-7e
hairpin:
    --         cU   GU         A        --------      g 
gcug  uccuugggg  GAG  AGUAGAUUG AUAGUUgu        gggguu u
||||  |||||||||  |||  ||||||||| ||||||||        ||||||  
cgac  aggaacccu  uuc  ucaucuaac uaucaaua        cuccag g
    ag         --   ug         a        gaguguau      u 


mirna_id: fru-mir-219-2
hairpin:
--uc  a  -    U     AA           -cg  ugc 
    gg gc UGAU GUCCA  CGCAAUUCUUg   uc   c
    || || |||| |||||  |||||||||||   ||   u
    cc cg acua caggu  guguugaggac   ag   u
cagu  c  c    -     ag           caa  ugu 


mirna_id: fru-mir-101a
hairpin:
u   c gg                   a    g  cc 
 gcc u  uucaguuaucacagugcug ugcu uc  c
 ||| |  ||||||||||||||||||| |||| ||   
 cgg a  AAGUCAAUAGUGUCAUGAC AUgg ag  a
-   u gG                   -    a  cu 


mirna_id: fru-mir-222
hairpin:
u   uu         g   -     auc   ugu 
 cag  gcucaguag cag uguag   cug   a
 |||  ||||||||| ||| |||||   |||   g
 guC  UGGGUCAUC GUC ACAUC   gac   c
-   UC         G   U     GAc   uaa 


mirna_id: tni-mir-222
hairpin:
   uu         g   -     auc   ugu 
cag  gcucaguag cag uguag   cug   a
|||  ||||||||| ||| |||||   |||   g
guC  UGGGUCAUC GUC ACAUC   gac   c
   UC         G   U     GAc   uaa 


mirna_id: fru-mir-221
hairpin:
-----  -u     ug   u         auuu     ugcu 
     cc  gaacc  gca acaauguag    cugug    u
     ||  |||||  ||| |||||||||    |||||    g
     gg  UUUGG  CGU UGUUACAUC    GAcau    g
cgaua  cC     GU   C         ----     cuua 


mirna_id: tni-mir-221
hairpin:
ccu     ug   u         auuu     ugcu 
   gaacc  gca acaauguag    cugug    u
   |||||  ||| |||||||||    |||||    g
   UUUGG  CGU UGUUACAUC    GAcau    g
--C     GU   C         ----     cuua 


mirna_id: fru-mir-142a
hairpin:
       ug   c           A         Uaaacuau 
acagugc  uca cCAUAAAGUAG AAGCACUAC        u
|||||||  ||| ||||||||||| |||||||||         
ugucacg  agu gguauuucauc uuugugaug        c
       ug   a           c         ugacacau 


mirna_id: tni-mir-142a
hairpin:
gu        g               A         Uaaacucu 
  acagugca ucaucCAUAAAGUAG AAGCACUAC        u
  |||||||| ||||||||||||||| |||||||||         
  ugucaugu aguagguauuucauc uuugugaug        c
gu        g               c         ugacaccg 


mirna_id: fru-mir-9-1
hairpin:
      g c     UC               G      u  cg 
gggguu u uguua  UUUGGUUAUCUAGCU UAUGAg ga  u
|||||| | |||||  ||||||||||||||| |||||| ||  a
cccuaa a acaau  aagccaauagaucga auacuu cu  c
      g -     ga               a      -  aa 


mirna_id: tni-mir-9-1
hairpin:
caga      g c     UC               G      u  cg 
    gggguu u uguua  UUUGGUUAUCUAGCU UAUGAg ga  u
    |||||| | |||||  ||||||||||||||| |||||| ||  a
    cccuaa a acaau  aagccaauagaucga auacuu cu  c
auua      g -     ga               a      -  aa 


mirna_id: fru-mir-23a-2
hairpin:
-      --a gg           a        ----  ug 
 agcugg   g  auuccuggcag gugauuug    gc  u
 ||||||   |  ||||||||||| ||||||||    ||   
 ucgacc   C  UAGGGACCGUU CACUAaau    ug  g
g      aAC UU           A        guaa  ua 


mirna_id: tni-mir-23a-2
hairpin:
      --a gg           a        ----  ug 
agcugg   g  auuccuggcag gugauuug    gc  u
||||||   |  ||||||||||| ||||||||    ||   
ucgacc   C  UAGGGACCGUU CACUAaau    ug  g
      aAC UU           A        guaa  ua 


mirna_id: fru-mir-25
hairpin:
     ug   ag    g     uu g     u   gg ca 
gcugg  uug  aggc gagac  g gcaau gcc  c  u
|||||  |||  |||| |||||  | ||||| |||  |  c
cggcc  gac  UCUG CUCUG  C CGUUA Cgg  g  a
     gu   AG    G     UU A     -   ga ac 


mirna_id: fru-mir-17-1
hairpin:
   -u u       -CA        A  G     G   --u  u 
guc  g guauugc   AAGUGCUU CA UGCAG UAg   uc a
|||  | |||||||   |||||||| || ||||| |||   || u
cag  c caugacg   uucacgga gu acguc auc   ag g
   uu u       aca        g  a     -   cac  u 


mirna_id: tni-mir-17-1
hairpin:
   -u u       -CA        A  G     G   uacua 
guc  g guauugc   AAGUGCUU CA UGCAG UAg     u
|||  | |||||||   |||||||| || ||||| |||     g
cag  c caugacg   uucacgga gu acguc auc     u
   uu u       aca        g  a     -   cacaa 


mirna_id: fru-mir-18
hairpin:
-        --   U   UC   U    A   -  aaau 
 uugugcUA  AGG GCA  UAG GCAG UAg ug    a
 ||||||||  ||| |||  ||| |||| ||| ||    g
 aauacggu  ucc cgu  auc cguc auc ac    a
g        cu   u   ga   c    -   c  gauc 


mirna_id: fru-mir-19a
hairpin:
g   uu u  gc             --      u  aagaa 
 cag  c cu  uaguuuugcauag  uugcac ac     u
 |||  | ||  |||||||||||||  |||||| ||      
 guc  g gg  GUCAAAACGUAUC  AACGUG ug     a
-   cg u  uA             UA      U  aggag 


mirna_id: fru-mir-19b
hairpin:
           -   -      uc    uuug 
gucaguuuugc ugg uuugca  cagc    u
||||||||||| ||| ||||||  ||||    u
cAGUCAAAACG ACC AAACGU  GUcg    a
           U   U      --    cgcc 


mirna_id: tni-mir-19b
hairpin:
caaucaucguuu            -   -       ---u    uu 
            ggucaguuuugc ugg uuugcau    cagc  u
            |||||||||||| ||| |||||||    ||||   
            ucAGUCAAAACG ACC AAACGUG    gucg  g
------------            U   U       Ucgu    uu 


mirna_id: fru-mir-92-2
hairpin:
-----     g     c   a        gug a 
     caggu gggau agu gcaaugcu   c c
     ||||| ||||| ||| ||||||||   |  
     GUCCG CCCUG UCA CGUUAUgg   g u
gaugU     G     U   -        -aa g 


mirna_id: tni-mir-92-2
hairpin:
cuuccc        g    ug   a        gugu 
      auacaggu ggga  agu gcaaugcu    a
      |||||||| ||||  ||| ||||||||    c
      ugUGUCCG CCCU  UCA CGUUAUgg    u
----ga        G    GU   -        agga 


mirna_id: fru-mir-184
hairpin:
cgcucacaucu        c      a c     uaua  uuu 
           ccuuauca uuuucc g ccagc    gg   u
           |||||||| |||||| | |||||    ||    
           GGAAUAGU AAGAGG C GGUug    cc   g
----------G        C      - A     ----  uaa 


mirna_id: tni-mir-184
hairpin:
cgcucacaucu        c      a c     uauag u 
           ccuuauca uuuucc g ccagc     c u
           |||||||| |||||| | |||||     |  
           GGAAUAGU AAGAGG C GGUug     g c
----------G        C      - A     ccuaa u 


mirna_id: dre-mir-184-2
hairpin:
----     c         c      agcccagcuaacga 
    cacau uccuuauca uuuucc              u
    ||||| ||||||||| ||||||              g
    gugua GGGAAUAGU AAGAGG              g
gucg     C         C      CAGGUugccuaagu 


mirna_id: fru-let-7a-3
hairpin:
------------     U          GU         ---ugg        a 
            caggg GAGGUAGUAG  UGUAUAGUU      uggguggg u
            ||||| ||||||||||  |||||||||      ||||||||  
            guucc uuccguuauc  acauaucaa      acccgccc u
gucacucgagga     -          ug         uagugg        g 


mirna_id: tni-let-7a-3
hairpin:
------------     U          GU         --------u       gg 
            caagg GAGGUAGUAG  UGUAUAGUU         gugggau  c
            ||||| ||||||||||  |||||||||         |||||||  u
            guucc uuccauuauc  acauaucaa         cauccua  u
guaacauggaga     -          ug         uauuagacu       gg 


mirna_id: fru-mir-187
hairpin:
guggccauuuggccggg   gg                      ca  ccu 
                 cca  ggcugcaacacaggacaugggu  ug   c
                 |||  ||||||||||||||||||||||  ||    
                 ggu  CCGACGUUGUGUUCUGUGCUcg  ac   u
------------gucga   ga                      cc  ccg 


mirna_id: tni-mir-187
hairpin:
-----                      cuu  cuc 
     ggcugcaacacaggacaugggu   gc   u
     ||||||||||||||||||||||   ||    
     CCGACGUUGUGUUCUGUGCUcg   cg   g
gguga                      --c  ccc 


mirna_id: fru-mir-137
hairpin:
-     c   g       ug   --     -a   a 
 ucgac acg guauucu  ggu  ugaua  uac g
 ||||| ||| |||||||  |||  |||||  |||  
 agcug UGC CAUAAGA  UCG  AUUgu  gug a
g     A   G       GU   UU     ag   u 


mirna_id: tni-mir-204b
hairpin:
a      cua   a UU        UA     U    ggacu 
 ugugac   ugg c  CCCUUUGU  UCCUA GCCU     c
 ||||||   ||| |  ||||||||  ||||| ||||     a
 auacug   acc g  gggaaacg  agggu cggg     a
c      uug   c uu        gg     -    gaaaa 


mirna_id: fru-mir-458
hairpin:
-   ag       cg      uc        cag  a 
 ugc  acagcag  ccauuu  agagcuau   uc a
 |||  |||||||  ||||||  ||||||||   || c
 acg  uguCGUC  GGUAAA  UCUCGAUA   gg g
c   ga       AU      UU        -cu  u 


mirna_id: tni-mir-458
hairpin:
    ag       c       uc        cagu   a 
gugc  acggcag gccauuu  agagcuau    gcc g
||||  ||||||| |||||||  ||||||||    |||  
cacg  uguCGUC UGGUAAA  UCUCGAUA    ugg c
    ga       U       UU        ---c   g 


mirna_id: fru-mir-489
hairpin:
cuucugaua  g    ug c    ug       gc    c       acu    
         cu gugg  g uugg  gucguau  auga gucauuu   ucg 
         || ||||  | ||||  |||||||  |||| |||||||   || a
         ga cauc  c aauC  CGGCAUG  UACU CAGUGAg   agu 
-----caga  a    gu a    GU       UA    A       guu    


mirna_id: tni-mir-489
hairpin:
-----ug       cc   ug       gc    c       acu    
       guggugg  ugg  gucguau  auga gucauuu   ucg 
       |||||||  |||  |||||||  |||| |||||||   || a
       caucgcc  auC  CGGCAUG  UACU CAGUGAg   agu 
cagagaa       aa   GU       UA    A       guu    


mirna_id: dre-mir-489
hairpin:
acugacu     --g     ---c   ug             c       ---   u 
       ugagu   guggc    ugg  gucguauguauga gucauuu   acu c
       |||||   |||||    |||  ||||||||||||| |||||||   |||  
       acucg   caucg    auC  CGGCAUGUAUACU CAGUGAg   uga a
----acu     gua     ucaa   GU             A       guu   a 


mirna_id: fru-mir-192
hairpin:
ugg      -a    AU A     -          C   uaacu 
   gacgug  ggug  G CCUAU GAAUUGACAG Cag     g
   ||||||  ||||  | ||||| |||||||||| |||      
   uugcau  ucac  c ggaug cuugacuguc guc     g
---      cg    -- -     u          c   uccga 


mirna_id: tni-mir-192
hairpin:
------c   a   gA  A     -          C   uaacu 
       acg ggu  UG CCUAU GAAUUGACAG Cag     g
       ||| |||  || ||||| |||||||||| |||      
       ugc ucg  ac ggaug cuugacuguc guc     g
cccugcc   g   uc  c     u          c   uccga 


mirna_id: fru-mir-194
hairpin:
-cg   g U         AC     G     g  gu 
   cug a GUAACAGCA  UCCAU UGGaa cu  a
   ||| | |||||||||  ||||| ||||| ||  u
   gac u cauugucgu  aggug accuu ga  g
aga   g c         ga     -     -  gu 


mirna_id: tni-mir-194
hairpin:
----gcg g   g U         AC     G     -  ug 
       c cug a GUAACAGCA  UCCAU UGGaa gc  u
       | ||| | |||||||||  ||||| ||||| ||  a
       g gac u cauugucgu  aggug accuu ug  u
ccaccua a   g c         ga     -     g  ug 


mirna_id: tni-mir-142b
hairpin:
       ug   c           A         UAaacguc 
acagugc  uca cCAUAAAGUAG AAGCACUAC        u
|||||||  ||| ||||||||||| |||||||||         
ugucacg  agu gguauuucauc uuugugaug        u
       ug   a           c         ugacacau 


mirna_id: fru-mir-30b
hairpin:
u      u     g U       U   A A       gugau  u 
 uccggc caguu g GUAAACA CCU C CUCAGCU     cc u
 |||||| ||||| | ||||||| ||| | |||||||     || u
 aggucg gucaa u cauuugu gga g gagucgg     gg g
-      -     g u       u   a a       -agac  c 


mirna_id: tni-mir-30b
hairpin:
---  au   ----       U   A A       ---   auc 
   ag  ggU    GUAAACA CCU C CUCAGCU   gug   u
   ||  |||    ||||||| ||| | |||||||   |||   u
   uc  uca    cauuugu gga g gagucgg   cgc   u
agg  gg   aguu       u   a a       aga   cgu 


mirna_id: fru-mir-30d
hairpin:
u   cau   a   u    cU         CCC           -g  a 
 gca   ggc guu gagg  GUAAACAUC   GACUGGAAGcu  uc c
 |||   ||| ||| ||||  |||||||||   |||||||||||  || u
 cgu   ccg cag cucc  cauuuguag   cugacuuucga  ag c
u   ccu   c   c    ac         --u           ga  a 


mirna_id: tni-mir-30d
hairpin:
u   a   u    cU         CCC           g cac 
 ggc guu gagg  GUAAACAUC   GACUGGAAGcu u   u
 ||| ||| ||||  |||||||||   ||||||||||| |    
 ccg cag cucc  cauuuguag   cugacuuucga a   c
u   c   c    cc         --u           g cga 


mirna_id: fru-mir-27b
hairpin:
-   ca             auug        u  uug 
 agg  cagagcuuagcug    gugaacag ga   a
 |||  |||||||||||||    |||||||| ||   u
 ucc  GUCUUGAAUCGGU    CACUUguu cu   u
g   AC             --GA        u  ccu 


mirna_id: fru-mir-23b
hairpin:
       a  --          -  c      gugac 
ggcugug gg  guuccuggcg ug ugauuu     u
||||||| ||  |||||||||| || ||||||     u
ccgacac CC  UAGGGACCGU AC ACUAaa     a
       A  AU          U  -      auagu 


mirna_id: tni-mir-23b
hairpin:
   u   a  --          -  c      gugac 
ggc gug gg  guuccuggcg ug ugauuu     c
||| ||| ||  |||||||||| || ||||||     u
ccg cac CC  UAGGGACCGU AC ACUAaa     a
   c   A  AU          U  -      auagu 


mirna_id: fru-mir-196a-2
hairpin:
ucga ug   U  GU             U   gucca 
    g  guu AG  AGUUUCAUGUUGU GGG     u
    |  ||| ||  ||||||||||||| |||      
    c  uaa uc  ucaaaguacaacg cuc     u
accc gu   u  ug             u   aaacu 


mirna_id: fru-mir-126
hairpin:
cggcc           u       c cuaugc 
     cauuauuacuu ugguacg g      c
     ||||||||||| ||||||| |      a
     GUAAUAAUGAG GCCAUGC c      c
----C           U       U aacucu 


mirna_id: fru-mir-199-3
hairpin:
--------c    cg   u  c  C       U        C      u aga 
         uccc  ucc gc ug CCAGUGU CAGACUAC UGUUCa c   c
         ||||  ||| || || ||||||| |||||||| |||||| |    
         aggg  ggg cg au gguuaca gucugaug acaagu g   u
cgcacacac    uu   u  a  u       c        -      c aaa 


mirna_id: tni-mir-199-3
hairpin:
-------c    c -    c  C       U        C      u aga 
        ccca c cugc ug CCAGUGU CAGACUAC UGUUCa c   c
        |||| | |||| || ||||||| |||||||| |||||| |    
        gggu g gacg au gguuaca gucugaug acaagu g   u
cacacaca    u a    u  u       c        -      c aac 


mirna_id: fru-mir-148
hairpin:
c        -              a    ua    cua u 
 uuuccaaa uaaaguucugugau cacu  gacu   g u
 |||||||| |||||||||||||| ||||  ||||   | c
 gaggguuu GUUUCAAGACAUUA GUGA  CUga   c c
u        U              C    --    -cg u 


mirna_id: tni-mir-148
hairpin:
                 a    uc    c   u 
aaauaaaguucugugau cacu  gacu uga u
||||||||||||||||| ||||  |||| |||  
uuUGUUUCAAGACAUUA GUGA  CUga gcu c
                 C    --    c   c 


mirna_id: fru-mir-10b-1
hairpin:
au      -   G     C          ----      
  auaUAC CCU UAGAA CGAAUUUGUG    ugaug 
  |||||| ||| ||||| ||||||||||    |||| g
  uauaug ggg aucuu gcuuagacac    acugc 
--      a   g     a          ugaa      


mirna_id: tni-mir-10b-2
hairpin:
au      -   G     C         ----       
  auaUAC CCU UAGAA CGAAUUUGU    Gugauc 
  |||||| ||| ||||| |||||||||    ||||| a
  uauaug ggg aucuu gcuuagaca    cacuga 
--      a   g     a         cuga       


mirna_id: fru-mir-205
hairpin:
---   g uc  UC      U    C        ua  ug 
   ugu u  ua  CUUCAU CCAC GGAGUCUG  ug  u
   ||| |  ||  |||||| |||| ||||||||  ||   
   aca a  au  gaagug ggug cuuuagac  au  a
ggu   g ga  gu      u    a        ca  uu 


mirna_id: tni-mir-205
hairpin:
----  UC      U    C        uaacug 
    ua  CUUCAU CCAC GGAGUCUG      u
    ||  |||||| |||| ||||||||       
    au  gaagug ggug cuuuagac      u
gaga  gu      u    a        caauuu 


mirna_id: fru-mir-365
hairpin:
--------ca      aa        ac           -----    u   u 
          gcaaga  agugaggg  uuuuaggggca     gcug guu u
          ||||||  ||||||||  |||||||||||     |||| ||| a
          cguucu  uUAUUCCU  AAAAUCCCCGU     ugac caa u
caacuguuaa      cg        -A           AAUac    c   u 


mirna_id: tni-mir-365
hairpin:
-----ca      aa        ac           -----    u   u 
       gcaaga  agugaggg  uuuuaggggca     gcug guu u
       ||||||  ||||||||  |||||||||||     |||| ||| a
       cguucu  uUAUUCCU  AAAAUCCCCGU     ugac caa u
cuguuaa      cg        -A           AAUac    c   u 


mirna_id: fru-mir-193
hairpin:
-------  u      ag     u     cg   aaggugaguccu 
       ug gucaga  cuggg cuuug  ggc            c
       || ||||||  ||||| |||||  |||            a
       ac cggucu  GACCC GAAAC  CCG            g
ccaaugc  u      cU     U     AU   GUCAAcuuguuu 


mirna_id: tni-mir-193
hairpin:
------------    a      u     cg   aaggugaguccu 
            caga gcuggg cuuug  ggc            c
            |||| |||||| |||||  |||            a
            gucu UGACCC GAAAC  CCG            g
ccagugcacucg    g      U     AU   GUCAAcuuguuu 


mirna_id: fru-mir-124-1
hairpin:
gguugu      cc        a   ga        -   u 
      gucucu  guguucac gcg  ccuugauu uaa g
      ||||||  |||||||| |||  |||||||| |||  
      uagagA  CGUAAGUG CGC  GGAAUuaa auu u
------      AC        G   AC        c   c 


mirna_id: tni-mir-124-1
hairpin:
    cc        a   ga        -   u 
cucu  guguucac gcg  ccuugauu uaa g
||||  |||||||| |||  |||||||| |||  
gagA  CGUAAGUG CGC  GGAAUuaa auu u
    AC        G   AC        c   c 


mirna_id: fru-mir-217
hairpin:
augaagagc   c ug    g  u a  C         A    A    c   ug 
         cuu u  augc ga g UA UGCAUCAGG ACUG UUGG uga  c
         ||| |  |||| || | || ||||||||| |||| |||| |||   
         gaa a  uacg cu c gu acguagucc ugac aacc auu  u
--------a   - gu    a  u c  u         a    -    c   uu 


mirna_id: tni-mir-217
hairpin:
--uc ug    g  u a  C         A    A    ---      
    u  augu ga g UA UGCAUCAGG ACUG UUGG   cugau 
    |  |||| || | || ||||||||| |||| ||||   |||| g
    a  uacg cu c gu acguagucc ugac aacc   gauuc 
agaa gu    a  u c  u         a    -    cau      


mirna_id: fru-mir-216a
hairpin:
u     A        CU   AAC      --uc  uc 
 uggua AAUCUCAG  GGC   UGUGAg    gu  a
 ||||| ||||||||  |||   ||||||    ||   
 aucgu uuaggguc  ccg   acacuc    cg  c
a     a        -u   gua      ucgu  au 


mirna_id: tni-mir-216a
hairpin:
u     A        CU   AAC      --uc  uc 
 uggug AAUCUCAG  GGC   UGUGAg    gu  a
 ||||| ||||||||  |||   ||||||    ||   
 aucgu uuaggguc  ccg   acacuc    cg  c
a     a        -u   gua      ucgu  au 


mirna_id: fru-mir-216b
hairpin:
--u      uU       G    CAAC     ug      
   gacugu  AAUCUCU CAGG    UGUGA  guguu 
   ||||||  ||||||| ||||    |||||  |||| u
   uugacg  uuagaga gucc    acacu  uauau 
uau      uc       g    acua     cu      


mirna_id: tni-mir-216b
hairpin:
--u      uU       G    CAAC     ug      
   gacugu  AAUCUCU CAGG    UGUGA  gugau 
   ||||||  ||||||| ||||    |||||  |||| u
   uugacg  uuagaga gucc    acacu  uauuu 
uau      uc       g    acua     cu      


mirna_id: fru-let-7i
hairpin:
c    U                 U   --------   u    u u 
 uggc GAGGUAGUAGUUUGUGC GUU        ggu gggu g g
 |||| ||||||||||||||||| |||        ||| |||| | a
 aucg uuccgucaucgaacgcg cag        ucg cccg c c
-    -                 u   uagaggua   -    u a 


mirna_id: fru-mir-10b-2
hairpin:
         a   AC        AC  A       uga     
guugucuau ugU  CCUGUAGA  CG AUUUGUG   guuc 
||||||||| |||  ||||||||  || |||||||   ||| c
caacgggua aua  ggacaucu  gc ugaacgc   caga 
         c   -a        cu  a       uga     


mirna_id: tni-mir-10b-1
hairpin:
         a   AC        AC  A       uga  u 
guugucuau ugU  CCUGUAGA  CG AUUUGUG   gu c
||||||||| |||  ||||||||  || |||||||   ||  
caacgggua aua  ggacaucu  gc ugaacac   ca a
         c   -a        cu  a       uga  g 


mirna_id: fru-mir-196a-1
hairpin:
     ga        U          A          gau    
agcug  gcgugguu AGGUAGUUUC UGUUGUUGGG   ggc 
|||||  |||||||| |||||||||| ||||||||||   || u
uugac  ugcauuag uccgucaaag acaacggcuc   ccu 
     --        u          a          ggu    


mirna_id: tni-mir-196a-1
hairpin:
----------------     ga        U          A          gau    
                agcug  gcgugguu AGGUAGUUUC UGUUGUUGGG   ggc 
                |||||  |||||||| |||||||||| ||||||||||   || u
                uugac  ugcauuag uccgucaaag acaacggcuc   ccu 
cgggaacuacuucugc     --        u          a          ggu    


mirna_id: fru-mir-429
hairpin:
ccuguu   a     cu         ug        uaau 
      gau ggcgu  uaccagaca  guuagaug    u
      ||| |||||  |||||||||  ||||||||     
      cUG CCGUA  AUGGUCUGU  UAAUcugu    a
---uac   -     --         CA        uguu 


mirna_id: tni-mir-429
hairpin:
a   ug     a    u -          ug        uaau 
 gcc  uugau ggcg c uuaccagaca  guuagaug    u
 |||  ||||| |||| | ||||||||||  ||||||||     
 cgg  aauua cUGC G AAUGGUCUGU  UAAUcugu    a
a   ua     c    C U          CA        uguu 


mirna_id: fru-mir-200a
hairpin:
---u       uc    -     c       c    uugu  u 
    cucagga  cauc uuacc gacagug ugga    ac a
    |||||||  |||| ||||| ||||||| ||||    ||  
    gggucuu  GUAG AAUGG CUGUCAC AUcu    ug c
cagu       uU    C     U       A    -ugu  u 


mirna_id: tni-mir-200a
hairpin:
--    -     u       c    uuau  u 
  cauc uuacc gacagug ugga    ac a
  |||| ||||| ||||||| ||||    ||  
  GUAG AAUGG CUGUCAC AUcu    ug c
uU    C     U       A    -ugu  u 


mirna_id: fru-mir-200b
hairpin:
ggu       uc   cu   g      c      uauca 
   gauuauc  cau  uac aggcag auugga     u
   |||||||  |||  ||| |||||| ||||||     c
   cuaguAG  GUA  AUG UCCGUC UAAUcu     a
--g       UA   --   G      A      cuuuc 


mirna_id: tni-mir-200b
hairpin:
-----------------c    -    g      c      --u  c 
                  cauc uuac aggcag auugga   ag a
                  |||| |||| |||||| ||||||   || u
                  GUAG AAUG UCCGUC UAAUcu   uc c
ggacgucugcugcuaguA    U    G      A      uuu  a 


mirna_id: fru-mir-218b
hairpin:
    a  -   UU       AUC        CA ug a 
cagg cc cca  GUGCUUG   UAACCAUG  g  c u
|||| || |||  |||||||   ||||||||  |  | c
guuc gg ggu  cacgaac   guugguac  u  g g
    -  a   uc       cgu        -c gu u 


mirna_id: tni-mir-218b
hairpin:
    a  -   UU       AUC        ----   ug 
cagg cc cca  GUGCUUG   UAACCAUG    CAg  c
|||| || |||  |||||||   ||||||||    |||   
guuc gg ggu  cacgaac   guugguac    guc  g
    -  a   uc       cgu        cugu   cu 


mirna_id: fru-mir-301
hairpin:
cagc    u       ---        a   uacca 
    ugcu ugacaau   guugcacu cug     u
    |||| |||||||   |||||||| |||      
    acGA ACUGUUA   UAACGUGA gau     c
---u    U       UGA        C   cuuac 


mirna_id: tni-mir-301
hairpin:
       c    c       ---        a   uacca 
aggucag ugcu ugacaau   guugcacu cug     u
||||||| |||| |||||||   |||||||| |||      
uccgguu acGA ACUGUUA   UAACGUGA gau     c
       u    U       UGA        C   cuuac 


mirna_id: fru-mir-130
hairpin:
uguuguu u  uc         uc        ca  g a a 
       g cc  ugcccuuuu  uguugcac  cu g c c
       | ||  |||||||||  ||||||||  || | | u
       c gg  ACGGGAAAA  AUAACGUG  ga u g g
-----gu -  uU         UU        AC  g a a 


mirna_id: tni-mir-130
hairpin:
uguugu  uc         uc        ca  g a a 
      cc  ugcccuuuu  uguugcac  cu g c c
      ||  |||||||||  ||||||||  || | | u
      gg  ACGGGAAAA  AUAACGUG  ga u g g
-----c  uU         UU        AC  g a a 


mirna_id: fru-let-7a-2
hairpin:
   U   GU                ---------uu    u 
ggg GAG  AGUAGGUUGUAUAGUU           aggg u
||| |||  ||||||||||||||||           |||| a
ucc uuc  ucauucaacauaucaa           uccc u
   u   ug                uagacuguccu    a 


mirna_id: tni-let-7a-2
hairpin:
guccuuug   U   GU                ---------uu    u 
        ggg GAG  AGUAGGUUGUAUAGUU           aggg u
        ||| |||  ||||||||||||||||           |||| a
        ucc uuc  ucauucaacauaucaa           uccc u
--------   u   ug                uagacuguccu    a 


mirna_id: fru-mir-122
hairpin:
      GG       C           uuucc 
agcuaU  AGUGUGA AAUGGUGUUUG     u
||||||  ||||||| |||||||||||      
ucgaua  ucacacu uuaccgcaaac     u
      aa       a           uuucu 


mirna_id: tni-mir-122
hairpin:
      GG       C           ugucc 
agcugU  AGUGUGA AAUGGUGUUUG     u
||||||  ||||||| |||||||||||      
ucgaua  ucacacu uuaccgcaaac     u
      aa       a           uuucu 


mirna_id: fru-mir-218a-1
hairpin:
    u      U         CU          ccc   c 
cggc gucucU GUGCUUGAU  AACCAUGUGg   cgc u
|||| |||||| |||||||||  ||||||||||   ||| a
gucg caggga cgcgaacug  uugguacacu   gug u
    c      c         cc          aca   u 


mirna_id: tni-mir-218a-1
hairpin:
    u      U         CU          ccc   c 
cggc gucucU GUGCUUGAU  AACCAUGUGg   cgc u
|||| |||||| |||||||||  ||||||||||   ||| a
gucg caggga cgcgaacug  uugguacacu   gug u
    c      c         cc          aaa   u 


mirna_id: fru-let-7d
hairpin:
u   -        u U   G   UU            -  gcauaaua 
 gug cucugcag g GAG UAG  GGUUGUAUGGUU uc        a
 ||| |||||||| | ||| |||  |||||||||||| ||        a
 cac gaggcguc c uuc auc  ccaacaugucaa ag        c
-   u        c u   g   uu            u  aggcacga 


mirna_id: fru-mir-9-2
hairpin:
   g   UC               ---GU      g 
guu uua  UUUGGUUAUCUAGCU     AUGAgu u
||| |||  |||||||||||||||     |||||| u
caa aau  aagccaauagaucga     ugcucg c
   a   ga               aauac      u 


mirna_id: fru-mir-460
hairpin:
--    uc ug       ca a      aaa   u 
  cagu  c  cauugua  c cugugc   uca u
  ||||  |  |||||||  | ||||||   |||  
  gucG  G  GUAACAU  G GACACg   ggu u
gu    UA GU       AC C      -aa   c 


mirna_id: tni-mir-460
hairpin:
--    uc ug       ca a      aaa   a 
  cagu  c  cauugua  c cugugc   uca u
  ||||  |  |||||||  | ||||||   |||  
  gucG  G  GUAACAU  G GACACg   ggu u
gu    UA GU       AC C      -aa   c 


mirna_id: fru-mir-21
hairpin:
u    a        U       G     G  -  ua 
 guca aUAGCUUA CAGACUG UGUUG Cu gu  a
 |||| |||||||| ||||||| ||||| || ||  g
 cagu ugucggau gucugac acagc ga cg  a
a    c        -       a     g  a  uu 


mirna_id: tni-mir-21
hairpin:
auugucgucuuuacaucugucacu     cc     a       A        G     G  -  ua 
                        cucgg  uguca aUAGCUU UCAGACUG UGUUG Cu gu  a
                        |||||  ||||| ||||||| |||||||| ||||| || ||  g
                        gggcu  acagu ugucgga agucugac acagc ga cg  a
-------------ucuacuuucuc     uu     c       -        a     g  a  uu 


mirna_id: fru-mir-153b
hairpin:
----     c      -           gu -       --   ac 
    caucu ccagug ucauuuuugug  u ugcagcu  agu  u
    ||||| |||||| |||||||||||  | |||||||  |||   
    gugga gguuaC AGUAAAAACAC  A ACGUUga  ucg  c
cagu     c      G           UG U       cc   gu 


mirna_id: fru-mir-199-2
hairpin:
cc     C       U        C   U   gaag 
  gccug CCAGUGU CAGACUAC UGU Cag    u
  ||||| ||||||| |||||||| ||| |||     
  cggau gguuaca gucugaug aca guu    a
gu     u       c        -   u   ggug 


mirna_id: fru-mir-181b
hairpin:
--aaa  u    aucAA         CUG           aa  g 
     gg caca     CAUUCAUUG   UCGGUGGGuuu  cu u
     || ||||     |||||||||   |||||||||||  ||  
     cc gugu     guaaguagc   agucacucgag  gg a
uagac  u    -caac         --a           aa  u 


mirna_id: fru-mir-181a-1
hairpin:
gcuc   c   u A   U      CU       A    gag  a 
    gcc cgg g ACA UCAACG  GUCGGUG GUuu   cu a
    ||| ||| | ||| ||||||  ||||||| ||||   || a
    cgg gcc C UGU AGUUGC  CAGCUAC CAaa   gg u
----   u   C A   U      --       -    -aa  u 


mirna_id: tni-mir-181a-1
hairpin:
gcuc   c   u A   U      CU       A    gag  a 
    gcc cgg g ACA UCAACG  GUCGGUG GUuu   cc a
    ||| ||| | ||| ||||||  ||||||| ||||   || a
    cgg gcc C UGU AGUUGC  CAGCUAC CAaa   gg u
----   u   C A   U      --       -    -aa  u 


mirna_id: fru-mir-338
hairpin:
ggauu             c   -         ccu    cacu 
     cucccugcaacaa auc cuggugcug   gagu    u
     ||||||||||||| ||| |||||||||   ||||    u
     ggggggcGUUGUU UAG GACUACGAC   CUca    c
-----             U   U         ---    aaca 


mirna_id: fru-mir-7
hairpin:
cccu     c      g   A     A       U      uuu    a 
    gucug ugcugu UGG AGACU GUGAUUU GUUguu   aguu g
    ||||| |||||| ||| ||||| ||||||| ||||||   |||| a
    cggac acgaca acc ucuga cacuaaa caacag   ucaa u
----     -      a   g     -       -      ---    c 


mirna_id: tni-mir-7
hairpin:
------U       U        U    U ug  gu 
       GGAAGAC AGUGAUUU GUUG u  gu  c
       ||||||| |||||||| |||| |  ||   
       ccuucug uuacuaaa caac a  ua  a
cgucacu       -        -    - gu  aa 


mirna_id: fru-mir-153a
hairpin:
      -             gu       -a  aa 
ccagug ucauuuuugugau  ugcagcu  gu  u
|||||| |||||||||||||  |||||||  ||  a
gguuaC AGUGAAAACACUG  ACGUUga  cg  u
      U             AU       cc  ag 


mirna_id: tni-mir-153a
hairpin:
      -        u     gu       -a  aa 
ccagug ucauuuuu gugau  ugcagcu  gu  u
|||||| |||||||| |||||  |||||||  ||  a
gguuaC AGUGAAAA CACUG  ACGUUga  cg  u
      U        -     AU       ac  aa 


mirna_id: fru-let-7j
hairpin:
gucU         U           ugagggucugugauu 
    GAGGUAGUU UUUGUACAGUU               c
    ||||||||| |||||||||||               u
    uuccgucag gaacaugucaa               g
-ccg         u           ucgaggacauacccc 


mirna_id: dre-let-7j
hairpin:
   U        U            --------uu      cu u 
ggu GAGGUAGU GUUUGUACAGUU          uagggu  g u
||| |||||||| ||||||||||||          ||||||  | a
ccg uuccguca cagacaugucaa          gucccg  c u
   -        u            ucgaggaauu      -u u 


mirna_id: fru-let-7b
hairpin:
     U                     uca  g  g    uuu 
caggg GAGGUAGUAGGUUGUGUGGUU   gg uu ugau   g
||||| |||||||||||||||||||||   || || ||||    
guccc uuccgucauccaacauaucaa   uc ag acua   c
     -                     ---  g  g    ccc 


mirna_id: fru-mir-128-2
hairpin:
----- a           uua      ca     g ag 
     g agagggggccg   cacugu  gagau u  u
     | |||||||||||   ||||||  ||||| |  c
     c UUUUCUCUGGC   GUGACA  CUcug g  u
gucgu c           CAA      --     g ag 


mirna_id: tni-mir-128-2
hairpin:
---g    --        uua      ca     g ag 
    agga  gggggccg   cacugu  gagau u  u
    ||||  ||||||||   ||||||  ||||| |  c
    uccU  UCUCUGGC   GUGACA  CUcug g  u
gucg    UU        CAA      --     g ag 


mirna_id: fru-mir-144
hairpin:
      c  g          a       -a    au 
ccugga ag auaucaucua uacugua  guuu  u
|||||| || |||||||||| |||||||  ||||  a
ggaccu UC UGUAGUAGAU AUGACAU  caga  a
      a  A          -       ca    ga 


mirna_id: tni-mir-144
hairpin:
c      c  g         u        -a   uaa 
 ccugga ag auaucaucu auacugua  guu   u
 |||||| || ||||||||| ||||||||  |||   a
 ggaccu UC UGUAGUAGA UAUGACAU  cag   a
-      a  A         -        ca   uga 


mirna_id: fru-mir-30c
hairpin:
--     a          -   UA          guc    c 
  ucagg agUGUAAACA UCC  CACUCUCGGc   cgcc c
  ||||| |||||||||| |||  ||||||||||   ||||  
  agucc ucacguuugu agg  gugggggccg   gugg c
uc     g          c   --          ---    u 


mirna_id: tni-mir-30c
hairpin:
-u     g          -   UA          guc    c 
  ucagg agUGUAAACA UCC  CACUCUCGGc   cgcc c
  ||||| |||||||||| |||  ||||||||||   ||||  
  ggucc ucacguuugu agg  gugggggccg   gugg c
uc     g          c   --          ---    u 


mirna_id: fru-mir-140
hairpin:
---   A             A      gu    uc 
   guC GUGGUUUUACCCU UGGUAG  gaca  a
   ||| ||||||||||||| ||||||  ||||   
   cag caccaagauggga accauc  uugu  u
ggg   g             c      --    cg 


mirna_id: fru-mir-124-2
hairpin:
cuggu     cuc        a   ga        uaaau 
     cucuc   guguucac gcg  ccuugauu     g
     |||||   |||||||| |||  ||||||||     u
     gagag   CGUAAGUG CGC  GGAAUuaa     c
-----     AAC        G   AC        cauac 


mirna_id: tni-mir-124-2
hairpin:
gc     cuc        a   ga        uaaau 
  cucuc   guguucac gcg  ccuugauu     g
  |||||   |||||||| |||  ||||||||     u
  gagag   CGUAAGUG CGC  GGAAUuaa     c
--     AAC        G   AC        cauac 


mirna_id: fru-mir-214
hairpin:
caggaugagacu     g  g             aca            accu 
            guugu gu ugucugccugucu   cuugcugugcag    u
            ||||| || |||||||||||||   ||||||||||||    c
            cgacg ua acaGACGGACAGA   GGACGACAuguc    u
----------cc     g  g             CAC            cucg 


mirna_id: tni-mir-214
hairpin:
---------  g  g             aca            accu 
         gu gu ugucugccugucu   cuugcugugcag    u
         || || |||||||||||||   ||||||||||||    c
         cg ua acaGACGGACAGA   GGACGACAuguc    u
ucaccccga  g  g             CAC            cucg 


mirna_id: fru-mir-199-1
hairpin:
u  -   u c   auC       U        C   ---    ga 
 cc ugc c guc   CCAGUGU CAGACUAC UGU   UCag  u
 || ||| | |||   ||||||| |||||||| |||   ||||  u
 gg acg g cag   gguuaca gucugaug aca   gguc  u
-  u   u a   auu       c        -   ugu    au 


mirna_id: tni-mir-199-1
hairpin:
   -    c   caC       U        C   U    guc 
ccg gcuc guc   CCAGUGU CAGACUAC UGU Cauu   a
||| |||| |||   ||||||| |||||||| ||| ||||    
ggc cggg cag   gguuaca gucugaug aca gugg   u
   a    u   auu       c        -   u    uca 


mirna_id: fru-mir-455
hairpin:
  c   u ug  g          U      A   C   gaa 
cc ugg g  ag gUAUGUGCCC UGGACU CAU Gug   g
|| ||| |  || |||||||||| |||||| ||| |||    
gg acu c  uc cauauacggg accuga gua cac   c
  u   c gu  a          u      c   c   gac 


mirna_id: tni-mir-455
hairpin:
  c   u ug   -          U      A   C   gaa 
cc uga g  agg gUAUGUGCCC UGGACU CAU Gug   g
|| ||| |  ||| |||||||||| |||||| ||| |||    
gg acu c  uuc cauauacggg accuga gua cac   c
  a   - cu   a          u      c   c   gac 


mirna_id: fru-mir-135b
hairpin:
augcc       c            U        C   -    a 
     cagugca ugUAUGGCUUUU AUUCCUAU UGa cugu c
     ||||||| |||||||||||| |||||||| ||| ||||  
     gucgcgu acguaccgaagg uagggaua acu gaua u
-----       c            -        u   u    g 


mirna_id: tni-mir-135b
hairpin:
g         c            U        C   -  g a 
 cccagugcg ugUAUGGCUUUU AUUCCUAU UGa cu u c
 ||||||||| |||||||||||| |||||||| ||| || |  
 gggucgcgc acguaccgaagg uagggaua acu ga a u
-         c            -        u   u  g g 


mirna_id: dre-mir-135b
hairpin:
    uu    c           U        C    aa  g 
cucu  gccc gUAUGGCUUUU AUUCCUAU UGag  uu c
||||  |||| ||||||||||| |||||||| ||||  ||  
gggg  cggg cguaccgaagg uagggaua acuc  ga u
    -u    a           -        u    ag  c 


mirna_id: fru-mir-196b
hairpin:
ugugaua            A   G   GGcuga  u 
       UAGGUAGUUUCA GUU UUG      ac c
       |||||||||||| ||| |||      ||  
       guccgucaaagu caa gac      ug u
----uga            c   g   -acuag  u 


mirna_id: tni-mir-196b
hairpin:
ugugaugUA          A   G   GGcuaa  u 
         GGUAGUUUCA GUU UUG      ac u
         |||||||||| ||| |||      ||  
         ccgucaaagu caa gac      ug u
----uuagc          c   g   -acuag  g 


mirna_id: fru-mir-129-1
hairpin:
       a     -       C   CU      G  --   -  u 
guccuuc cgaau CUUUUUG GGU  GGGCUU CU  guu cu u
||||||| ||||| ||||||| |||  |||||| ||  ||| || a
caggagg guuua gaaaaac cca  cccgaa gg  uaa gg c
       c     c       c   uu      g  uc   u  u 


mirna_id: tni-mir-129-1
hairpin:
       a     -       C   CU      G   uucuc 
guccuuc cgaau CUUUUUG GGU  GGGCUU CUg     u
||||||| ||||| ||||||| |||  |||||| |||     g
cgggggg guuua gaaaaac cca  cccgaa ggc     c
       c     c       c   uu      -   ccacu 


mirna_id: fru-mir-26
hairpin:
--a    u gg     UU         C           -  ua 
   ggcc c  ccugg  CAAGUAAUC AGGAUAGGCUg gu  a
   |||| |  |||||  ||||||||| ||||||||||| ||  c
   ccgg g  ggacu  guucauuag ucuuauccggc cg  c
gug    u aa     gu         u           a  uc 


mirna_id: tni-mir-26
hairpin:
  guua    u gg     UU         C           -  ua 
gc    ggcc c  ccugg  CAAGUAAUC AGGAUAGGCUg gu  a
||    |||| |  |||||  ||||||||| ||||||||||| ||  c
cg    ccgg g  ggacu  guucauuag ucuuauccggc cg  c
  accg    u aa     gu         u           a  uc 


mirna_id: fru-mir-101b
hairpin:
--  -a      c                    c c    g  uc 
  ug  acuguc auuuucaguuaucaugguac g ugcu ug  c
  ||  |||||| |||||||||||||||||||| | |||| ||  c
  ac  ugacgg uaGAAGUCAAUAGUAUCAUG C AUga ac  u
cu  cg      u                    A -    -  uc 


mirna_id: tni-mir-101b
hairpin:
--  -a      c                    c c    g  uc 
  ug  acuguc auuuucgguuaucaugguac g ugcu ug  c
  ||  |||||| |||||||||||||||||||| | |||| ||  c
  ac  ugacgg uaGAAGUCAAUAGUAUCAUG C AUga ac  u
cu  cg      u                    A -    -  uc 


mirna_id: fru-mir-9-4
hairpin:
-          u   C       A       G     guuua 
 ggguuaguuu uaU UUUGGUU UCUAGCU UAUGA     u
 |||||||||| ||| ||||||| ||||||| |||||      
 cuuaaucaaa aug aagccaa agaucga auacu     g
c          u   u       g       a     auaau 


mirna_id: tni-mir-9-4
hairpin:
-          u   C       A       G     guuua 
 ggguuaguuu uaU UUUGGUU UCUAGCU UAUGA     u
 |||||||||| ||| ||||||| ||||||| |||||      
 cuuaaucaaa aug aagccaa agaucga auacu     g
c          c   u       g       a     auaau 


mirna_id: tni-mir-181b-2
hairpin:
gcu    auaAA         CU           ucca 
   cgca     CAUUCAUUG  GUCGGUGGGuu    u
   ||||     |||||||||  |||||||||||    g
   gcgu     guaaguaac  cagucgcucga    g
--g    cagaa         --           uaac 


mirna_id: fru-mir-103
hairpin:
    c    --uu     u  u           c   -u ua 
cucu cgcu    uagcc cu uacagugcugc uug  c  a
|||| ||||    ||||| || ||||||||||| |||  |  u
gaga gcga    AUCGG GA AUGUUACGACG Aac  g  c
    u    cAGU     -  C           -   uu ua 


mirna_id: tni-mir-103
hairpin:
uug         --uu     u  u           c   cu ua 
   cucuacgcu    uagcc cu uacagugcugc uug  c  c
   |||||||||    ||||| || ||||||||||| |||  |  u
   gagaugcga    AUCGG GA AUGUUACGACG Aac  g  c
---         cAGU     -  C           -   uu ua 


mirna_id: fru-mir-107
hairpin:
-      c   u    --   u  u           c   - g    
 uucugu ugc guga  gcu cu uacaguguugc uug u gca 
 |||||| ||| ||||  ||| || ||||||||||| ||| | || u
 gagaca acg cACU  CGG GA AUGUUACGACG Aac a cgg 
c      c   c    AU   -  C           -   u g    


mirna_id: tni-mir-107
hairpin:
-----     c   u    --   u  u           c   - g    
     ucugu ugc guga  gcu cu uacaguguugc uug u gca 
     ||||| ||| ||||  ||| || ||||||||||| ||| | || u
     agaca acg cACU  CGG GA AUGUUACGACG Aac a cgg 
cgucg     c   c    AU   -  C           -   u g    


mirna_id: fru-mir-22b
hairpin:
     cu     uc        -     u       -----u   c 
guugc  cacag  guucuuca cuggc agcuuua      guc u
|||||  |||||  |||||||| ||||| |||||||      |||  
caaug  guguU  CGAGAAGU GACCG UCGAAau      cag c
     -u     GU        U     -       cguacc   u 


mirna_id: tni-mir-22b
hairpin:
     cu     uc        -     u       -   ccuc 
guugc  cacag  guucuuca cuggc agcuuua ugu    c
|||||  |||||  |||||||| ||||| ||||||| |||    g
caaug  guguU  CGAGAAGU GACCG UCGAAau gca    a
     -u     GU        U     -       c   cccc 


mirna_id: fru-mir-212
hairpin:
g     c  a   -aca  u     c       c      cuaaaacc 
 gucag gc uca    cc uggcu uagacug uuacug        g
 ||||| || |||    || ||||| ||||||| ||||||        c
 caguc cg agu    GG ACUGA AUCUGAC AAUgac        u
-     -  c   caUC  U     C       -      augaauac 


mirna_id: tni-mir-212
hairpin:
g     c  a   -aca  u     c       c      c  --a  cc 
 gucag gc uca    cc uggcu uagacug uuacug ua   ca  g
 ||||| || |||    || ||||| ||||||| |||||| ||   ||   
 cgguc cg agu    GG ACUGA AUCUGAC AAUgac au   gu  c
-     -  c   caUC  U     C       -      -  gaa  cu 


mirna_id: dre-mir-212
hairpin:
     u  a   a  -  u     c       c      c  aa gug 
gucag gc uca ua cc uggcu uagacug uuacug ua  u   u
||||| || ||| || || ||||| ||||||| |||||| ||  |    
cgguc ug agu aU GG ACUGA AUCUGAC AAUgac au  a   c
     -  c   c  C  U     C       -      -  ga agu 


mirna_id: tni-mir-181a-2
hairpin:
caguuuuuucaggu   ug   A           UG      A    gg gac 
              cuu  ggg ACAUUCAACGC  UCGGUG GUuu  u   u
              |||  ||| |||||||||||  |||||| ||||  |    
              gga  ucc ugugaguugcg  agcuac caaa  a   c
--------------   uu   a           --      -    aa aga 


mirna_id: dre-mir-181a-2
hairpin:
------uuggugA   U      CU       A    --    c 
             ACA UCAACG  GUCGGUG GUuu  ugcg u
             ||| ||||||  ||||||| ||||  ||||  
             ugu aguugc  cagcuac caaa  augu u
ggugggaguccca   c      --       -    ca    c 


mirna_id: fru-mir-135a
hairpin:
ug     uu U        CUAU           uuucu 
  cugug  u AUGGCUUU    UCCUAUGUGau     c
  |||||  | ||||||||    |||||||||||      
  gacau  g uaccgaaa    gggauacacug     u
ga     gg u        -ucu           uacga 


mirna_id: fru-mir-218a-2
hairpin:
g        uUU         CU        Gg ug cgggu 
 guuguucc   GUGCUUGAU  AACCAUGU  c  c     u
 ||||||||   |||||||||  ||||||||  |  |      
 cggcaagg   cacgaacug  uugguaca  g  g     c
-        uac         uc        -a gu auauu 


mirna_id: tni-mir-218a-2
hairpin:
g        uUU         CU        Ggcug   g uu 
 guuguucc   GUGCUUGAU  AACCAUGU     cca g  c
 ||||||||   |||||||||  ||||||||     ||| |  u
 cggcaagg   cacgaacug  uugguaca     ggu c  u
-        uac         uc        ----a   g ua 


mirna_id: fru-mir-29a-1
hairpin:
-aggu           uuu       -----        
     ugacugauuuc   ugguguu     cagaguc 
     |||||||||||   |||||||     |||||| c
     AUUGGCUAAAG   ACCACGA     gucuuaa 
gugac           UUU       Ucuuu        


mirna_id: tni-mir-29a-1
hairpin:
--aggu           uuu       -----        
      ugaccgauuuc   ugguguu     cagaguc 
      |||||||||||   |||||||     |||||| c
      AUUGGCUAAAG   ACCACGA     gucuuaa 
agugac           UUU       Ucuuu        


mirna_id: fru-mir-29b-2
hairpin:
-----u   a                 g  u   guauu 
      gga gcugguuucagguggug cu aga     g
      ||| ||||||||||||||||| || |||     u
      cuU UGACUAAAGUUUACCAC GA Ucu     c
gggguu   G                 -  -   aucua 


mirna_id: tni-mir-29b-2
hairpin:
-   uu   a                 g  u   guauu 
 cuc  gga gcugguuucagguggug cu aga     g
 |||  ||| ||||||||||||||||| || |||     u
 ggg  cuU UGACUAAAGUUUACCAC GA Ucu     c
g   uu   G                 -  -   aucua 


mirna_id: fru-mir-133
hairpin:
---aau  uuu    a       aa  u  a        accuc 
      gc   gcua agcuggu  aa gg accaaauc     u
      ||   |||| |||||||  || || ||||||||      
      cg   cgau UCGACCA  UU CC UGGUUUag     u
uaguuu  uau    G       AC  C  C        guaag 


mirna_id: tni-mir-133
hairpin:
ugacuccacaaugcuuu    a       aa  u  a        accuc 
                 gcua agcuggu  aa gg accaaauc     u
                 |||| |||||||  || || ||||||||      
                 cgau UCGACCA  UU CC UGGUUUag     u
---------------au    G       AC  C  C        guaag 


mirna_id: fru-mir-132
hairpin:
-      a    u        au           ug ---a  a 
 gucucc uggu accguggc  uagauuguuac  u    gc a
 |||||| |||| ||||||||  |||||||||||  |    ||  
 cggggg aucG UGGUACCG  AUCUGACAAUg  g    cg c
a      -    C        AC           gu acca  u 


mirna_id: tni-mir-132
hairpin:
-      a    u        au              ---a  a 
 gucucc uggu accguggc  uagauuguuacugu    gc a
 |||||| |||| ||||||||  ||||||||||||||    ||  
 cggggg aucG UGGUACCG  AUCUGACAAUggcg    cg c
a      -    C        AC              acca  u 


mirna_id: fru-mir-125b
hairpin:
cucuca     U    C           -    ug   
      uUCCC GAGA CCUAACUUGUG Acgu  ug 
      ||||| |||| ||||||||||| ||||  | c
      gaggg uucu ggguugggcac ugua  gu 
---guc     -    u           g    gu   


mirna_id: tni-mir-125b
hairpin:
--------- ua      u  -     U    C           -    ug   
         g  ccucuc ca uUCCC GAGA CCUAACUUGUG Acgu  ug 
         |  |||||| || ||||| |||| ||||||||||| ||||  | c
         c  ggggag gu gaggg uucu ggguugggcac ugua  gu 
cuacacacu gc      c  c     -    u           g    gu   


mirna_id: fru-mir-29a-2
hairpin:
gaagacagucuuggacucccuucccc   -c     caaaag            uuc       g    uc   u 
                          guc  uccac      augacugauuuc   uggugcu agag  ggc g
                          |||  |||||      ||||||||||||   ||||||| ||||  |||  
                          uag  gggug      uAUUGGCUAAAG   ACCACGA Ucuu  ccg c
----------------------uaca   cu     acaaaa            UUU       -    --   a 


mirna_id: tni-mir-29a-2
hairpin:
-uguuuc     caaaag            cuc       --u  a  c c 
       uccac      augacugauuuc   uggugcu   ag gc g c
       |||||      ||||||||||||   |||||||   || || |  
       aggug      uAUUGGCUAAAG   ACCACGA   uc cg c u
cgugacu     ucaaaa            UUU       Ucu  -  a g 


mirna_id: fru-mir-29b-1
hairpin:
u   -   -          u      gu       u ucu 
 cca gaa gcugguuuca guggug  uuagaug g   u
 ||| ||| |||||||||| ||||||  ||||||| |    
 ggu cuU UGACUAAAGU UACCAC  GAUcugu c   c
-   u   G          U      --       u ucc 


mirna_id: tni-mir-29b-1
hairpin:
     -   -          c      gu       -  uc 
cucca gaa gcugguuuca guggug  uuagaug ug  u
||||| ||| |||||||||| ||||||  ||||||| ||   
ggggu cuU UGACUAAAGU UACCAC  GAUcugc ac  c
     u   G          U      --       u  uc 


mirna_id: fru-let-7a-1
hairpin:
c   uU   G   U             ---gaga   a 
 agg  GAG UAG AGGUUGUAUAGUU       gug c
 |||  ||| ||| |||||||||||||       |||  
 ucc  uuc auc uccgacaugucag       cac a
-   cu   g   c             uagagga   c 


mirna_id: tni-let-7a-1
hairpin:
c    U   G   U              ---aga   a 
 aggg GAG UAG AGGUUGUAUAGUUg      gug c
 |||| ||| ||| ||||||||||||||      |||  
 uccc uuc auc uccgacaugucaau      cac a
-    u   g   c              agagga   c 


mirna_id: fru-mir-100
hairpin:
    A   CG     C   A      g  ac 
caca ACC  UAGAU CGA CUUGUG ug  u
|||| |||  ||||| ||| |||||| ||   
gugu ugg  aucua gcu gaacac gc  g
    a   au     u   c      -  cg 


mirna_id: fru-mir-219-1
hairpin:
---------U   U     AA           u aaaauuc 
          GAU GUCCA  CGCAAUUCUUg g       a
          ||| |||||  ||||||||||| |        
          cua caggu  guguuaagagc c       a
aggucguugu   -     cc           - cauccua 


mirna_id: tni-mir-219-1
hairpin:
ucu    -a        U   U     AA           u aaaaucc 
   gagc  cuagcagc GAU GUCCA  CGCAAUUCUUg g       a
   ||||  |||||||| ||| |||||  ||||||||||| |        
   cucg  ggucguug cua caggu  guguuaagagc c       a
--c    ca        u   -     cc           - cauccga 


mirna_id: fru-mir-24-1
hairpin:
ggguugugccc      G   A         UA     --g  a 
           uccuGU CCU CUGAACUGG  UCAGU   uc u
           |||||| ||| |||||||||  |||||   || a
           agGACA GGA GACUUGACU  GGUca   gg c
---------ug      A   C         -C     aaa  u 


mirna_id: tni-mir-24-1
hairpin:
-c       g   a         uaug    u  a 
  uuccugu ccu cugagcuga    cagu gu c
  ||||||| ||| |||||||||    |||| || a
  gagGACA GGA GACUUGACU    GUca ca g
cu       A   C         --CG    c  a 


mirna_id: fru-mir-23a-1
hairpin:
g      c    a  --          cc       gaugcaca 
 cugugg gggg gg  guuccuggca  gugauuu        a
 |||||| |||| ||  ||||||||||  |||||||        a
 gacacu uccc CC  UAGGGACCGU  CACUAaa        g
-      u    A  UU          UA       aacaaaca 


mirna_id: fru-mir-27e
hairpin:
------cac ug  aa      c           auug       uugauccc 
         u  cu  aggcac gagcuuagcua    gugagca        u
         |  ||  |||||| |||||||||||    |||||||         
         a  gg  uccGUG CUUGAAUCGGU    CACUUgu        g
aguugauaa gu  ag      A           --GA       uguguauc 


mirna_id: tni-mir-27e
hairpin:
cucuugcugaa     a           auug       uugauccc 
           ggcac gagcuuagcua    gugagca        u
           ||||| |||||||||||    |||||||         
           ccGUG CUUGAAUCGGU    CACUUgu        g
-----------     A           --GA       uguguauc 


mirna_id: fru-mir-375
hairpin:
ugu      uuc    u     uc   c    uac  gaa 
   acuugc   acgu gagcc  acg acaa   cu   g
   ||||||   |||| |||||  ||| ||||   ||    
   uggacg   UGCG CUCGG  UGC UGUU   ga   a
---      uAU    -     CU   U    -Uu  agu 


mirna_id: fru-mir-128-1
hairpin:
---   a c     uac        ga      uu    g  cu 
   gag g cuggg   ggggccgg  cgcugu  gaga uc  c
   ||| | |||||   ||||||||  ||||||  |||| ||   
   cuc c gaccU   CUCUGGCC  GUGACA  CUcu ag  u
uca   c c     UUU        AA      --    a  ua 


mirna_id: tni-mir-128-1
hairpin:
      uac        ga      uu    g  ca 
gcugca   ggggccgg  cgcugu  gaga uc  c
||||||   ||||||||  ||||||  |||| ||   
cgacgU   CUCUGGCC  GUGACA  CUcu ag  u
      UUU        AA      --    a  ua 


mirna_id: fru-mir-1
hairpin:
  u  u                  ac     u gacau 
cu ag guacauacuucuuuaugu  ccaua g     a
|| || ||||||||||||||||||  ||||| |      
gg uc UAUGUAUGAAGAAAUGUA  GGUau c     u
  u  u                  -A     - aauag 


mirna_id: tni-mir-1
hairpin:
a       -  u  u                  a  --------     g 
 uuaccuc cu ag guacauacuucuuuaugu cc        cauau a
 ||||||| || || |||||||||||||||||| ||        |||||  
 aguggag gg uc UAUGUAUGAAGAAAUGUA GG        guaua a
-       u  u  u                  A  Uaucaaua     c 


mirna_id: fru-mir-202
hairpin:
-   u           -a   a       c   ug 
 ucc uuuuccuaugc  uau ccuuuuu aga  u
 ||| |||||||||||  ||| ||||||| |||   
 ggg AAAAGGGUACG  AUA GGAGAaa uuu  a
g   u           GG   C       -   ca 


mirna_id: fru-mir-203
hairpin:
--   a            c    g    -acag   u 
  cug uuaagugguucu aaca uuca     uuc a
  ||| |||||||||||| |||| ||||     ||| u
  gac aGUUCACCAGGA UUGU AAGU     aag g
cu   c            U    A    Guuaa   a 


mirna_id: tni-mir-203
hairpin:
--   a            c    g    -acag   u 
  cug uuaagugguucu aaca uuca     uuc u
  ||| |||||||||||| |||| ||||     ||| u
  gac aGUUCACCAGGA UUGU AAGU     aag g
cu   c            U    A    Guuaa   a 


mirna_id: fru-mir-23a-3
hairpin:
ucuguu     -g  gg           a       uuaga u 
      ggcca  gg  auuccuggcag gugauuu     c a
      |||||  ||  ||||||||||| |||||||     |  
      ucggu  CC  UAGGGACCGUU CACUAag     g c
------     aA  UU           A       -ucag a 


mirna_id: tni-mir-23a-3
hairpin:
ucuguu     -g               a       ----   ag 
      ggcca  gggaauuccuggcag gugauuu    uug  a
      |||||  ||||||||||||||| |||||||    |||   
      ucggu  CCUUUAGGGACCGUU CACUAag    gac  c
------     aA               A       ucag   au 


mirna_id: fru-mir-27c
hairpin:
ggcugugu                 c  a        g  a  g 
        ggcggcaggacuuaacc ac ugugagca ug gu u
        ||||||||||||||||| || |||||||| || ||  
        ccgcCGUCUUGAAUUGG UG ACACUUgu ac cg g
--------                 -  -        -  -  u 


mirna_id: tni-mir-27c
hairpin:
ggcugugc                 c  a        g  a u 
        ggcggcaggacuuaacc ac ugugaaca ug g g
        ||||||||||||||||| || |||||||| || |  
        ccgcCGUCUUGAAUUGG UG ACACUUgu gc c u
--------                 -  -        -  - g 


mirna_id: fru-mir-24-2
hairpin:
g gu           g       u     uaa     gugu 
 g  cagucuccugu ccugcug gcuga   ucagu    g
 |  ||||||||||| ||||||| |||||   |||||    a
 c  gucagggGACA GGACGAC UGACU   GGUcg    c
- ug           A       U     --C     guug 


mirna_id: tni-mir-24-2
hairpin:
gggu           g       u     uaa     gugu 
    cagucuccugu ccugcug gcuga   ucagu    g
    ||||||||||| ||||||| |||||   |||||    a
    gucagggGACA GGACGAC UGACU   GGUcg    c
---g           A       U     --C     guug 


mirna_id: fru-mir-138
hairpin:
---  ug AG             UCA     augacagaca 
   gc  c  CUGGUGUUGUGAA   GGCCg          c
   ||  |  |||||||||||||   |||||           
   cg  g  gaccacaacacuu   ucggc          c
cca  gu -g             -ua     cgaauauccu 


mirna_id: tni-mir-138
hairpin:
---  ug AG             UCA     augacagaca 
   gc  c  CUGGUGUUGUGAA   GGCCg          c
   ||  |  |||||||||||||   |||||           
   cg  g  gaccacaacacuu   ucggc          c
cca  gu -g             -ua     cgaagauccu 


mirna_id: fru-mir-129-2
hairpin:
u    -       C   CU      G   uuc   ag 
 gggu CUUUUUG GGU  GGGCUU CUg   cua  g
 |||| ||||||| |||  |||||| |||   |||   
 ucua gaaaaac cca  cccgaa gac   gau  c
g    u       c   uu      g   --c   ga 


mirna_id: tni-mir-129-2
hairpin:
    -       C   CU      G   uuc   ag 
gggu CUUUUUG GGU  GGGCUU CUg   cua  g
|||| ||||||| |||  |||||| |||   |||   
ucua gaaaaac cca  cccgaa gac   gau  c
    u       c   uu      g   --c   ga 


mirna_id: fru-mir-125a
hairpin:
cuucagug    U   AC     A        gaua 
        UCCC GAG  CCUUA CCUGUGau    u
        |||| |||  ||||| ||||||||     
        aggg uuc  ggagu ggacacug    g
------ca    -   cu     -        gaaa 


mirna_id: tni-mir-125a
hairpin:
cagug    U   AC     A        aacg 
     UCCC GAG  CCUUA CCUGUGau    u
     |||| |||  ||||| ||||||||     
     aggg uuc  ggagu ggacacug    g
---ca    -   cu     -        gaaa 


mirna_id: fru-mir-17-2
hairpin:
g   a        -C         A  G     G   uu  a 
 uca aguagugu  AAAGUGCUU CA UGCAG UAg  ug u
 ||| ||||||||  ||||||||| || ||||| |||  ||  
 agu uuaucgcg  uuucacgga gu acguc auc  ac g
-   c        ac         a  g     -   -u  a 


mirna_id: tni-mir-17-2
hairpin:
g   cc       -C         A  G     G   uuaa 
 uca  guagugu  AAAGUGCUU CA UGCAG UAg    a
 |||  |||||||  ||||||||| || ||||| |||    a
 agu  uaucacg  uuucacgga gu acguc auc    g
-   cu       ac         a  g     -   uaaa 


mirna_id: fru-mir-20
hairpin:
-------  c       -           G     G   uua u 
       ag aguauUA AAGUGCUUAUA UGCAG UAG   c g
       || ||||||| ||||||||||| ||||| |||   |  
       uc ucaugau uucacgagugu acguc auc   g a
acguaga  u       c           g     -   -ug u 


mirna_id: tni-mir-20
hairpin:
- c       -           G     G   uuu  u 
 g aguauUA AAGUGCUUAUA UGCAG UAG   uc c
 | ||||||| ||||||||||| ||||| |||   ||  
 c ucaugau uucacgaguau acguc auc   gg a
u u       c           g     -   --u  g 


mirna_id: fru-mir-92-1
hairpin:
       g            g    a        -  ga 
cuuuccu ugcagguuggga aggu gcaaugcu ca  g
||||||| |||||||||||| |||| |||||||| ||  a
ggaagga gUGUCCGGCCCU UUCA CGUUAUgg gu  u
       g            G    -        c  au 


mirna_id: tni-mir-92-1
hairpin:
cuuuc  g            g    a       u  g g 
     cu uacagguuggga aggu gcaaugc cg a u
     || |||||||||||| |||| ||||||| || | u
     ga gUGUCCGGCCCU UUCA CGUUAUg gu u c
-----  g            G    -       -  g a 


mirna_id: fru-mir-15b
hairpin:
ugaguc       cug   U       C  C          -a gaug 
      ccuuaga   cua AGCAGCG AU AUGGUUUGUA  c    u
      |||||||   ||| ||||||| || ||||||||||  |    a
      ggaauuu   gau ucgucgu ua uaccgaacgu  g    g
---aaa       uaa   u       c  a          gg aaaa 


mirna_id: tni-mir-15b
hairpin:
gc       cug  uU       C  C          augaug g 
  ccuuaga   cu  AGCAGCG AU AUGGUUUGUA      u g
  |||||||   ||  ||||||| || ||||||||||      |  
  ggaauuu   ga  ucgucgu ua uaccaaacgu      a a
aa       uaa  uu       u  a          -ggaaa a 


mirna_id: fru-mir-10c
hairpin:
----------cu    u      -  A    G    UC          uaaaaauc 
            gucu cuauau cU CCCU UAGA  CGGAUUUGUg        a
            |||| |||||| || |||| ||||  ||||||||||        u
            uagg gauaua ga gggg aucu  gcuuaaacac        u
gcagcacauauu    u      u  -    -    uc          uaacgaaa 


mirna_id: tni-mir-10c
hairpin:
----gagccgcu    u      -  A    G    UC          uaacgauc 
            gucu cuauau cU CCCU UAGA  CGGAUUUGUg        a
            |||| |||||| || |||| ||||  ||||||||||        u
            uagg gauaua ga gggg aucu  gcuuaaacac        u
gcagcacauauu    u      u  -    -    uc          uaacgaaa 


mirna_id: fru-mir-9-3
hairpin:
ggagcugu       UC               G     ---      
        guuucug  UUUGGUUAUCUAGCU UAUGA   guguu 
        |||||||  ||||||||||||||| |||||   |||| a
        uaaagau  aagccaauagaucga auacu   cauaa 
--------       ga               a     guc      


mirna_id: fru-mir-183
hairpin:
    g      --AC     GA       ----    g 
cugu UAUGGC    UGGUA  AUUCACU    Guga a
|||| ||||||    |||||  |||||||    ||||  
gaca auaccg    accau  uaaguga    cacu g
    a      ggau     --       cuau    c 


mirna_id: fru-mir-96
hairpin:
---------c   -     g  c  U         G     UU      -cu   u 
          ucu ucuuc cc au UUGGCACUA CACAU  UUGCUu   gua g
          ||| ||||| || || ||||||||| |||||  ||||||   |||  
          aga agaag gg ua aaccgugau gugua  aacgag   cau u
uccaacuuuc   c     a  a  u         -     uu      uuu   a 


mirna_id: tni-mir-96
hairpin:
uug  c  U         G     UU      -cu   u 
   cc au UUGGCACUA CACAU  UUGCUu   gua a
   || || ||||||||| |||||  ||||||   |||  
   gg ua aaccgugau gugua  aacgag   cau u
aga  a  u         -     uu      uuu   a 


mirna_id: fru-mir-182
hairpin:
-----ugu       u -g      uca      ugaggu 
        uuggcaa g  uagaac   cacugg      a
        ||||||| |  ||||||   ||||||       
        AACCGUU C  AUCUUG   GUggcc      g
ucgucAUC       - AG      ---      uaggua 


mirna_id: tni-mir-182
hairpin:
ugu       u -g      uca      ugaggu 
   uuggcaa g  uagaac   cacugg      a
   ||||||| |  ||||||   ||||||       
   AACCGUU C  AUCUUG   GUggcc      g
AUC       - AG      ---      uaggua 


mirna_id: fru-mir-210
hairpin:
----------       g     g    a   acua       u  -c  cag 
          ucuaaaa caggu agcc cug    acgcaca ug  gc   u
          ||||||| ||||| |||| |||    ||||||| ||  ||   u
          ggguuuu guccA UCGG GAC    UGCGUGU ac  ug   g
gucuucgcaa       g     A    C   AGUG       C  cu  aca 


mirna_id: tni-mir-210
hairpin:
----------     g    a   acua       u  -u  cag 
          caggu agcc cug    acgcaca ug  gc   u
          ||||| |||| |||    ||||||| ||  ||   u
          guccA UCGG GAC    UGCGUGU ac  ug   g
agggguuuug     A    C   AGUG       C  cu  aca 


mirna_id: fru-let-7g
hairpin:
u    U   GU     U          ----uua     ac 
 ggga GAG  AGUAG UUGUAUAGUU       ggauc  a
 |||| |||  ||||| ||||||||||       |||||   
 cccu uuc  ucauc gacauaucaa       ucuag  c
a    -   ug     u          uagaggg     ac 


mirna_id: fru-mir-22a
hairpin:
       u              -      a      --   ccu 
gccgacc acagcaguucuuca cuggca gcuuua  ugu   c
||||||| |||||||||||||| |||||| ||||||  |||   g
cgguugg uguUGUCAAGAAGU GACCGU CGAAau  aca   u
       -              C      -      cg   acg 


mirna_id: tni-mir-22a
hairpin:
       u              -      a      -----   cc 
gccgacc acagcaguucuuca cuggca gcuuua     ugu  u
||||||| |||||||||||||| |||||| ||||||     |||   
cggcugg uguUGUCAAGAAGU GACCGU CGAAau     acg  c
       -              C      -      cgcca   ug 


mirna_id: fru-mir-204a
hairpin:
---------u     cug     U         CA    A     ggagc 
          gugac   ugggc UCCCUUUGU  UCCU UGCCU     u
          |||||   ||||| |||||||||  |||| |||||      
          cacug   acucg agggaaacg  aggg acgga     c
cuacagucac     ucg     u         ac    -     auagg 


mirna_id: tni-mir-204a
hairpin:
----------u     cug     U         CA    A     ggagc 
           gugac   ugggc UCCCUUUGU  UCCU UGCCU     u
           |||||   ||||| |||||||||  |||| |||||      
           cacug   acucg agggaaacg  aggg acgga     c
acuucagucac     ccg     u         ac    -     auagg 


mirna_id: fru-mir-152
hairpin:
----   u         gauacacu      -  gaau 
    ggc aaguucugu        cugacu gu    g
    ||| |||||||||        |||||| ||     
    cUG UUCAAGACA        GACUga cg    u
ggcc   U         --AUACGU      u  uauc 


mirna_id: tni-mir-152
hairpin:
cugcucaaacu     - u         gauacacu      -  gaau 
           cuggg c aaguucugu        cugacu gu    g
           ||||| | |||||||||        |||||| ||     
           ggccc G UUCAAGACA        GACUga cg    g
-----------     U U         --AUACGU      u  uauc 


mirna_id: fru-mir-15a
hairpin:
cuggugaugcu UA         A          gg  a 
           g  GCAGCACGG AUGGUUUGUG  uu c
           |  ||||||||| ||||||||||  || a
           c  cgucguguc uaccggacau  ag c
----------a gc         a          ag  u 


mirna_id: tni-mir-15a
hairpin:
cuggugaugcu UA         A          ag  a 
           g  GCAGCACGG AUGGUUUGUG  uu c
           |  ||||||||| ||||||||||  || a
           c  cgucguguc uaccgaacau  ag c
----------a gc         g          ag  u 


mirna_id: fru-mir-16
hairpin:
gc  -  g    g          -UA          u  ag  u 
  ca cu ugcu UAGCAGCACG   AAUAUUGGAG ua  gc c
  || || |||| ||||||||||   |||||||||| ||  || u
  gu ga acga gucgucgugc   uuaugaccuc au  ug c
ca  a  a    a          uag          c  ag  u 


mirna_id: tni-mir-16
hairpin:
--------          -UA          u  ag  u 
        UAGCAGCACG   AAUAUUGGAG ua  gc c
        ||||||||||   |||||||||| ||  || u
        gucgucgugc   uuaugaccuc au  ug c
gaaacgaa          uag          c  ag  u 


mirna_id: fru-mir-190
hairpin:
    -cU                UA     uuau 
cugu   GAUAUGUUUGAUAUAU  GGUug    u
||||   ||||||||||||||||  |||||     
gaca   uuauacaaacuauaua  ucaac    c
    ucc                --     cuga 


mirna_id: fru-mir-181a-2
hairpin:
gacuuug      cu ug   A          CU       A     guc 
       ucaagu  u  ggg ACAUUCAACG  GUCGGUG GUuuu   u
       ||||||  |  ||| ||||||||||  ||||||| |||||    
       aguuca  a  ccc ugugaguugu  cagcuac caaaa   c
-cccucg      -c gu   a          --       -     agc 


mirna_id: mmu-mir-489
hairpin:
----ac  c g  -       c                  A  A  CU    aaag 
      ug u ca guggcag uugguUGUCAUAUGUGUG UG CA  UUCU    u
      || | || ||||||| |||||||||||||||||| || ||  ||||     
      ac a gu cauuguc aauCGACGGUAUAUACAC AC GU  AAga    c
ugaaca  a g  a       a                  C  A  --    ccuu 


mirna_id: rno-mir-489
hairpin:
----acugcuaca       c              C      ACA      c ug 
             guggcag uugguUGUCGUAUG GUGAUG   CGUUCu g  u
             ||||||| |||||||||||||| ||||||   |||||| |   
             cauuguc aauCGACGGUAUAU CACUAC   GUAaga c  a
ugaacaacaagga       a              A      --A      c uu 


mirna_id: rno-mir-383
hairpin:
----uccuCA      AA    A        uug   gga 
          GAUCAG  GGUG CUGUGGcu   ggu   u
          ||||||  |||| ||||||||   |||    
          CUGGUC  UCAC GACACCga   cua   a
acgagaaAGA      CG    -        ---   auu 


mirna_id: rno-mir-207
hairpin:
-   c     u ag    ug           -    g ag 
 agg agggg g  gggc  cgggaggagcg gggc g  g
 ||| ||||| |  ||||  ||||||||||| |||| |   
 uuc UUCCC C  CUCG  GUCCUCUUCgc uucg c  c
u   U     U CU    --           g    g gu 


mirna_id: rno-mir-501
hairpin:
   cg  c       UC     U   U     Aaaa   uau 
gcu  uc ucucuAA  CUUUG CCC GGGUG    ugc   u
|||  || |||||||  ||||| ||| |||||    |||   u
cga  gg aggGGUU  GGAAC GGG CCCAC    Acg   g
   au  a       UA     -   -     -GUA   uau 


mirna_id: rno-mir-361
hairpin:
     UU         --U  A    U    a  a 
gaagc  AUCAGAAUC   CC GGGG ACuu uu u
|||||  |||||||||   || |||| |||| ||  
cuuUG  UAGUCUUAG   GG CCCC ugaa ag u
     CU         UGU  A    C    a  u 


mirna_id: rno-mir-215
hairpin:
--------------  ug       c A  A     -  UU        A ug  g 
              gg  uacagga a UG CCUAU GA  UGACAGAC g  ug c
              ||  ||||||| | || ||||| ||  |||||||| |  ||  
              cu  augucuu u ac ggaug cu  acugucug u  gc u
aacauuccuccucu  gu       a a  c     u  -u        - gu  g 


mirna_id: rno-mir-224
hairpin:
       CA         U   U      a u   ug  uu 
gggcuuu  AGUCACUAG GGU CCGUUU g aga  gu  u
|||||||  ||||||||| ||| |||||| | |||  ||   
cccgaaA  UCAGUGAUC CCG GGUAAA c uuu  ua  u
       CA         -   U      a -   gu  cg 


mirna_id: mmu-mir-483
hairpin:
       -          AA   AA   A u   uuu 
gaggggg AAGACGGGAG  GAG  GGG G ggu   u
||||||| ||||||||||  |||  ||| | |||    
cucucuu UUCUGCCCUC  CUC  CUC C ccg   g
       g          CC   --   A U   ugg 


mirna_id: rno-mir-483
hairpin:
       -          AA   AA   A u   uuu 
gaggggg AAGACGGGAG  GAG  GGG G ggu   u
||||||| ||||||||||  |||  ||| | |||    
cucucuU UUCUGCCCUC  CUC  CUC C ccg   g
       G          CC   --   A u   ugg 


mirna_id: rno-mir-370
hairpin:
       g         CA GU   U    U   A  g 
agacaga agacCAGGU  C  CUC GCAG UAC Ca c
||||||| |||||||||  |  ||| |||| ||| || u
ucugucu uuUGGUCCA  G  GGG CGUC Gug gu c
       g         AG UG   U    C   a  a 


mirna_id: rno-mir-377
hairpin:
  ug g           C   -    A    - uuu 
cu  a cAGAGGUUGCC UUG GUGA UUCg c   a
||  | ||||||||||| ||| |||| |||| |   u
ga  u gUUUUCAACGG AAC CACU AAGU g   u
  gu g           A   A    -    u uag 


mirna_id: rno-mir-412
hairpin:
-gg     a    C      C   AA    -    u 
   gacgg UGGU GACCAG UGG  AGUa auug u
   ||||| |||| |||||| |||  |||| ||||  
   cUGCC AUCA CUGGUC ACU  UCau uaau u
ugg     G    C      C   --    g    c 


mirna_id: rno-mir-1
hairpin:
             C                AC     ugaaca 
ugccuacucagaG ACAUACUUCUUUAUGU  CCaua      u
||||||||||||| ||||||||||||||||  |||||       
auggauggguuuU UGUGUGAAGAAAUGUA  GGUau      a
             A                -A     cguaag 


mirna_id: rno-mir-133b
hairpin:
-------       c        CA  C  A      U  g      
       cccugcu ugGCUGGU  AA GG ACCAAG cc ucuuc 
       ||||||| ||||||||  || || |||||| || |||| c
       gggacga AUCGACCA  UU CC UGGUUU gg agagu 
aacgguc       c        AC  C  C      -  -      


mirna_id: mmu-mir-484
hairpin:
cu    AG  U        UCCCGAUaaaccuca 
  cgUC  GC CAGUCCCC               a
  ||||  || ||||||||                
  gcgg  cg gucggggg               a
au    --  -        auccauucugggaua 


mirna_id: mmu-mir-485
hairpin:
   u         CU       -    A    auuc 
acu ggagAGAGG  GGCCGUG AUGA UUCg    a
||| |||||||||  ||||||| |||| ||||    u
uga cuuCUCUCC  UCGGCAC UACU GAgc    c
   u         UC       A    -    aaau 


mirna_id: mmu-mir-486
hairpin:
ca  --cag     auc  g   u      g g                       guccuuca   u 
  gc     cucug   uc ccc cccuga g gUCCUGUACUGAGCUGCCCCGAG        cug g
  ||     |||||   || ||| |||||| | |||||||||||||||||||||||        |||  
  cg     ggggc   ag ggg gggacu c UAGGACAUGACUCGACGGGGCuc        gac c
ac  aacaa     aac  a   u      g g                       --------   u 


mirna_id: ppt-MIR390a
hairpin:
--     u   a  a            G            -         uucu   u g   -c    u 
  cauga aca uu cgAAGCUCAGGA GGAUAGCGCCau ucucuguuc    cua c aca  uugg a
  ||||| ||| || |||||||||||| |||||||||||| |||||||||    ||| | |||  ||||  
  gugcu ugu aa guuucgagucuu ccuauugcggua agagacggg    gau g ugu  gacc a
uc     c   g  c            a            u         uauc   c -   uc    a 


mirna_id: ppt-MIR390b
hairpin:
-------------------aucaagcugcu   a      a  a            G        CC  -  -c    -         u  auc   ua 
                              ggg gauaca uu cgAAGCUCAGGA GGAUAGCG  ca gc  cugc uuuuacugu ca   agu  g
                              ||| |||||| || |||||||||||| ||||||||  || ||  |||| ||||||||| ||   |||   
                              ccc cugugu aa guuucgagucuu ccuaucgc  gu cg  gacg agaaugaua gu   ucg  a
uggucgauuggcuaggccaacggguuuaau   c      c  c            a        -a  a  ua    u         -  -cu   ug 


mirna_id: ppt-MIR319a
hairpin:
          g           u  ug    c a        g u  c c g   aau  c    c     u   -           
guggagcucc uuucgguccaa ag  gcug g cggaaggu g cc g u ccg   ca acgu cgggu gcu uaucggggca 
|||||||||| ||||||||||| ||  |||| | |||||||| | || | | |||   || |||| ||||| ||| ||||||||| g
caCCUCGAGG GAAGUCAGGUU uc  cggc c gccuucca c gg c a ggc   gu ugca gccua ugg auagccccgg 
          -           C  ug    - c        g u  u a g   ccu  u    a     -   c           


mirna_id: ppt-MIR319b
hairpin:
--                  u  ca      g c  a     uacc   g   ac   a    c   c              
  gagcucuuuucaguccag ag  gcuaau u ga gguug    gcu ccg  uca acuu cgg uuccauaucacga 
  |||||||||||||||||| ||  |||||| | || |||||    ||| |||  ||| |||| ||| |||||||||||| c
  CUCGAGGGAAGUCAGGUU uc  cgauug a cu cuagc    cga ggc  agu ugga gcc aagguauagugcg 
uC                  C  ua      g c  -     uagu   g   cu   c    a   u              


mirna_id: ppt-MIR319c
hairpin:
     u  cu   u                      u  u      ua     -    a u   g   ac   a  uuc   c      c  uu 
uaacc ca  ggc gugggagcuuccuucgguucaa ag ggcuga  ugagg uugc c gcu ccg  uca ac   cgg uucccu uc  a
||||| ||  ||| |||||||||||||||||||||| || ||||||  ||||| |||| | ||| |||  ||| ||   ||| |||||| ||  g
auugg gu  cug uaCCCUCGAGGGAAGUCAGGUU uc ucgacu  acuuc ggcg g cga ggc  agu ug   gcc aaggga gg  a
     u  uu   -                      C  u      ca     u    a u   g   gu   c  uaa   u      c  ua 


mirna_id: ppt-MIR319d
hairpin:
     u      UU           U  UG         A      U  u   g   ac   a  uuc   c    c  u   a 
cagcg gGAGCU  CUUCGGUCCAA Ag  GCUGAGUCG AGGUUG GC gcu ccg  uca ac   cgg uucc ua cca c
||||| ||||||  ||||||||||| ||  ||||||||| |||||| || ||| |||  ||| ||   ||| |||| || ||| c
gucgc CCUCGA  GAAGUCAGGUU uc  cgauucggc ucuaac ug cga ggc  agu ug   gcc aagg au ggu c
     C      GG           C  ua         c      u  u   g   au   c  uaa   u    u  -   c 


mirna_id: ppt-MIR533a
hairpin:
           GC             ac     aga     cuu u    cc 
augggGAGCUG  CAGGCUGUGAGGG  ggagc   guugg   g ggcu  u
|||||||||||  |||||||||||||  |||||   |||||   | ||||   
ugcCUCUCGAC  GUCUGACACUCcu  cuucg   cgacc   c ccgg  u
           AC             -c     --a     ucc -    ug 


mirna_id: ppt-MIR534a
hairpin:
     c        ugu       g     --      u  ug    -a    aaaguauuaguugguugaugcacgauguuguuuugcaacaagugacu 
auaug augcaacu   guggaca acuga  cuaguc ag  gugu  gugg                                               c
||||| ||||||||   ||||||| |||||  |||||| ||  ||||  ||||                                               g
uauaC UACGUUGA   UACCUGU Ugacu  gaucag uc  uaca  cacc                                               u
     A        CGU       A     ua      c  gu    cc    gggguuaguuuuguugaagguuuugaacacccaagucauaacgucgc 


mirna_id: ppt-MIR535a
hairpin:
     u   acg        ---ccua          AG    A              uu    u  a 
ggagg gaa   guggagaa       ggUGACAACG  AGAG GCACGCuggaaugc  uuca gc a
||||| |||   ||||||||       ||||||||||  |||| ||||||||||||||  |||| || u
ucucc cuu   uaccucuu       ccgcuguugc  ucuc cgugcgaucuugug  aggu cg a
     u   cag        cuacaaa          ca    c              -u    u  c 


mirna_id: ppt-MIR535b
hairpin:
      A  A     A      u     gc    u   a 
gUGACA CG GAGAG GCACGC ggaau  acuc ugu a
|||||| || ||||| |||||| |||||  |||| ||| g
cgcugu gc cucuc cgugug ucuug  uggg acg a
      c  c     c      u     ua    u   a 


mirna_id: ppt-MIR535c
hairpin:
         A     A      u       u    c  a 
gUGACAACG GAGAG GCACGC ggaaugc uuca gc a
||||||||| ||||| |||||| ||||||| |||| || u
cgcuguugc cuuuc cgugcg ucuugug aggu cg a
         c     c      u       u    c  a 


mirna_id: osa-MIR535
hairpin:
             A            c      -----    u a   u 
ggcggUGACAACG GAGAGAGCACGC ggugcg     gcgg c cgg g
||||||||||||| |||||||||||| ||||||     |||| | |||  
ccgUCACUGUUGC CUCUUUCGUGcg ccaugc     cgcc g gcc a
             C            u      ggcgg    c -   g 


mirna_id: ppt-MIR156a
hairpin:
    gu      u u  ga       -               gc  a   u    aug 
ggcg  ggagga g gg  gUGACAG AAGAGAGUGAGCACa  ug gca guac   a
||||  |||||| | ||  ||||||| |||||||||||||||  || ||| ||||    
ucgc  uuuccu c cc  cgcuguc uucucucacucgugu  ac cgu caug   g
    ag      - u  -a       c               gu  c   u    aag 


mirna_id: ppt-MIR536a
hairpin:
   uu      cuu  a   -   u         -        ua     aauuucau      uuuc    uuagucgau      -     ------  c     -u     
uga  ccaccc   gg ugu cac gcuuggcac aauccucu  uugug        guccuc    gugg         agaguu guacu      ac uuuau  cauc 
|||  ||||||   || ||| ||| ||||||||| ||||||||  |||||        ||||||    ||||         |||||| |||||      || |||||  ||| c
auu  gguggg   cC ACG GUG CGAACCGUG UUggggga  aacac        uagggg    cacu         ucucga cguga      ug aaaua  guga 
   uu      aau  A   U   U         C        -c     ------gu      --uu    ---------      u     ccuguu  u     uu     


mirna_id: ppt-MIR537a
hairpin:
       -      a   a              g   c ag     a  -au     u   gccauggaaacagauaagagcucaugucuggguu 
guugucg ucauau ugg cuguagaaacaccu aag g  ugagg cc   ccgau cua                                  c
||||||| |||||| ||| |||||||||||||| ||| |  ||||| ||   ||||| |||                                  c
cgauagu aguaua AUC GACAUCUUUGUGGA UUc c  acuuc gg   ggcua gau                                  u
       u      c   G              G   u aa     -  auu     c   agaguacgcguuuggaguuuucguagugucuuug 


mirna_id: ppt-MIR537b
hairpin:
      c   a              g   u ac       a  -       ----aggua  a     a      c 
ucauau ugg cuguagaaacaccu aag g  ugaaguu gu ccgguuu         ug gaaug uuggag a
|||||| ||| |||||||||||||| ||| |  ||||||| || |||||||         || ||||| |||||| c
aguaua AUC GACAUCUUUGUGGA UUc c  acuucga cg ggccaaa         ac cuugu gaccuc c
      c   G              G   u ga       a  u       guaauguag  -     a      u 


mirna_id: ppt-MIR538a
hairpin:
u     ug    ug  a  c      cu          U        U              uu     -------u     ccg    aa   u 
 uacaa  aguu  ug gu uccaug  gcucuaacaU GCAUGGAG CUAUGUCUGGAgua  guccu        cauuc   ugca  ugc g
 |||||  ||||  || || ||||||  |||||||||| |||||||| ||||||||||||||  |||||        |||||   ||||  |||  
 auguu  ucaa  gc ca aggugu  ugagauugua cguacuuc gaugcagaccuuau  caggg        guaag   acgu  aug a
a     ca    gu  c  a      ag          -        c              --     uuacaagu     --a    -a   a 


mirna_id: ppt-MIR538b
hairpin:
    g  u     a   U        U           c   ------   -   uug    u 
ccau cu cucua cgU GCAUGGAG CUAUGUCUGGA cuc      cuc cau   cucu u
|||| || ||||| ||| |||||||| ||||||||||| |||      ||| |||   ||||  
ggua ga gagau gua cguacuuc gauacaggcuu gag      gag gua   gaga c
    a  u     c   -        c           a   cuuuaa   u   --a    a 


mirna_id: ppt-MIR538c
hairpin:
u     ag     u  a         cuu     a   U        U           -     ---u -   uuc    u 
 uacaa  aguuc ug gucuccaug   cucug cgU GCAUGGAG CUAUGUCUGGA ccuuc    c cau   cucu u
 |||||  ||||| || |||||||||   ||||| ||| |||||||| ||||||||||| |||||    | |||   ||||  
 auguu  ucaag gc cggagguac   gagau gua cguacuuc gauacaggcuu ggaag    g gug   gaga c
a     ca     u  c         uau     c   -        c           a     uuac a   uaa    a 


mirna_id: hsa-mir-455
hairpin:
----ucccu   -g     -----          U      A   C   gaa 
         ggc  ugagg     gUAUGUGCCU UGGACU CAU Gug   g
         |||  |||||     |||||||||| |||||| ||| |||    
         ccg  acucc     CAUAUACGGG ACCUGA Gua cac   c
cuacuguau   ga     guuCA          U      C   c   gac 


mirna_id: hsa-mir-539
hairpin:
     ug          A      G    -    - uuu 
auacu  aGGAGAAAUU UCCUUG UGUG Uucg c   a
|||||  |||||||||| |||||| |||| |||| |   u
uauga  uUUUCUUUAA AGGAAC AUAC Aagu g   u
     gu          C      -    U    a uau 


mirna_id: hsa-mir-544a
hairpin:
auuuu      cua    u           -     u   -ga  c 
     caucac   ggga cuuguuaaaaa gcaga ucu   uu a
     ||||||   |||| ||||||||||| ||||| |||   ||  
     guagug   cuCU GAACGAUUUUU CGUCU Aga   ag g
uaauc      -aa    U           A     U   acc  g 


mirna_id: hsa-mir-545
hairpin:
cccag    ------g   a         - U            A  A     auaaa 
     ccug       cac uuaguaggc c CAGUAAAUGUUU UU GAUGA     u
     ||||       ||| ||||||||| | |||||||||||| || |||||     g
     ggac       gug aaucgucCG G GUUAUUUACAAA GA CUacu     a
-----    accucga   a         U U            C  -     cagua 


mirna_id: mmu-mir-546
hairpin:
------------ccucucuucccaaaa     -  -   u   u   ---       C    U    u 
                           cuaaa ca gga cua cAU   GGUGGCA GGAG Cagc a
                           ||||| || ||| ||| |||   ||||||| |||| |||| g
                           gauuu gu ccu gau gug   cuaucgu ucuc guug a
ggagaggaggggucauagugaaacgaa     u  a   u   c   ucc       -    u    u 


mirna_id: mmu-mir-540
hairpin:
      A      AC        U    -g     
ugggcC AGGGUC  CCUCUGAC CUGU  gcca 
|||||| ||||||  |||||||| ||||  ||| a
auccgG UCCUAG  GGAGACUG GAca  uggg 
      G      CU        -    ga     


mirna_id: mmu-mir-543
hairpin:
u   u  u       U  -     --      -    uu 
 gcu aa gagAAGU GC CCGCG  UGUUUU UCGc  u
 ||| || ||||||| || |||||  |||||| ||||  a
 cga uu UUCUUCA CG GGCGC  ACAAAg agug  u
a   c  u       -  U     UU      c    ua 


mirna_id: mmu-mir-539
hairpin:
    ug                 G    -  g cu u 
uacu  aGGAGAAAUUAUCCUUG UGUG Uu g  c u
||||  ||||||||||||||||| |||| || |  |  
auga  UUUUCUUUAAUAGGAAC AUAC aa u  g u
    gU                 -    u  g ag u 


mirna_id: mmu-mir-541
hairpin:
    a  u     AAG        A    G     ----------      
gcca aa cagag   GGAUUCUG UGUU GUCAC          ACUcc 
|||| || |||||   |||||||| |||| |||||          |||| a
cggu uu gucUC   CCUAAGAC ACAA CGGUg          ugaga 
    a  c     AUA        -    G     aguaaaauuu      


mirna_id: mmu-mir-542
hairpin:
  a        g C    GG    UCA         -a   c 
gg ucucagac u UCGG  AUCA   UGUCACGAg  uac a
|| |||||||| | ||||  ||||   |||||||||  |||  
cc agggucug A AGUC  UAGU   ACAGUGUuc  gug c
  g        g A    AA    UAG         cc   u 


mirna_id: mmu-mir-547
hairpin:
     a   a     UG           CC   uuaaca g 
gugug ugu uCACU  AGGAUGUACCA  CAu      g a
||||| ||| |||||  |||||||||||  |||      |  
cacac aua AGUGA  UUCUACAUGGU  gua      c a
     a   G     GU           UC   ------ a 


mirna_id: rno-mir-540
hairpin:
   ug   c      A      AC        U    -g     
ccc  ggg ugggcC AGGGUC  CCUCUGAC CUGU  gcca 
|||  ||| |||||| ||||||  |||||||| ||||  ||| a
ggg  cuc aucCGG UCCUAG  GGAGACUG GAca  uggg 
   gu   -      G      CU        -    ga     


mirna_id: rno-mir-543
hairpin:
      u  u       U  -     --      -    uu 
ggugcu aa gagAAGU GC CCGCG  UGUUUU UCGc  u
|||||| || ||||||| || |||||  |||||| ||||  a
cuacga uu uUCUUCA CG GGCGC  ACAAAg agug  u
      c  u       -  U     UU      c    ua 


mirna_id: rno-mir-539
hairpin:
                        G    -    cu u 
auacuugaGGAGAAAUUAUCCUUG UGUG Uuug  c u
|||||||||||||||||||||||| |||| ||||  |  
uaugagCUUUUCUUUAAUGGGAAC AUAC aagu  g u
                        -    u    ag u 


mirna_id: rno-mir-541
hairpin:
    a  u     AAG        A    G     A Uccaaga 
gcca aa cagag   GGAUUCUG UGUU GUCAC C       a
|||| || |||||   |||||||| |||| ||||| |       u
cggu uu gucuC   CCUAAGAC ACAA CGGUG g       u
    a  c     AUA        -    G     A uaaaauu 


mirna_id: rno-mir-542
hairpin:
        g C    GG    UCA         auacc 
ucucagac u UCGG  AUCA   UGUCACGAg     a
|||||||| | ||||  ||||   |||||||||     c
agggucug A AGUC  UAGU   ACAGUGUuc     u
        g A    AA    UAG         acgcg 


mirna_id: hsa-mir-376a-2
hairpin:
      u    G  A         U         --   g 
gguauu aaaa GU GAUUUUCCU CUAUGGUua  cgu u
|||||| |||| || ||||||||| |||||||||  ||| u
cuauga uuuU CA CUAAAAGGA GAUACUAau  gua u
      c    G  C         -         ug   g 


mirna_id: hsa-mir-487b
hairpin:
u       ug        uuau      c u     uuuug 
 ugguacu  gagagugg    cccugu c guucg     c
 |||||||  ||||||||    |||||| | |||||      
 acuauga  uuUUCACC    GGGACA G UAAgc     u
a       cu        UACU      U C     uguac 


mirna_id: mmu-mir-367
hairpin:
   -                CA     C    uugaa 
agg ccgucACUGUUGCUAA  UGCAA UCug     u
||| ||||||||||||||||  ||||| ||||      
ucc gguAGUGGUAACGAUU  ACGUU Aggu     a
   a                UC     A    uaaag 


mirna_id: mmu-mir-494
hairpin:
u       u            GU      -   C   -  uuu 
 ugauacu gaaggagAGGUU  CCGUGU UGU UUC UC   a
 ||||||| ||||||||||||  |||||| ||| ||| ||   u
 acuauga uuuuuuCUCCAA  GGCACA ACA AAG ag   u
a       -            AG      U   -   U  uau 


mirna_id: mmu-mir-376c
hairpin:
u   gu   u    g     UA     U         --u  u 
 uug  auu aaaa GUGGA  UUCCU CUAUGUUUA   gc u
 |||  ||| |||| |||||  ||||| |||||||||   || u
 aac  uga uuuU CACUU  AAGGA GAUACAAau   ug u
a   ug   c    G     UA     -         uag  u 


mirna_id: mmu-mir-487b
hairpin:
u      ug        UUAU      C UC    - uuc 
 gguacu  gagagUGG    CCCUGU C  UUCG c   a
 ||||||  ||||||||    |||||| |  |||| |   c
 cuauga  uuUUCACC    GGGACA G  AAgc g   u
a      cu        UACU      U CU    c uac 


mirna_id: mmu-mir-369
hairpin:
      u  ag               UA      Cuu g 
gguacu ga  ggAGAUCGACCGUGU  UAUUCG   g c
|||||| ||  |||||||||||||||  ||||||   | u
cuauga cu  UUUCUAGUUGGUACA  AUAAgc   c g
      -  cu               UA      -uu a 


mirna_id: mmu-mir-20b
hairpin:
c    u     -CA           G     G   uuuuu 
 cuag agugc   AAGUGCUCAUA UGCAG UAG     a
 |||| |||||   ||||||||||| ||||| |||     u
 gguc ucauG   UUCACGAGUGU ACGUC Auc     a
-    c     AUC           G     -   ucacc 


mirna_id: mmu-mir-450a-2
hairpin:
       UUU     U              uac 
gaacuau   UGCGA GUGUUCCUAAUAUg   u
|||||||   ||||| ||||||||||||||   a
cuuggUA   ACGUU CGUAGGGGUUAuau   u
       CUU     U              gag 


mirna_id: mmu-mir-503
hairpin:
     UA    C            G   u a  gu 
ugccc  GCAG GGGAACAGUACU CAG g gu  u
|||||  |||| |||||||||||| ||| | ||  u
augGG  CGUC CCUUUGUUAUGA guc c cg  g
     UC    A            G   - -  ug 


mirna_id: mmu-mir-291b
hairpin:
        u u   U         G  - C CU    gg 
acauacag g cGA CAAAGUGGA GC C U  CCgc  c
|||||||| | ||| ||||||||| || | |  ||||   
uguguguc c GUU GUUUUACCU CG G A  ggcg  u
        u U   U         A  U A Ag    gu 


mirna_id: rno-mir-493
hairpin:
   cuc        U                    cau   u 
ggc   cagggccU GUACAUGGUAGGCUUUCAUU   ugu u
|||   |||||||| ||||||||||||||||||||   |||  
ccg   gucccgGA CGUGUGUCAUCUGGAAGUgg   aca g
   --u        C                    cuu   c 


mirna_id: rno-mir-379
hairpin:
u  uuc   c    g    A       GA       -  uua 
 gg   cug agag UGGU GACUAUG  ACGUAGG cg   u
 ||   ||| |||| |||| |||||||  ||||||| ||   g
 cc   gac ucuC AUCA CUGGUAC  UGUAUCc gu   u
a  uau   -    A    C       AA       a  cuu 


mirna_id: rno-mir-494
hairpin:
u      u            GU      -   C   -  uuu 
 gauacu gaaggagAGGUU  CCGUGU UGU UUC UC   a
 |||||| ||||||||||||  |||||| ||| ||| ||   u
 cuauga uuuuuUCUCCAA  GGCACA ACA AAG ag   u
a      -            AG      U   -   U  uau 


mirna_id: rno-mir-376c
hairpin:
u  gu   u    g     UA     U         uggua 
 ug  auu aaaa GUGGA  UUCCU CUAUGUUUa     u
 ||  ||| |||| |||||  ||||| |||||||||     u
 ac  uga uuuU CACUU  AAGGA GAUACAAau     u
a  ug   c    G     UA     -         uagua 


mirna_id: rno-mir-376b
hairpin:
u        u           A     U         cgug  u 
 uugguauu aaaagGUGGAU UUCCU CUAUGGUUA    cu c
 |||||||| ||||||||||| ||||| |||||||||    ||  
 aacuauga uuuUUCACCUA AAGGA GAUACUAau    gg c
a        c           C     -         ---a  u 


mirna_id: rno-mir-376a
hairpin:
u      u    G  A    C    U      Guacaaua 
 gauauu aaaa GU GAUU UCCU CUAUGA        u
 |||||| |||| || |||| |||| ||||||        u
 cuauga uuuU CA CUAA AGGA GAUGCU        a
a      c    G  C    A    -      Aaucagua 


mirna_id: rno-mir-381
hairpin:
  C   G        U        --g   u 
AG GAG UUGCCCUU GUAUAUuc   guu a
|| ||| |||||||| ||||||||   |||  
uc CUC AACGGGAA CAUAUagg   cag u
  U   G        -        gua   u 


mirna_id: rno-mir-487b
hairpin:
u      ug        UUAU      C UC    - uuc 
 gguacu  gagAGUGG    CCCUGU C  UUCG c   a
 ||||||  ||||||||    |||||| |  |||| |   c
 cuauga  uuUUCACC    GGGACA G  AAgc g   u
a      cu        UACU      U CU    c uau 


mirna_id: rno-mir-382
hairpin:
      u       -A           UG      - uuu 
gguacu gaagaGA  GUUGUUCGUGG  GAUUCG c   a
|||||| |||||||  |||||||||||  |||||| |   c
ccauga cuuuuUU  CAACAGGCACU  CUAAgc g   u
      -       CA           UA      a ugu 


mirna_id: rno-mir-485
hairpin:
      u         CU       -    A    auuc 
gauacu ggagAGAGG  GGCCGUG AUGA UUCg    a
|||||| |||||||||  ||||||| |||| ||||    u
cuguga CUUCUCUCC  UCGGCAC UACu gagc    c
      u         UC       A    -    aaau 


mirna_id: rno-mir-409a
hairpin:
     u       A    AC         -    - AUc 
gguac cggagag GGUU  CCGAGCAAC UUUG C   u
||||| ||||||| ||||  ||||||||| |||| |    
cuaug gcuuuuC CCAA  GGCUCGUUG AAgc g   g
     -       C    GU         U    a gag 


mirna_id: rno-mir-369
hairpin:
      u  ag               UA      Cuu  c 
gguacu ga  ggAGAUCGACCGUGU  UAUUCG   ag u
|||||| ||  |||||||||||||||  ||||||   ||  
cuauga cu  UUUCUAGUUGGUACA  AUAAgc   uc g
      -  cu               UA      --u  a 


mirna_id: rno-mir-374
hairpin:
      ug AU          C          u 
cucgga  g  AUAAUACAAC UGCUAAGUGu c
||||||  |  |||||||||| ||||||||||  
gagccu  U  UAUUAUGUUG ACGAUUCacg u
      gU AU          C          a 


mirna_id: rno-mir-363
hairpin:
      u   au         CA  A         ga  ag g 
uuuugc guu  CGGGUGGAU  CG UGCAAUUUu  uu  a u
|||||| |||  |||||||||  || |||||||||  ||  |  
aggacg caa  GUCUACCUA  GC ACGUUAAag  ag  u a
      c   aU         UG  -         ag  gg a 


mirna_id: rno-mir-20b
hairpin:
gu       -           G     G   -  uuu 
  agugcCA AAGUGCUCAUA UGCAG UAG gu   g
  ||||||| ||||||||||| ||||| ||| ||    
  ucauGGU UUCACGAGUGU ACGUC Auc ca   c
-c       C           G     -   u  cgu 


mirna_id: rno-mir-503
hairpin:
     UA                 G   u a  gu 
ugccc  GCAGCGGGAACAGUACU CAG g gu  u
|||||  ||||||||||||||||| ||| | ||  u
augGG  CGUCGCCUUUGUUAUGA Guc c cg  g
     UC                 G   - -  ug 


mirna_id: hsa-mir-551a
hairpin:
ggggacug  -   ug            c         ggg   -  ucug 
        cc ggg  acccuggaaauc agagugggu   gcc ag    a
        || |||  |||||||||||| |||||||||   ||| ||    c
        gg ccc  ugggACCUUUGG UCUCACCCA   CGg uc    c
-----aaa  u   gu            U         --G   a  uuug 


mirna_id: hsa-mir-552
hairpin:
aaccauucaa                      uu ug        uu aa 
          auauaccacaguuuguuuaacc  u  ccuguugg  g  g
          ||||||||||||||||||||||  |  ||||||||  |  a
          uauauggugucaAACAGAUUGG  A  GGACAAcu  c  u
-------aca                      UC GU        uu cg 


mirna_id: hsa-mir-553
hairpin:
cuucaau    u                   G  UU 
       uuua uuuAAAACGGUGAGAUUUU UU  g
       |||| ||||||||||||||||||| ||   
       gagu agauuuugucgcucuaaaa ag  u
------g    c                   g  uc 


mirna_id: hsa-mir-554
hairpin:
-----a  u   uaaccuu      --------          --      a   g 
      cc gag       uGCUAG        UCCUGACUCA  GCCAGU cug u
      || |||       ||||||        ||||||||||  |||||| |||  
      gg cuc       acgguu        gggacugggu  ugguca gau c
ucuacg  u   --ucucu      uuauacuu          ag      -   u 


mirna_id: hsa-mir-92b
hairpin:
c     cc   c    g     GA       C            uuuuu 
 gggcc  ggg gggc ggAGG  CGGGACG GGUGCAGUGuug     u
 |||||  ||| |||| |||||  ||||||| ||||||||||||     c
 cccgg  ccc cccg CCUCC  GCCCUGC UCACGUUAUaac     c
-     -c   -    g     -G       -            cgccc 


mirna_id: hsa-mir-555
hairpin:
-------     gaac     u  gg   ac      u  ga    u  gac 
       ggagu    ucaga gu  agc  uaccuu gu  gcag gu   c
       |||||    ||||| ||  |||  |||||| ||  |||| ||    
       ucuca    AGUCU CA  UCG  AUGGGA ca  uguc cg   c
uaucuag     aaaU     C  AG   -A      -  gg    -  gaa 


mirna_id: hsa-mir-556
hairpin:
-------ga                     C  U          cuucau 
         uaguaauaagaaaGAUGAGCU AU GUAAUAUGAG      u
         ||||||||||||||||||||| || ||||||||||       
         aucauuauuuUUUCUACUCGA UA CAUUAUAcuu      u
acaacuucc                     U  C          uacaua 


mirna_id: hsa-mir-557
hairpin:
agaaugggcaaaugaacaguaaa  ug     cu       u   -   ---u   g 
                       uu  gaggc  ggggccc ccc ugc    gcu g
                       ||  |||||  ||||||| ||| |||    ||| a
                       aa  uUCUG  UUCCGGG GGG ACG    uga g
-------------agguggagga  gu     --       U   C   UUUG   a 


mirna_id: hsa-mir-558
hairpin:
gugugugu  g   g      u                  ua  cu     
        gu ugu uguggu auuuugguauaguagcuc  ga  cuau 
        || ||| |||||| ||||||||||||||||||  ||  ||| u
        cg gca acacca UAAAACCAUGUCGUCGAG  cu  gaua 
------gu  g   a      -                  Uc  uu     


mirna_id: hsa-mir-559
hairpin:
-----                                     ------   u 
     gcuccaguaacaucuUAAAGUAAAUAUGCACCAAAAu      uac u
     |||||||||||||||||||||||||||||||||||||      ||| u
     cgaggucauuguaggauuucauuuauacgugguuuug      aug u
acccu                                     acauaa   g 


mirna_id: hsa-mir-561
hairpin:
cuucauccaccag            A                     agag 
             uccuccaggaac UCAAGGAUCUUAAACUUUGCC    c
             |||||||||||| |||||||||||||||||||||    u
             aggggguccuUG AGUUCCUAGAAUUUGAAACgg    a
--------uacca            A                     aaac 


mirna_id: hsa-mir-562
hairpin:
agugaa       -----   -  u     -   u       ua   u   u u 
      auugcua     ggu ca auggu cag cuacuuu  gag aau g g
      |||||||     ||| || ||||| ||| |||||||  ||| ||| | a
      uaacggu     uca GU UACCA GUC GAUGAAA  cuu uug c a
------       guccc   C  U     U   -       --   u   u a 


mirna_id: hsa-mir-563
hairpin:
agcaaagaag  u      cucua              cu       
          ug guugcc     ggaaauguguguug  cugaug 
          || ||||||     ||||||||||||||  ||||| u
          ac cgaugg     CCUUUGCAUACAGU  GAuuaa 
----------  -      ---uC              UG       


mirna_id: hsa-mir-564
hairpin:
---c   -ca    g   cA           A  ----    aaca     g 
    ggg   gcgg ugc  GGCACGGUGUC GC    AGGC    uggcc a
    |||   |||| |||  ||||||||||| ||    ||||    |||||  
    ccc   cgcc gcg  cugugccgcgg cg    uccg    gccgg g
cagu   aug    a   -c           -  ggcc    --gg     a 


mirna_id: hsa-mir-566
hairpin:
----------------gcuagg  u   gg      --C    GA     A  a u 
                      cg ggu  cGGGCG   CUGU  UCCCA Cu c c
                      || |||  ||||||   ||||  ||||| || |  
                      gc cca  guucgc   gacg  ggggu gg g a
cgagugacguuggaagcggagg  -   -a      uaa    ac     c  a g 


mirna_id: hsa-mir-567
hairpin:
------------ggauucuua   gacA              G      ---  u 
                     uag    GUAUGUUCUUCCAG ACAGAA   Ca u
                     |||    |||||||||||||| ||||||   || c
                     auc    cguacaagaagguc uguuuu   gu u
ucguuauugaaaaaaaaaaaa   aaaa              a      auc  u 


mirna_id: hsa-mir-568
hairpin:
--g        -     u        A         ACuucc       a 
   auauacac uauau AUGUAUAA UGUAUACAC      uauaugu u
   |||||||| ||||| |||||||| |||||||||      |||||||  
   uaugugug auaug uacauauu auauaugug      auauaca c
gua        g     -        -         --auau       c 


mirna_id: hsa-mir-551b
hairpin:
agaugugc    c     ca          CG     - -AGA    gug 
        ucuc uggcc  uGAAAUCAAG  UGGGU G    CCug   c
        |||| |||||  ||||||||||  ||||| |    ||||    
        agag gucgg  ACUUUGGUUC  ACCCA C    gggc   a
----aaua    u     aG          AU     G Ggaa    aag 


mirna_id: hsa-mir-569
hairpin:
-    uu    ga        g     --       aac   aucagaa 
 ggua  guua  uuaauuuu uggga  cauuaac   agc       g
 ||||  ||||  |||||||| |||||  |||||||   |||        
 uuau  cagu  aauUGAAA GUCCU  GUAAUUG   ucg       c
u    uu    -g        G     AA       Auu   acuacaa 


mirna_id: hsa-mir-570
hairpin:
cuagauaag         g                 A      C C      
         uuauuaggu ggugcAAAGGUAAUUGC GUUUUU C auuau 
         ||||||||| ||||||||||||||||| |||||| | |||| u
         gguagucca ccaCGUUUCCAUUAACG CAAAAG g uaauu 
------uga         a                 A      C u      


mirna_id: hsa-mir-571
hairpin:
ccuc      ----a  aa      -  u    u   -cuu        cc 
    aguaag     cc  gcucag ug gcca uuc    gucuguag  a
    ||||||     ||  |||||| || |||| |||    ||||||||   
    uuauuc     gG  UGAGUC AC CGGU GAG    cggguauc  u
-auc      guccg  AG      U  -    U   Uucu        ug 


mirna_id: hsa-mir-572
hairpin:
gucgaggccguggcccggaaguggucg          -       -a     c 
                           gggccgcugc gggcgga  gggcg c
                           |||||||||| |||||||  |||||  
                           CCCGGUGGCG CUCGCCU  uucgu u
-----------agggcgcccggaccgA          G       Gc     g 


mirna_id: hsa-mir-573
hairpin:
-uuu   -gg    u      --      GU      -G      au u  u 
    agc   uuuc ccCUGA  AGUGAU  GUAACU  AUCAGg  c ac c
    |||   |||| ||||||  ||||||  ||||||  ||||||  | ||  
    uug   ggag gggacu  ucgcug  uauuga  ugguuu  g ug a
guuu   aga    u      gu      --      aa      cu c  u 


mirna_id: hsa-mir-574
hairpin:
gggaccug g      c         A U                 Ug  gc 
        c ugggug gggcgugUG G GUGUGUGUGUGAGUGUG  uc  u
        | |||||| ||||||||| | |||||||||||||||||  ||   
        g acucac cccgcACAC C CACACACGUACUCGCAC  gg  c
-------- g      a         - -                 cu  gc 


mirna_id: hsa-mir-575
hairpin:
---------aauuca  -    -   -         -  -  u   --        
               gc ccug cca cuggcuuau gu ca gac  cuugggc 
               || |||| ||| ||||||||| || || |||  |||||| u
               CG GGAC GGU GACCGAGua ca gu cug  ggacuca 
cucaacucaccguga  A    A   U         a  c  -   uc        


mirna_id: hsa-mir-576
hairpin:
--------ua     c  c              C            g   ua 
          caauc aa gaggAUUCUAAUUU UCCACGUCUUUg uaa  a
          ||||| || |||||||||||||| |||||||||||| |||   
          guuag uu cucCUAAGGUUAAA AGGUGUAGAAac guu  g
accaauauug     c  a              A            g   ug 


mirna_id: hsa-mir-577
hairpin:
-----------                       A      U     augaa 
           ugggggagugaagagUAGAUAAA UAUUGG ACCUG     u
           ||||||||||||||||||||||| |||||| |||||     c
           accccuuuacuucucgucuauuu auaacu uggac     u
cauucaucuau                       c      u     cggag 


mirna_id: hsa-mir-578
hairpin:
agauaaauc                   cg  ca          ccu      
         uauagacaaaauacaaucc  ga  acaagaagcu   auagc 
         |||||||||||||||||||  ||  ||||||||||   |||| u
         auauuuguuuuaUGUUAGG  CU  UGUUCUUCga   ugucc 
------uau                   AU  CG          ---      


mirna_id: hsa-mir-579
hairpin:
cauauuag   a                                cg     aa 
        guu augcaaaaguaaucgcgguuugugccagauga  auuug  u
        ||| ||||||||||||||||||||||||||||||||  |||||   
        caa uacguuuuuaUUAGCGCCAAAUAUGGUUUACU  Uaaau  u
--------   c                                --     aa 


mirna_id: hsa-mir-580
hairpin:
auaa      ca                      ga          uaa 
    aauuuc  auuggaaccuaaugauucauca  cucagauauu   g
    ||||||  ||||||||||||||||||||||  ||||||||||   u
    uuaaag  uggccuuGGAUUACUAAGUAGU  GAGUUuauga   u
----      ac                      AA          caa 


mirna_id: hsa-mir-581
hairpin:
-------   a    a          -       C       G   uuuua 
       guu ugug agguauUCUU GUGUUCU UAGAUCA Ugc     g
       ||| |||| |||||||||| ||||||| ||||||| |||     a
       caa acac uccauaagaa cacaaga aucuagu gug     a
cguccac   g    a          a       a       -   uuuaa 


mirna_id: hsa-mir-582
hairpin:
----------auc  ug       aUUA                   Uaaucu 
             ug  cucuuug    CAGUUGUUCAACCAGUUAC      a
             ||  |||||||    |||||||||||||||||||       
             ac  gggaaac    GUCAACAAGUUGGUCAAUg      a
uuacaaagaugaa  gu       CCAA                   uuaauc 


mirna_id: hsa-mir-583
hairpin:
aacucacacauua          A        U      -     
             acCAAAGAGG AGGUCCCA UACugc aggg 
             |||||||||| |||||||| |||||| ||| a
             ugguuucucc uccagggu augacg uucu 
-------------          a        c      a     


mirna_id: hsa-mir-584
hairpin:
-------     u         UUA     U            G a   ug 
       uaggg gaccagcca   UGGUU GCCUGGGACUGA g auu  c
       ||||| |||||||||   ||||| |||||||||||| | |||   
       guccc cugguuggU   ACCAA CGGACCUUGACU u uag  u
caacgaa     u         CGG     C            g a   gg 


mirna_id: hsa-mir-585
hairpin:
uggggugucug  c                c              a aaag 
           ug uauggcagcccuagca acagauacgcccag g    c
           || |||||||||||||||| |||||||||||||| |     
           ac augucgucgggAUCGU UGUCUAUGCGGGUu c    c
----------a  a                A              g aagu 


mirna_id: hsa-mir-548a-1
hairpin:
---ug    gagguauuaag                   g u     c a   a 
     cagg           uuggugcaaaaguaauugu a uuuug c uua a
     ||||           ||||||||||||||||||| | ||||| | |||  
     gucc           aaccaCGUUUUCAUUAACG U AAAAC g aau a
uuaug    ----------a                   G C     a c   g 


mirna_id: hsa-mir-586
hairpin:
----------au     --                           U    au 
            ggggu  aaaaccauUAUGCAUUGUAUUUUUAGG CCca  a
            |||||  ||||||||||||||||||||||||||| ||||  c
            ucuca  uuuugguaauacguaacauaaaaaucc gggu  a
uauucuucuauu     cu                           c    gu 


mirna_id: hsa-mir-587
hairpin:
cucc    -cacccu        A                gcu    ga 
    uaug       cUUUCCAU GGUGAUGAGUCACagg   cagg  a
    ||||       |||||||| ||||||||||||||||   ||||  u
    auac       gaaaggug ccacuacucagugucc   gucu  g
---u    ccuaccc        a                -ac    gu 


mirna_id: hsa-mir-548b
hairpin:
cagacuauauau                       U      G   uuuau 
            uuagguuggcgcAAAAGUAAUUG GGUUUU GCC     u
            ||||||||||||||||||||||| |||||| |||      
            aauccaaccgUGUUUUCGUUGAC CCAAGA Cgg     u
-------uucau                       U      A   uaacu 


mirna_id: hsa-mir-588
hairpin:
ag       a       -     CAA     U       uau 
  cuuaggu ccaauUU GGCCA   UGGGU AGAACac   u
  ||||||| ||||||| |||||   ||||| |||||||   c
  gaauccg gguuaaa ccggu   accca ucuugug   c
--       -       a     acc     u       uua 


mirna_id: hsa-mir-548a-2
hairpin:
ugugaug        guuu               -g     uu        a 
       uguauuag    gugcaaaaguaauug  gguuu  ugccguua a
       ||||||||    |||||||||||||||  |||||  ||||||||  
       auauaauc    caCGUUUUCAUUAAC  UCAAA  ACgguaau a
------a        aaac               GG     --        g 


mirna_id: hsa-mir-589
hairpin:
ucca   ugu  cca     cc   A     -A   C  C       u   u 
    gcc   gc   gcagc  cUG GAACC  CGU UG UCUGAGc ggg a
    |||   ||   |||||  ||| |||||  ||| || ||||||| ||| c
    cgg   cg   cgucg  GAC CUUGG  GUA AC AGACUug ucc u
---c   --u  -ac     cA   C     CC   A  A       -   g 


mirna_id: hsa-mir-550a-1
hairpin:
u  u    u c   cu   gcA                  G C     gu 
 ga gcuu g ugg  ggu   GUGCCUGAGGGAGUAAGA C Cuguu  u
 || |||| | |||  |||   |||||||||||||||||| | |||||  g
 cu ugaa c acc  cUA   CACGGACUCCCUCAUUCU G gauag  u
u  c    - a   -u   ---                  - U     aa 


mirna_id: hsa-mir-550a-2
hairpin:
ugaugcuuu   g     u cA                  G C     gu 
         gcu gcugg g  GUGCCUGAGGGAGUAAGA C Cuguu  u
         ||| ||||| |  |||||||||||||||||| | |||||  g
         uga cgacc c  CACGGACUCCCUCAUUCU G gauag  u
-----ucuc   g     u UA                  - U     ac 


mirna_id: hsa-mir-590
hairpin:
--------uagc        a  G       U       G     ua   u 
            cagucaga au AGCUUAU CAUAAAA UGCAG  ugg g
            |||||||| || ||||||| ||||||| |||||  ||| a
            guuagucu UG UCGAAUA GUAUUUU AUguc  acu a
acgacguacaaa        c  A       U       A     ua   g 


mirna_id: hsa-mir-591
hairpin:
----ucuuaucaa    gu   -   U  -    U  UUG    ---a  g 
             ugag  AGA CCA GG GUUC CA   Uaau    gu u
             ||||  ||| ||| || |||| ||   ||||    || a
             acuc  ucu ggu cc cagg gu   auug    ua g
cuuagucaucuaa    ug   c   c  u    u  -ca    guug  a 


mirna_id: hsa-mir-592
hairpin:
---------ua     c     ca        A    C        gu    a 
           uuaug cauga  UUGUGUCA UAUG GAUGAUGU  ugug u
           ||||| |||||  |||||||| |||| ||||||||  ||||  
           aaugc guacu  aacgcagu gugc cuacugcg  acac g
caacacugcag     a     ac        g    a        --    g 


mirna_id: hsa-mir-593
hairpin:
-------c      aaucugu    C  C    A     UG   AGCcc       u 
        ccccag       cAGG AC AGCC GGCAU  CUC     guuuccc c
        ||||||       |||| || |||| |||||  |||     |||||||  
        GGGGUC       GUCU UG uugg ucgug  gag     cgagggg u
uccUCUUU      -------    C  U    g     gu   --gaa       g 


mirna_id: hsa-mir-595
hairpin:
-ac  --aag   g  c  auuua      --       -    g ag   u 
   gg     ccu ca gc     acacca  gcacgcu caau u  ucu g
   ||     ||| || ||     ||||||  ||||||| |||| |  ||| u
   cc     gga gU UG     UGUGGU  CGUGUGA Guug a  agg a
ugu  gcgaa   g  C  -----      GC       A    g ca   a 


mirna_id: hsa-mir-596
hairpin:
agca     uc       CCU  -C     -  --U     ac 
    cggcc  uccgAAG   GC  CGGCU CC   CGGGa  c
    |||||  |||||||   ||  ||||| ||   |||||  u
    gccgg  aggcuuc   cg  gucga gg   gcccu  g
----     --       --c  uc     c  uac     cc 


mirna_id: hsa-mir-597
hairpin:
u   --          -----g  U     UC  U         gaag   gu 
 acu  uacucuacgu      UG GUCAC  GA GACCACUGU    aca  a
 |||  ||||||||||      || |||||  || |||||||||    |||   
 ugg  augagaugua      ac cggug  cu uuggugaca    ugu  a
c   uc          augcga  u     uu  c         ----   aa 


mirna_id: hsa-mir-598
hairpin:
gcuugaugaugcugcugaugcu         cc     gu  g   uggaa 
                      ggcggugau  cgaug  gu agc     a
                      |||||||||  |||||  || |||      
                      CUGCUACUG  GCUAC  CA Ucg     u
------gagccuacuacuacuA         UU     UG  -   ugggg 


mirna_id: hsa-mir-599
hairpin:
aaagacaugcu     c     --                 gg     -   u 
           gucca agugu  guuugauaagcugacau  gacag gga u
           ||||| |||||  |||||||||||||||||  ||||| ||| c
           uaggu ucaua  CAAACUAUUUGACUGUG  UUGuc cuu u
--------cag     -     cc                 --     a   u 


mirna_id: hsa-mir-548a-3
hairpin:
ccuagaaugu     g  c                 G      A     ac 
          uauua gu ggugcAAAAGUAAUUGC AGUUUU CCauu  u
          ||||| || ||||||||||||||||| |||||| |||||   
          auaau ca ccaCGUUUUCAUUAACG UCAAAA gguaa  u
-------uuc     g  a                 G      C     cu 


mirna_id: hsa-mir-600
hairpin:
aagucacgu  u u    cca    cau  g               c  gcagu 
         gc g ggcu   gcuu   ag aaggcucuugucugu ag     g
         || | ||||   ||||   || ||||||||||||||| ||      
         cg c ccga   cgga   UC UUCCGAGAACAGACA UC     g
-------cc  u -    --c    --C  G               U  Auuga 


mirna_id: hsa-mir-601
hairpin:
ugcaugag   gu  --U  U  --      G    A  -   ca 
        uuc  cu   GG CU  AGGAUU UUGG GG AGu  g
        |||  ||   || ||  |||||| |||| || |||  a
        agg  gg   cc ga  uccuag gacc cc uca  a
--------   ug  uuu  u  ag      g    -  a   aa 


mirna_id: hsa-mir-602
hairpin:
-----------uu   a   cc        C   C   -A   G       cu  g 
             cuc ccc  gccuGACA GGG GAC  GCU CGGCCCg  gu u
             ||| |||  |||||||| ||| |||  ||| |||||||  ||  
             gag ggg  cggacugu ccu cug  uga gccgggc  ca u
guccccccgagac   a   aa        -   -   cg   -       -u  c 


mirna_id: hsa-mir-603
hairpin:
gauugaugc      u    u                  cuuc     ua 
         uguugg uugg gcaaaaguaauugcagug    ccauu  a
         |||||| |||| ||||||||||||||||||    |||||  a
         auaauu aacc CGUUUUCAUUAACGUCAC    gguaa  a
------uuc      c    u                  ACAC     ug 


mirna_id: hsa-mir-604
hairpin:
------a  -    c  g     cc    a -  u  c     cacu   ag 
       ga gcau gu cuuga  uucc c gc cu guguc    agc  g
       || |||| || |||||  |||| | || || |||||    |||   
       cu cgug CA GGACU  AAGG G CG GA cacag    uug  c
agaggua  a    a  -     -U    C U  -  -     ucuu   ga 


mirna_id: hsa-mir-605
hairpin:
gc                   C              CU  gg 
  ccuagcuugguucUAAAUC CAUGGUGCCUUCUC  ug  a
  ||||||||||||||||||| ||||||||||||||  ||  a
  ggauugaacuaagauuuag guaucacggaagag  ac  a
--                   a              --  aa 


mirna_id: hsa-mir-606
hairpin:
------------      c                 u         a    ug 
            uguauc uugguuuuuaguaguuu acuaugaug ggug  c
            |||||| ||||||||||||||||| ||||||||| ||||  c
            acaUAG AACUAAAAGUCAUCAAA ugauacuac ccac  a
accaguccguga      A                 -         c    cu 


mirna_id: hsa-mir-607
hairpin:
uug                               g         g  c 
   ccuaaagucacacagguuauagaucuggauu gaacccagg ag c
   ||||||||||||||||||||||||||||||| ||||||||| || a
   ggguuucaguguguuCAAUAUCUAGACCUAA CUUGggucc uc g
---                               A         g  a 


mirna_id: hsa-mir-608
hairpin:
-gg   -aa g  g      -  UG  G  ---G   C     CGUuuaaaa 
   gcc   g ug gccAGG GG  GU UU    GGA AGCUC         a
   |||   | || |||||| ||  || ||    ||| |||||         g
   ugg   c ac ugguuc cc  cg aa    ccu ucgag         g
aga   aca g  g      u  gu  g  acua   -     aaccucuac 


mirna_id: hsa-mir-609
hairpin:
---ug   g                 U            gu    aaug 
     cuc gcuguuccuAGGGUGUU CUCUCAUCUCUg  cuau    g
     ||| ||||||||||||||||| ||||||||||||  ||||     
     gag cgacaaggaucccacaa gggaguagagau  gaua    g
ccaag   a                 c            --    aauu 


mirna_id: hsa-mir-610
hairpin:
-------       g     g                        ca      
       ucuauuu ucuua gUGAGCUAAAUGUGUGCUGGGAca  uuuga 
       ||||||| ||||| ||||||||||||||||||||||||  |||| g
       agguaaa agaau cacucgauuuacacacgacccugu  aaacc 
ugaucuc       a     a                        --      


mirna_id: hsa-mir-611
hairpin:
aaaau   g   g g        ag   -  gac 
     ggu aga c uugagggg  uuc ca   g
     ||| ||| | ||||||||  ||| ||    
     cCA UCU G GGCUCCCC  GAG Gu   g
-acac   G   - G        AG   C  aga 


mirna_id: hsa-mir-612
hairpin:
------   -ca     --a  c  CU   C          -        -a  a 
      ucc   ucugg   cc uG  GGG AGGGCUUCUG AGCUCCUU  gc c
      |||   |||||   || ||  ||| |||||||||| ||||||||  ||  
      agg   ggacc   gg ac  ccc ucccggggac ucggggag  cg u
acucuc   aca     gac  u  cu   -          c        ga  a 


mirna_id: hsa-mir-613
hairpin:
----    a   c  uuc    ugu        cc      ua    cuua 
    ggug gug gu   caag   gaagggac  uuccug  gugu    u
    |||| ||| ||   ||||   ||||||||  ||||||  ||||     
    ccac uac ca   GUUU   CUUCCUUG  AAGGAu  caua    a
auuu    a   u  -CC    ---        -U      ga    acau 


mirna_id: hsa-mir-614
hairpin:
ucuaagaaac     gg   -   aa     -           ---   cc 
          gcagu  ucu cug  gccug caggggcaggc   cag  c
          |||||  ||| |||  ||||| |||||||||||   |||  u
          cgucg  gga gac  UGGAC GUUCUUGUCCG   Guc  g
----------     uu   a   GG     C           CAA   ac 


mirna_id: hsa-mir-615
hairpin:
cuc   ag   c          -UC     U        Cu    g ug 
   ggg  ggg gggagGGGGG   CCCGG GCUCGGAU  cgag g  c
   |||  ||| ||||||||||   ||||| ||||||||  |||| |  u
   ccc  ccc cccUUCUCCC   GGGUC CGAGCCUg  gcuu u  u
ccc   aa   -          UCU     -        --    g ua 


mirna_id: hsa-mir-616
hairpin:
-------u     a       cA      A                -  gac 
        uaggu auuccuc  CUCAAA CCCUUCAGUGACUUcc au   a
        ||||| |||||||  |||||| |||||||||||||||| ||    
        gucca uaaggaG  GAGUUU GGGAGGUUACUGAagg ua   u
aaaauuuu     g       AC      -                a  aag 


mirna_id: hsa-mir-548c
hairpin:
cauuggcauc                         C         Cau   u 
          uauuagguuggugcAAAAGUAAUUG GGUUUUUGC   uac u
          ||||||||||||||||||||||||| |||||||||   ||| u
          auaauucaaccaCGUUUUCAUUAAC CUAAAAACg   aug c
-------uuc                         U         ---   a 


mirna_id: hsa-mir-617
hairpin:
---------------c    u         A     C              Ccau 
                auca aaggagccu GACUU CCAUUUGAAGGUGG    u
                |||| ||||||||| ||||| ||||||||||||||     
                uagu uuccucgga cugaa gguaaacuuccacc    u
cgaggaguaaauaacu    c         c     u              aucc 


mirna_id: hsa-mir-618
hairpin:
---cu  ug       -cc    U  A      C        guaau   -  a 
     cu  uucacag   AAAC CU CUUGUC UUCUGAGU     uac gu c
     ||  |||||||   |||| || |||||| ||||||||     ||| ||  
     ga  agguguc   uuug ga gaacag aggacucg     aug cg a
agucu  gu       cca    -  c      -        -----   a  u 


mirna_id: hsa-mir-619
hairpin:
-c  cc  -cu   ccucccaaaa       au          ag   cugc    ga 
  gc  ac   cag          ugcuggg  uacaggcaug  cca    gguc  c
  ||  ||   |||          |||||||  ||||||||||  |||    ||||   
  cg  ug   guc          aUGACCC  GUGUUUGUAC  GGU    CCAG  c
ga  uu  acu   ----------       --          -A   ----    ua 


mirna_id: hsa-mir-620
hairpin:
-----------aua   a          g            auau    aua 
              uau ucuauaucua cuccguauauau    auau   u
              ||| |||||||||| ||||||||||||    ||||    
              aUA AGAUAUAGAU GAGGUAuauaua    uaua   a
aagaaacgaacaaa   A          A            ccuc    gau 


mirna_id: hsa-mir-621
hairpin:
uagauuga   ---      u   u        g  c     u   cug   aa 
        gga   aggggc gag gguaggcg ug ugcug gcu   aug  g
        |||   |||||| ||| |||||||| || ||||| |||   |||   
        ccu   ucucug uuU CCAUUCGC AC ACGAU CGG   uac  a
--------   ggg      u   -        G  A     -   -ug   cc 


mirna_id: hsa-mir-622
hairpin:
-agagaag  -  aca   a  gg             a -  -  g   c 
        cu gg   agu cu  ucucagcagauug g ga ga cac a
        || ||   ||| ||  ||||||||||||| | || || |||  
        ga uc   uCG GG  GGAGUCGUCUGAC c cu cu gug c
ucacagua  g  --g   A  UU             A a  a  g   a 


mirna_id: hsa-mir-623
hairpin:
-guacaca     ag    CCU       GC       Uu  a   ua     
        guaga  cAUC   UGCAGGG  UGUUGGG  gc ucc  agcu 
        |||||  ||||   |||||||  |||||||  || |||  ||| g
        cguuu  guag   augucuc  guagccc  cg agg  ucgu 
gucuucca     cu    ---       au       uu  -   --     


mirna_id: hsa-mir-624
hairpin:
-----------                                   -- Ag  g 
           aaugcuguuucaaggUAGUACCAGUACCUUGUGUU  C  ug a
           |||||||||||||||||||||||||||||||||||  |  ||  
           uuacgauagaguUCCAUUAUGGUUAUGGAACACaa  g  ac a
gugaauccaca                                   au ga  c 


mirna_id: hsa-mir-625
hairpin:
                                     uaau 
aggguagagggaugAGGGGGAAAGUUCUAUAGUCCug    u
|||||||||||||||||||||||||||||||||||||    a
ucccgucucccuACUCCCCCUUUCAAGAUAUCAGgac    g
                                     ucua 


mirna_id: hsa-mir-626
hairpin:
acugauauauuu     auu     gc      g        u   au    au 
            gucuu   ugaga  ugagga uauuuuua gca  cuga  g
            |||||   |||||  |||||| |||||||| |||  ||||   
            cggaa   auuuu  acUUCU GUAAAAGU UGU  GAcu  a
----------uu     ---     -a      -        C   -C    cu 


mirna_id: hsa-mir-627
hairpin:
---------ua       c              U              ug u 
           cuuauua ugguaGUGAGUCUC AAGAAAAGAGGAgg  g u
           ||||||| |||||||||||||| ||||||||||||||  |  
           gaauaau accaucacucagag uucuuuucuccucc  u g
aucaucauaaa       a              u              uu u 


mirna_id: hsa-mir-628
hairpin:
auagcugu  u   a      cA  -   A   A             aaaa 
        ug guc cuuccu  UG CUG CAU UUUACUAGAGGgu    u
        || ||| ||||||  || ||| ||| |||||||||||||     
        ac cgg gaaggg  GC GAC GUG GAAUGAUCUucca    u
-------u  u   -      aA  U   G   A             auaa 


mirna_id: hsa-mir-629
hairpin:
ucccuuuccc                                   ac  u 
          aggggaggggcUGGGUUUACGUUGGGAGAACUuuu  gg g
          |||||||||||||||||||||||||||||||||||  ||  
          uccccucccCGACCCGAAUGCAACCCUCUUGgagg  cc a
----uccguc                                   -a  a 


mirna_id: hsa-mir-630
hairpin:
aacuuaacaucau       -     -   --c     uu         g 
             gcuaccu cuuug uau   auauu  guuauucug u
             ||||||| ||||| |||   |||||  |||||||||  
             ugaUGGA GGGAC AUG   UAUGA  caguaagac c
-uauaucaauucu       A     C   UCU     uc         a 


mirna_id: hsa-mir-631
hairpin:
gu      cc    uAGA      C   A  -      a 
  ggggag  uggu    CCUGGC CAG CC UCAGCu c
  ||||||  ||||    |||||| ||| || |||||| a
  ccucuc  accg    ggacug guc gg agucga c
--      ac    ---g      a   a  u      a 


mirna_id: hsa-mir-33b
hairpin:
-----  ---    -   c   c  -          UU         g   g 
     gc   gggc ggc ccg gG UGCAUUGCUG  GCAUUGCac ugu u
     ||   |||| ||| ||| || ||||||||||  ||||||||| ||| g
     cg   cccg ccg ggC CC ACGUGACGGC  CGUGACgug gcg a
cacca  guc    g   a   -  G          UC         g   g 


mirna_id: hsa-mir-632
hairpin:
-  c  c       a  g  ug            g  g    cga      
 cg cu cuaccgc gu cu  acgggaggcgga cg ggaa   ggccg 
 || || ||||||| || ||  |||||||||||| || ||||   |||| u
 gc ga gguggug cA GG  UGUCCUUCGUCU GU uuuu   ccggc 
u  c  u       -  G  --            -  G    --a      


mirna_id: hsa-mir-633
hairpin:
-aa    ucu    cucu    cuu     c              a   aaa 
   ccuc   uagc    guuu   uauug gguagauacuauua ccu   a
   ||||   ||||    ||||   ||||| |||||||||||||| |||   u
   ggag   guug    uaAA   AUAAC CCAUCUAUGAUAAU gga   g
aua    --u    ---u    ---     A              C   aga 


mirna_id: hsa-mir-634
hairpin:
aaacccacacc    c    ug  ca  g          -c     -   a    
           acug auuu  gc  uc aggguugggg  uuggu guc ugc 
           |||| ||||  ||  || ||||||||||  ||||| ||| || c
           ugau uagg  cg  AG UUUCAACCCC  GACCA uag acc 
---------uc    -    ua  aC  G          AC     A   a    


mirna_id: hsa-mir-635
hairpin:
caga a      gc  CU       U         UCC      cuuu   a 
    g ggagcu  cA  UGGGCAC GAAACAAUG   auuagg    guu u
    | ||||||  ||  ||||||| |||||||||   ||||||    ||| g
    c cuucga  gu  accugug uuuuguuac   uagucc    caa g
-uaa -      --  -u       -         ---      ucuu   a 


mirna_id: hsa-mir-636
hairpin:
--ug  g       cggga  gc           c   -cc   u  cu  aa 
    gc gccuggg     gc  gcgggcggggc ggc   cgc gc  gg  u
    || |||||||     ||  ||||||||||| |||   ||| ||  ||   
    cg cggaucc     cg  CGCCCGCCCUG UCG   GUG cg  cc  u
gcug  g       -----  -A           C   UUC   U  cc  aa 


mirna_id: hsa-mir-637
hairpin:
--------  -  ua  gu  -u      --   u     c   --   u  -  uc 
        ug gc  ag  gu  ggcucg  ggc cccca ugc  agu ac cc  c
        || ||  ||  ||  ||||||  ||| ||||| |||  ||| || ||  c
        ac cg  uc  CG  UCGGGC  UCG GGGGU Acg  uca ug gg  c
cuucauag  a  --  UG  UC      UU   -     C   ag   u  c  cu 


mirna_id: hsa-mir-638
hairpin:
gugagcg     g    GG U   G     -  --    -   ----Ua  -g   g 
       ggcgc gcAG  A CGC GGCGG GU  GGCG GCC      gg  cgc g
       ||||| ||||  | ||| ||||| ||  |||| |||      ||  ||| a
       ucgcg cguc  u gcg ccgcc cg  ccgc cgg      cc  gcg g
-------     g    aa -   g     g  ug    g   uaaggg  ag   g 


mirna_id: hsa-mir-639
hairpin:
------u   - gac g     g       ugga g    --    -      ag 
       ggc c   g ggcgc cgcggcc    g ggcg  gggc ggacgc  a
       ||| |   | ||||| |||||||    | ||||  |||| ||||||   
       ccg g   U UCGCG GCGUUGG    C UCGC  ucug uuugcg  g
gucgugu   a gga G     A       ---- G    UA    a      cc 


mirna_id: hsa-mir-640
hairpin:
------- ug   --cu     a       aa     gaca   ----     c 
       g  acc    gggca guuccug  gauca    cau    cagau c
       |  |||    ||||| |||||||  |||||    |||    ||||| c
       c  ugg    UCCGU CAAGGAC  CUAGU    gua    gucua u
gggguuc gu   caUC     C       --     Acgg   aaau     u 


mirna_id: hsa-mir-641
hairpin:
-u      a                    AG            ccucu u 
  ggguga aggaaggAAAGACAUAGGAU  AGUCACCUCugu     g c
  |||||| ||||||||||||||||||||  ||||||||||||     |  
  cccauu uccuuccuuucuguauccug  ucaguggagaua     c c
uc      c                    --            uccau u 


mirna_id: hsa-mir-642a
hairpin:
------------au             G                      ggu 
              cugaguugggagg UCCCUCUCCAAAUGUGUCUUGg   g
              ||||||||||||| ||||||||||||||||||||||   g
              ggcucaacccuCC AGGGAGAGGUUUACACAGAacu   g
uuacuaccgucucc             A                      agg 


mirna_id: hsa-mir-643
hairpin:
accaaguga      u                a        a   gg gu 
         uauuca ugucuaccugagcuag auacaagu guu  c  c
         |||||| |||||||||||||||| |||||||| |||  |  u
         guaagu auaGAUGGACUCGAUC UAUGUUCA cag  g  u
----aaaaa      u                G        -   -a ac 


mirna_id: hsa-mir-644a
hairpin:
uuuuuuuuuaguauuuuu     ag     a       u  ug u      u 
                  ccauc  uguuc uaaggaa gu  c cuguag u
                  |||||  ||||| ||||||| ||  | |||||| u
                  gguag  aCGAG AUUCUUU CG  G GAuauu u
-----------aucccuu     aa     -       -  GU U      c 


mirna_id: hsa-mir-645
hairpin:
caguuccuaac    c    ac             u   cu         
           aggc ucag  caguaccggucug ggc  ggggguug 
           |||| ||||  ||||||||||||| |||  ||||||| a
           uucg AGUC  GUCAUGGUCGGAU Ucg  uccccagg 
-gagagaaaaa    u    --             C   --         


mirna_id: hsa-mir-646
hairpin:
ga   -g      ---   ag     u    acacc      -  a    ug 
  uca  gagucu   gcc  uggag cagc     ugcuuu uc ccug  a
  |||  ||||||   |||  ||||| ||||     |||||| || ||||   
  ggu  cucgga   CGG  GUCUC GUCG     ACGAAg ag ggac  u
-c   ga      cuc   -A     C    -----      g  a    cc 


mirna_id: hsa-mir-647
hairpin:
---   aag g ug    G  G   C  U A        a     aggaa  c 
   agg   u u  gccu UG CUG AC C CUUCCUUC gcccc     gc u
   |||   | |  |||| || ||| || | |||||||| |||||     ||  
   ucc   g g  cggg ac gac ug g gagggagg cgggg     ug u
cag   --g g gu    -  g   -  - -        a     ---gc  g 


mirna_id: hsa-mir-648
hairpin:
au   aga   c   ----      G    ----     GG  -g     gg 
  cac   cac ucc    AAGUGU CAGG    GCACU  Ug  gggcc  g
  |||   ||| |||    |||||| ||||    |||||  ||  |||||   
  gug   gug agg    uucacg gucc    cguga  gc  cccgg  g
--   gga   a   cuga      -    agga     aa  ga     ac 


mirna_id: hsa-mir-649
hairpin:
ggcc    c      u  --        u      uu    gaaa     c 
    uagc aaauac gu  auuuuuga cgacau  gguu    aauau u
    |||| |||||| ||  |||||||| ||||||  ||||    |||||  
    gucg uuugug ca  UGAGAACU GUUGUG  CCAA    uuaug a
----    u      u  cC        U      -U    Auga     u 


mirna_id: hsa-mir-650
hairpin:
-----ca     ----------     cuc      C    -CU      A   ca 
       gugcu          ggggu   AGGAGG AGCG   CUCAGG Cgu  c
       |||||          |||||   |||||| ||||   |||||| |||  c
       cacgg          uccca   uccucc ucgu   gggucc gua  a
uagugga     gacucacucc     --c      -    cuc      g   cc 


mirna_id: hsa-mir-651
hairpin:
---------aau  a   c              A    GA       ucaaa 
            cu uca ugcuuUUUAGGAUA GCUU  CUUUUGu     u
            || ||| |||||||||||||| ||||  |||||||      
            ga agu acggaaaauccuau ugaa  gaaaacg     a
uuuguguaauuu  c   a              g    ag       uaaaa 


mirna_id: hsa-mir-652
hairpin:
acgaau  cua                  GAGAG           ca  g 
      gg   ugcacugcaCAACCCUAG     GGUGCCAUUCA  ua a
      ||   ||||||||||||||||||     |||||||||||  || c
      cc   acgugacGUGUUGGGAUC     CCGCGGUAAgu  au u
-cacau  aac                  ----A           ua  a 


mirna_id: hsa-mir-548d-1
hairpin:
aaacaaguua      g            U                uguaa 
          uauuag uuggugcAAAAG AAUUGUGGUUUUUGCC     a
          |||||| |||||||||||| ||||||||||||||||      
          auaauc gaccaCGUUUUC UUGACACCAAAAACgg     a
-------gaa      a            U                uaaug 


mirna_id: hsa-mir-661
hairpin:
ggaga    gu   g gg  -  g         u   -   u   uuc 
     ggcu  gcu u  gg ca gcgcaggcc gag ccc ggu   g
     ||||  ||| |  || || ||||||||| ||| ||| |||    
     ucgg  ugg g  uc gU CGCGUCCGG CUC GGG CCG   g
-----    --   g uu  a  G         U   U   U   Ucg 


mirna_id: hsa-mir-662
hairpin:
  ugu  a        a  ca    c     g     u    -g   g 
gc   ug ggcugcgc gc  ggcc ugacg ugggg ggcu  cgg c
||   || |||||||| ||  |||| ||||| ||||| ||||  ||| c
cg   gc cugacgcG CG  CCGG GUUGC ACCCU cugg  guc u
  -uu  a        A  AC    U     -     -    aa   u 


mirna_id: hsa-mir-548d-2
hairpin:
gagagggaagau                 U                    a 
            uuagguuggugcAAAAG AAUUGUGGUUUUUGCCauug a
            ||||||||||||||||| ||||||||||||||||||||  
            aauccaaccaCGUUUUC UUGACACCAAAAACgguaau a
-------aaaau                 U                    g 


mirna_id: hsa-mir-663a
hairpin:
-ccuu    c   -     -C  G   -        --     c   ug 
     ccgg guc ccAGG  GG GCG CCGCGGGA  CCGCc ucg  u
     |||| ||| |||||  || ||| ||||||||  ||||| |||   
     ggcc cgg ggucc  uu ugc ggcgcccu  ggugg ggu  c
guacc    -   u     uu  g   c        ag     c   gu 


mirna_id: hsa-mir-449b
hairpin:
---------uga  u   u     A     U   UU   A C        u  gu 
            cc gaa caggu GGCAG GUA  GUU G UGGCugcu gg  c
            || ||| ||||| ||||| |||  ||| | |||||||| ||   
            gg cuu guUCA CCGUC CAU  CAA C ACCGACga cu  a
ucuucuuaaaua  u   c     -     C   --   - -        -  ga 


mirna_id: hsa-mir-653
hairpin:
-----------u      cuu              U     C     cagcu 
            ucauuc   caGUGUUGAAACAA CUCUA UGaac     u
            ||||||   |||||||||||||| ||||| |||||     c
            aguaag   guuauaacuuuguu gaggu acuug     a
cgaagguagaau      aac              u     c     aacaa 


mirna_id: hsa-mir-411
hairpin:
--------------       ug   a a    A      A A       - uuu 
              ugguacu  gag g UAGU GACCGU U GCGUACG c   a
              |||||||  ||| | |||| |||||| | ||||||| |   u
              acuauga  cuc C AUCA CUGGCA A UGUAUgc g   c
gagccccuaccuaa       --   C A    C      C A       a ugu 


mirna_id: hsa-mir-654
hairpin:
    aagugg    a      G C     A      - -  a 
gggu      aaag UGGUGG C GCAGA CAUGUG C ug g
||||      |||| |||||| | ||||| |||||| | ||  
cccg      uUUC ACUACC G CGUCU GUAUac g gc u
    --aaga    C      A U     -      c u  u 


mirna_id: hsa-mir-655
hairpin:
aacuaugcaag      ug           u      ua      cuuca 
           gauauu  aggagagguua ccgugu  uguucg     u
           ||||||  ||||||||||| ||||||  ||||||      
           cuauaa  uUUUCUCCAAU GGUACA  AUAagu     u
-----cucaga      gu           U      UA      acuac 


mirna_id: hsa-mir-656
hairpin:
----------cu    u      c     ag       cuu  u 
            gaaa agguug cugug  guguuca   uc a
            |||| |||||| |||||  |||||||   || u
            cuuU UCCAAC GACAU  UAUAAgu   ag a
cuaagcuauagc    C      U     AU       ---  u 


mirna_id: hsa-mir-549a
hairpin:
agacaugcaacucaaga                                ucu 
                 auauauugagagcucauccauaguugucacug   c
                 ||||||||||||||||||||||||||||||||    
                 uauauaauUCUCGAGUAGGUAUCAACAGUgac   a
----------cggaccc                                uaa 


mirna_id: hsa-mir-657
hairpin:
guguaguagagcua        --   u        agcguggaccgguccgggu 
              ggaggaga  ggg ccuggaga                   g
              ||||||||  ||| ||||||||                   g
              ucuccucu  ccc GGAUCUCU                   g
-------------g        ua   c        CCCACUCUUGGACGGccuu 


mirna_id: hsa-mir-658
hairpin:
g    g  g   - g --uu       --  g   gc     --agc   c  a 
 cucg uu ccg u g    gcgggcc  cu ccc  ccgcc     ucg ug c
 |||| || ||| | |    |||||||  || |||  |||||     ||| ||  
 gagc aa ggc g c    UGCCUGG  GA GGG  GGCGG     agc ac a
g    -  g   u g UGGU       AU  A   -A     gacuc   -  g 


mirna_id: hsa-mir-659
hairpin:
uaccgacccuc   uug   cA                         uc 
           gau   guu  GGACCUUCCCUGAACCAAGGAagag  a
           |||   |||  |||||||||||||||||||||||||  c
           cug   caA  CCUGGGAGGGACUUGGUUCcuucuc  a
----gguacuc   uaa   CC                         ug 


mirna_id: hsa-mir-660
hairpin:
----------cu    c      -caUAC    U      C    U   gaau 
            gcuc uucucc      CCAU GCAUAU GGAG UGu    u
            |||| ||||||      |||| |||||| |||| |||    c
            cgag gggagg      GGUA CGUGUG CCUC Aca    u
gugcuacuguuc    u      acAUUA    -      U    C   aaac 


mirna_id: hsa-mir-421
hairpin:
----g    uu      -    uua            a   aaa 
     caca  guaggc cuca   aauguuuguuga uga   a
     ||||  |||||| ||||   |||||||||||| |||   a
     gugu  cgucCG GGGU   UUACAGACAACU Acu   u
cucua    cu      C    UAA            -   aag 


mirna_id: hsa-mir-542
hairpin:
----------caga        auc    GG    UCA         -A   c 
              ucucagac   UCGG  AUCA   UGUCACGAG  uac a
              ||||||||   ||||  ||||   |||||||||  |||  
              agggucug   AGUC  UAGU   ACAGUGUuc  gug g
acuucuacucaccg        gAA    AA    UAG         ac   u 


mirna_id: hcmv-mir-US4
hairpin:
            U   C   C  G   A    -     - ga 
cgugucgCGACA GGA GUG AG GGG Uguc ugucg c  u
|||||||||||| ||| ||| || ||| |||| ||||| |   
guacagcgcugu ucu cac uc ccc acag guagu g  a
            c   c   a  g   g    u     u ag 


mirna_id: hcmv-mir-UL70
hairpin:
        C      U     -AGA  -    a 
gguUGCGU UCGGCC CGUCC    cu ggcg u
|||||||| |||||| |||||    || |||| g
ccGGCGCG GGUCGG GUAGG    ga ccgc a
        C      -     GGga  g    g 


mirna_id: sv40-mir-S1
hairpin:
u     gac  u       GA     C      GA  C    gac 
 gaaca   ug gagggcU  GGGGC UGAAAU  GC UUga   u
 |||||   || |||||||  ||||| ||||||  || ||||   g
 cuugu   ac cuucUGA  UCCCG ACUUUG  CG aacu   u
u     ---  -       -G     U      UC  u    aag 


mirna_id: dre-mir-34b
hairpin:
--g      guc   A        U     C       --   a 
   ggguug   ugU GGCAGUGU GUUAG UGAUUGu  uuc u
   ||||||   ||| |||||||| ||||| |||||||  |||  
   uccaac   aca ccgucaua caauc acuaaua  aag a
aca      aac   a        c     -       uc   u 


mirna_id: dre-mir-31
hairpin:
ga           G   UU        -U  ua  g 
  agagauGGCAA AUG  GGCAUAGC  Gu  au u
  ||||||||||| |||  ||||||||  ||  ||  
  ucuuuaccguu uac  ccguaucg  cg  ua u
-g           a   cu        uc  gg  u 


mirna_id: dre-mir-135a
hairpin:
-----------aca    u     c   -      UU             a g ga 
              gcug cgugu uUA UGGCUU  UAUUCCUAUGUGA g u  a
              |||| ||||| ||| ||||||  ||||||||||||| | |   
              ugac gcaca aau accgaa  auagggauguacu c g  c
uuucgacuaaagac    -     -   c      -c             - g aa 


mirna_id: dre-mir-139
hairpin:
cug       -      A   G        -   u 
   uauUCUA CAGUGC UGU UCUccagu guu c
   ||||||| |||||| ||| |||||||| ||| u
   auaaggu gucgcg acg agggguca cgg a
-ca       u      -   g        g   u 


mirna_id: gga-mir-9-1
hairpin:
uu    u       c C       A       G     g   a 
  gggu gguuuuu U UUUGGUU UCUAGCU UAUGA ugu u
  |||| ||||||| | ||||||| ||||||| ||||| ||| g
  cucg ccaaaaa G AAGCCAA AGAUCGA AUacu aua u
cg    c       U U       G       A     -   g 


mirna_id: gga-mir-146b
hairpin:
----   ------cug      ug   uUG          U       -    aaagc 
    gga         gcugcu  gcu   AGAACUGAAU CCAUAGG CGuu     a
    |||         ||||||  |||   |||||||||| ||||||| ||||      
    ccu         cgacgg  uga   UCUUGACUUA GGUAUCC guaa     u
ccga   ccaaauaaa      gu   -CG          -       C    aaacc 


mirna_id: gga-mir-147
hairpin:
aauc   ug   u  c        aaacuugacu    a 
    uag  gaa ca uucugcac          acug a
    |||  ||| || ||||||||          ||||  
    auC  CUU GU AAGGCGUG          UGac a
uuac   GU   C  A        ----------    u 


mirna_id: gga-mir-193b
hairpin:
g  gu -      u    gu    g    g  a  -----   u 
 ug  u ccagag cggg  uuug gggc ag ug     agc u
 ||  | |||||| ||||  |||| |||| || ||     |||  
 ac  g gguUUU GCCC  AAAC CCCG UC Ac     uug a
-  ug u      C    UG    A    G  A  cuauu   u 


mirna_id: gga-mir-202
hairpin:
--g   -        u           -A   A       g   gu 
   cuc guuguucc uUUUCCUAUGC  UAU CUUCUUU aga  u
   ||| |||||||| |||||||||||  ||| ||||||| |||   
   gag cagcgggg AAAAGGGUACG  AUA GGAGAaa ucu  u
aug   u        u           AG   C       -   ag 


mirna_id: gga-mir-302b
hairpin:
cc        UU          UG   U  gugau 
  cuuuuACU  AACAUGGAGG  CUU CU     u
  ||||||||  ||||||||||  ||| ||     u
  ggaGAUGA  UUGUACCUUC  GAA ga     u
-u        UU          GU   U  aaaca 


mirna_id: gga-mir-302c
hairpin:
  u     UU             C    Gcc 
cc ccgcU  AACAUGGAGGUAC UGCU   u
|| |||||  ||||||||||||| ||||   a
gg GGUGA  UUGUACCUUCGUG AUga   c
  u     CU             A    aaa 


mirna_id: gga-mir-302d
hairpin:
  u     uu                  ggaca 
cc caacu  aacauggagguacuugcu     c
|| |||||  ||||||||||||||||||     c
gg GUUGA  UUGUACCUUCGUGAAUga     u
  u     UU                  aaaag 


mirna_id: gga-mir-365-1
hairpin:
c      aa        ac           ----   -    uu 
 gcaggg  aaugaggg  uuuugggggca    gau gugu  c
 ||||||  ||||||||  |||||||||||    ||| ||||  c
 cguucu  uUAUUCCU  AAAAUCCCCGU    cua caca  a
a      cg        -A           AAUa   u    uu 


mirna_id: gga-mir-365-2
hairpin:
--   ---a       a        ac   c       -----    u   u 
  ggc    gcaagaa aaugaggg  uuu aggggca     gcug guu u
  |||    ||||||| ||||||||  ||| |||||||     |||| ||| a
  cug    cguucuu uUAUUCCU  AAA UCCCCGU     ugac caa c
aa   guaa       g        AA   -       AAUac    c   u 


mirna_id: gga-mir-375
hairpin:
-       u      cc   u       c ga 
 ccuggcg cgagcc  acg gcaagac u  c
 ||||||| ||||||  ||| ||||||| |  c
 ggAUUGC GCUCGG  UGC UGUUUug a  u
c       -      CU   U       c ag 


mirna_id: gga-mir-383
hairpin:
   -c  A      AA    A        -  g   a 
cuc  uc GAUCAG  GGUG UUGUGGCU uu ggu a
|||  || ||||||  |||| |||||||| || |||  
gag  ag cugguc  ucac gacaccga ga uua a
   aa  a      cg    -        c  g   u 


mirna_id: gga-mir-455
hairpin:
u  c   u ug  g          U      A   C   gaa 
 cc ugg g  ag gUAUGUGCCC UGGACU CAU Gug   g
 || ||| |  || |||||||||| |||||| ||| |||    
 gg acu c  uC CAUAUACGGG ACCUGA GUa cac   c
u  a   c gu  A          U      C   c   gac 


mirna_id: gga-mir-489
hairpin:
 ug ug c    ug             c      ua     a 
g  g  g uugg  gucguauguauga gucauu  cuugg c
|  |  | ||||  ||||||||||||| ||||||  |||||  
c  c  c aauC  CGGCAUGUAUACU CAGUGA  ggauu u
 gu gu a    GU             A      --     u 


mirna_id: gga-mir-490
hairpin:
aa  uc           c      --         g   caag   a 
  gu  augguucgaca caugga  ucuccaggu ggu    auu u
  ||  ||||||||||| ||||||  ||||||||| |||    ||| a
  ca  ugucgaguuGU GUACCU  GGAGGUCCA Cca    uag g
aa  cu           C      CA         A   --ca   a 


mirna_id: gga-mir-499
hairpin:
uu     -   c  c   UA       U           Ga   u 
  ugagg gag gg agU  AGACUUG AGUGAUGUUUA  uaa g
  ||||| ||| || |||  ||||||| |||||||||||  |||  
  acucc cuc uc ucg  ucugaau ucacuacaagu  auu u
uu     u   u  a   ug       u           ac   a 


mirna_id: gga-mir-211
hairpin:
      a         UG  A     U    --ga    
ccugug gcUUCCCUU  UC UCCUA GCCU    gcg 
|||||| |||||||||  || ||||| ||||    || a
gggcac cggagggaa  gg agggu cgga    cgu 
      c         gu  c     -    gguc    


mirna_id: gga-mir-367
hairpin:
agg   a            ca     c    uugua 
   cua uacuguugcuaa  ugcaa ucug     u
   ||| ||||||||||||  ||||| ||||      
   ggu GUGGUAACGAUU  ACGUU Aggu     a
-ca   a            UC     A    uaaaa 


mirna_id: gga-mir-466
hairpin:
a     c  a    aca                u 
 guuuu ug gugu   uauauguauguaugua a
 ||||| || ||||   ||||||||||||||||  
 CAGAA AC CACA   AUAUAUAuauauauau u
-     U  A    CAC                a 


mirna_id: gga-mir-429
hairpin:
g  -   u     - u  c          aa       cu  cu 
 cc ugc gauug c gu uuaccaggca  guuagau  ag  a
 || ||| ||||| | || ||||||||||  |||||||  ||   
 gg acg cuaac G CG AAUGGUCUGU  UAAUcug  uc  u
-  u   -     U C  U          CA       --  uu 


mirna_id: gga-mir-449a
hairpin:
c      c  ug  g      -  UA         --  ug a 
 ugugug gg  gg UGGCAG UG  UGUUAGCUG  GU  a a
 |||||| ||  || |||||| ||  |||||||||  ||  | c
 auacac uc  cc aucguu ac  acaaucgac  ca  u u
c      c  gu  a      g  gc         ua  gu c 


mirna_id: mmu-mir-302b
hairpin:
guucc    a   UU         AU    UCUgu   au 
     cuuc ACU  AACAUGGGA  GCUU     cuc  c
     |||| |||  |||||||||  ||||     |||   
     gaaG UGA  UUGUACCUU  UGAA     gag  g
----u    A   UU         CG    ----U   aa 


mirna_id: mmu-mir-302c
hairpin:
    uG  UU         U   C    -g  u 
ccuc  CU  AACAUGGGG UAC UGCu  ug u
||||  ||  ||||||||| ||| ||||  || a
gggG  GA  UUGUACCUU GUG Acga  ac a
    GU  CU         C   A    aa  a 


mirna_id: mmu-mir-302d
hairpin:
  uu     U                CUg gca 
cc  uACUU AACAUGGAGGCACUUG   u   u
||  ||||| ||||||||||||||||   |    
gg  GUGAG UUGUACCUUCGUGAAU   a   u
  -U     U                -aa aau 


mirna_id: rno-mir-378a
hairpin:
-  g  C              UGU      ccu 
 gg CU CUGACUCCAGGUCC   GUguua   c
 || || ||||||||||||||   ||||||    
 cc GA GACUGAGGUUCAGG   CAcgau   g
u  G  A              --U      aaa 


mirna_id: rno-mir-505
hairpin:
  u           G    A        -u  g 
ag ggGGGAGCCAG AAGU UUGAUGUU  cu c
|| ||||||||||| |||| ||||||||  ||  
uc cuCCUUUGGUC UUCA AACUGcga  gg c
  u           G    C        uu  a 


mirna_id: rno-mir-499
hairpin:
  u  UA        A          g uccu 
gc gU  AGACUUGC GUGAUGUUUa c    c
|| ||  |||||||| |||||||||| |     
cg CG  UCUGAACG CACUACAAgu g    u
  U  UG        A          - uacc 


mirna_id: rno-mir-664-1
hairpin:
CU         AAAA  U         aa 
  GGCUGGGGA    GA UGGauagaa  c
  |||||||||    || |||||||||  a
  CCGACCCCU    UU ACUUAUcuu  u
AU         --CA  U         au 


mirna_id: rno-mir-664-2
hairpin:
CU         AAA   U         aa 
  GGCUGGGGA   UGA UGGauagaa  c
  |||||||||   ||| |||||||||  a
  CCGACCCCU   AUU ACUUAUcuu  u
AU         --C   U         au 


mirna_id: rno-mir-497
hairpin:
-------cC    G    C         U  --   ac 
         AGCA CACA UGUGGUUUG Ac  ggc  u
         |||| |||| ||||||||| ||  |||   
         UUGU GUGU ACACCAAAC ug  ccg  g
ggagcgAGA    G    C         C  ca   gu 


mirna_id: ebv-mir-BART3
hairpin:
         ga    A   -      U       uaaau 
ccuuuggug  ACCU GUG UUAGUG UGUGCUg     a
|||||||||  |||| ||| |||||| |||||||      
ggaggccac  UGGA CAC GAUCAC ACGCgac     a
         UG    C   U      C       cugug 


mirna_id: ebv-mir-BART4
hairpin:
u       G     A   -   -         --   aa 
 uuggugg ACCUG UGC UGC UGGUGUGCU  gua  u
 ||||||| ||||| ||| ||| |||||||||  |||   
 gaccacU UGGAC ACG AUG ACUACACga  cgu  a
g       G     C   G   C         uc   ga 


mirna_id: ebv-mir-BART5
hairpin:
  uc    g   cuCA      AU     U        ac  a  g 
gc  ugug cac    AGGUGA  AUAGC GCCCAUCG  gu uc c
||  |||| |||    ||||||  ||||| ||||||||  || ||  
ug  acgc gug    UCCACU  UGUCG CGGGUGgc  ca ag u
  ga    a   -aaa      --     C        --  a  g 


mirna_id: ebv-mir-BART6
hairpin:
u a     uugg                 A    AUA  c     u 
 g ccuug    uacuuUAAGGUUGGUCC AUCC   GG uuuuu u
 | |||||    ||||||||||||||||| ||||   || |||||  
 c ggaac    augAGAUUCCGAUCAGG UAGG   Cc aaaag g
a c     -uca                 C    -GG  c     u 


mirna_id: ebv-mir-BART7
hairpin:
   -    uc   a        -  U        AA  a  cu 
ucc agug  cug uCCUGGAC CU GACUAUGA  CA uu  a
||| ||||  ||| |||||||| || ||||||||  || ||   
agg ucac  gac GGGACCUG GA CUGAUACU  gu aa  a
   c    gu   a        U  C        AC  a  aa 


mirna_id: ebv-mir-BART8
hairpin:
     u     a      UU  C        -    auga 
ugggu cacug uUACGG  UC UAGAUUGU ACAG    a
||||| ||||| ||||||  || |||||||| ||||    c
auucg gugac GAUGCU  GG AUCUAACA UGuc    u
     u     A      GG  U        C    aaga 


mirna_id: ebv-mir-BART9
hairpin:
    --u      ug   U      -    U  GAA    uaac 
cagc   guuguu  UAC GGACCC UGAA UG   ACag    u
||||   ||||||  ||| |||||| |||| ||   ||||    u
gucg   caacag  AUG CCUGGG ACUU AC   Uguc    g
    uau      UG   C      U    C  -AA    uuag 


mirna_id: ebv-mir-BART10
hairpin:
    -      uc   g     C    U     C      uauu 
caga ggagug  ccg gGCCA CUCU UGGUU UGUACA    u
|||| ||||||  ||| ||||| |||| ||||| ||||||    u
gucu ccucac  ggU UCGGU GAGG ACCAA ACAUgu    g
    a      gu   G     U    U     U      uauu 


mirna_id: ebv-mir-BART11
hairpin:
    --u        U   A          C  UA     g     
ggcu   cuguuggg CAG CAGUUUGGUG GC  GUUGu ugcu 
||||   |||||||| ||| |||||||||| ||  ||||| ||| u
ccgg   gacgauuC GUC GUCGGACCAC CG  CAacg acga 
    ugu        C   A          A  --     -     


mirna_id: ebv-mir-BART12
hairpin:
   -   a     c   -    cau      c      auu 
cug gug ccuaa acc cgcc   caccac ggacag   c
||| ||| ||||| ||| ||||   |||||| ||||||   u
gac cau ggguu UGG GUGG   GUGGUG CCUguu   g
   g   g     U   U    UUU      U      caa 


mirna_id: ebv-mir-BART13
hairpin:
u       c   a  A   G   G    -UCG      - g u 
 ugggcac ucg uA CCG CUC UGGC    UACAGa c a u
 ||||||| ||| || ||| ||| ||||    |||||| | | g
 auuugug agc GU GGC GGG ACCG    AUGUcu g u u
g       u   A  C   A   -    UUCA      c g u 


mirna_id: ebv-mir-BART14
hairpin:
    -g   - -    UA      -     C -       uaau 
cagg  gug g ccgg  CCCUAC GCUGC G AUUUACA    a
||||  ||| | ||||  |||||| ||||| | |||||||     
gucc  cgc c gguc  GGGAUG UGACG C UAAAUgu    u
    ag   g a    UA      A     U G       uaaa 


mirna_id: rlcv-mir-rL1-1
hairpin:
    gg  c   a       GA    C          cc   c 
ggcc  cu cuu uUAACCU  UCAG CCCGGGGUUg  ugu u
||||  || ||| |||||||  |||| ||||||||||  |||  
cugg  ga gaa AGUUGGA  AGUC GGGCCUCaau  acg u
    --  a   C       GA    C          -c   a 


mirna_id: rlcv-mir-rL1-2
hairpin:
   cc     uu       G  A           ugau 
gcc  cacuu  AAAUUCU CC CAGAAGAUAGC    a
|||  |||||  ||||||| || |||||||||||    c
cgg  gugaA  UUUAAGG GG GUUUUCUAUug    u
   uu     CC       G  C           uagc 


mirna_id: rlcv-mir-rL1-3
hairpin:
--cugg  c     g             c   -     ---   g u 
      gu cucgg gggcgguggagac gcg ggugc   ggu a u
      || ||||| ||||||||||||| ||| |||||   ||| | g
      ca gggcc cUCGUCAUCUCUG CGC CCACG   cca u c
ggucug  u     g             C   U     CUc   g u 


mirna_id: rlcv-mir-rL1-4
hairpin:
   au  uuuaac  ug  -          -A      C      gugag 
gag  gc      cu  gg gggACCUAGU  AUUGUG GGUGUU     u
|||  ||      ||  || ||||||||||  |||||| ||||||      
cuc  cg      gg  cc cUCUGGAUCA  UAGCAC CCACaa     g
   --  uuccuc  gu  a          CC      A      agauu 


mirna_id: rlcv-mir-rL1-5
hairpin:
        gA        -CC    A      -  g a 
cuucggug  ACCUAGUG   GGUG UGUGCU gu g u
||||||||  ||||||||   |||| |||||| || | a
ggggccac  UGGAUCAC   UCAC ACGCga cg c g
        UG        UUU    C      u  a g 


mirna_id: rlcv-mir-rL1-6
hairpin:
c          UUU       -    AC        auua 
 ccuugguggg   UAGUGGA AGUG  GUGCUGUg    g
 ||||||||||   ||||||| ||||  ||||||||     
 gggaccacuC   AUCACCU UCGC  CACGAUac    g
-          UGU       A    --        ccau 


mirna_id: rlcv-mir-rL1-7
hairpin:
       c g  uC    U     UC          ag   cu 
ccgugug c cu  GAGG AAACA  GGCUUACUga  ucu  u
||||||| | ||  |||| |||||  ||||||||||  |||  a
gguacac g gA  CUCC UUUGU  CCGGGUGAcu  gga  g
       a a  CA    C     --          --   au 


mirna_id: rlcv-mir-rL1-8
hairpin:
 ug     g   c   A       AUA  U        aug   g 
u  cugcg cac gUA GGUGAAU   GC GCCCAUUG   ucu u
|  ||||| ||| ||| |||||||   || ||||||||   |||  
a  gacgc gug CAU CCACUUG   CG CGGGUGGc   aga u
 gu     a   A   -       --A  C        cca   u 


mirna_id: rlcv-mir-rL1-9
hairpin:
        aa  -     a        -    -  cc a    au 
gccugcgg  cc cuaag ggggggcc ugca cg  g gguu  u
||||||||  || ||||| |||||||| |||| ||  | ||||  u
cggacguc  gg GAUUC CCCCCUGG ACGU GC  c ccga  c
        -a  U     -        U    A  Uu -    cc 


mirna_id: rlcv-mir-rL1-10
hairpin:
   - u  u   ac        U   C      U   uaaug 
gug g cc cug  AUCGGGUU CCG UGUACU GCA     a
||| | || |||  |||||||| ||| |||||| |||      
cac c gg gac  UAGUCCAG GGC GCGUGA Ugu     g
   u u  c   GA        U   C      -   uucaa 


mirna_id: rlcv-mir-rL1-11
hairpin:
-  g     -                A     G   uggc 
 gg gccuu gccuCCGUAUCCUAUC AGUGU ACG    u
 || ||||| |||||||||||||||| ||||| |||     
 cc cggaa ugGGGGCAUAGGAUAG UCACA Ugc    u
u  g     a                C     G   uugu 


mirna_id: rlcv-mir-rL1-12
hairpin:
u     u      -  A    A        A  --       ua 
 caggg acgcuc AG CCAG CCAUGCAC GU  GGGcgau  a
 ||||| |||||| || |||| |||||||| ||  |||||||   
 guccu ugugAG UC GGUC GGUACGUG CA  cucguua  g
g     -      A  -    A        G  Au       ca 


mirna_id: rlcv-mir-rL1-13
hairpin:
    -   c   a          G        AA     c 
cccg ugu uug uCCUGGGCAU GGCUAUGA  caguu u
|||| ||| ||| |||||||||| ||||||||  ||||| a
gggc acg ggc GGGACCUGUG CCGAUACU  guuaa a
    c   u   A          A        AG     c 


mirna_id: rlcv-mir-rL1-14-1
hairpin:
   -    gg        GA          C  UU    u  uu 
gcc cucc  cugggUCG  CGGUCUGGUG GC  GAUg gu  u
||| ||||  ||||||||  |||||||||| ||  |||| ||  c
cgg gagg  gacuCAGC  GUCGGACUAC CG  CUac ca  g
   u    -a        AA          A  --    -  ug 


mirna_id: rlcv-mir-rL1-15
hairpin:
uuccuggag   -   ac        -     -UU   G        gg    
         ccg gug  cugagACC CACCC   CUC ACGGGGCA  ugu 
         ||| |||  |||||||| |||||   ||| ||||||||  || u
         ggc cac  gauUUUGG GUGGG   GAG UGUCCUgu  aua 
------gag   g   gu        U     UAU   A        ga    


mirna_id: rlcv-mir-rL1-16
hairpin:
    -      u A       -    -C     U  ugauu 
gagg gccagu g AGCAGGC AUGU  UUCAU CC     u
|||| |||||| | ||||||| ||||  ||||| ||      
uucc cgguua C UUGUCCG UACA  AAGUA gg     c
    a      u C       G    CA     C  uaguc 


mirna_id: hsa-mir-758
hairpin:
-gcc       a    --A    U      AGA   C   - uuu 
    uggauac ugaG   UGGU GACCAG   GCA ACg c   a
    ||||||| ||||   |||| ||||||   ||| ||| |   u
    aucuaug acuc   AUCA CUGGUC   UGU Ugc g   u
cgua       -    CCA    C      CAG   U   c ugu 


mirna_id: hsa-mir-1264
hairpin:
--------    c     -    u        aaagaa 
        aggu cucaa uaag auuuguug      u
        |||| ||||| |||| ||||||||      a
        UCCA GAGUU AUUC UGAACaac      a
guguaUUG    C     U    -        caaaua 


mirna_id: hsa-mir-671
hairpin:
   ggu aa     ----a    a        A   A      GA           -u   g 
gca   g  cuggc     ggcc ggaagagg GGA GCCCUG  GGGGCUGGAGg  gau g
|||   |  |||||     |||| |||||||| ||| ||||||  |||||||||||  |||  
cgu   c  gaccg     ccgg cuuucuCC CCU CGGGAC  UCUUGGCCUcc  uug a
   ggu gg     agaug    g        A   -      --           uu   u 


mirna_id: hsa-mir-668
hairpin:
    a   c   ---        g         a 
ggua gug gcc   ucggguga caugcacuu a
|||| ||| |||   |||||||| ||||||||| u
cCAU CAC CGG   GGCUCACU GUauguggg g
    -   C   CUC        -         u 


mirna_id: hsa-mir-550a-3
hairpin:
  u    u c   cu   gcA                  Guc     gu 
ga gcuu g ugg  ggu   GUGCCUGAGGGAGUAAGA   cuguu  u
|| |||| | |||  |||   ||||||||||||||||||   |||||  g
cu ugaa c acc  cUA   CACGGACUCCCUCAUUCU   gauag  u
  c    - a   -u   ---                  -GU     aa 


mirna_id: hsa-mir-767
hairpin:
  -uuuu   u  u             U C       UU  C      U    c 
gc     aua ug agguuuuugcuca G ACCAUGG  GU UGAGCA Gcag a
||     ||| || ||||||||||||| | |||||||  || |||||| |||| u
cg     ugu ac uccaaggacgagU U UGGUACC  CA ACUCGU Uguu g
  ucauc   u  u             C U       -C  U      C    c 


mirna_id: hsa-mir-1224
hairpin:
G      CUC         a   u  u  cgccggggccgg 
 UGAGGA   GGGAGGUGG ggg gg gc            g
 ||||||   ||||||||| ||| || ||            c
 ACUCCU   UCCUCCACC Ccc cu cg            g
G      CUC         C   u  u  cucgacuuuguc 


mirna_id: hsa-mir-151b
hairpin:
ac     -aug   ca    -cu  uca       -    aca   aaac 
  cucug    ugu  gucu   cu   gggcucc cgag   cag    a
  |||||    |||  ||||   ||   ||||||| ||||   |||     
  gggac    aca  caga   GA   CUCGAGG GCUc   guc    g
-u     ccaa   aa    UCU  -CA       A    -cc   caca 


mirna_id: hsa-mir-320b-1
hairpin:
---------------------------------aauuaauc    ucu      uu 
                                         ccuc   uucuag  c
                                         ||||   ||||||   
                                         ggag   gagauc  u
uuaauuaaucaauuaaacaAACGGGAGAGUUGGGUCGAAAA    --u      cu 


mirna_id: hsa-mir-320c-1
hairpin:
u        --aaaaugag        uu       c    cag 
 uugcauua          gccuucuc  cccaguu uucc   a
 ||||||||          ||||||||  ||||||| ||||    
 gauguagu          UGGGAGAG  GGGUCGA AAgg   g
g        aaaaaaaaga        UU       A    acu 


mirna_id: hsa-mir-1296
hairpin:
---a       aacu         C CU        CU   u     a 
    ccuaccu    gggUUAGGG C  GGCUCCAU  CCu uagga a
    |||||||    ||||||||| |  ||||||||  ||| ||||| a
    gggugga    cccaauccc g  ucggggug  ggg gucuu c
uguc       ----         a cu        ag   u     c 


mirna_id: hsa-mir-1468
hairpin:
     gu gu  C         C     C     -u   cau 
ggugg  g  uu UCCGUUUGC UGUUU GCUGa  gug   u
|||||  |  || ||||||||| ||||| |||||  |||   c
cuacc  c  aa agguaaacg auaaa cgacu  uac   a
     ug uu  a         a     a     cu   uca 


mirna_id: hsa-mir-1323
hairpin:
ac   g             A  G         gugg 
  uga guccUCAAAACUG GG GCAUUUUCU    u
  ||| ||||||||||||| || |||||||||    u
  acu uagggguuuugac cc cgugaaagg    u
-a   g             -  a         aaag 


mirna_id: hsa-mir-1271
hairpin:
-ca  -   au             C     A           a 
   cc cag  cagugCUUGGCAC UAGCA GCACUCAguaa u
   || |||  ||||||||||||| ||||| |||||||||||  
   gg guc  guuACGGACCGUG AUCGU CGUGAguuguu a
ucg  a   gu             U     C           u 


mirna_id: hsa-mir-1301
hairpin:
--        g           -     - c      -  gu 
  ggauugug ggggucgcucu aggca c gcagca cu  g
  |||||||| ||||||||||| ||||| | |||||| ||  c
  ccugacac CUUCAGUGAGG UCCGU G CGUUgu gg  u
cu        a           G     C A      a  gg 


mirna_id: hsa-mir-454
hairpin:
u       ----  --a     uc            ---         ----   --U     g 
 cuguuua    uc   ccaga  cuagaACCCUAU   CAAUAUUGU    CUC   GCugu u
 |||||||    ||   |||||  ||||||||||||   |||||||||    |||   |||||  
 gacgggu    ag   gguuu  gguuuUGGGAUA   GUUAUAACG    gag   ugaua a
g       aaca  aaa     gu            UUC         UGAU   ucu     a 


mirna_id: hsa-mir-1185-2
hairpin:
u       u    -     GA A              a  uga 
 uugguac uaaa gAGAG  U CCCUUUGUAUGUUc cu   u
 ||||||| |||| |||||  | |||||||||||||| ||    
 aacuaug guuU CUCUC  A GGGGGACAUAUAag gg   u
a       c    A     AG -              c  uaa 


mirna_id: hsa-mir-449c
hairpin:
   --g       u   gU   C      UU               u 
gcu   ggaugug cag  AGG AGUGUA  GCUAGCGGCUGUuaa g
|||   ||||||| |||  ||| ||||||  ||||||||||||||| a
cga   cuuacgu GUC  UCC UCACGU  UGAUCGUUgacaauu u
   aga       U   UC   -      --               u 


mirna_id: hsa-mir-1283-1
hairpin:
--       ua   g   AC     A           g  g c 
  cucaagc  uga UCU  AAAGG AAGCGCUUUCU uu u a
  |||||||  ||| |||  ||||| ||||||||||| || | g
  gaguuug  auu gga  uuucc uucgcgaaaga aa a a
aa       gc   g   gu     c           g  g a 


mirna_id: hsa-mir-769
hairpin:
gc     u   --  uu   g        c UG       U   U   G    g   ugu 
  cuugg gcu  ga  ccu ggcucuga c  AGACCUC GGG UCU AGCU uga   u
  ||||| |||  ||  ||| |||||||| |  ||||||| ||| ||| |||| |||    
  gaacc ugg  cu  ggg ccgggacU G  UCUGGGG CUC AGG UCga gcu   g
-c     u   gu  cc   g        U GU       C   U   G    -   cuc 


mirna_id: hsa-mir-766
hairpin:
  a    cag   -cug    u       AG    AAU   U     UCUU   uuu 
gc uccu   gac    ggcu ggguggu  GAGG   UGG GCUGG    uca   u
|| ||||   |||    |||| |||||||  ||||   ||| |||||    |||   g
cg agga   cug    ccga cccacCG  CUCC   ACC CGACC    Agu   g
  -    -ua   uuaa    c       -A    GAC   C     --UC   uua 


mirna_id: hsa-mir-320b-2
hairpin:
--uguuauuuuuugucuucuaccua        ------g  u   ag        uu     -a       a 
                         agaauucu       uc cuu  gcuuucuc  cccag  uuuccca a
                         ||||||||       || |||  ||||||||  |||||  |||||||  
                         ucuuaaga       ag gaa  CGGGAGAG  GGGUC  AAAgggu g
aagggauagauuaauacagucucug        aaaaaaa  -   AA        UU     GA       u 


mirna_id: hsa-mir-378d-2
hairpin:
   ug   a  a    -    cACU           -CA   -A    uc 
gaa  guu ca ggag agaa    GGACUUGGAGU   GAA  acuu  a
|||  ||| || |||| ||||    |||||||||||   |||  ||||   
uuu  uag gu ccuu ucuu    ccugaaucucg   cuu  ugaa  u
   gu   a  a    g    -uac           ucc   ac    cc 


mirna_id: hsa-mir-1185-1
hairpin:
u       u    -     GA A              a  uga 
 uugguac ugaa gAGAG  U CCCUUUGUAUGUUc cu   u
 ||||||| |||| |||||  | |||||||||||||| ||    
 aacuaug guuU UUCUC  A GGGGGACAUAUAag gg   u
a       c    A     AG -              c  uaa 


mirna_id: hsa-mir-762
hairpin:
     g   c    u        --  -a      g        
ggccc gcu cggg cucggccc  gu  cagucc gccggcc 
||||| ||| |||| ||||||||  ||  |||||| |||||| a
ccggg cgg gccC GAGCCGGG  CG  GUCGGG cggucgu 
     g   c    -        GC  GG      G        


mirna_id: hsa-mir-802
hairpin:
---guu      u     g C   A          A       -  cc 
      cuguua uugca u AGU ACAAAGAUUC UCCUUGU gu  a
      |||||| ||||| | ||| |||||||||| ||||||| ||  u
      gauaau aaugu a uca uguuucuaag aggaaca cg  c
cagguc      u     g u   c          -       a  ua 


mirna_id: hsa-mir-670
hairpin:
  uu     ug ac      UC        U     - UG    ug au 
gu  agggg  g  cugauG  CCUGAGUG AUGUG G  aacc  a  u
||  |||||  |  ||||||  |||||||| ||||| |  ||||  |  u
ca  ucccc  u  gacugu  ggacuuac uauac c  uugg  u  g
  cu     gu --      ga        u     u cu    gu cc 


mirna_id: hsa-mir-1298
hairpin:
----agac       u         U    C             ------       ccc 
        gaggagu aagagUUCA UCGG UGUCCAGAUGUAu      ccaagua   u
        ||||||| ||||||||| |||| |||||||||||||      |||||||    
        cuuuuca uuuucaagu aguc acgggucuacaua      gguuuau   g
acucagua       c         c    a             aauaac       ugu 


mirna_id: hsa-mir-2113
hairpin:
u        caa           ua    g        cg   a 
 uuucaaag   ugugugacagg  cagg acaaaucc  uua u
 ||||||||   |||||||||||  |||| ||||||||  ||| a
 aaaguuuc   guaCACUGUCU  GUUC UGUUUAgg  aau a
a        acc           CG    G        ag   g 


mirna_id: hsa-mir-761
hairpin:
                      G  A  g 
ggaggaGCAGCAGGGUGAAACU AC CA u
|||||||||||||||||||||| || ||  
ccuccucgucguuucacuuuga ug gu u
                      g  -  c 


mirna_id: hsa-mir-764
hairpin:
    ua  ag    G   U    -  U        a   -  g 
aauc  gg  GCAG UGC CACU UG CCUCCUcc ugc uu g
||||  ||  |||| ||| |||| || |||||||| ||| ||  
uuag  cc  uguc acg guga ac ggaggagg acg aa a
    ua  au    a   -    u  c        g   u  a 


mirna_id: hsa-mir-759
hairpin:
              cc     u   AG          A   U  Cu 
uaauaaauuaaaug  uaaac gGC  AGUGCAAACA UUU GA  c
||||||||||||||  ||||| |||  |||||||||| ||| ||   
auuguuuaauuuac  auuug ucg  ucacguuugu aaa cu  a
              aa     -   -g          -   u  ag 


mirna_id: mmu-mir-1224
hairpin:
G      CU          ------    u   aucau      c 
 UGAGGA  GGGGAGGUGG      AGgg agc     uagagc a
 ||||||  ||||||||||      |||| |||     ||||||  
 ACUCCU  CUUCUCCACC      uccc ucg     gucucg g
G      CU          CCccuc    -   acucu      a 


mirna_id: mmu-mir-1247
hairpin:
cggccgc       A  C   C  UU   C     Acguu  u 
       cgggcgc CC GUC CG  CGU CCCGG     gc c
       ||||||| || ||| ||  ||| |||||     || u
       gcccgCG GG CAG GC  GCA GGGCc     cg c
--gucaa       A  U   A  -U   A     ----c  u 


mirna_id: mmu-mir-301b
hairpin:
u   -cu     c g        C    UAGGUUGC    C  ug    g 
 uuc   gcugg u cggguGCU UGAC        ACUA Ug  cugu a
 |||   ||||| | |||||||| ||||        |||| ||  |||| g
 aag   cgacc g gucuaCGA ACUG        UGGU AC  GACg a
g   cuc     a g        A    -----UUA    A  GU    a 


mirna_id: mmu-mir-675
hairpin:
u  --              U    AA     CC      gac 
 gc  ggcccagggacUGG GCGG  AGGGC  ACAGUg   u
 ||  |||||||||||||| ||||  |||||  ||||||   u
 cg  cugggucccUGACU CGCC  UCCCG  UGUCac   g
a  gu              -    AA     UA      aug 


mirna_id: mmu-mir-744
hairpin:
       c     GC    C   -   U       gucuuacugacgguu 
ggcuggg aaggU  GGGG UAG GGC AACAGCA               u
||||||| |||||  |||| ||| ||| |||||||               c
cuggcuc uUCCA  CUCC AUC CCG UUGUCgu               c
       a     -A    A   A   -       acacacaccaaaggu 


mirna_id: mmu-mir-374b
hairpin:
gaa  aau  ---ua      ug AU                     u 
   ga   cc     cucggg  g  AUAAUACAACCUGCUAAGUGu c
   ||   ||     ||||||  |  |||||||||||||||||||||  
   cu   gg     GAGCCU  U  UAUUAUGUUGGacgauucacg u
cug  cuc  uauug      GU AC                     a 


mirna_id: mmu-mir-216b
hairpin:
u  g        gA            C  A    --Aug  ac 
 ug cagacugg  AAUCUCUGCAGG AA UGUG     uc  u
 || ||||||||  |||||||||||| || ||||     ||   
 ac gucugacU  UUAGAGAUGUCC UU ACAc     ag  g
a  a        UC            A  C    accaa  aa 


mirna_id: mmu-mir-592
hairpin:
u   --a     c     cA        A    C        gu    a 
 gau   uuaug cauga  UUGUGUCA UAUG GAUGAUGU  ugug u
 |||   ||||| |||||  |||||||| |||| ||||||||  ||||  
 cua   aaugc guacU  AACGCAGU GUGC CUACUgcg  acac g
a   cag     a     AC        G    A        --    g 


mirna_id: mmu-mir-758
hairpin:
       g     --    U      AGA   C   c   a 
ugggugc ugagg  UGGU GACCAG   GCA ACG uau u
||||||| |||||  |||| ||||||   ||| ||| |||  
aucuaug acucc  AUCA CUGGUC   UGU Ugc gug u
       -     ca    C      CAG   U   c   u 


mirna_id: mmu-mir-1264
hairpin:
   gg            C     -    U        aaaaaa 
ccu  cauauagcAGGU CUCAA UAAG AUUUGUUg      u
|||  |||||||||||| ||||| |||| ||||||||      a
gga  guguauUGUCCA GAGUU AUUC UAAACaac      a
   -g            C     U    -        gaagua 


mirna_id: mmu-mir-551b
hairpin:
    ------     ug   ca          CU     - -AGA    gug 
gugc      ucuug  gcc  uGAAAUCAAG  UGGGU G    CCUg   c
||||      |||||  |||  ||||||||||  ||||| |    ||||    
uacg      agaac  cgg  ACUUUGGUUC  ACCCA C    ggac   a
    ucagua     gu   uG          AU     G Ggaa    aag 


mirna_id: mmu-mir-1249
hairpin:
   -uucuu      gu  -         A     U    CAA     cua 
cga      guuugc  gg ggAGGAGGG GGGGA GGGC   GUUCc   u
|||      ||||||  || ||||||||| ||||| ||||   |||||    
gcu      caagcg  cc CUUCUUCCC CCCCU CCCG   CAagg   g
   cauccu      gu  A         -     U    ---     ucc 


mirna_id: mmu-mir-671
hairpin:
u   ----a   ca        A   A      GA           -u   g 
 ggc     ggc  ggaagagg GGA GCCCUG  GGGGCUGGAGg  gau g
 |||     |||  |||||||| ||| ||||||  |||||||||||  |||  
 ccg     ccg  cuuucuCC CCU CGGGAC  UCUUGGCCUcc  uug a
a   agaug   ag        A   -      --           uu   u 


mirna_id: mmu-mir-668
hairpin:
    A   U   ---        G            
gGUA GUG GCC   UCGGGUGA CAUGcacuuaa 
|||| ||| |||   |||||||| |||||||||| u
CCAU CAC CGG   GGCUCACU GUauguggaug 
    -   C   CUC        -            


mirna_id: mmu-mir-1843a
hairpin:
-gaa         -CU U   U       aau 
    UAUGGAGGU   C GUC GACUuag   a
    |||||||||   | ||| |||||||   g
    AUACCUCCA   G UAG CUgaguc   c
caAC         CUU C   U       ggu 


mirna_id: mmu-mir-665
hairpin:
--agaaca     u   -           U      AUCCA  A     u 
        ggguc ccu ugAGGGGCCUC GCCUCU     GG UUaug u
        ||||| ||| ||||||||||| ||||||     || |||||  
        uccgg gga auUCCCUGGAG CGGAGG     CC Aguau u
ucucauuc     c   c           U      ----A  -     u 


mirna_id: mmu-mir-667
hairpin:
      --acu     C  U     U GA    -  AG    ccauac 
gugggu     ggccu GG GCUGG G  GCAG UG  CACG      a
||||||     ||||| || ||||| |  |||| ||  ||||       
cacccg     ccgGA CC CGACC C  CGUC AC  GUgu      u
      gaucc     A  -     - AC    C  -A    cuauau 


mirna_id: mmu-mir-770
hairpin:
    ----c        c       A      GUCU  G       a    
gcca     cuucugug ccccAGC CCACGU    GG CCACGug gca 
||||     |||||||| ||||||| ||||||    || ||||||| || a
cggu     ggggacgc ggGGUCG GGUGCA    CC GGUGCac cgc 
    agucu        c       A      --GU  G       -    


mirna_id: mmu-mir-762
hairpin:
   -   -   cgg          gca      g        
gcc cgg cuc   gucucggccc   cggucc gccggcc 
||| ||| |||   ||||||||||   |||||| |||||| a
cgg gcc GAG   CAGGGCCGGG   GUCGGG cggucgu 
   u   C   --A          ---      G        


mirna_id: mmu-mir-3475
hairpin:
--          acc  ca       -ucc   u 
  caaaucaugu   cc  cagaggg    aga g
  ||||||||||   ||  |||||||    |||  
  GUUUGGUACA   GG  GUCUucu    ucu g
AA          --C  AG       ugau   u 


mirna_id: mmu-mir-344d-3
hairpin:
agauu    -     A   U          C         u 
     ucau cAGUC GGC AGUGGUUAUA UCCaggacu a
     |||| ||||| ||| |||||||||| ||||||||| u
     ggua GUCAG CCG UCACCAAUAU AGguccugg c
--cgu    A     A   -          -         u 


mirna_id: mmu-mir-802
hairpin:
------  uc      u     aUC   A          A   ---      c 
      gg  cuauua uugca   AGU ACAAAGAUUC UCC   UUgugu a
      ||  |||||| |||||   ||| |||||||||| |||   |||||| a
      cc  gauaau aaugu   UCA UGUUUCUGAG AGG   aacaua u
ccacuu  --      u     GAC   C          -   CAc      c 


mirna_id: mmu-mir-672
hairpin:
    g  aucua      u g        U     U           guaua 
gaug ug     gcccuu a uuuUGAGG UGGUG ACUGUGUGUGA     c
|||| ||     |||||| | |||||||| ||||| |||||||||||     a
cuac ac     ugggag u aaAGCUUC AUCAC UGACACACAcu     u
    -  ----g      - g        U     -           auuua 


mirna_id: mmu-mir-670
hairpin:
   uu     ug gc      UC        U     - UG     gaac 
ggu  ggagg  g  cugacA  CCUGAGUG AUGUG G  AAccu    u
|||  |||||  |  ||||||  |||||||| ||||| |  |||||    u
ucg  ucucc  c  gacUGU  GGACUUAC UAUAC C  UUggg    g
   cu     gu --      GA        C     U CU     uccc 


mirna_id: mmu-mir-1298
hairpin:
       u         U    C            ------c       cc 
gaggggu aagagUUCA UCGG UGUCCAGAUGUA       ccaagua  c
||||||| ||||||||| |||| ||||||||||||       |||||||   
cucuucg uuuUCAAGU AGUC ACGGGUCUACau       gguuuau  u
       c         U    A            acauaac       ug 


mirna_id: mmu-mir-761
hairpin:
u  ca   --                      G  A  g 
 gg  agu  ggaggaGCAGCAGGGUGAAACU AC CA u
 ||  |||  |||||||||||||||||||||| || ||  
 cc  uca  ccuccucgucguuucacuuuga ug gu g
a  -c   gu                      g  -  c 


mirna_id: mmu-mir-764
hairpin:
u    ac    ug    u   a     G   U   -   U           cuua 
 caac  aauc  aauc ugg ggcaG UGC CAC AUG CCUCCUccaug    u
 ||||  ||||  |||| ||| ||||| ||| ||| ||| |||||||||||     
 guug  uuag  uuag acc cUGUC ACG GUG UAC GGAGGAgguac    a
g    cu    --    u   a     A   -   A   C           auaa 


mirna_id: mmu-mir-3059
hairpin:
-   g  a     UUU   -    GC   A     U    cu 
 ggu gu cgccc   CCU CUCU  CCC UAGGG guag  c
 ||| || |||||   ||| ||||  ||| ||||| ||||   
 ccg ca gugGG   GGA GAGA  GGG AUCUC cauc  u
u   a  a     -UU   A    -A   -     C    aa 


mirna_id: mmu-mir-3058
hairpin:
     -c  u    U  G        U  CU      uugaau   u 
uccag  gu ggag CA CCACGGCU AC  GGAAGA      guc a
|||||  || |||| || |||||||| ||  ||||||      ||| c
agguc  cg ucuC GU GGUGCCGA UG  CCUUcu      cgg u
     au  u    C  G        C  -U      ----uu   u 


mirna_id: mmu-mir-3099
hairpin:
   ga          -      C   C    CU  a   uuu 
auc  uccccaucCC AGCUUC UUC AGCC  UG ugu   a
|||  |||||||||| |||||| ||| ||||  || |||    
uag  agggguAGGG UUGGAG GAG UCGG  ac acg   g
   aa          G      A   A    AU  -   cau 


mirna_id: mmu-mir-3106
hairpin:
    a        -U       U  GAA        a ac 
aggg agcacagg  GGCUCAU UA   GCAGCCAu c  u
|||| ||||||||  ||||||| ||   |||||||| |  c
ucuc ucguguCC  UCGGGUA AU   CGUCGgug g  a
    c        UU       C  AUC        a ag 


mirna_id: mmu-mir-763
hairpin:
      gga   -gc           -    a      a CA       A AAC   U      
aaugau   ggu   aggcguuuccu gggg uuaaug C  GCUGGGA G   CAG GGCcc 
||||||   |||   ||||||||||| |||| |||||| |  ||||||| |   ||| |||| u
uugcug   ucg   ucuguaaagga ccuc aauuac g  cgacccu c   guc ucggc 
      gag   uuu           a    -      c ac       c ---   -      


mirna_id: mmu-mir-669a-1
hairpin:
u   --     a     g    GU        C     C    C   au 
 gua  ugugc ugugu uauA  UGUGUGUG AUGUU AUGU Uau  u
 |||  ||||| ||||| ||||  |||||||| ||||| |||| |||   
 cau  acacg acgca aUAU  ACACACAC UACAA UACA aua  u
a   ac     a     a    GC        A     -    u   ag 


mirna_id: mmu-mir-344d-1
hairpin:
--a      A   U C   C    CA        u 
   ucAGUC GGC G UGG UAUA  CCAggacu a
   |||||| ||| | ||| ||||  |||||||| u
   AGUCAG CCG C ACC AUAU  Gguccugg c
gaa      A   U -   A    -A        u 


mirna_id: mmu-mir-666
hairpin:
   -au  --ug    c   -        --A  -     GAG      -  ag 
cug   uc    ccug gug gAGCGGGC   CA GCUGU   AGCCcc cu  g
|||   ||    |||| ||| ||||||||   || |||||   |||||| ||   
gac   ag    ggac cgc cUCGUCCG   GU CGACG   UCGGgg ga  u
   agc  ugaa    a   a        CUA  G     ---      c  ca 


mirna_id: mmu-mir-759
hairpin:
ggauuau             cc     u   AG          A   U  Cu 
       aauaaauuaaaug  uaaac gGC  AGUGCAAACA UUU GA  c
       |||||||||||||  ||||| |||  |||||||||| ||| ||   
       uuguuuaauuuac  auuug ucg  ucacguuugu aaa cu  a
-----cc             aa     -   -g          -   u  ag 


mirna_id: mmu-mir-496a
hairpin:
     u    u        C     GU         uua 
agugu cgaa ggAGGUUG CCAUG  GUGUUCAuu   u
||||| |||| |||||||| |||||  |||||||||    
ucacg gcuu cCUCUAAC GGUAC  UAUGAGUag   u
     -    u        C     AU         uau 


mirna_id: mmu-mir-673
hairpin:
u    cc       --CU     --   U      U     uc  ga 
 ggag  ugagggg    CACAG  CUC GGUCCU GGAGc  ca  g
 ||||  |||||||    |||||  ||| |||||| |||||  ||  a
 ccuc  guucccc    GUGUC  GAG UCGGGG CCUcg  gu  a
a    cc       CCAC     UU   -      -     uu  aa 


mirna_id: mmu-mir-760
hairpin:
    ag    ccuc   gc   gc  --g    c    U      AC       C    acc 
cggg  gaug    ggu  ggg  gc   ucgc CCCC CAGGCC  CAGAGCC GGau   u
||||  ||||    |||  |||  ||   |||| |||| ||||||  ||||||| ||||   c
gccc  uugc    cca  ccc  cg   agcg GGGG GUCUGG  GUCUCGG Cuua   a
    cu    ---c   aa   aa  uaa    A    U      --       -    aag 


mirna_id: mmu-mir-674
hairpin:
   cu  u  u     u        CA             G     ag  u 
ggc  ag ca caccc gagccuuG  CUGAGAUGGGAGU GUGUA  gc c
|||  || || ||||| ||||||||  ||||||||||||| |||||  ||  
ucg  uc gu guggg cucggAAC  GACUCUACCCUCG CACgu  ug a
   ac  -  -     -        AA             A     -a  g 


mirna_id: mmu-mir-344d-2
hairpin:
agauu    -         U C   C     U        u 
     ucau uAGUCUGGU G UGG UAUAU CCAggacu a
     |||| ||||||||| | ||| ||||| |||||||| u
     ggua GUCAGACCG C ACC AUAUA Gguccugg c
--cgu    A         U -   A     -        u 


mirna_id: mmu-mir-488
hairpin:
      u    g     a  c   cu  C   U      A  C        guu 
uucggg gaga ugaga uc ucu  CC AGA AAUAGC CU UCAAacaa   u
|||||| |||| ||||| || |||  || ||| |||||| || ||||||||   c
aggucu cuuu acucu ag aga  GG UCU UUGUCG GA AGUUuguu   c
      u    a     c  a   CU  U   -      -  A        gua 


mirna_id: mmu-mir-677
hairpin:
gag   --    UG   AUUA  U    A    ----c    u 
   ccU  UCAG  AUG    GC UCUG cuuu     guuc u
   |||  ||||  |||    || |||| ||||     ||||  
   GGA  AGUC  UGC    CG AGAC GAAG     uaag c
agg   AG    CU   ----  U    C    ucguu    u 


mirna_id: mmu-mir-678
hairpin:
gugg     g    g   ag  g   u  aauau    g    cca 
    acugu acuu cag  cu ugc cc     gaga augg   u
    ||||| |||| |||  || ||| ||     |||| ||||    
    ugacg uGGA GUC  GG ACG GG     CUCU ugcc   g
----     g    G   -A  A   U  -----    G    cac 


mirna_id: mmu-mir-497
hairpin:
cc     c   c C    G    C         U  --   ac 
  ugccc cgc c AGCA CACA UGUGGUUUG Ac  ggc  u
  ||||| ||| | |||| |||| ||||||||| ||  |||   
  auggg gcg G UUGU GUGU ACACCAAAC ug  ccg  g
--     a   a A    G    C         c  ca   gu 


mirna_id: mmu-mir-423
hairpin:
acuu   a  aaauaa       u            -AG   G    A     cua 
    gug gg      aggaagu aggcUGAGGGGC   AGA CGAG CUUUu   u
    ||| ||      ||||||| ||||||||||||   ||| |||| |||||   u
    cgc cc      uccuucg ucUGACUCCCCG   UCU GCUC GAaaa   u
-guu   g  ---cca       u            GAG   G    -     ccu 


mirna_id: mmu-mir-679
hairpin:
c       uuGG         -U   U    G  ---u  g 
 uauggcu    ACUGUGAGG  GAC CUUG Ug    gu a
 |||||||    |||||||||  ||| |||| ||    ||  
 auaucGA    UGACACUCC  CUG GAAC Ac    cg u
-       ----         UC   -    G  uuuu  g 


mirna_id: mmu-mir-495
hairpin:
a       U  -       --A   U    uuu 
 aaGAAGU GC CCAUGUU   UUU UCGc   u
 ||||||| || |||||||   ||| ||||    
 UUCUUCA CG GGUACAA   AAg agug   a
-       -  U       ACA   c    uuu 


mirna_id: mmu-mir-680-1
hairpin:
aga   -G       ---    A  U    Gc   -ag  a  c cc    a    g 
   agu  GGCAUCU   GCUG CA GGGG  cga   uc gg g  agga gcgg c
   |||  |||||||   |||| || ||||  |||   || || |  |||| |||| a
   ucg  cuguggg   cgac gu cucc  gcu   ag cc c  uucu cguu c
---   ga       uuc    a  u    ua   aca  g  u ua    a    u 


mirna_id: mmu-mir-680-2
hairpin:
    A  U  -    -A G     cgaa      c cc   c     gcac  ug  uc 
GGGC UC GC UGAC  U GGGGc    gucagg g  agg aucgg    uc  ga  u
|||| || || ||||  | |||||    |||||| |  ||| |||||    ||  ||  u
cucg gg cg acug  g uuccg    caguuc c  ucc uaguu    ag  cu  a
    -  u  g    gg g     ---a      - --   -     -aca  gu  cu 


mirna_id: mmu-mir-680-3
hairpin:
gggggauuuaacaaagaacaaaa        ---C        ACA     G aga 
                       aagguGGG    AUCUGCUG   UGGGG c   a
                       ||||||||    ||||||||   ||||| |    
                       uucuacuu    uggacgac   aucuc g   g
-----------------------        cuca        -gg     g acu 


mirna_id: mmu-mir-681
hairpin:
g    ---        C    ----A   cca     u     -uc      -  u  ccc 
 CAGC   CUCGCUGG AGGC     GCU   gagug ggcug   cucauc ac cu   u
 ||||   |||||||| ||||     |||   ||||| |||||   |||||| || ||    
 guug   gggcgacc uccg     uga   cucac uugac   ggguag ug ga   a
-    aca        -    ggacc   -cg     -     uuu      a  -  cga 


mirna_id: mmu-mir-682
hairpin:
gccguc    -u  gg        uuc     u  aaaca    -ccg cg  gc 
      ggca  cu  cacugugg   cugca ga     gugg    g  gg  c
      ||||  ||  ||||||||   ||||| ||     ||||    |  ||  u
      ccGU  GA  GUGACACU   GACGU Cu     cacc    c  cc  g
------    CU  -A        ---     -  ----c    acaa au  ag 


mirna_id: mmu-mir-449c
hairpin:
a g   aag g        u    cA  C      UU      U       -a  ac 
 g aug   u ugggugug cagg  GG AGUGCA  GCUAGC GGcuguu  ga  u
 | |||   | |||||||| ||||  || ||||||  |||||| |||||||  ||   
 c uac   a acucacgu gucU  CC UCACGU  CGAUCG UUGACaa  cu  u
- g   -ga g        c    -C  A      --      -       cc  au 


mirna_id: mmu-mir-683-1
hairpin:
u   --aa  c   - ug     c      gg  -c     uaaaagccaagcuuu 
 ggg    gu cag c  ggagg ugcagu  ac  caggc               u
 |||    || ||| |  ||||| ||||||  ||  |||||                
 ccc    ua guc g  cCUCC GUGUCG  UG  GUCCg               c
-   gagg  c   g gu     U      AA  UC     uaggugacgucacgu 


mirna_id: mmu-mir-684-1
hairpin:
       aauc  u   uaagu     u      c   -u  a a 
guagggc    ug cuu     aggga aaauua ucu  ga c a
|||||||    || |||     ||||| |||||| |||  || | a
cguucug    AC GAA     UCCCU UUUGAu aga  cu g a
       -cgA  U   ---CU     -      -   uc  a u 


mirna_id: mmu-mir-684-2
hairpin:
ug       auc  u   uaagu     u      c   -u  a a 
  uagggca   ug cuu     aggga aaauua ucu  ga c a
  |||||||   || |||     ||||| |||||| |||  || | a
  guucugu   AC GAA     UCCCU UUUGAu aga  cu g a
--       -gA  U   ---CU     -      -   uc  a u 


mirna_id: mmu-mir-686
hairpin:
g  a   c  g   -uuauA    -       --AC    --A    a   aua a au 
 cc cag ag ugc      UUGC UUCCCAG    GGUG   AGAa gua   g g  c
 || ||| || |||      |||| |||||||    ||||   |||| |||   | |   
 gg guc uc acg      gacg ggggguc    ccac   ucuu cau   c c  a
-  -   u  g   uuaggc    u       ggua    ggg    c   --g - ca 


mirna_id: mmu-mir-719
hairpin:
---------uuuaggugcuuaaagaaca  A    --    A    AAA     uu   gu 
                            gu UCUC  GGCU CAGA   AUGUU  ugg  g
                            || ||||  |||| ||||   |||||  |||   
                            ca agag  ccga guuu   uguag  guc  a
cccacguaagacggugaagaaccgaaga  -    ga    a    --g     gu   gu 


mirna_id: mmu-mir-687
hairpin:
auagucugacacacauuuua    A   U        GCA    -auc     uu 
                    caCU UCC GGAAUGCA   AUGA    cuggg  a
                    |||| ||| ||||||||   ||||    |||||  u
                    guga agg ucuuaugu   uacu    gacuu  u
--------------------    a   u        ---    gucu     ug 


mirna_id: mmu-mir-688
hairpin:
gaaa    -   gaa   -      gg      uu    ag 
    gggc agu   gaa aaguag  gcuugc  gggg  a
    |||| |||   ||| ||||||  ||||||  ||||   
    cccg ucg   CUU UUCAUC  CGGACG  CUcc  g
----    c   -ac   A      AG      --    ac 


mirna_id: mmu-mir-690
hairpin:
        u  --g     aau     gua    agu   aguaa  aa   -     uc 
uguguuuu gu   gagcu   uggcu   uuaa   gcu     ga  cau ucucc  c
|||||||| ||   |||||   |||||   ||||   |||     ||  ||| |||||  a
auauaAAA CA   CUCGG   AUCGG   AAuu   cga     cu  gua agagg  g
        C  ACA     ---     --A    -gu   -----  cg   g     uc 


mirna_id: mmu-mir-691
hairpin:
--------gc    uua       -       cuu   ----  ug 
          ugau   uuuuugc uuucuuc   ggg    uc  c
          ||||   ||||||| |||||||   |||    ||   
          auug   AAAGACG AGAGAAG   CCU    ag  u
uauaauuuau    -uA       G       --U   UAua  uu 


mirna_id: mmu-mir-692-1
hairpin:
a   u     -    a ---aacca  -gc   c   c    - cc      -   u 
 ggg ggcag ggcc c        gc   aga ugg gcgc c  agggau cuc g
 ||| ||||| |||| |        ||   ||| ||| |||| |  |||||| ||| g
 ccu ccguc ccgg g        cg   uCU ACU CGCG G  UCUCUA gag g
-   u     u    a gaucaaca  aac   C   C    A UU      u   u 


mirna_id: mmu-mir-692-2
hairpin:
-------gguggcagggccacaacca  -gc   c   c    - cc      -   u 
                          gc   aga ugg gcgc c  agggau cuc g
                          ||   ||| ||| |||| |  |||||| ||| g
                          cg   uCU ACU CGCG G  UCUCUA gag g
ccuuccgugucuccggaggaucagca  aac   C   C    A UU      u   c 


mirna_id: mmu-mir-693
hairpin:
a    ua                       C       U    g 
 guug  ggcaugcucauuaCAGCCACAUC GAAAGUU UCcu g
 ||||  ||||||||||||||||||||||| ||||||| ||||  
 cgac  ucguacgaguAAUGUCGGUGUAG CUUUCGA Ggga c
-    cc                       A       C    u 


mirna_id: mmu-mir-694
hairpin:
----aa    ca   -      u  c     a  caa 
      aggc  gcu caggca cg uuuca cc   g
      ||||  ||| |||||| || ||||| ||    
      ucug  cGA GUCCGU GU AAAGU gg   a
uccguc    -a   A      U  A     C  acc 


mirna_id: mmu-mir-146b
hairpin:
gacugagagaacuu    -  -  u   u  G        A    A    C   ga  u 
              uggc ca cc ggc cU AGAACUGA UUCC UAGG Ugu  gc c
              |||| || || ||| || |||||||| |||| |||| |||  ||  
              aucg gu gg ccg GG UCUUGACU AGGG AUCC Gca  cg u
-------cuaccau    u  c  c   U  -        C    -    C   ga  a 


mirna_id: mmu-mir-669b
hairpin:
augaaugua           a    GU        C     C     ug cu 
         ugugcaugugu uauA  UUUGUGUG AUGUG AUGUg  u  a
         ||||||||||| ||||  |||||||| ||||| |||||  |   
         acgcguacgca aUAU  AAACACAC UACAU UACau  a  u
---------           c    AC        A     A     gu au 


mirna_id: mmu-mir-669a-2
hairpin:
ca   a     a     g    GU        C     C    C   au 
  ugu ugugc ugugu uauA  UGUGUGUG AUGUU AUGU Uau  u
  ||| ||||| ||||| ||||  |||||||| ||||| |||| |||   
  aca acacg acgca aUAU  ACACACAC UACAA UACA aua  u
--   c     a     a    GC        A     -    u   ag 


mirna_id: mmu-mir-669a-3
hairpin:
uuccucca    --     a     g    GU        C     C    C   au 
        ugua  ugugc ugugu uauA  UGUGUGUG AUGUU AUGU Uau  u
        ||||  ||||| ||||| ||||  |||||||| ||||| |||| |||   
        acau  acacg acgca aUAU  ACACACAC UACAA UACA aua  u
----agac    ac     a     a    GU        A     -    u   ag 


mirna_id: mmu-mir-467b
hairpin:
cc     c  AA   CC  C             ua 
  gugug GU  GUG  UG AUGUAUAUGcgug  u
  ||||| ||  |||  || |||||||||||||  a
  cacaC CA  CAC  AC UACAUAUAcguau  u
ua     A  AC   AC  A             uu 


mirna_id: mmu-mir-669c
hairpin:
   --cca   a       g     A  G         GA         -   cau 
ccu     ugu ugugcau ugugu UA UUGUGUGUG  UGUGUGUau uug   a
|||     ||| ||||||| ||||| || |||||||||  ||||||||| |||    
gga     aca acacgug acacA AU AACACACAC  ACACACAUa aau   u
   cacag   a       a     A  G         --         c   aaa 


mirna_id: mmu-mir-297b
hairpin:
       gc        --a         G  C   AAC      a    a   u 
ucuauuu  uugugugu   uAUGUAUGU UG AUG   AUGUgu uaug aua a
|||||||  ||||||||   ||||||||| || |||   |||||| |||| |||  
agguaaa  gacacaca   auacguaca ac UAC   UACACA AUAC UAU c
       -a        aac         a  A   CCA      C    A   a 


mirna_id: mmu-mir-695
hairpin:
uca    -gaaucc   A      AUA       --  ----A   ca   c       c 
   cgag       uAG UUGGGC   GGUGACU  GA     gua  cag ugccuuu u
   ||||       ||| ||||||   |||||||  ||     |||  ||| ||||||| u
   gcuc       auc ggcucg   ccacugg  cu     cau  guc acggaaa a
---    aucgucu   -      --g       uc  gguuc   ug   -       c 


mirna_id: mmu-mir-499
hairpin:
gggu       u  UA        A          ---  uc 
    gggcagc gU  AGACUUGC GUGAUGUUUa   gc  c
    ||||||| ||  |||||||| ||||||||||   ||   
    uccgucg CG  UCUGAACG CACUACAAGu   cg  u
----       U  UG        A          gua  uc 


mirna_id: mmu-mir-696
hairpin:
ggucugucgcggugccug         - --     -     uuccu  uuu c 
                  aagcugucc c  cgagc cacgc     gc   c c
                  ||||||||| |  ||||| |||||     ||   |  
                  uucgacGGG G  GUUCG GUGCG     cg   g g
------------------         U UC     U     uucgu  uuc g 


mirna_id: mmu-mir-455
hairpin:
cucccu  u ug  c          U      A   C   aa 
      gg g  ag gUAUGUGCCU UGGACU CAU Gug  c
      || |  || |||||||||| |||||| ||| |||  g
      cu c  uC CAUAUACGGG ACCUGA Gua cac  c
-----a  c gu  A          C      C   c   ga 


mirna_id: mmu-mir-491
hairpin:
aa ug      cu   a  U      CC   C          a 
  u  acuuag  ggg AG GGGGAA  CUU CAUGAGGagu g
  |  ||||||  ||| || ||||||  ||| |||||||||| a
  a  ugaguc  ucC UC UCCCUU  GAA GUAUUCcuca a
-- gu      ag   A  U      -A   C          c 


mirna_id: mmu-mir-697
hairpin:
gagu      guguccugg   u       g     u u   a    --  ua    -a au 
    ggggau         aug uggucuu acagg c cag ggug  ac  ccac  c  u
    ||||||         ||| ||||||| ||||| | ||| ||||  ||  ||||  |   
    ccucug         uac gucAGAG UGUCC G GUC CUAC  ug  ggug  g  g
----      --------a   u       G     U -   -    AA  gc    gg aa 


mirna_id: mmu-mir-698
hairpin:
ucaucucugcccucacuguaagggagggu  u   ua  U   --U GG  AG       cagu 
                             gg ggc  UG GGG   G  AC  GGAUGUU    u
                             || |||  || |||   |  ||  |||||||    g
                             cc cug  ac CCC   C  UG  CUUACag    c
--------------------agugguaga  c   ug  U   UUC UU  CU       aaau 


mirna_id: mmu-mir-700
hairpin:
uuc      a  AA     -C        CU     --ggg g 
   acuggg gU  GGCUC  UUCCUGUG  UGCag     a a
   |||||| ||  |||||  ||||||||  |||||     |  
   ugaccc CA  CUGAG  AAGGGCGC  ACguc     u a
---      C  -C     CC        --     aagca a 


mirna_id: mmu-mir-701
hairpin:
    a  auc  - -     gc    aa      G  GA          uuguau 
gugg gc   ua c cuuga  aagu  UUAGCC CU  AAUAGAUGGA      a
|||| ||   || | |||||  ||||  |||||| ||  ||||||||||      g
cacc cg   au g gaacu  uuca  GAUCGG GA  UUAUCUAUcu      a
    -  aca  c u     -a    cC      A  AA          uggagu 


mirna_id: mmu-mir-702
hairpin:
cgggacaagGU           UU  CA     -   ccau  -    -  --  c     g 
           GAGUGGGGUGG  GG  UGggu ugc    gg ggac uc  ga gcugu c
           |||||||||||  ||  ||||| |||    || |||| ||  || |||||  
           CUCGCCCCAUU  CC  ACCCG acg    cc ccug ag  cu cgaca c
----------C           UC  --     U   cacu  u    u  uc  c     c 


mirna_id: mmu-mir-703
hairpin:
ag       aa   u   -    cau a      CU   G ---           uug 
  acugguu  uga aac aaug   c uAAAAC  UCA A   AGGAAAGAAug   u
  |||||||  ||| ||| ||||   | ||||||  ||| |   |||||||||||    
  ugacuaa  acu uug uuau   g auuuug  ggu u   uuuuuuuuuac   g
--       -a   u   a    --u a      ac   g gug           cag 


mirna_id: mmu-mir-704
hairpin:
-------------g        u    g     gucag   ca   a 
              cugggagc agag augug     cug  agg u
              |||||||| |||| |||||     |||  ||| c
              GAUCCUCG UCUC UGUAC     GAc  ucc u
caucaguuguuagg        -    G     ----A   --   u 


mirna_id: mmu-mir-705
hairpin:
augucccagua  GGU           U    -A   a     uga 
           gu   GGGAGGUGGGG GGGC  cag gggaa   c
           ||   ||||||||||| ||||  ||| |||||    
           ca   cccuccauccc ccug  guc cucuu   u
---------ua  -au           u    ac   -     ucu 


mirna_id: mmu-mir-706
hairpin:
       CC                  -    aa  a   u 
AGAGAAA  CUGUCUCAAAAAAcaaaa aaac  ac aaa u
|||||||  |||||||||||||||||| ||||  || ||| a
uuuuuuu  gguagaguuuuuuguuuu uuug  ug uuu c
       uc                  a    ga  a   u 


mirna_id: mmu-mir-707
hairpin:
---------g   u    UC   -    U      C    g 
          gca gCAG  AUG CCGC UGCCUA Gcuu u
          ||| ||||  ||| |||| |||||| ||||  
          cgu uguu  uac ggcg acgggu cgag g
gcuuaacggg   -    ga   u    u      a    u 


mirna_id: mmu-mir-708
hairpin:
cuguguuugaaa     --a        A           A     C  G gg   a  a 
            ugggg   cugcccuc AGGAGCUUACA UCUAG UG G  uag ug c
            |||||   |||||||| ||||||||||| ||||| || |  ||| || u
            auucc   gacgggaG UCUUCGAGUGU AGAUC AC c  guu ac u
------------     ggg        A           C     A  a aa   c  g 


mirna_id: mmu-mir-709
hairpin:
u    - g u          ua     aag     u     ua  a 
 gucc c u ucucugcuuc  cucag   ugcuc gagca  ga c
 |||| | | ||||||||||  |||||   ||||| |||||  ||  
 uAGG G A GGAGACGGAG  Ggguc   acgag uuugu  cu u
-    A G C          --     acg     -     -c  g 


mirna_id: mmu-mir-710
hairpin:
    c  ---g   -aa    a   -    -  UGG           cuu      aaa 
cucu uc    uca   uaga gCC AAGU CU   GGAGAGUUGAG   ggugug   a
|||| ||    |||   |||| ||| |||| ||   |||||||||||   ||||||    
gagg ag    ggu   gucu ugg uuca ga   uuucucaacuu   ccauac   c
    u  guga   gaa    a   a    a  ---           -cc      agu 


mirna_id: mmu-mir-711
hairpin:
   g      -    uga          a    g      gc 
cau uuccua acuu   aucucuucuu gggu cuucag  a
||| |||||| ||||   |||||||||| |||| ||||||   
gua aggggu uGAA   UAGAGAGGGG CCCA GGGguc  a
   g      c    -UG          -    -      ga 


mirna_id: mmu-mir-712
hairpin:
      cuu   - UU        C   -  C   uc      -   - -      g 
ucuccg   CUC C  CACCCGGG GGU AC cgc  cggcgc cgg c ccgcgg a
||||||   ||| |  |||||||| ||| || |||  |||||| ||| | ||||||  
aggggc   gag G  GUGGGCCC CCA UG GCG  gccgcg gcc g ggcgcc c
      -uu   c UU        -   C  A   Ua      u   u c      g 


mirna_id: mmu-mir-713
hairpin:
g    -   -c          auug   a   a a   g u  a   --g   a   c 
 gccu auc  ggaggcccug    guu gug g cuu a ug cau   agc ccu c
 |||| |||  ||||||||||    ||| ||| | ||| | || |||   ||| ||| c
 uggg uag  ccuucgggau    CGA CAC C GAA U AC GUg   uug gga u
-    c   aa          ---a   -   A G   G C  -   aga   -   u 


mirna_id: mmu-mir-714
hairpin:
  A  -A    C GU  -    -       -       u  g   g g   g   c 
CG CG  GGGC G  CG GUCG Cccugcg gugguug cu ugu u uuu ggu u
|| ||  |||| |  || |||| ||||||| ||||||| || ||| | ||| ||| u
gc gc  cccg c  gc cggu ggggcgc cgccagc gg gcg a ggg ucg g
  c  gg    - ug  g    u       u       u  g   g g   g   c 


mirna_id: mmu-mir-500
hairpin:
cuccucu    c  c     -         UAU UG     UUAG   uau 
       gcuc cc ucucu AAUCCUUGC   C  GGUGC    Ugc   c
       |||| || ||||| |||||||||   |  |||||    |||   u
       cgag gg agagA UUGGGAACG   G  CCACG    Acg   c
-------    u  a     C         --- GU     --UA   uaa 


mirna_id: mmu-mir-501
hairpin:
    -   ---  -u       c       UC     U   U     AAAa   uau 
cuuc ugc   uc  gcucauc ucucuAA  CUUUG CCC GGGUG    ugc   u
|||| |||   ||  ||||||| |||||||  ||||| ||| |||||    |||   u
gagg acg   ag  cgagugg agggGUU  GGAAC GGG CCCAC    Acg   g
    u   ucu  uc       a       UA     -   -     -GUA   uau 


mirna_id: mmu-mir-717
hairpin:
uuguccgcuauca   -uacc         c      ----A   A    -  C     C  a 
             cug     gucauuuuu aguCUC     GAC GAGA UA CUUCU Ug a
             |||     ||||||||| ||||||     ||| |||| || ||||| ||  
             gac     uagugaaga uuaggg     uug cucu gu gaaga ac u
-------------   cuaaa         c      aagcc   c    c  c     u  u 


mirna_id: mmu-mir-450b
hairpin:
             UUU     U        G     auaa 
gauacagaauuau   UGCAG AUGUUCCU AAUAc    c
|||||||||||||   ||||| |||||||| |||||    a
cuauguuuuaaUA   ACGUU UACAAGGG UUAug    u
             CGU     U        -     cgaa 


mirna_id: mmu-mir-505
hairpin:
aaau      ac    u   GG      G    A        -u  g 
    ugaugc  ccag ggG  AGCCAG AAGU UUGAUGUU  cu c
    ||||||  |||| |||  |||||| |||| ||||||||  ||  
    acuaug  gguc cUC  UUGGUC UUCA AACUGCga  gg c
----      -a    u   UU      G    C        uu  a 


mirna_id: mmu-mir-718
hairpin:
ac   cc         gaa     c  ag  c    u       gg 
  gcc  cguguggcg   ggccg gg  gg aaga ggcggcg  u
  |||  |||||||||   ||||| ||  || |||| |||||||  c
  cgg  gcacGCUGU   CCGGC CC  CC UUCu ccgccgc  g
--   -a         GGG     -  -G  -    -       ga 


mirna_id: mmu-mir-721
hairpin:
------ggaagaCA U     UAAA   GG   aa    ac  g  a 
              G GCAAU    AGG  GAA  aagu  cu gg u
              | |||||    |||  |||  ||||  || || g
              c cguua    uuc  uuu  uuua  ga uc u
aagguucguccuca -     -uug   uu   ac    -a  g  u 


mirna_id: ppt-MIR1211
hairpin:
u         g - -aa                       gggug          c 
 uacaugauu u c   cAGGGAGGGAUGGUUAUGCAAGa     caagaggugg a
 ||||||||| | |   |||||||||||||||||||||||     ||||||||||  
 auguauuga a g   GUCCUUCUCUGCCAGUACGUucu     guucucuacu g
a         g u gaC                       acgaa          a 


mirna_id: ppt-MIR1212
hairpin:
g  ug    g      c  c      g     a    -    g c 
 ua  agga uugcau cu ugcugu cccac ugcg ucgu g g
 ||  |||| |||||| || |||||| ||||| |||| |||| |  
 au  uccu gGCGUA GA ACGACA GGGUG gcgc ggcg u c
-  gu    a      A  U      -     C    c    g g 


mirna_id: ppt-MIR1214
hairpin:
u u      guuu   A         UC      CCa        uu 
 g gguugg    ucU CUAUGAGAA  UCGCGG   aggugguu  g
 | ||||||    ||| |||||||||  ||||||   ||||||||   
 c ccgauc    aga gauacucuu  agcguc   uuuaccag  g
a c      aagu   c         uu      ---        ca 


mirna_id: ppt-MIR1215
hairpin:
    a   u       -c    U  A           G       caacuugaacagcauucg 
cgug agg acuggag  UCAU GC AAACUGUAUAC Auccuuu                  a
|||| ||| |||||||  |||| || ||||||||||| |||||||                   
guac ucc ugaccuc  ggug cg uuugacauaug uaggaga                  a
    a   c       aa    u  c           g       cucguuaucgguguucga 


mirna_id: ppt-MIR1216
hairpin:
        -   uuu     -uc   u  cu    a         U       C       U u   aa g       gu 
gcgagguu ggu   guaug   cag gu  guca ugucguUGA GGUGAUG GCUUGUA C cga  g accauuc  g
|||||||| |||   |||||   ||| ||  |||| ||||||||| ||||||| ||||||| | |||  | |||||||   
cgcuccaa cca   cauac   guc cg  cagu acagcaacu ccacuac cgaacau g gcu  u ugguaag  a
        a   ccu     uuu   -  cc    -         c       c       u u   gc g       gg 


mirna_id: ppt-MIR1217
hairpin:
   ug      g   au    GU        G     GG     c   u -   g 
ucc  uuucug uug  cuUG  AUCAUGUU CAAAU  Caaaa cug g acc g
|||  |||||| |||  ||||  |||||||| |||||  ||||| ||| | ||| a
agg  gaaggc aac  GAAC  UAGUACGA GUUUA  guuuu gac c ugg a
   uu      -   au    UG        A     Aa     u   u a   u 


mirna_id: ppt-MIR1218
hairpin:
   u    aca   g   u      c   C              CU     -  -gaa        ag u 
cag gauu   ugu ucg gguagg auC UUAGAGUCGUAGGC  CUGug ug    uucaagau  u c
||| ||||   ||| ||| |||||| ||| ||||||||||||||  ||||| ||    ||||||||  | a
guc uuaa   aca ggc cuaucc uag agucucagcauccg  gacac ac    aaguuuug  g c
   u    ---   g   u      a   a              ag     u  acac        cu a 


mirna_id: ppt-MIR1219a
hairpin:
u          -c       a  ca  -  C      -  U U  C       a        ucc   a 
 gaagugugga  gauggag gu  gc cu UUCCUG CC C CA UAGCUUc ucccuucc   cua a
 ||||||||||  ||||||| ||  || || |||||| || | || ||||||| ||||||||   ||| u
 cuucacaccu  uuacuuc ca  cg ga aaggac gg g gu aucgagg agggaggg   gau u
a          au       c  --  c  u      u  u -  u       a        ucu   u 


mirna_id: ppt-MIR1219b
hairpin:
  C       C     C   C   aucccuucgaaccc 
cu UUCCUGC UCUCA UAG UUc              g
|| ||||||| ||||| ||| |||              a
ga aaggacg agggu auc aag              a
  c       a     u   -   gaauggaaucaugg 


mirna_id: ppt-MIR1219c
hairpin:
--------------------------------------------------------------------ggccuCU      C   -  C       a     c     cu 
                                                                           UCCUGC UCU CA UAGCUUc ucccu agaag  g
                                                                           |||||| ||| || ||||||| ||||| |||||   
                                                                           aggacg aga gu aucgagg aggga ucuuc  a
ccggugauguugucuucuuaaacucauguguuuauuaccuucugucuaaccaaccucagguucucacguuagaua      -   a  c       a     c     ua 


mirna_id: ppt-MIR1219d
hairpin:
           c  ag ac    a  -  U      C  CU  C         c      u c   a 
agaggcgugug gg  c  cgug gu cu UUCCUG CU  CA UAGCUUcuu ccuccc g cug g
||||||||||| ||  |  |||| || || |||||| ||  || ||||||||| |||||| | ||| u
ucuuuguacgc cc  g  gcac cg ga aaggac ga  gu aucgaggaa ggaggg c gac c
           a  cu au    g  c  u      a  ug  u         u      u u   g 


mirna_id: ppt-MIR1220a
hairpin:
        c            c     g    u c    ugauuuucucaauaucuucacguugguggccacguucgaacauaucccaugcgggcaacucc 
acuucuug acuccucuaucu ccucg cacc g acag                                                              g
|||||||| |||||||||||| ||||| |||| | ||||                                                              g
ugaagaac ugaggaGAUAGA GGAGU GUGG C Uguc                                                              c
        u            A     G    C U    ucagcauccaaacucguucccauaggaggucuaccauucguugcgaccggcacauguggaug 


mirna_id: ppt-MIR1220b
hairpin:
      c              c     g    --u   c    auuuuaucaauaucuucacguugguggccacguucgaacauaucccaugcgggcaacuc 
acuucu ggacuccucuaucu ccucg cacc   gca aguc                                                           c
|||||| |||||||||||||| ||||| ||||   ||| ||||                                                           g
ugaaga cuugaggaGAUAGA GGAGU GUGG   Ugu ucag                                                           g
      a              A     G    CCU   c    cauccaaacucguccccauaggaggucuaccauucguugcgaccggaacauguggaugc 


mirna_id: ppt-MIR533b
hairpin:
      -cc               C             -    a  c          gac  u 
ggagga   gauauggaGAGCUGU CAGGCUGUGAGGG gagc cu guauucuuuu   cu u
||||||   ||||||||||||||| ||||||||||||| |||| || ||||||||||   || g
ucuccu   cuauguCUCUCGACA GUCUGACACUCcc cucg ga cauaagggag   ga c
      ucu               U             u    c  -          -aa  u 


mirna_id: ppt-MIR535d
hairpin:
      A   A     A      cg      g    u   g 
ggUGAC ACG GAGAG GCACGC  gaaugc uuca gca c
|||||| ||| ||||| ||||||  |||||| |||| ||| g
ccacug ugc cucuc cgugcg  cuugug aggu cgu a
      c   c     c      ag      g    c   g 


mirna_id: ppt-MIR1221
hairpin:
    -   g   a    gc        G      -         a    uu   cu   g         uuccgcuggcggcgguuugugu 
aacu gau gag aacu  cgUGGAUG UGUGCA GGGUCAAAu cucu  ugg  uuc auguguguu                      c
|||| ||| ||| ||||  |||||||| |||||| ||||||||| ||||  |||  ||| |||||||||                       
uugg cug cuc uuga  GCAUCUAU ACACGU CCCGGUuua gagg  acu  aag uauacacag                      g
    u   g   c    ac        G      A         c    --   --   -         guugggugauuccaguggugaa 


mirna_id: ppt-MIR1222a
hairpin:
    aca   c    -----             cu         a          u    aa    gc 
cacg   uag uggu     uguugugggcauu  ugugcuagu aacuccuuca gcag  gugc  u
||||   ||| ||||     |||||||||||||  ||||||||| |||||||||| ||||  ||||  u
gugc   auu gcca     acaacacccguaa  AUAUGGUUA UUGAGGAAGU cguc  cacg  c
    --a   a    guagu             au         C          U    --    au 


mirna_id: ppt-MIR1223a
hairpin:
          -     caa                    c  -   ----    uagua    gc 
agacuagagg gucag   gggugugugacucuauaauc aa gcu    gugc     gauc  u
|||||||||| |||||   |||||||||||||||||||| || |||    ||||     ||||   
ucugaucuuc caguc   UCCACAUACUGAGAUGUUag uu cga    cacg     cuag  u
          a     ACC                    c  a   acca    ugaag    aa 


mirna_id: ppt-MIR390c
hairpin:
       uua   A        G          c  -  ca   uuu      -      uu   a  g 
gguauaa   caG GCUCAGGA GGAUAGCGCC au cu  guc   uuuagc auccaa  gaa ug u
|||||||   ||| |||||||| |||||||||| || ||  |||   |||||| ||||||  ||| || u
ccauguu   GUU CGAGUCUU CCUGUCGCgg ua ga  cgg   agaucg uagguu  cuu ac a
       uac   A        A          -  c  ag   --c      a      uc   -  a 


mirna_id: hsv1-mir-H1
hairpin:
  a    aa      A       AC   AA   GA  ucc  a 
cg gggg  cggggG UGGAAGG  GGG  GUG  ag   ug u
|| ||||  |||||| |||||||  |||  |||  ||   || a
gc cccc  gccUCC ACCUUCC  CCC  CAC  Uc   ac c
  -    cg      C       GU   CC   -A  -cu  c 


mirna_id: bta-mir-18b
hairpin:
cu       --   U    C   U     UAgu  ag ag 
  uguguUA  AGG GCAU UAG GCAGU    ga  c  c
  |||||||  ||| |||| ||| |||||    ||  |   
  acacggu  ucc cgua auc cguca    cu  g  u
--       cu   u    a   c     ---u  aa ac 


mirna_id: bta-mir-29a
hairpin:
            uuu       c    ucaa 
augacugauuuc   ugguguu agag    u
||||||||||||   ||||||| ||||    a
uAUUGGCUAAAG   ACCACGA UCuu    u
            UCU       -    uuaa 


mirna_id: bta-mir-103-1
hairpin:
cu   c  --    u  u           c   u g a 
  gcc uc  ggcu cu uacagugcugc uug u c u
  ||| ||  |||| || ||||||||||| ||| | |  
  cgg AG  UCGG GA AUGUUACGACG Aac a g a
--   a  UA    -  C           -   u g u 


mirna_id: bta-mir-148a
hairpin:
              -  -a    cc    -   aa 
gaggcaaaguucug ag  cacu  gacu cug  u
|||||||||||||| ||  ||||  |||| |||  a
cucUGUUUCAAGAC UC  GUGA  CUga gau  u
              A  AC    --    a   ag 


mirna_id: bta-mir-151
hairpin:
    c            CA          c ucu 
ccug ccUCGAGGAGCU  CAGUCUAGUa g   c
|||| ||||||||||||  |||||||||| |    
ggac GGAGUUCCUCGA  GUCAGAUCau c   a
    a            -A          c ccu 


mirna_id: bta-mir-16b
hairpin:
caua     uc     U         UA        C  --    aa 
    cuugu  cgcug AGCAGCACG  AAUAUUGG gu  agua  a
    |||||  ||||| |||||||||  |||||||| ||  ||||  u
    ggaca  gcgau ucgucgugu  uuauaacc ca  uuau  a
--ag     gu     u         ua        a  aa    aa 


mirna_id: bta-mir-20a
hairpin:
    c   -A                 G   -  uu 
guag acU  AAGUGCUUAUAGUGCAG UAG ug  u
|||| |||  ||||||||||||||||| ||| ||   
cguc uga  uucacgaguauuacguc auc au  a
    a   aa                 -   u  ug 


mirna_id: bta-mir-21
hairpin:
u     gU        A     A     A    u a 
 gucgg  AGCUUAUC GACUG UGUUG CUgu g a
 |||||  |||||||| ||||| ||||| |||| | u
 cagUC  UCGGGUAG CUGAC ACAAc ggua c c
a     UG        -     G     -    - u 


mirna_id: bta-mir-221
hairpin:
-----ccaaca       cuag   a    -  ug   u         auuu    -      
           uccaggu    ggc ugaa cc  gca acaauguag    cugu guuug 
           |||||||    ||| |||| ||  ||| |||||||||    |||| |||| u
           aggucca    ucg acUU GG  CGU UGUUACAUC    GAca cgagu 
uucuugcacaa       ----   g    U  GU   C         ----    a      


mirna_id: bta-mir-222
hairpin:
gcugcu  aau ugu    a  c   au              -     auc   ucuu 
      gg   g   aggu cc uca  ggcucaguagccag uguag   cug    u
      ||   |   |||| || |||  |||||||||||||| |||||   |||    u
      cc   c   ucua gg agu  cUGGGUCAUCGGUC ACAUC   gac    g
-----u  -au --u    c  u   cu              U     GAu   uaau 


mirna_id: bta-mir-26b
hairpin:
-u  -    ga   -   U        UC           u ug 
  gc ccgg  ccc agU CAAGUAAU  AGGAUAGGUUg g  c
  || ||||  ||| ||| ||||||||  ||||||||||| |   
  cg ggcc  ggg ucg guucauua  ucuuguccgac c  u
cc  u    gg   c   -        cc           - ug 


mirna_id: bta-mir-27a
hairpin:
uggccu    a  A         UG  U       g uccac 
      gggg gc GGGCUUAGC  CU GUGAGCA g     a
      |||| || |||||||||  || ||||||| |      
      cccc cG CUUGAAUCG  GA CACUUgu c     u
------    -  C         GU  -       g uaaac 


mirna_id: bta-mir-30d
hairpin:
guu  U         CCC           guacca 
   gu GUAAACAUC   GACUGGAAGCU      c
   || |||||||||   |||||||||||       
   cg cguuuguag   cugacuuucga      a
cau  u         --a           aucgac 


mirna_id: bta-mir-320a-2
hairpin:
aaaaacgaaaaagag        uu       c      g 
               gccuucuc  cccgguu uucccg a
               ||||||||  ||||||| ||||||  
               CGGGAGAG  GGGUCGA AAgggc g
gggagaaggaaaaAG        UU       A      u 


mirna_id: bta-mir-484
hairpin:
   -   CUC       UCCCGAUaaaccucu 
gUC AGG   AGUCCCC               a
||| |||   |||||||                
cgg ucc   ucggggg               a
   c   --a       gcccuuccagggaua 


mirna_id: bta-mir-499
hairpin:
--------------------       c   c  UA        A          acucc 
                    gggcggg ggc gU  AGACUUGC GUGAUGUUUa     u
                    ||||||| ||| ||  |||||||| ||||||||||     c
                    ccugccc ucg cg  ucugaacg cacuacaagu     u
ugggacggguccgucgcacc       u   u  ug        a          gcacc 


mirna_id: bta-mir-99a
hairpin:
cc          A         UC   U      g  aag 
  cauuggcaua ACCCGUAGA  CGA CUUGUg ug   u
  |||||||||| |||||||||  ||| |||||| ||    
  gugacugugu UGGGUAUCU  GCU GAACac gc   g
gu          c         UC   C      -  cag 


mirna_id: bta-mir-125a
hairpin:
u     c u   c UC  UG   C    UA        ----  a 
 gccgg c cug g  CC  AGA CCUU  ACCUGUGa    gg c
 ||||| | ||| |  ||  ||| ||||  ||||||||    ||  
 cggcc g ggu c  gg  ucu ggag  uggacacu    cc g
c     u c   c ga  gu   u    --        ggga  u 


mirna_id: bta-mir-125b-1
hairpin:
c     c   u  -a    U    C           Au     c 
 gcgcg cuc ca  UCCC GAGA CCUAACUUGUG  guuua c
 ||||| ||| ||  |||| |||| |||||||||||  ||||| g
 cgcgc gag gu  aggg uucu ggauugggcac  uaaau u
c     u   c  cg    -    c           -c     u 


mirna_id: bta-mir-126
hairpin:
u     - a           U       C cug   c 
 gacgg g CAUUAUUACUU UGGUACG G   uga a
 ||||| | ||||||||||| ||||||| |   |||  
 cuguc C GUAAUAAUGAG GCCAUGC c   acu c
a     G -           U       u -aa   u 


mirna_id: bta-mir-145
hairpin:
c   u  u     c  UC    U  C            uagau 
 acc ug ccuca gG  CAGU UU CCAGGAAUCCCU     g
 ||| || ||||| ||  |||| || ||||||||||||     c
 ugg ac ggagu uc  guca aa gguccuuagggg     u
u   u  u     -  uu    u  a            uagaa 


mirna_id: bta-mir-181a-2
hairpin:
ugccagggccaggacccagucuuca     cu      A   U      CU       A    ggga 
                         gagga  ccaagg ACA UCAACG  GUCGGUG GUUu    u
                         |||||  |||||| ||| ||||||  ||||||| ||||    u
                         uuccu  gguucc ugu aguugc  cagccac caaa    u
------------------------a     ug      a   c      --       -    aaag 


mirna_id: bta-mir-199a-1
hairpin:
uggaagcuucuggagau   -    c   gcC       U        C   --Uca  ac 
                 ccu gcuc guc   CCAGUGU CAGACUAC UGU     gg  a
                 ||| |||| |||   ||||||| |||||||| |||     ||   
                 gga cggg cag   GGUUACA GUCUGAUG ACA     cc  a
----------------g   a    u   AUU       C        -   uguug  gu 


mirna_id: bta-mir-205
hairpin:
      UC           C        ucucg 
cucuug  CUUCAUUCCAC GGAGUCUG     u
||||||  ||||||||||| ||||||||     a
gaggac  gaagugaggug cuuuagac     c
      uu           a        caacc 


mirna_id: bta-mir-27b
hairpin:
-    -    gacg                  auug        ugac     
 accu cucu    aggugcagagcuuagcug    gugaacag    uggu 
 |||| ||||    ||||||||||||||||||    ||||||||    ||| u
 ugga gaga    uccaCGUCUUGAAUCGGU    CACUUguu    gccu 
g    a    --ag                  --GA        --uc     


mirna_id: bta-mir-30b
hairpin:
-     uuu      caU          U  -A        ua  ac 
 ccaag   ucaguu   GUAAACAUCC AC  CUCAGCUg  ac  a
 |||||   ||||||   |||||||||| ||  ||||||||  ||   
 gguuc   agucga   CAUUUGUAGG UG  GGGUCggc  ug  c
a     ---      cUU          -  GA        --  ag 


mirna_id: bta-mir-31
hairpin:
uccuguaacuu   acu      gA     G   C         -U   gaa 
           gga   ggagag  GGCAA AUG UGGCAUAGC  guu   c
           |||   ||||||  ||||| ||| |||||||||  |||    
           ccu   ucucuc  ccguu uac accguaucg  caa   u
----------g   -gu      ua     a   a         uc   gcg 


mirna_id: bta-mir-34b
hairpin:
     cg    -guA       U      C        cu u 
gugcu  guuu    GGCAGUG AAUUAG UGAUUGua  c c
|||||  ||||    ||||||| |||||| ||||||||  |  
cacgg  caaa    ccgucac uugauc acuaacau  g a
     aa    acua       c      -        uc u 


mirna_id: dre-mir-190b
hairpin:
u       a    - UG              CG    - uuucuu 
 guuacag cuau g  AUAUGUUUGAUAUU  GUUG c      u
 ||||||| |||| |  ||||||||||||||  |||| |       
 caguguc gaua c  uauacagacuauaa  caac g      a
a       a    u cu              au    u uacuau 


mirna_id: dre-mir-722
hairpin:
                           g  c      g ---a  c 
ggaacggaguggaauuugaaacguuuu gc aaaaau u    gc a
||||||||||||||||||||||||||| || |||||| |    ||  
ucuugccucgcuUUAGACUUUGCAAAG CG UUUUUg g    cg u
                           A  U      g gaaa  g 


mirna_id: dre-mir-499
hairpin:
   g   --     g    UA       C           -ga  a 
acu aga  gggag cagU  AGACUUG AGUGAUGUUUA   ga a
||| |||  ||||| ||||  ||||||| |||||||||||   ||  
uga ucu  uccuc gucg  ucugaau ucacuacaagu   cu u
   g   ug     g    ug       u           aca  g 


mirna_id: dre-mir-723
hairpin:
u  --          aG    U     A       ACU       a 
 gc  guagagauaa  ACAG UUUAA UGAUGUU   UUuuuuc a
 ||  ||||||||||  |||| ||||| |||||||   |||||||  
 cg  caucucuauU  UGUC AAAUU ACUACAG   AAagagg a
a  aa          CG    U     A       ---       u 


mirna_id: dre-mir-724
hairpin:
      a u      -        UU  C A     agu ag 
cagcag c ggauUU AAAGGGAA  UG G CUGUU   c  a
|||||| | |||||| ||||||||  || | |||||   |   
gucguc g ucuaga uuuuccuu  ac c gacaa   g  u
      c u      a        cc  a c     gau uu 


mirna_id: dre-mir-725-1
hairpin:
         a            ug           gaag 
cugcagugc cauugcuaggaa  guggcugagau    a
||||||||| ||||||||||||  |||||||||||     
gacgucgcg gUGAUGAUCUUU  UACUGACUUua    g
         c            GU           ggac 


mirna_id: dre-mir-726
hairpin:
     c     c    aa   c      uc      a  c  g 
ucagu guaug cugg  uuc gcuagu  ugaacu uu gu a
||||| ||||| ||||  ||| ||||||  |||||| || || u
aguca cauau GGCU  AAG CGAUCA  ACUUga aa cg u
     a     a    -C   A      UC      a  -  g 


mirna_id: dre-mir-727
hairpin:
       u      C            CU  -    ccg   ccau 
cuguaug cauuuU AGUCUUCAAUUC  CC CAGC   uac    c
||||||| |||||| ||||||||||||  || ||||   |||    g
gacaugu gugaaA UCAGAAGUUGAG  GG GUUG   gug    a
       c      U            -C  A    --a   ucaa 


mirna_id: dre-mir-728
hairpin:
     uc              ag   aua       a  gaa 
caucu  ugaggaaauguagu  acu   aguauac gu   c
|||||  ||||||||||||||  |||   ||||||| ||    
gugga  acuCUUUUGCAUCA  UGA   UCAUAug ca   a
     ga              CA   --A       -  agu 


mirna_id: dre-mir-729
hairpin:
    aagg     c a          g      ug  a   a  uguaagu 
cguc    gccau c gugacccggg uuguau  ua cca gc       g
||||    ||||| | |||||||||| ||||||  || ||| ||        
guag    uggua g caUUGGGUCC AGCAUA  AU GGU Cg       u
    ----     a a          -      GU  G   A  uaguacc 


mirna_id: dre-mir-34c
hairpin:
     u  gg     A  C    CA      U      aauc 
ugcug gu  ucacc GG AGUG  GUUAGU GAUUAC    c
||||| ||  ||||| || ||||  |||||| ||||||     
augau cg  agugg cc ucac  caauca cuaaug    a
     -  ga     a  a    uc      -      aaau 


mirna_id: dre-mir-730
hairpin:
        cg      U       CA       -U U  uc 
ggguucuc  gucUCC CAUUGUG  UGCUGUG  G cu  a
||||||||  |||||| |||||||  |||||||  | ||  g
cucagggg  cggagg guaacgu  gcgacac  c gg  u
        au      u       cc       uc u  uc 


mirna_id: dre-mir-731
hairpin:
u     ug    -  AA       UUUUC      AUC  ca    u 
 gaugc  aucu gg  UGACACG     UCCCGG   Gc  gaaa a
 |||||  |||| ||  |||||||     ||||||   ||  ||||  
 cuacg  uaga cc  acugugc     agggcc   cg  cuuu u
a     gu    a  -g       -uuca      -ac  --    g 


mirna_id: dre-mir-732
hairpin:
     aag              aaa       gu   uuaa 
agaua   uuccaccgaggguu   uguuuug  auu    u
|||||   ||||||||||||||   |||||||  |||    a
uuuau   gaggUGGCUCUCAA   ACGAAAC  uaa    g
     gua              GAG       UC   cugu 


mirna_id: dre-mir-733
hairpin:
u   uuuu   ua   -   c  uU C        AGC    U      u 
 ggc    ccg  gug ucg ug  G GUUGGUUU   UCAG GGUUac u
 |||    |||  ||| ||| ||  | ||||||||   |||| ||||||  
 ccg    ggc  cac ggu ac  u caacuaaa   aguc cuagug c
a   ---u   uc   u   -  uu c        --a    c      u 


mirna_id: dre-mir-15c
hairpin:
       c g   A       C  C       U  aca  a 
ccuuaga c cua AGCAGCG GU AUGGUUU Ca   uu g
||||||| | ||| ||||||| || ||||||| ||   ||  
ggaauuu g gau ucgucgu ua uaccgaa gu   aa a
       u a   c       u  c       c  -gg  g 


mirna_id: dre-mir-734
hairpin:
u     ug     u a  c            ggc     gugga   u 
 gauau  agagc g ac auucugcagcau   ugccu     ucc c
 |||||  ||||| | || ||||||||||||   |||||     ||| u
 cuaug  ucuuG C UG UAAGACGUCGUA   AUGga     agg g
a     gu     C A  C            --A     ----a   g 


mirna_id: dre-mir-735
hairpin:
        --cgaa         uu  ucuu 
ggcugguc      ggcgguggg  ag    c
||||||||      |||||||||  ||    u
cugacCAG      UCGCCACCC  UC    c
        UUCAAA         UC  cccu 


mirna_id: dre-mir-736
hairpin:
u                           g        au 
 cuacugacagagaagcuuuuuguuugu uuauguuu  u
 ||||||||||||||||||||||||||| ||||||||   
 gaugauugucuUUUUGAAAAACAAGCA AAUGuaaa  u
g                           G        cu 


mirna_id: dre-mir-737
hairpin:
   cag   -      u  ug                     ---g   a 
cca   cug cugugc gu  uuuuuuuagguuuugauuuuu    uga a
|||   ||| |||||| ||  |||||||||||||||||||||    |||  
ggu   gau gacgcg cA  AAAGAAAUCCAAAACUAAaag    gcu u
   --a   a      u  UA                     agua   g 


mirna_id: dre-mir-738
hairpin:
   AC   -          ----  CU       a       cu      g 
GCU  GGC CCGCGUCGGG    AC  Cucgucu gcgacuu  ccccuc g
|||  ||| ||||||||||    ||  ||||||| |||||||  ||||||  
cgg  ccg ggcgcggccc    ug  gagcggg cgcugga  ggggag g
   cu   u          cucc  -u       g       ug      g 


mirna_id: dre-mir-740
hairpin:
  a    u    -   AAAA               u        -   acu    ga 
gc uuug gugc AUA    GUGGUAUGGUACAGU ugcuuuua ggu   uuuu  c
|| |||| |||| |||    ||||||||||||||| |||||||| |||   ||||   
cg ggac caug uau    uaccaugccauguca gcgaaaau ccg   aagg  a
  g    -    g   gcca               u        a   acu    ug 


mirna_id: xtr-let-7b
hairpin:
     U               G      -----gg      ug 
cuggc GAGGUAGUAGUUUGU UAGUUa       gggcag  g
||||| ||||||||||||||| ||||||       ||||||   
gaccg uuccgucaucaaaca aucaau       cccguu  u
     -               g      agaggua      ug 


mirna_id: xtr-mir-1a-2
hairpin:
u    g                g      ----   a 
 ggga acauacuucuuuauau uccaua    ugg a
 |||| |||||||||||||||| ||||||    ||| g
 cucu UGUAUGAAGAAAUGUA AGGUau    acc u
-    A                -      cgua   g 


mirna_id: xtr-mir-1a-1
hairpin:
a    uuu                     ac     ugaaca 
 ccug   ggaguacauacuucuuuaugu  ccaua      u
 ||||   |||||||||||||||||||||  |||||       
 ggac   uuuuAUGUAUGAAGAAAUGUA  GGUau      a
-    uau                     -A     cguaac 


mirna_id: xtr-mir-7-1
hairpin:
--    u  -      a  u        A     A       U      uuuagau 
  ugga gu ugguuu gu cugugUGG AGACU GUGAUUU GUUGuu       a
  |||| || |||||| || |||||||| ||||| ||||||| ||||||        
  aucu cg accaga ca gguauacc ucuga cgcuaaa caacag       a
ac    c  u      -  c        g     -       -      uuacaac 


mirna_id: xtr-mir-7-3
hairpin:
--     u   uu    A     G      U       -uu    a 
  cuggg cgg  UGGA GACUA UGAUUU GUUGuuu   auaa a
  ||||| |||  |||| ||||| |||||| |||||||   ||||  
  gaccc guc  accu cugau gcuaaa cgacaaa   uguu g
ag     c   uc    -     -      -       cac    u 


mirna_id: xtr-mir-7-2
hairpin:
ga    cag    -a u  u  U  A     A       U     --     gc 
  ggug   gcug  c cu ug GG AGACU GUGAUUU GUUGu  uguaa  c
  ||||   ||||  | || || || ||||| ||||||| |||||  |||||   
  cuau   cgac  g ga ac cc ucuga cacugaa caaca  acguu  u
-a    -aa    cc u  c  u  g     -       -     gu     au 


mirna_id: xtr-mir-9a-1
hairpin:
-       guug   UC               G      u uug 
 gggguug    uua  UUUGGUUAUCUAGCU UAUGAg g   u
 |||||||    |||  ||||||||||||||| |||||| |    
 ccccaau    aaU  AAGCCAAUAGAUCGA AUacuu c   c
a       -aaa   GA               A      c uaa 


mirna_id: xtr-mir-9a-2
hairpin:
g    ug   g   UC               G      ugua 
 gaag  guu uua  UUUGGUUAUCUAGCU UAUGAg    u
 ||||  ||| |||  ||||||||||||||| ||||||     
 cuuc  caa aaU  AAGCCAAUAGAUCGA AUacuu    u
-    cu   a   GA               A      uugg 


mirna_id: xtr-mir-9b
hairpin:
--    c  UC       AC      G     g   a 
  guuu ug  UUUGGUU  CUAGCU UAUGA uau a
  |||| ||  |||||||  |||||| ||||| ||| c
  caaa aU  AAGCCAA  GAUCGA AUacu gua u
ac    u  GC       CA      A     -   a 


mirna_id: xtr-mir-10a
hairpin:
ga    cc    cu        A    G    UC          ---   gc 
  uuug  uguc  cuguaugU CCCU UAGA  CGAAUUUGUG   uga  g
  ||||  ||||  |||||||| |||| ||||  ||||||||||   |||   
  aaac  acag  gacguaua gggg gucu  gcuuaaacac   acu  c
gc    --    uu        -    g    gu          uau   aa 


mirna_id: xtr-mir-10b
hairpin:
aa     u        A    G     C          -ug  u 
  cguug cuauaugU CCCU UAGAA CGAAUUUGUg   gu c
  ||||| |||||||| |||| ||||| ||||||||||   ||  
  guagc gguauaua gggg aucuu gcuuagacac   ca g
ac     u        -    g     a          uga  u 


mirna_id: xtr-mir-10c
hairpin:
--       A    G    AU          ugagu 
  uauaugC CCCU UAGA  CGAAUUUGUg     u
  ||||||| |||| ||||  ||||||||||      
  guauaug gggg aucu  gcuuagacac     c
gg       -    g    cu          caagu 


mirna_id: xtr-mir-15a
hairpin:
     acguaaa UA        UA          gg  a 
ccuug       g  GCAGCACA  AUGGUUUGUG  uu c
|||||       |  ||||||||  ||||||||||  || a
ggaac       c  cgucgugu  uaccggacgu  ag c
     acaaaac gc        ca          gg  a 


mirna_id: xtr-mir-15b
hairpin:
ug      agaa   U       C UC      UGCAug      
  uccuaa    gug AGCAGCA A  AUGAUU      cugua 
  ||||||    ||| ||||||| |  ||||||      |||| u
  aggguu    uac ucgucgu u  uacuaa      gauau 
aa      auag   u       u uu      -ucuua      


mirna_id: xtr-mir-16c
hairpin:
--uu        -C    A        -uucau  c 
    UAGCAGCA  GUAA UACUGGAG      ga c
    ||||||||  |||| ||||||||      || a
    aucgucgu  cauu augaccuc      cu u
uuau        uu    -        ucacgu  a 


mirna_id: xtr-mir-16a
hairpin:
--      ag c            -  A        UG  a 
  gccagc  u cuuUAGCAGCAC GU AAUAUUGG  uu a
  ||||||  | |||||||||||| || ||||||||  || a
  cgguug  a gagaucgucgug ca uuauaacc  gg a
uc      ga u            u  a        cu  u 


mirna_id: xtr-mir-17
hairpin:
     ga       -CA        A  G     G   U a   a 
gucaa  guaaugu   AAGUGCUU CA UGCAG UAG g uuu a
|||||  |||||||   |||||||| || ||||| ||| | |||  
caguu  uauuacg   UUCACGGA GU ACGUC Auc c aag c
     -a       aUG        A  G     -   - -   a 


mirna_id: xtr-mir-19a
hairpin:
g   u  u                 --      ---    ag 
 cag cu cuguuaguuuugcauag  uugcac   uaca  a
 ||| || |||||||||||||||||  ||||||   ||||  a
 guc ga gguAGUCAAAACGUAUC  AACGUG   augu  a
-   c  c                 UA      Uug    aa 


mirna_id: xtr-mir-19b-2
hairpin:
-u                 -  -       ------    uug 
  ucaugguuaguuuugca gg uuugcau      ccag   u
  ||||||||||||||||| || |||||||      ||||    
  gguauuAGUCAAAACGU CC AAACGUG      gguc   u
ac                 A  U       Ucacuc    uuc 


mirna_id: xtr-mir-23a-2
hairpin:
cu u       a   --          a       ggaaa      
  g ggcuggu gga  uuccuggcag gugauuu     uguau 
  | ||||||| |||  |||||||||| |||||||     |||| g
  c cugacua CCU  AGGGACCGUU CACUAaa     acaug 
-g c       a   UU          A       -----      


mirna_id: xtr-mir-26-1
hairpin:
       g     UU         C  GA        uucc 
ggcugcu ccugg  CAAGUAAUC AG  UAGGCugu    u
||||||| |||||  ||||||||| ||  ||||||||    c
ucgauga ggacu  guucauuag uc  auccggca    a
       a     uu         u  uc        cgaa 


mirna_id: xtr-mir-26-2
hairpin:
ug   g  c cU          C    U      uaaug 
  ggc cu g  UCAAGUAAUC AGGA AGGCug     u
  ||| || |  |||||||||| |||| ||||||     c
  ccg ga c  gguucauuag ucuu uccgac     u
-a   a  c ag          c    u      ugucc 


mirna_id: xtr-mir-27a
hairpin:
-c    g cca          gu          -c   ca 
  ggcg c   gggcuuagcu  auugugagca  ugu  c
  |||| |   ||||||||||  ||||||||||  |||  u
  ccgC G   CUUGAAUCGG  UGACACUUgu  acg  c
cu    - --C          --          cc   cu 


mirna_id: xtr-mir-27b
hairpin:
-a       acca                  auug        u  uug 
  ccuuucu    aggugcagagcuuagcug    gugaacag ga   a
  |||||||    ||||||||||||||||||    |||||||| ||   u
  ggagaga    uccaCGUCUUGAAUCGGU    CACUUguu cu   u
cg       --ag                  --GA        u  ccc 


mirna_id: xtr-mir-29d
hairpin:
uc    g                 gu      uuaac 
  agga gcugguuucauguggug  uuagau     u
  |||| |||||||||||||||||  ||||||     g
  ucCU UGACUAAAGUAUACCAC  GAUcug     c
au    G                 --      uaaca 


mirna_id: xtr-mir-29b
hairpin:
-   cg   -         uu      a  u    u  ucc 
 ucc  gaa gcugguuuc  guggug cu agau ua   a
 |||  ||| |||||||||  |||||| || |||| ||    
 agg  cUU UGACUAAAG  UACCAC GA Ucua gu   u
g   au   G         UU      -  -    c  cgc 


mirna_id: xtr-mir-30a
hairpin:
   a           CUC           g gaag 
gcg cUGUAAACAUC   GACUGGAAGcu u    c
||| |||||||||||   ||||||||||| |    a
cgu GACGUUUGUAG   CUGACUUUCgg a    g
   C           --A           g aguu 


mirna_id: xtr-mir-30b
hairpin:
gu       uaU          UA       C   uaug 
  auuaguc   GUAAACAUCC  CACUCAG Ucg    u
  |||||||   ||||||||||  ||||||| |||    a
  uagucag   cguuuguggg  guggguc agu    u
uc       cuc          gg       -   ccaa 


mirna_id: xtr-mir-30c-1
hairpin:
a     ca    u auU           ACA        ug gaa 
 ccaug  gcag g   GUAAACAUCCU   CUCUCAGC  u   c
 |||||  |||| |   |||||||||||   ||||||||  |   a
 gguac  cguc c   cauuuguggga   gagggucg  g   u
a     --    c ccu           --a        gu gaa 


mirna_id: xtr-mir-34a
hairpin:
-c    -  ug     uU        C  A            gg acg 
  ugug ag  uuucu  GGCAGUGU UU GCUGGUUGUUgu  c   u
  |||| ||  |||||  |||||||| || ||||||||||||  |    
  acac uc  gaaga  ccgucaua aa cgacuaacgaug  g   u
uu    g  uu     uc        u  a            aa aua 


mirna_id: xtr-mir-34b-2
hairpin:
--uuCA  C   G       C        uuaua 
      GG AGU UAGUUAG UGAUUGug     u
      || ||| ||||||| ||||||||      
      cc uca aucgauc acuaacgu     c
aaaaua  a   a       -        uuaaa 


mirna_id: xtr-mir-92a-2
hairpin:
  c    ug   g     uu  u   c    guaug 
uc ucug  ggu gggau  gu gca uacu     u
|| ||||  ||| |||||  || ||| ||||      
ag gggu  CCG CCCUG  CA CGU AUga     a
  u    GU   G     UU  -   U    aaagu 


mirna_id: xtr-mir-98
hairpin:
uc    -cu  u    aU                 U    ----------      uuu 
  ugcc   cu cagg  GAGGUAGUAAGUUGUAU GUUg          uggggg   u
  ||||   || ||||  ||||||||||||||||| ||||          ||||||    
  augg   ga gucc  uuccgucauucgacaua caau          accccu   u
ua    uac  c    -c                 u    agaggauuaa      uua 


mirna_id: xtr-mir-99
hairpin:
ua     A         UC   U    U  ug  u 
  acaua ACCCGUAGA  CGA CUUG Gg  aa u
  ||||| |||||||||  ||| |||| ||  ||  
  ugugu uggguaucu  gcu gaac uc  uu c
ac     c         uu   c    -  gu  c 


mirna_id: xtr-mir-106
hairpin:
--    -A          A      G   Aau 
  ugcA  AAGUGCUUAU GUGCAG UAG   u
  ||||  |||||||||| |||||| |||   u
  acgu  uucacgaaua cacguc auc   a
cu    cc          c      -   caa 


mirna_id: xtr-mir-107
hairpin:
cu     --c    u  u           c   u   a 
  gcuuu   agcu cu uacaguguugc uug ggc u
  |||||   |||| || ||||||||||| ||| ||| g
  cgaaA   UCGG GA AUGUUACGACG Aac uug g
-a     CUA    -  C           -   -   a 


mirna_id: xtr-mir-122
hairpin:
-g    aUGG       C           --U  c 
  agcu    AGUGUGA AAUGGUGUUUG   gu a
  ||||    ||||||| |||||||||||   ||  
  ucga    ucacacu uuaccgcaaac   cg g
ca    guaa       a           uau  a 


mirna_id: xtr-mir-125b-1
hairpin:
u    cc   u  -a    U    C           -  g    g 
 gcac  cuc ca  UCCC GAGA CCUAACUUGUG Au uuua c
 ||||  ||| ||  |||| |||| ||||||||||| || ||||  
 cgug  gag gu  aggg uucu ggauugggcac ua aaau u
-    uu   u  cg    -    c           c  a    u 


mirna_id: xtr-mir-125b-2
hairpin:
ga   uu     UC  UG   C            ggauuuu 
  cuu  ccuag  CC  AGA CCUAACUUGUGA       u
  |||  |||||  ||  ||| ||||||||||||       u
  gag  ggauc  gg  ucu ggauugaacacu       a
gg   gc     ca  gu   c            aacaacg 


mirna_id: xtr-mir-126
hairpin:
gg                U       C cug  uc 
  cugugCAUUAUUACUU UGGUACG G   ug  a
  |||||||||||||||| ||||||| |   ||   
  gacgCGUAAUAAUGAG GCCAUGC c   ac  c
--                U       U -aa  ua 


mirna_id: xtr-mir-128-2
hairpin:
gu    cu    c        uua      aa    g gag 
  gcag  ggaa gggggccg   cacugu  gaga u   u
  ||||  |||| ||||||||   ||||||  |||| |    
  uguc  ucUU UCUCUGGC   GUGACA  CUcu g   a
--    au    U        CAA      --    g aug 


mirna_id: xtr-mir-129-1
hairpin:
-       u     -       C   CU      G   ua  uaa 
 guccuuc caaau CUUUUUG GGU  GGGCUU Cug  ug   a
 ||||||| ||||| ||||||| |||  |||||| |||  ||    
 cgggagg guuua gaaaaac cca  cccgaa ggc  au   u
g       c     c       c   uu      g   cg  cca 


mirna_id: xtr-mir-129-2
hairpin:
--  u    -g       C  -UCU      G   --uu  ca 
  uc caaa  CUUUUUG GG    GGGCUU Cug    cu  a
  || ||||  ||||||| ||    |||||| |||    ||  u
  ag guuu  gaaaaac cc    cccgaa gac    ga  c
gg  c    aa       -  uauu      g   cuau  aa 


mirna_id: xtr-mir-130a
hairpin:
--   u             u          a  -----a   gu 
  cug ccagugcccuuuu auguuguacu cu      gug  c
  ||| ||||||||||||| |||||||||| ||      |||   
  gac gguUACGGGAAAA UGUAACGUGA ga      cac  a
gg   c             U          C  aaaaaa   ac 


mirna_id: xtr-mir-130c
hairpin:
au   ug        uc         a    aau 
  ccg  gcccuuuu  uguuguacu cugg   u
  |||  ||||||||  ||||||||| ||||   u
  ggu  CGGGAAAA  AUAACGUGA gauu   g
uc   UA        UU         C    aau 


mirna_id: xtr-mir-130b
hairpin:
cc c    ca       cc         a  g  gca 
  g cuga  cucuuuc  uguugcacu cu ug   g
  | ||||  |||||||  ||||||||| || ||    
  c gacU  GGGAAAG  GUAACGUGA ga au   u
gu u    AC       UA         C  a  aag 


mirna_id: xtr-mir-132
hairpin:
cu    --  a    a         u            ---   g 
  gucu  cc gggc accguggcu uagauuguuacu   gua u
  ||||  || |||| ||||||||| ||||||||||||   |||  
  uaga  gg cucG UGGUACCGA AUCUGACAAUgg   cgu u
cg    ac  g    C         C            uua   c 


mirna_id: xtr-mir-133c
hairpin:
--     uuu   aa       aa  u  a        aacug 
  aaugc   gcu  agcuggu  aa gg accaaauc     u
  |||||   |||  |||||||  || || ||||||||      
  uuacg   cga  UCGACCA  UU CC UGGUUuag     u
ag     ugu   CG       AC  C  C        guaag 


mirna_id: xtr-mir-133d
hairpin:
- ug            -   aa   a   c   aaccc 
 c  guugcggcuggu gaa  gga cca auc     a
 |  |||||||||||| |||  ||| ||| |||     g
 g  caaCGCCGACCA CUU  CCU GGU uag     a
u gu            A   CC   -   U   gaaaa 


mirna_id: xtr-mir-133b
hairpin:
--    u         ca  c  a      u  g   u 
  cugc auggcuggu  aa gg accaag cc ucu c
  |||| |||||||||  || || |||||| || ||| c
  gacg uAUCGACCA  UU CC UGGUUu gg aga u
au    u         AC  C  C      -  -   u 


mirna_id: xtr-mir-135-1
hairpin:
a   aaa     ugug                U            -ua  a 
 gau   uucac    guguuuUAUGGCUUUU AUUCCUAUGUGA   gu a
 |||   |||||    |||||||||||||||| ||||||||||||   ||  
 cug   aagug    cauaaaguaccgaagg uagggauguacu   ua u
a   -aa     -uua                -            cug  a 


mirna_id: xtr-mir-138
hairpin:
cg   c        AG             UCa      gacca 
  gug ggagcagc  CUGGUGUUGUGAA   ggccgu     c
  ||| ||||||||  |||||||||||||   ||||||     u
  cac cuucguug  gaccacaacacuu   ucggca     c
--   u        -g             -ca      aaaga 


mirna_id: xtr-mir-139
hairpin:
ug       -   U  A            - aua 
  uauUCUA CAG GC UGUGUCUccagu c   u
  ||||||| ||| || |||||||||||| |    
  auaaggu guc cg acauagggguca g   a
ca       u   u  -            c gag 


mirna_id: xtr-mir-140
hairpin:
cc             -c  A             A       uu   uc 
  cucucuguguccu  cc GUGGUUUUACCCU UGGUAGg  acg  a
  |||||||||||||  || ||||||||||||| |||||||  |||   
  gaggggcauagga  gg caccaagauggga accaucu  ugu  g
uc             ca  -             c       --   cg 


mirna_id: xtr-mir-142-1
hairpin:
--       gc  c           A         u  aca ga 
  cagugca  ca cCAUAAAGUAG AAGCACUAC ag   g  c
  |||||||  || ||||||||||| ||||||||| ||   |  u
  gucaugu  gu GGUAUUUCAUC UUUGUGAUG Uc   c  g
gg       ga  A           C         -  --g aa 


mirna_id: xtr-mir-146a
hairpin:
--  a  a u   u    u  A       AUU         guua 
  ca ug g ucu agcu UG GAACUGA   CCAUAGGUU    g
  || || | ||| |||| || |||||||   |||||||||    a
  gu ac c agg ucga ac cuugauu   gguauccag    g
cg  c  c u   u    u  -       cgu         auug 


mirna_id: xtr-mir-148b
hairpin:
ug  -  ac   g       ug         u  a    cc    gugag 
  ag ga  agc uuugagg  aaguucugu au cacu  ggcu     u
  || ||  ||| |||||||  ||||||||| || ||||  ||||     a
  uc cu  ucg gagcucU  UUCAAGACA UA GUGA  CUga     a
-a  a  --   g       GU         C  C    --    aggug 


mirna_id: xtr-mir-150
hairpin:
--  c  UC   A  C            gaua 
  cu UC  CCA CC UUGUACCAGAGu    a
  || ||  ||| || ||||||||||||     
  ga ag  ggu gg gacauggucuca    u
ag  a  uc   a  a            aggg 


mirna_id: xtr-mir-153-1
hairpin:
ca  g      u  -              -       u ua  u 
  cg cugccc ug ucauuuuugugauu ugcagcu g  au u
  || |||||| || |||||||||||||| ||||||| |  ||  
  gu gacggg ac AGUGAAAACACUGA ACGUUga c  ug u
gg  g      u  u              U       - uc  g 


mirna_id: xtr-mir-155
hairpin:
-----uaU         U    A        uu uaa 
        UAAUGCUAA CGUG UAGGGGuu  u   u
        ||||||||| |||| ||||||||  |    
        auuacgauu guac auccucag  a   a
guacuauu         -    -        uu uac 


mirna_id: xtr-mir-181b-1
hairpin:
aa  u    aucAA         CUG          -ga  u 
  gg caca     CAUUCAUUG   UCGGUGGGuu   gu a
  || ||||     |||||||||   ||||||||||   || a
  cc gugu     guaaguagc   agucgcucga   ca g
cc  u    -caac         --a          aca  a 


mirna_id: xtr-mir-181b-2
hairpin:
aa   -     auaAA         CU           guagu 
  ugg cugca     CAUUCAUUG  GUCGGUGGGuu     u
  ||| |||||     |||||||||  |||||||||||      
  acc gacgu     guaaguaac  uaguuacucga     u
--   a     caaac         --           aaaga 


mirna_id: xtr-mir-182
hairpin:
a  g   ----    u   a   U       U -G      UCA      ugag  a 
 gu gcu    ucuc ggc gug UUGGCAA G  UAGAAC   CAcugg    cu u
 || |||    |||| ||| ||| ||||||| |  ||||||   ||||||    ||  
 cg cga    aggg ccg uAU AACCGUU C  AUCUUG   GUggcc    ga g
a  a   aaua    u   g   C       - AG      ---      --ua  a 


mirna_id: xtr-mir-183
hairpin:
ca  cc  -         g      --AC     GA        ugaaaa 
  uc  uc cuguucugu UAUGGC    UGGUA  AUUCACUG      c
  ||  || ||||||||| ||||||    |||||  ||||||||       
  ag  ag gacgagaca auaccg    accau  uaagugac      a
ca  aa  a         a      ggau     --        uaaaac 


mirna_id: xtr-mir-184
hairpin:
c    au   uu        c      a c     uuuuca 
 cagu  cac  ccuuauca uuuucc g ccagc      u
 ||||  |||  |||||||| |||||| | |||||      g
 guca  gug  GGAAUAGU AAGAGG C GGUug      a
-    gu   UC        C      - A     ucaaac 


mirna_id: xtr-mir-187
hairpin:
--    a    u      a             --   ag  u 
  uggu uacc uugguu caacacaggacau  ggg  cu a
  |||| |||| |||||| |||||||||||||  |||  || c
  accg gugg gACCGA GUUGUGUUCUGUG  ccc  gg u
aa    -    u      C             CU   aa  u 


mirna_id: xtr-mir-192
hairpin:
ga   u        A  A     -          CCa ug   g 
  gug acgggccu UG CCUAU GAAUUGACAG   g  gau u
  ||| |||||||| || ||||| ||||||||||   |  ||| g
  cac ugcuugga ac ggaug cuuaacuguc   c  cug a
uc   c        c  c     u          --- gu   a 


mirna_id: xtr-mir-193
hairpin:
g   -        u          g    g  a  a c   u 
 ugg uuucggag cgggauuuug gggc ag ug g uaa g
 ||| |||||||| |||||||||| |||| || || | |||  
 acu aagguCUU GCCCUGAAAC CCCG UC Ac c auu a
-   g        C          G    G  A  - u   u 


mirna_id: xtr-mir-194-1
hairpin:
ua    g       U         A      G    cuug 
  gugu uaucagg GUAACAGCA CUCCAU UGGA    u
  |||| ||||||| ||||||||| |||||| ||||    c
  cacg guaguuu cauugucgu gaggug accu    c
--    g       u         a      -    uaug 


mirna_id: xtr-mir-194-2
hairpin:
-u     u   a  cU         A      G     --g  g 
  gaugc cau ac  GUAACAGCA CUCCAU UGGAa   ua a
  ||||| ||| ||  ||||||||| |||||| |||||   ||  
  cuaug gua ug  uauugucgu gaggug gccuu   au u
au     u   a  uc         a      -     aua  a 


mirna_id: xtr-mir-199a
hairpin:
aa aa  -     c   gcC       U        C   ---U   ga 
  g  cc ugcuc guc   CCAGUGU CAGACUAC UGU    Cag  c
  |  || ||||| |||   ||||||| |||||||| |||    |||  a
  c  gg acggg cag   GGUUACA GUCUGAUG ACA    guc  a
ga ag  u     u   aUU       C        -   Uguu   gu 


mirna_id: xtr-mir-202-1
hairpin:
--   -     u  u           -A   A        aaaa 
  cuc gcugu cc uUUUCCUAUGC  UAU CCUCUUUg    a
  ||| ||||| || |||||||||||  ||| ||||||||    u
  gag cgacg gg AAAAGGGUACG  AUA GGGGAaau    g
cc   u     c  u           GG   C        guaa 


mirna_id: xtr-mir-202-2
hairpin:
--   -     u  u           -A   A        aaaa 
  cuc gcugu cc uUUUCCUAUGC  UAU CCUCUUUg    a
  ||| ||||| || |||||||||||  ||| ||||||||    u
  gag cgacg gg AAAAGGGUACG  AUA GGGGAaau    a
cc   u     c  u           GG   C        guaa 


mirna_id: xtr-mir-205b
hairpin:
ug   c  UC      U    -C   UC   ug aa 
  cug ug  CUUCAU CCAC  GGA  CUG  u  a
  ||| ||  |||||| ||||  |||  |||  |  u
  gau ac  gaagua ggug  ccu  gac  a  a
--   u  gu      c    ac   ua   cu au 


mirna_id: xtr-mir-206
hairpin:
                      ac     uga  ua 
gaggucacaugcuucuuuauau  ccaua   ac  c
||||||||||||||||||||||  |||||   ||   
cuucGGUGUGUGAAGGAAUGUA  GGUau   ug  a
                      -A     ---  uu 


mirna_id: xtr-mir-210
hairpin:
-   -      a   c    a   acua       u  c  ugcuc 
 ucc agaugc ggu agcc cug    acgcaca ug gc     c
 ||| |||||| ||| |||| |||    ||||||| || ||      
 agg ucuacg ccA UCGG GAC    UGCGUGU ac cg     u
a   a      a   A    C   AGUG       C  -  uaaaa 


mirna_id: xtr-mir-181a-1
hairpin:
--   --ua  u     A   U      CU       A     g au 
  ggc    cu uagug ACA UCAACG  GUCGGUG GUuug u  c
  |||    || ||||| ||| ||||||  ||||||| ||||| |  u
  ccg    gg auuAC UGU AGUUGC  UAGCUAC CAaac g  a
ga   uaac  c     A   C      --       -     g aa 


mirna_id: xtr-mir-181a-2
hairpin:
uu           a A   U      CU       A     agaaagu 
  gagggcuucag g ACA UCAACG  GUCGGUG GUuug       g
  ||||||||||| | ||| ||||||  ||||||| |||||        
  uuuucggaguc C UGU AGUUGC  CGGCUAC CAaau       u
ac           C A   C      --       -     auaaaaa 


mirna_id: xtr-mir-214
hairpin:
uu      aagga           u          aca            aacau 
  ggcugg     guugucaugug cugccugucu   cuugcugugcag     c
  ||||||     ||||||||||| ||||||||||   ||||||||||||     c
  ccgacc     caacaguacac GACGGACAGA   GGACGACAuguc     u
-u      -----           u          CAC            cacuc 


mirna_id: xtr-mir-215
hairpin:
--   -u     c     ggA  A     -          C  cuucca 
  aac  gguaa cagga   UG CCUAU GAAAUGACAG Ca      u
  |||  ||||| |||||   || ||||| |||||||||| ||      a
  uug  ucguu gucuu   ac ggaug cuuuacuguc gu      c
ag   uu     a     aua  c     u          u  acaaac 


mirna_id: xtr-mir-216
hairpin:
ug      aa    cu         CU   A        -c    a 
  gcugug  uugg  UAAUCUCAG  GGC ACUGUGag  aguu a
  ||||||  ||||  |||||||||  ||| ||||||||  ||||  
  cgacac  aauc  auuaggguc  cug ugacacuc  uuaa u
aa      -a    au         -u   g        ua    a 


mirna_id: xtr-mir-217
hairpin:
uu       u  a  C     C          U  ---A     
  gauguug ag UA UGCAU AGGAACUGAU GG    Uccc 
  ||||||| || || ||||| |||||||||| ||    ||| a
  cuacggc uc gu acgua uccuugacua cc    aggg 
au       u  c  c     a          -  gacg     


mirna_id: xtr-mir-218-1
hairpin:
ug   ac   --   a   u      U         CU        gguugugag 
  gua  aag  gcg gau uucugU GUGCUUGAU  AACCAUGU         g
  |||  |||  ||| ||| |||||| |||||||||  ||||||||          
  cau  uuc  cgc cug aaggua cacgaacug  uugguaca         u
-a   cu   ga   a   c      c         uc        aaaugagua 


mirna_id: xtr-mir-218-2
hairpin:
gg        uUU         CU        ------g   ga 
  gguuuucc   GUGCUUGAU  AACCAUGU       gua  a
  ||||||||   |||||||||  ||||||||       |||   
  ccggaagg   cacgaacug  uugguaca       cau  c
ca        uac         uc        aguuaua   aa 


mirna_id: xtr-mir-219
hairpin:
au   g u  c   cuU   U     AA           uucca   g 
  gga c cu gcc   GAU GUCCA  CGCAAUUCUug     aua a
  ||| | || |||   ||| |||||  |||||||||||     |||  
  ccu g gg cgg   cua caggu  guguuaagaac     uau a
--   a u  u   ugu   -     cc           cgaac   a 


mirna_id: xtr-mir-222
hairpin:
----c        au   -     auc   uau 
     gcucagua  cag uguag   cug   a
     ||||||||  ||| |||||   |||   u
     UGGGUCAU  GUC ACAUC   gac   c
auCUC        CG   U     GAc   ugu 


mirna_id: xtr-mir-223
hairpin:
a    gg    ga u              gagucc       aau 
 gugu  cacu  g guauuugacaagcu      gacacuc   g
 ||||  ||||  | ||||||||||||||      |||||||   a
 cacg  guga  C CAUAAACUGUUUGA      CUGUgag   g
-    ga    aC C              ------       aca 


mirna_id: xtr-mir-301-1
hairpin:
     aa   --     c    ---u          ----a       
cugcu  ugu  gugcu ugac    uuauugcacu     cuguac 
|||||  |||  ||||| ||||    ||||||||||     ||||| u
gacga  acg  uaCGA ACUG    GAUAACGUGA     gacaua 
     --   uc     A    UUAU          Cgauc       


mirna_id: xtr-mir-301-2
hairpin:
--   u    c       ---        a  ----g  a 
  gaa ugcu ugacagu   guugcacu cu     ug u
  ||| |||| |||||||   |||||||| ||     ||  
  cuu aCGA ACUGUUA   UAACGUGA ga     ac c
ua   u    A       UGA        C  aguaa  u 


mirna_id: xtr-mir-302
hairpin:
cc      cuuu        u      -   auguc 
  ccacua    aacauugg guacuu ucu     u
  ||||||    |||||||| |||||| |||     u
  GGUGAU    UUGUAACC CGUGAA ggg     u
--      ---U        U      U   aaaaa 


mirna_id: xtr-mir-365-1
hairpin:
cc       a        ac           -----gau    uu 
  gcaggga aaugaggg  uuuugggggca        gugu  c
  ||||||| ||||||||  |||||||||||        ||||  a
  cguucuu uUAUUCCU  AAAAUCCCCGU        caca  c
-a       g        -A           AAUaccau    uu 


mirna_id: xtr-mir-367
hairpin:
          c   -      ac    u  ua 
uuacuguugc uau gugcaa  ucug gc  u
|||||||||| ||| ||||||  |||| ||   
AGUGGUAACG AUG CACGUU  Agau ug  a
          -   U      -A    c  uu 


mirna_id: xtr-mir-383
hairpin:
   -c  A      AA    A        -      a 
cuc  uc GAUCAG  GGUG UUGUGGCU uuuagu g
|||  || ||||||  |||| |||||||| ||||||  
gag  ag cugguc  ucac gacaccga gaauua a
   aa  a      cg    -        c      u 


mirna_id: xtr-mir-425
hairpin:
--  c     A         CAC     U  A  - gaaa 
  gc uuggA UGACACGAU   UCCCG UG gc c    c
  || ||||| |||||||||   ||||| || || |     
  cg aaccu gcugugcua   agggc ac cg g    u
cu  a     c         -ua     u  -  c acac 


mirna_id: xtr-mir-455
hairpin:
-u  c   c ug  g          U      A   C   gaa 
  cc ugg g  ag gUAUGUGCCC UGGACU CAU Gug   g
  || ||| |  || |||||||||| |||||| ||| |||    
  gg acu c  uc cauauacggg accuga gua cac   c
uu  a   c gu  a          u      c   c   gac 


mirna_id: xtr-mir-489
hairpin:
 ug ug c    ug             c       a       
g  g  g uuag  gucguauguauga gucauuu cuggau 
|  |  | ||||  ||||||||||||| ||||||| ||||| u
c  c  c aauC  CGGCAUGUAUACU CAGUGAg gauuuu 
 gu gu a    GU             A       -       


mirna_id: xtr-mir-499
hairpin:
gu   a c        UA       C           Guuaaa 
  gag g gaggcagU  AGACUUG AGUGAUGUUUA      a
  ||| | ||||||||  ||||||| |||||||||||      u
  cuc c cuucguca  ucugaau ucacuacaagu      c
--   c u        ug       u           acuuuu 


mirna_id: xtr-let-7c
hairpin:
u   u  a      uU   G   U            Uuagaa    a    
 gug gc uccagg  GAG UAG AGGUUGUAUGGU      ugac ccc 
 ||| || ||||||  ||| ||| ||||||||||||      |||| || u
 cac cg agguuc  uuc auc uccaacauguca      auug ggg 
u   u  -      cu   g   u            ------    a    


mirna_id: xtr-let-7f
hairpin:
u      U   GU                ----------     gu 
 gcagga GAG  AGUAGAUUGUAUAGUU          uuggg  c
 |||||| |||  ||||||||||||||||          |||||   
 cguccu uuc  ucauuugacauaucaa          agccc  a
g      -   ug                uagagggucu     ac 


mirna_id: xtr-let-7g
hairpin:
--   U        U            uaagg    g     cca 
  ggc GAGGUAGU GUUUGUACAGUu     gucu ugaca   c
  ||| |||||||| ||||||||||||     |||| |||||    
  ccg uuccguca cggacaugucaa     uaga guugu   c
au   -        c            -----    g     cuc 


mirna_id: xtr-let-7i
hairpin:
     U                 U   --------  u     u u 
cuggc GAGGUAGUAGUUUGUGC GUu        gg cgggu g g
||||| ||||||||||||||||| |||        || ||||| | a
gaucg uuccgucaucgaacgcg caa        uc gcccg c c
     -                 u   uagaggug  -     u a 


mirna_id: xtr-mir-1b
hairpin:
gc           u    gc     cuga  g 
  acauacuucuu auau  ccaua    au a
  ||||||||||| ||||  |||||    ||  
  UGUAUGAAGAA UGUA  GGUau    ua a
-A           U    -A     --cg  a 


mirna_id: xtr-mir-9-3
hairpin:
--       UC               G     gu  aa 
  guuucua  UUUGGUUAUCUAGCU UAUGa  gu  a
  |||||||  ||||||||||||||| |||||  ||   
  uaaggaU  AAGCCAAUAGAUCGA AUacu  cg  u
ac       GA               A     gc  aa 


mirna_id: xtr-mir-15c
hairpin:
cuuugaggugaucUA     A  UC          gaaac 
               GCAGC CA  AUGGUUUGUA     a
               ||||| ||  ||||||||||      
               cgucg gu  uaccagacau     a
--------aguucuc     a  cu          agagg 


mirna_id: xtr-mir-18a
hairpin:
gu         -  -U    U   UC   U    A   -  aa u 
  gcuuuuugu cc  AAGG GCA  UAG GCAG UAG ug  g a
  ||||||||| ||  |||| |||  ||| |||| ||| ||  | g
  ugaaaaaua gg  UUCC CGU  AUC CGUC Auc ac  u a
--         c  UC    U   GA   C    -   u  ga u 


mirna_id: xtr-mir-23a-1
hairpin:
cu     cg  gg        ag   g     uauu      
  gacag  gg  auuccugg  aug gauuu    uuggc 
  |||||  ||  ||||||||  ||| |||||    |||| a
  cuguc  CC  UAGGGACC  UAC CUAaa    aaccg 
--     aa  UU        GU   A     ---u      


mirna_id: xtr-mir-24a
hairpin:
       G   A         UA     ucuau 
cucuuGU CCU CUGAACUGA  UCAGU     u
||||||| ||| |||||||||  |||||      
gagGACA GGA GACUUGACU  GGUca     u
       A   C         -C     cacac 


mirna_id: xtr-mir-24b
hairpin:
    c  a   a         uaa    u  uua 
cucc gu ccu cugggcuga   ucag gg   u
|||| || ||| |||||||||   |||| ||   a
gagG CA GGA GACUUGACU   GGUc cc   u
    A  -   C         --C    c  uuc 


mirna_id: xtr-mir-29a
hairpin:
-     u   aagg            uuc       c    ucu 
 acccu uua    augacugauuuc   ugguguu agag   u
 ||||| |||    ||||||||||||   ||||||| ||||   u
 ugggg agu    uaUUGGCUAAAG   ACCACGA Ucuu   u
a     u   --aa            UUU       -    uug 


mirna_id: xtr-mir-30d
hairpin:
   uu  c  U         CCC           ---   ag 
agu  gu gc GUAAACAUC   GACUGGAAGcu   gug  g
|||  || || |||||||||   |||||||||||   |||   
ucg  ca cg cguuugugg   cugacuuucga   uac  c
   gc  u  u         --u           guu   gu 


mirna_id: xtr-mir-92b
hairpin:
ua   a   a        uu     c     uc uuu 
  cag agg ucgggaug  gugca uguug  c   c
  ||| ||| ||||||||  ||||| |||||  |    
  guc UCC GGCCCUGC  CACGU AUaac  g   u
gc   C   -        -U     U     -c ucc 


mirna_id: xtr-mir-93a
hairpin:
au      -cA                 G   c  aa 
  gggcuu   AAGUGCUGUUCGUGCAG UAG uu  u
  ||||||   ||||||||||||||||| ||| ||  a
  cccgaa   uucacggcggguacguc auc ag  a
--      ccc                 -   c  ac 


mirna_id: xtr-mir-93b
hairpin:
--cuuc                 G   c  aa 
      AAGUGCUGUUCGUGCAG UAG uu  u
      ||||||||||||||||| ||| ||  a
      uucacggcggguacguc auc ag  a
gaaccc                 -   c  ac 


mirna_id: xtr-mir-96
hairpin:
gg    cU         G     UU      -uu   c 
  ccug  UUGGCACUA CACAU  UUGCUu   gua a
  ||||  ||||||||| |||||  ||||||   |||  
  ggau  aaccgugau gugua  aacgag   cau u
-a    au         -     uu      uuu   a 


mirna_id: xtr-mir-101a-2
hairpin:
a       cuggc                  a    gucua 
 ggcugcc     ucaguuaucacagugcug ugcu     c
 |||||||     |||||||||||||||||| ||||      
 ccgaugg     AGUCAAUAGUGUCAUGAC AUgg     u
a       uagGA                  -    aaauc 


mirna_id: xtr-mir-103-1
hairpin:
u     uu      --    u  u           c   u g a 
 ucuca  uccuuu  ggcu cu uacagugcugc uug u c u
 |||||  ||||||  |||| || ||||||||||| ||| | |  
 agagu  aggaAG  UCGG GA AUGUUACGACG Aac a g a
-     cu      UA    -  C           -   u g u 


mirna_id: xtr-mir-148a
hairpin:
   u        u            --a    ua    -   aa 
uag cuuuuaaa caaaguucugug   cacu  gacu cug  u
||| |||||||| ||||||||||||   ||||  |||| |||  a
guc gaggguuu GUUUCAAGACAU   GUGA  CUga gau  u
   u        U            CAC    --    c   ag 


mirna_id: xtr-mir-338-1
hairpin:
-   c    g     u   -         aau     - ga 
 guc ccug aacaa auc cugaugcug   gagug g  c
 ||| |||| ||||| ||| |||||||||   ||||| |   
 cgg ggac UUGUU UAG GACUACGAC   CUcgu c  a
a   c    G     U   U         ---     a au 


mirna_id: xtr-let-7e-1
hairpin:
cc  g     U   GU          U     auugggccgcac 
  cu uggga GAG  AGUAGGUUGU UAGUU            c
  || ||||| |||  |||||||||| |||||            c
  ga auccu cuc  ucauccaaca aucaa            a
gu  a     -   ug          c     gagaggguaacc 


mirna_id: xtr-let-7a
hairpin:
gu          cU       U              aggauaac 
  gggcuccagg  GAGGUAG AGGUUGUAUAGUUg        a
  ||||||||||  ||||||| ||||||||||||||        c
  uucggggucc  uucuauc uccgacaugucaau        c
--          cu       c              agaggaaa 


mirna_id: xtr-let-7e-2
hairpin:
--   -   ug   U   GU          U       ----------   u 
  gcc cuu  ggg GAG  AGUAGGUUGU UAGUUgu          ggg u
  ||| |||  ||| |||  |||||||||| |||||||          ||| g
  cgg gaa  ccu uuc  ucaucuaaca aucaaua          ccc c
gu   u   gu   -   ug          u       gguuugcagu   a 


mirna_id: xtr-mir-16b
hairpin:
aa    uc   auU     C   UA         U --a     
  uugc  cgc   AGCAG ACG  AAUAUUGGG g   uaug 
  ||||  |||   ||||| |||  ||||||||| |   ||| a
  aacg  gug   ucguc ugu  uuaugaccc c   guau 
gg    gu   aau     a   ua         - gag     


mirna_id: xtr-mir-20a
hairpin:
--   aa  ug     -A          A      G   uu uu 
  gcu  ag  gugcU  AAGUGCUUAU GUGCAG UAG  u  c
  |||  ||  |||||  |||||||||| |||||| |||  |   
  cga  uc  caugA  UUCACGAGUA UACGUC Auc  a  u
gu   --  cu     AA          A      -   uu ug 


mirna_id: xtr-mir-22
hairpin:
-c     c   aga             -     A      u  uguu 
  uggcc gcu   agcAGUUCUUCAG UGGCA GCUUUa gu    c
  ||||| |||   ||||||||||||| ||||| |||||| ||    c
  aucgg uga   uUGUCAAGAAGUU ACCGU CGAAau cg    u
uc     -   aag             G     -      -  uguc 


mirna_id: xtr-mir-23b
hairpin:
cc  ug   c   u   --          -  c      gug   u 
  gg  ugg ugu ugg  guuccuggca ug ugauuu   agu a
  ||  ||| ||| |||  |||||||||| || ||||||   |||  
  cu  acc aca aCC  UAGGGACCGU AC ACUAaa   uua a
uc  gu   a   c   AU          U  -      --a   g 


mirna_id: xtr-mir-25-1
hairpin:
     ug   a     a        a    c     g  u 
gcugg  uug caggc gagacagg gcaa ugcug ug g
|||||  ||| ||||| |||||||| |||| ||||| || c
cggcu  gac GUCUG CUCUGUUC CGUU ACgau gu c
     gu   A     G        A    -     g  u 


mirna_id: xtr-mir-27c-1
hairpin:
cu    a a  ca          ggcu         -ggu uu 
  cuag g gg  ggacuuagcu    cugugaaca    c  g
  |||| | ||  ||||||||||    |||||||||    |   
  gguc c cC  CUUGAAUCGG    GACACUUgu    g  u
--    a c  AC          ---U         aacu ug 


mirna_id: xtr-mir-29c
hairpin:
  -       cagg         C  UCU       ---Ca     u 
uc ccuuaca    aUGACCGAU UC   UGGUGUU     gaggc c
|| |||||||    ||||||||| ||   |||||||     |||||  
ag ggaaugu    uauUGGCUA AG   ACCACGA     uucug a
  u       --aa         A  UUU       Ucuac     g 


mirna_id: xtr-mir-30c-2
hairpin:
--      cagauacU       U   ACA         g  ga 
  gagaga        GUAAACA CCU   CUCUCAGCu ug  a
  ||||||        ||||||| |||   ||||||||| ||   
  cucucu        cauuugu gga   gggggucga ac  a
gu      --------       c   --a         a  au 


mirna_id: xtr-mir-30e
hairpin:
gg       -    cuc           UU            ug aau 
  gcaguua cagc   UGUAAACAUCC  GACUGGAAGcug  a   a
  ||||||| ||||   |||||||||||  ||||||||||||  |    
  cgucgau gucg   acauuuguagg  cugacuuucgau  u   a
--       c    ---           --            ga agu 


mirna_id: xtr-mir-31a
hairpin:
cc   uucu      gA     GAU             -  gca 
  uag    agagag  GGCAA   GUUGGCAUAGCUG uu   u
  |||    ||||||  |||||   ||||||||||||| ||    
  auc    ucuuuc  ccguu   caaccguguugac aa   c
cc   -ugu      ua     auc             c  agu 


mirna_id: xtr-mir-33a
hairpin:
     G          UU        ug gaua 
cugug UGCAUUGUAG  GCAUUGca  u    u
||||| ||||||||||  ||||||||  |     
gacac acgugacguc  uguaacgu  g    c
     a          cg        gu gcga 


mirna_id: xtr-mir-33b
hairpin:
  c  G       UU UU         ---   ac 
cc ug UGCAUUG  G  GCAUUGcau   guc  c
|| || |||||||  |  |||||||||   |||   
gg au acgugac  c  uguaacgug   cag  u
  u  g       uu uu         uug   gu 


mirna_id: xtr-mir-34b-3
hairpin:
u   g      - A  C   G       C       --   aa 
 guu gguuuu C GG AGU UAGUUAG UGAUUGu  guu  c
 ||| |||||| | || ||| ||||||| |||||||  |||  a
 caa ucaaaa g cc uca aucgauc acuaacg  cag  u
a   a      c a  a   a       -       uu   aa 


mirna_id: xtr-mir-92a-1
hairpin:
cu     u            u   u           cu 
  uucug auagguugggau ggu gcaaugcugua  a
  ||||| |||||||||||| ||| |||||||||||  u
  aggau uGUCCGGCCCUG UCA CGUUAUgaugu  u
gu     u            U   -           au 


mirna_id: xtr-mir-100
hairpin:
--    c    A       G UC   A      cu ug 
  guug caua ACCCGUA A  CGA CUUGUG  g  c
  |||| |||| ||||||| |  ||| ||||||  |  c
  cggc gugu ugggcgu u  gcu gaacac  c  c
uu    u    c       g ga   c      -u uc 


mirna_id: xtr-mir-101a-1
hairpin:
gc   -a  ug  c                    cg     gugua 
  gug  ac  uc uuuuucgguuaucaugguac  gugcu     u
  |||  ||  || ||||||||||||||||||||  |||||      
  uac  ug  gg aaGAAGUCAAUAGUGUCAUG  CAUgg     a
-c   cg  gu  u                    -A     aaagu 


mirna_id: xtr-mir-103-2
hairpin:
-      g      --   u  u           c   ua   u 
 cucugu cuuuca  gcu cu uacagugcugc uug  gca c
 |||||| ||||||  ||| || ||||||||||| |||  |||  
 gagacg ggaAGU  CGG GA AUGUUACGACG Aac  ugu u
a      a      AU   -  C           -   --   a 


mirna_id: xtr-mir-124
hairpin:
ua  u    g     cc        a   ga        uaau 
  ag cucu acucu  guguucac gcg  ccuugauu    g
  || |||| |||||  |||||||| |||  ||||||||    u
  uc gagg ugaga  CGUAAGUG CGC  GGAAUUaa    c
ca  c    -     AC        G   AC        caua 


mirna_id: xtr-mir-125a
hairpin:
--- UC   G   C     A       g aag 
   g  CCU AGA CCUUA CCUGUGa g   a
   |  ||| ||| ||||| ||||||| |    
   c  gga ucu ggagu ggacacu u   c
ggu ga   g   u     -       g aua 


mirna_id: xtr-mir-128-1
hairpin:
u   c        cc   c    ag      cu      gu 
 gag ggcuggaa  ggg ccgg  cgcugu  gagagg  u
 ||| ||||||||  ||| ||||  ||||||  ||||||  u
 uuc cugacuUU  CUC GGCC  GUGACA  CUcuuu  a
c   u        UU   U    AA      --      ga 


mirna_id: xtr-mir-135-2
hairpin:
-c      c  a               AU          uugcu 
  ccccug ug gguaUAUGGCUUUUU  UCCUAUGUGA     u
  |||||| || |||||||||||||||  ||||||||||     u
  ggggac ac ucguguaccgaaaga  gggauacacu     c
ca      -  g               -c          uaauc 


mirna_id: xtr-mir-137-1
hairpin:
-   -cugug           ug   g           ug a     -  g 
 gcu      gcucucuucgg  acg guauucuuggg  g uaaua cg a
 |||      |||||||||||  ||| |||||||||||  | ||||| || u
 cga      ugagaggaguu  UGC CAUAAGAAUUC  U AUugu gc u
a   cuucua           GA   G           GU -     u  a 


mirna_id: xtr-mir-143
hairpin:
ug      ag   a  g         g      u  -   g 
  ucuccc  ccc ag ugcagugcu caucuc gg uca u
  ||||||  ||| || ||||||||| |||||| || |||  
  aggggg  ggG UC AUGUCACGA GUAGAG cu agu u
ua      aa   C  G         A      U  g   g 


mirna_id: xtr-mir-144
hairpin:
uu   g        a         -a    gu 
  ugg auaucauc uauacugua  guuu  u
  ||| |||||||| |||||||||  ||||   
  AUC UGUAGUAG AUAUGACAU  caga  u
--   A        -         ca    au 


mirna_id: xtr-mir-145
hairpin:
a     u        UC    U  C            Ugggu 
 ccuau ccucaagG  CAGU UU CCAGGAAUCCCU     g
 ||||| ||||||||  |||| || ||||||||||||     c
 ggaug gggguucu  guca aa gguccuuagggg     u
c     u        -u    u  a            uggug 


mirna_id: xtr-mir-153-2
hairpin:
a      g      -             gu       -a  aa 
 gcaguu ccagug ucauuuuugugac  ugcagcu  gu  u
 |||||| |||||| |||||||||||||  |||||||  ||  a
 ugucaa gguuau AGUGAAAACACUG  ACGUUga  cg  u
-      a      u             AU       cc  ag 


mirna_id: xtr-mir-191
hairpin:
        c    aC     AA      AA       -u   g 
ggcgguag ucug  AACGG  UCCCAA  GCAGCUg  ugu a
|||||||| ||||  |||||  ||||||  |||||||  |||  
ccguuauc aggc  uugcc  aggguu  cgucgac  gua a
        u    ac     -c      ga       uu   a 


mirna_id: xtr-mir-196a
hairpin:
uu  -uau c       cu      U          A        G a   cuu 
  ug    c agcugau  gugguu AGGUAGUUUC UGUUGUUG g uug   u
  ||    | |||||||  |||||| |||||||||| |||||||| | |||    
  ac    g uugacug  cauuaa uccgucaaag acaacggc c aau   u
cu  uucu c       --      u          a        g -   ucu 


mirna_id: xtr-mir-196b
hairpin:
ag      -       U          A      U   cauuc 
  ccgcug ugugguu AGGUAGUUUU UGUUGU GGg     a
  |||||| ||||||| |||||||||| |||||| |||     c
  ggugac acauuaa uccgucaaag acaaca cuc     c
-g      u       u          a      u   ucuuu 


mirna_id: xtr-mir-199b
hairpin:
aagaucccgagaggu g       c   ccC       UC       G      uu  ac 
               g guggucc guu   CCAGUGU  AGACUAC UGUUCg  gg  a
               | ||||||| |||   |||||||  ||||||| ||||||  ||   
               c uaccggg caa   ggucaca  ucugaug acaagu  cc  g
---------aacugg g       u   auu       ca       -      --  aa 


mirna_id: xtr-mir-200a
hairpin:
u  -  -    a        -             c    uuuauu 
 gg uc cucu uggacauc uuacuagacagug ugga      u
 || || |||| |||||||| ||||||||||||| ||||       
 cc ag gaga auuUGUAG AAUGGUCUGUCAC AUcu      u
a  g  u    a        C             A    uuucua 


mirna_id: xtr-mir-200b
hairpin:
-c  u        ugc    -    ug     c      uuuug 
  ug ggcgcuau   cauc uuac  ggcag auugga     u
  || ||||||||   |||| ||||  ||||| ||||||     c
  ac ccgcggua   GUAG AAUG  CCGUC UAAUcu     u
ac  c        uUA    U    GU     A      uugua 


mirna_id: xtr-mir-203
hairpin:
c    -c           u    g    a     c  u 
 cugg  cgagugguucu aaca uuca caguu uc a
 ||||  ||||||||||| |||| |||| ||||| ||  
 ggcc  GUUCACCAGGA UUGU AAGU Guuaa ag u
-    ua           U    A    -     -  c 


mirna_id: xtr-mir-204-2
hairpin:
au     cug     U          A     U    gagaau 
  gugac   ugggc UCCCUUUGUC UCCUA GCCU      a
  |||||   ||||| |||||||||| ||||| ||||      u
  uacug   acuug agggaaacgg agggu cggg      a
ac     uug     c          a     -    ggaagu 


mirna_id: xtr-mir-204-1
hairpin:
-u     acuuc      gugaccca     U         CA    A     gagaa 
  agagg     gacauu        ugggc UCCCUUUGU  UCCU UGCCU     u
  |||||     ||||||        ||||| |||||||||  |||| |||||     g
  ucucc     uuguag        acucg agggaaacg  aggg acgga     c
gu     ----a      --------     u         ac    -     gaggu 


mirna_id: xtr-mir-205a
hairpin:
cc     u   gc   C           C        ucuca 
  acgug ccu  ugU CUUCAUUCCAC GGAGUCUG     u
  ||||| |||  ||| ||||||||||| ||||||||     a
  uguac gga  aca gaagugaggug cuuuagac     c
ga     -   ga   c           a        uaaua 


mirna_id: xtr-mir-208
hairpin:
uc   uc              u      ga     uuuu u 
  cuu  aacaggcaagcuuu ugcuug  uuaug    c g
  |||  |||||||||||||| ||||||  |||||    |  
  gaa  uuguuUGUUCGAAA ACGAGC  AAUAu    g u
--   ga              U      AG     -guu u 


mirna_id: xtr-mir-212
hairpin:
ug     u  a    -ca  u     c       c       gaaa      
  gucau gc ucgg   cc uggcu uagacug uuacugu    cugug 
  ||||| || ||||   || ||||| ||||||| |||||||    |||| c
  cagua ug aguc   GG ACUGA AUCUGAC AAUgaca    gauau 
--     -  c    aUC  U     C       -       --ag      


mirna_id: xtr-mir-221
hairpin:
ac   gac  ug     -c   ug   u         aaaa    -   u 
  cca   uu  gcgug  acc  gca acaauguag    cugu guu g
  |||   ||  |||||  |||  ||| |||||||||    |||| ||| c
  ggu   aa  cguaC  UGG  CGU UGUUACAUC    GAca cga a
-a   ---  gu     UU   GU   C         ----    a   a 


mirna_id: xtr-mir-338-2
hairpin:
      u   -       c ucu    gugc 
caacaa auc cugaugc g   gagu    g
|||||| ||| ||||||| |   ||||     
GUUGUU UAG GACUACG C   CUcg    g
      U   U       A ---    aaag 


mirna_id: xtr-mir-363
hairpin:
u     u   cg         CA  A         a   aguu 
 uuugu guu  CGGGUGGAU  CG UGCAAUUUu uuu    u
 ||||| |||  |||||||||  || ||||||||| |||     
 agacg caa  GUCUACCUA  GC ACGUUAAaa gag    g
a     c   aU         UG  -         a   gaug 


mirna_id: xtr-mir-429
hairpin:
u   u  -         u -          ag       cu  u 
 gcc gu ugaccaaug c uuaccagaca  guuagau  ag u
 ||| || ||||||||| | ||||||||||  |||||||  || a
 cgg ua acugguUGC G AAUGGUCUGU  UAAUcug  uc c
-   u  c         C U          CA       -c  u 


mirna_id: xtr-mir-449a
hairpin:
cu    uu      aA     -     U      UG  u gaaaa 
  gugu  agaagg  GGCAG UGUAA GUUAGC  GU g     u
  ||||  ||||||  ||||| ||||| ||||||  || |      
  uaca  ucuucC  CCGUC ACAUU CAAUUG  ca c     a
--    uu      CC     C     -      GU  - agacg 


mirna_id: xtr-mir-451
hairpin:
   ug     gA    G            A 
gag  gcaau  AACC UUACCAUUACUG G
|||  |||||  |||| ||||||||||||  
cuc  cguug  uugg aaugguaaugau U
   gu     uc    g            U 


mirna_id: xtr-mir-18b
hairpin:
c         --   U    C   U     UA   a aua 
 cuuguguUA  AGG GCAU UAG GCAGU  Gug c   g
 |||||||||  ||| |||| ||| |||||  ||| |    
 ggacacggu  ucc cgua auc cguca  uac g   u
-         uu   u    a   c     uc   - aug 


mirna_id: xtr-mir-19b-1
hairpin:
  uc u        a  -   -      u    ugac 
gc  c gucaguuu gc ugg uuugca cagc    u
||  | |||||||| || ||| |||||| ||||     
cg  g cAGUCAAA CG ACC AAACGU GUcg    a
  gu u        A  U   U      -    uguu 


mirna_id: xtr-mir-20b
hairpin:
-     -ucCA           G     G   uugua 
 gcagu     AAGUGCUCAUA UGCAG UAG     u
 |||||     ||||||||||| ||||| |||     u
 cguca     uucacggguau auguc auc     g
u     ugaca           a     -   uugua 


mirna_id: xtr-mir-133a
hairpin:
      uu g   a       aa  u  a        accuc 
caaugc  u cua agcuggu  aa gg accaaauc     u
||||||  | ||| |||||||  || || ||||||||      
guuacg  a gaU UCGACCA  UU CC UGGUUuag     u
      uu g   G       AC  C  C        guaac 


mirna_id: mmu-mir-652
hairpin:
aggaaca   a                  GAGGG           ca  g 
       gcu uguacugcaCAACCCUAG     GGUGCCAUUCa  ua a
       ||| ||||||||||||||||||     |||||||||||  || g
       cga augugacGUGUUGGGAUC     CCGCGGUAAgu  au u
-cacauc   c                  ----A           ua  a 


mirna_id: tni-mir-10d
hairpin:
    ----g   -   -gc   u        c  A    G       G   G    UG   c 
gccg     uga ggu   ucg cgucuaua aU CCCU UAGAACC AAU UGUG  cag u
||||     ||| |||   ||| |||||||| || |||| ||||||| ||| ||||  ||| g
cggc     gcu cua   agu gcggguau ug gggg aucuugg uua acac  guu a
    aagua   a   aua   c        c  a    -       g   g    ua   c 


mirna_id: fru-mir-10d
hairpin:
c      gg  ga            a  A    G       G   G    UG   c 
 cgguga  ug  ucgucgucuaua aU CCCU UAGAACC AAU UGUG  cag u
 ||||||  ||  |||||||||||| || |||| ||||||| ||| ||||  ||| g
 gucacu  au  aguagcggguau ug gggg aucuugg uua acac  guu a
a      -a  -a            c  a    -       g   g    ua   c 


mirna_id: bmo-let-7
hairpin:
g  acug           uU   G                a  g aa  ca 
 gu    ccgucggcuug  GAG UAGUAGGUUGUAUAGU cg a  ua  a
 ||    |||||||||||  ||| |||||||||||||||| || |  ||  c
 ca    ggcagucgagC  UUC AUCGUCCGAUAUGUCa gc u  au  a
a  guaa           CU   A                -  g gg  ac 


mirna_id: bmo-mir-1a
hairpin:
a    u     a            C    UUC     gucau 
 gccu gcgca guuCCGUGCUUC UUAC   CCAUa     u
 |||| ||||| |||||||||||| ||||   |||||     g
 cggg cgcgu cGAGGUAUGAAG AAUG   GGUau     u
g    -     -            A    UAA     acuaa 


mirna_id: bmo-mir-7
hairpin:
c   -    g     U  A   C         --    -   uu 
 gcu ucgu uugua GG AGA UAGUGAUUU  UGUU GUu  u
 ||| |||| ||||| || ||| |||||||||  |||| |||   
 cga agcg aacAU CC UCU AUCACUAAA  Acaa cag  g
a   c    a     -  G   A         GA    u   uu 


mirna_id: bmo-mir-8
hairpin:
c    ---c     aa   uu  -      -   G     C       uccug 
 acga    ggagu  cgg  cg CAUCUU ACC GGCAG AUUAGAg     u
 ||||    |||||  |||  || |||||| ||| ||||| |||||||     c
 ugcu    ccucg  gcc  gC GUAGAA UGG CUGUC UAAUcuu     u
c    ugca     -c   -u  U      A   A     A       uuaua 


mirna_id: bmo-mir-9a
hairpin:
a      u   uaa   U       U        G     -  au 
 guagau ggu   uua CUUUGGU AUCUAGCU UAUGA gu  u
 |||||| |||   ||| ||||||| |||||||| ||||| ||  a
 caucug ccg   aAU GAGGCCA UGGAUCGA AUAcu ca  c
a      -   -ug   U       U        A     g  gu 


mirna_id: bmo-mir-10
hairpin:
a    c      cu   -  G    U           ugaa 
 gugc cuacau  ACC CU UAGA CCGAAUUUGUu    g
 |||| ||||||  ||| || |||| |||||||||||    u
 cacg ggugug  UGG GA AUCU GGCUUAAACag    g
g    u      UU   A  G    U           cgga 


mirna_id: bmo-mir-14
hairpin:
u       ug   C           UC   GA     uu 
 ugucauu  ugu GGGGAGAGAAA  GAC  GGCUg  u
 |||||||  ||| |||||||||||  |||  |||||  u
 acaguga  auA CCUCUCUCUUU  CUG  CUgau  a
u       gu   U           UU   -A     uu 


mirna_id: bmo-mir-34
hairpin:
a  a c     a ac    uU        G     C       --g   g 
 ga u agggu g  cgcg  GGCAGUGU GUUAG UGGUUGu   uau g
 || | ||||| |  ||||  |||||||| ||||| |||||||   |||  
 cu a uccca c  gcgU  UCGUCACA CAAUC ACCGAca   gua a
a  a a     - gu    CC        G     -       aca   a 


mirna_id: bmo-mir-124
hairpin:
c     ac   cuc           c ga   g     uauau 
 agucc  cuc   gcguucacugc g  gcc uuaug     u
 |||||  |||   ||||||||||| |  ||| |||||     u
 ucagg  gaG   CGUAAGUGGCG C  CGG AAUac     a
c     -c   AAC           - -A   -     uuaaa 


mirna_id: bmo-mir-263b
hairpin:
-a   g      uucCUU    C       A     a  a  -  u 
  gcc acgcug      GGCA UGGGAGA UUCAC gg gu ug a
  ||| ||||||      |||| ||||||| ||||| || || || a
  ugg ugugac      CCGU GCCCUUU AAGUG cc ca ac u
ac   -      ucGAUU    A       -     -  -  u  u 


mirna_id: bmo-mir-263a
hairpin:
a   a   aa    a  cA   G     GA   AU       uucagu 
 ucg ucc  gcac gg  AUG CACUG  AGA  UCACggg      u
 ||| |||  |||| ||  ||| |||||  |||  |||||||      u
 agc agg  cgug uC  UAC GUGAU  UCU  AGUGCcc      a
c   -   -a    g  AC   G     UC   --       uuauau 


mirna_id: bmo-mir-275
hairpin:
c   c  ca               - C  CG  AG    gucc 
 agg gg  gcgccgCGCGCUACU C GG  CC  GACU    u
 ||| ||  ||||||||||||||| | ||  ||  ||||     
 ucc cc  ugugGCGCGCGAUGA G CC  GG  CUga    c
a   u  uc               A U  AU  -A    gcca 


mirna_id: bmo-mir-276
hairpin:
c      uua   cu    A     AG         -  aug 
 ugguaa   cca  AGCG GGUAU  AGUUCCUAC Gu   c
 ||||||   |||  |||| |||||  ||||||||| ||    
 accguu   ggu  UCGU CCAUA  UCAAGGAUg ca   u
a      -ug   UC    G     CU         u  caa 


mirna_id: bmo-mir-277
hairpin:
-   -au             -          -            aagag cc     guu    u 
 uug   uacgccucggggu UCGUGCCAGG AGUGCGUUUGCa     g  gacau   ugcg u
 |||   ||||||||||||| |||||||||| ||||||||||||     |  |||||   ||||  
 aac   gugcggggcccuA AGCAUGGUCU UCACGUAAAUgu     c  uugua   acgu a
c   gau             C          A            ---ca aa     ---    u 


mirna_id: bmo-mir-279a
hairpin:
a  u        uuc        ga        g    uuua 
 cg caauuucu   gaugagug  gguuuagu caug    u
 || ||||||||   ||||||||  |||||||| ||||    u
 gc guugaagg   cUACUCAC  CUAGAUCA GUac    u
a  -        uac        AC        -    caca 


mirna_id: bmo-mir-282
hairpin:
c     uuu   C        CCUU    U      Uuuc  u 
 gggac   gAC UAGCCUCU    GGCU UGUCUG    gu a
 |||||   ||| ||||||||    |||| ||||||    || g
 cccug   uuG AUUGGAGA    CCGA ACAgac    cg u
u     -uu   C        UAGU    U      ---u  a 


mirna_id: bmo-mir-283
hairpin:
a    u  cc    AA             AU      c  u 
 acgu uc  gacU  AUAUCAGCUGGUA  UCUggg uu a
 |||| ||  ||||  |||||||||||||  |||||| ||  
 ugca ag  uuGA  UAUGGUCGACUAU  GGACcc aa u
a    u  ua    CA             -C      u  u 


mirna_id: bmo-mir-305
hairpin:
c        -    cccAU         U       U    u   c 
 gaccgccg cacg     UGUACUUCA CAGGUGC CUGg gau a
 |||||||| ||||     ||||||||| ||||||| |||| |||  
 uuggcggc gugc     ACAUGAGGU GUUCGCG Gacc uug u
a        u    caUUC         U       -    -   a 


mirna_id: bmo-mir-307
hairpin:
a      ucc    uA         CCU  G       u  ---   c 
 gcucgu   cggu  CUCACUCAA   GG UGUGAUG gu   gca u
 ||||||   ||||  |||||||||   || ||||||| ||   ||| c
 cgagua   gcua  GAGUGAGUU   CC ACACUac cg   cgu g
c      ucu    gc         CCU  A       c  gcu   u 


mirna_id: kshv-mir-K12-12
hairpin:
    -  c      cg            C    A      U   cauua 
gaug gc ggcacg  gugucAACCAGG CACC UUCCUC CCG     a
|||| || ||||||  |||||||||||| |||| |||||| |||      
cuac cg ccgugu  cacAGUUGGUCC GUGG AGGGGG ggc     a
    g  -      aa            C    G      U   ucacg 


mirna_id: ebv-mir-BART15
hairpin:
u   c g  ugg         u      c   ag    u 
 gug c cu   agggaaaca gaccac uga  ucug u
 ||| | ||   ||||||||| |||||| |||  |||| a
 cac g ga   UUCCUUUGU UUGGUG ACU  Ggac a
a   a a  uAG         U      -   --    c 


mirna_id: ebv-mir-BART16
hairpin:
   -cuu    g     a  UUA      GU     U   C     uuua 
agg    ucag ugugg au   GAUAGA  GGGUG GUG UCUug    a
|||    |||| ||||| ||   ||||||  ||||| ||| |||||    u
ucc    aguu acacc ua   cuaucu  cccac cac agaac    u
   aaau    a     c  uac      --     -   u     caca 


mirna_id: ebv-mir-BART17
hairpin:
    aac   -a    gca  -     A      -            uuauu 
guug   agg  ugug   cc cUAAG GGACGC AGGCAUACAAGg     a
||||   |||  ||||   || ||||| |||||| ||||||||||||      
cgau   ucc  acgc   gg GAUUC CCUGUG UCCGUAUGUucc     c
    gga   gg    -ag  U     C      G            ugacc 


mirna_id: ebv-mir-BART18
hairpin:
    u  c     --aaga      uc    cU -       C      U      u  u 
uugu gc guuga      cgggug  cugg  C AAGUUCG ACUUCC AUACAg gu a
|||| || |||||      ||||||  ||||  | ||||||| |||||| |||||| ||  
agcg cg cagcu      gcucau  gacc  G UUCGGGU UGAAGG UAUguu cg a
    u  u     guaaua      gu    CU C       U      C      c  a 


mirna_id: ebv-mir-BART19
hairpin:
  a    u       caA       -C       U      gg ua 
gu uccg guccuga   CAUUCCC  GCAAACA GACAUG  u  a
|| |||| |||||||   |||||||  ||||||| ||||||  |   
cg aggu cgggauu   GUAAGGG  CGUUUGU UUguac  a  u
  a    c       cUC       UU       U      aa uu 


mirna_id: ebv-mir-BART20
hairpin:
    -  --cgu   -   u  u         -A         U  -ug    
uaca gg     agg gcc au gUAGCAGGC  UGUCUUCAU CC   cgu 
|||| ||     ||| ||| || |||||||||  ||||||||| ||   || a
augu cc     ucc cgg ua CAUUGUCCG  ACGGAAGUA gg   gcc 
    a  uuuuu   a   u  C         AC         C  uaa    


mirna_id: gga-mir-21
hairpin:
-----u      ucc                A     A     A    ugg 
      guacca   ugucggaUAGCUUAUC GACUG UGUUG cugu   a
      ||||||   |||||||||||||||| ||||| ||||| ||||    
      uauggu   acagucugucggaugg cugac acaac ggua   u
acucuc      uuu                -     a     -    cuc 


mirna_id: gga-mir-451
hairpin:
acaca      g   g A                GA 
     uggcug cag g AACCGUUACCAUUACU  G
     |||||| ||| | ||||||||||||||||   
     accgac guc u uuggcaaugguaauga  U
-----      a   g c                UU 


mirna_id: gga-mir-144
hairpin:
ccc  c    u   cu g        a         --ag   a 
   gc gccc ggg  g auaucauc uauacugua    uuc c
   || |||| |||  | |||||||| |||||||||    ||| u
   cg cggg ccc  C UGUAGUAG AUAUGACAU    gag a
---  u    u   CU A        -         Caca   u 


mirna_id: gga-mir-456
hairpin:
auuuaagcu  u  --g gu   c        g   g     uc       acau ug    c 
         gc gu   u  gug guguguga cag caucu  ucagccu    g  gauu c
         || ||   |  ||| |||||||| ||| |||||  |||||||    |  ||||  
         cg ca   g  uac uacguACU GUU GUAGA  GGUCGGA    C  cuaa u
---------  u  aua uc   u        -   G     UU       ---- gu    a 


mirna_id: gga-mir-460a
hairpin:
----c     -a     caC UG       CA A        guua 
     ugacu  uauag   C  CAUUGUA  C CUGUGUGu    a
     |||||  |||||   |  |||||||  | ||||||||    c
     acuga  auguc   g  guaacau  g gacacgua    u
cacuc     ag     uua gu       ac c        aagg 


mirna_id: gga-mir-757
hairpin:
-------ccc    acuu   c  A    U     U   A   uc 
          ggug    ucu GC GAGC GCAGA GGG UUC  g
          ||||    ||| || |||| ||||| ||| |||  c
          ucac    agg ug cucg cgucu cuc gag  u
augucgugac    --au   c  a    u     -   -   ua 


mirna_id: mmu-mir-490
hairpin:
uggaaaguucauugu      C      --         G   cac  uua 
               ucgaca CAUGGA  UCUCCAGGU GGU   gu   g
               |||||| ||||||  ||||||||| |||   ||    
               aguuGU GUACCU  GGAGGUCCA Cca   ca   a
---------------      C      CA         A   ---  uau 


mirna_id: mmu-mir-676
hairpin:
cuuu    --        gA   U             UU   gaauu 
    gccu  gaaugcau  CUC ACAACCUUAGGAC  GCa     a
    ||||  ||||||||  ||| |||||||||||||  |||      
    cggg  uuugcgug  GAG UGUUGGAGUCCUG  Cgu     a
----    uc        UC   U             -C   aagga 


mirna_id: mmu-mir-615
hairpin:
uc    -    c          UC     U        Cu    g ug 
  ggga gggg gggagGGGGG  CCCGG GCUCGGAU  cgag g  c
  |||| |||| ||||||||||  ||||| ||||||||  |||| |  u
  cccu cccc ccUUCUCCCU  GGGUC CGAGCCUg  gcuu u  u
--    a    -          CU     -        --    g ua 


mirna_id: bta-mir-106a
hairpin:
  u   cc      -        A  G     G   c  u 
cc ugg  auguAA AAGUGCUU CA UGCAG UAg uu u
|| |||  |||||| |||||||| || ||||| ||| || u
gg acc  uacauu uucacgaa gu acguc auc ag g
  u   au      c        c  a     -   u  a 


mirna_id: bta-mir-107
hairpin:
c   c      --c    u  u           c   u   a 
 ucu ugcuuu   agcu cu uacaguguugc uug ggc u
 ||| ||||||   |||| || ||||||||||| ||| ||| g
 aga acgaaa   UCGG GA AUGUUACGACG Aac uug g
-   c      CUA    -  C           -   -   a 


mirna_id: bta-mir-10a
hairpin:
----gauc   --c    uu        A    G     C          uaaggaa 
        ugu   uguc  cuguauaU CCCU UAGAU CGAAUUUGUG       u
        |||   ||||  |||||||| |||| ||||| ||||||||||        
        aca   acag  gauguaua gggg aucua gcuuaaacac       u
cucgccuc   aau    uu        a    -     u          uaguguu 


mirna_id: bta-mir-127
hairpin:
-------u   ca   ucu      ugcug         g  c      --  a 
        gau  cug   ccagcc     aagcucaga gg ucugau  uc g
        |||  |||   ||||||     ||||||||| || ||||||  || a
        cug  ggc   ggUCGG     UUCGAGUCU CC AGGCUa  ag a
cuacuccu   aa   --u      -----         G  U      cu  a 


mirna_id: bta-mir-139
hairpin:
gug       -   U  A            g gg 
   uacUCUA CAG GC CGUGUCUCCAGU u  c
   ||||||| ||| || |||||||||||| |  u
   augaggu guc cg gcgcagaggucg a  c
-ca       u   c  -            g gg 


mirna_id: bta-mir-140
hairpin:
--uc    u        -  a             a       uu   uc 
    ucuc guguccug cc gugguuuuacccu ugguagg  acg  a
    |||| |||||||| || ||||||||||||| |||||||  |||   
    gggg cauaggac GG CACCAAGAUGGGA ACCAUcu  ugu  u
ccac    c        A  -             C       --   cg 


mirna_id: bta-mir-142
hairpin:
g        g   c           A         uaa ag a 
 acagugca uca cCAUAAAGUAG AAGCACUAC   c  c c
 |||||||| ||| ||||||||||| |||||||||   |  |  
 ugucaugu aGU GGUAUUUCAUC UUUGUGAug   g  g u
g        g   A           C         -ug ga g 


mirna_id: bta-mir-15b
hairpin:
u    --a       gua   U       C  C      UA   a  ac 
 ugag   ccuuaaa   cug AGCAGCA AU AUGGUU  CAu cu  a
 ||||   |||||||   ||| ||||||| || ||||||  ||| ||  g
 acuu   ggaauuu   gau ucgucgu ua uacuaa  gua ga  u
u    aaa       aaa   c       u  u      gc   -  ac 


mirna_id: bta-mir-181b-2
hairpin:
cuga   -     cucA          CU           u  cu 
    ugg cugca    ACAUUCAUUG  GUCGGUGGGUU ga  u
    ||| |||||    ||||||||||  ||||||||||| ||  u
    acc ggcgu    uguaaguaac  uagucacucaa cu  g
acaa   a     caaa          --           -  aa 


mirna_id: bta-mir-193a
hairpin:
u   a      ag     U     CG   G  A    ggu 
 ggg gcugag  cUGGG CUUUG  GGC AG UGAa   g
 ||| ||||||  ||||| |||||  ||| || ||||    
 ccc cggcuc  GACCC GAAAC  CCG UC Acuu   u
c   -      cU     U     AU   G  A    ggc 


mirna_id: bta-mir-20b
hairpin:
     -CA           G     G   uuuu     
aguac   AAGUGCUCACA UGCAG UAg    ggca 
|||||   ||||||||||| ||||| |||    ||| g
ucaug   uucacgggugu auguc auc    ucgc 
     acc           g     -   ----     


mirna_id: bta-mir-215
hairpin:
u        aaA  A     -   U         -  gug 
 guacagga   UG CCUAU GAA UGACAGACA ac   a
 ||||||||   || ||||| ||| ||||||||| ||    
 uaugucuu   ac ggaug cuu acugucugu ug   c
-        gua  c     u   u         c  aau 


mirna_id: bta-mir-218-2
hairpin:
uUU         CU        Gguggaacga  g 
   GUGCUUGAU  AACCAUGU          ug a
   |||||||||  ||||||||          ||  
   cacgaacug  uugguaca          gc a
--c         uc        --------ag  a 


mirna_id: bta-mir-30e
hairpin:
g        uu  ua            UU           g aag    
 ggcagucu  gc  cUGUAAACAUCC  GACUGGAAGCU u   gcg 
 ||||||||  ||  ||||||||||||  ||||||||||| |   || u
 ccgucgga  cg  gacauuuguagg  cugacuuucga g   cgu 
a        --  gc            --           g -aa    


mirna_id: bta-mir-345
hairpin:
---acc             G U          C   U   ug g u 
      caaacccaggucu C GACUCCUAGU CAG GCU  u a g
      ||||||||||||| | |||||||||| ||| |||  | |  
      guuuggguccgGA G CUGGGGAUCA GUC cgg  g u g
cuauaa             G U          A   C   gu g c 


mirna_id: bta-mir-369
hairpin:
-   ag               UA      Cuuua 
 uga  ggagAUCGACCGUGU  UAUUCG     u
 |||  |||||||||||||||  ||||||      
 acu  UUUCUAGUUGGUACA  AUAAgc     u
g   cu               UA      uucag 


mirna_id: bta-mir-380
hairpin:
      GUU       GA       - ugu 
aagaUG   GACCAUA  ACAUGCG C   c
||||||   |||||||  ||||||| |   u
uUCUGC   CUGGUGU  UGUAUgc g   c
      -AC       AA       u uau 


mirna_id: bta-mir-487a
hairpin:
      u     g   uua      c    -    cu  a 
gguacu gaaga ugg   ucccug ugug uucg  gu u
|||||| ||||| |||   |||||| |||| ||||  ||  
cuauga uuuuU ACC   AGGGAC AUAC AAgc  ua u
      c     G   UAC      -    U    ag  u 


mirna_id: bta-mir-545
hairpin:
cccag    ------g   a  c      - U            AUUG     -a  aa 
     ccug       cac uu guaggc c CAGUAAAUGUUU    GAUGa  ua  u
     ||||       ||| || |||||| | ||||||||||||    |||||  ||   
     ggac       gug aa cguccG G GUUAUUUACAAA    CUAcu  gu  g
-----    accucua   c  u      U U            -CAA     cg  aa 


mirna_id: bta-mir-92a-2
hairpin:
-------u    g     uu  u   c     -      
        gggu gggau  gu gca ugcuu guguu 
        |||| |||||  || ||| ||||| |||| a
        UCCG CCCUG  CA CGU AUgaa uauau 
agaaggUG    G     UU  -   U     a      


mirna_id: bta-mir-98
hairpin:
a   cuc    -     ug   U                 U    ---------      aggg 
 gga   ugcu caugc  ggg GAGGUAGUAAGUUGUAU GUUg         uggggu    a
 |||   |||| |||||  ||| ||||||||||||||||| ||||         ||||||    u
 cuu   acga gugug  ccc uuucaucauucaacaua caau         accccg    u
a   -ac    u     gu   -                 u    agaaguuua      gauu 


mirna_id: bta-let-7d
hairpin:
       A              C      u  -------      g 
ccuagga GAGGUAGUAGGUUG AUAGUU uc       gggcag g
||||||| |||||||||||||| |||||| ||       |||||| a
ggauucu uuccgucguccagc uaucaa gg       cccguu u
       -              a      u  aggaaca      u 


mirna_id: bta-mir-124a-1
hairpin:
a      uc   cc        a   ga        uaaau 
 ggccuc  ucu  guguucac gcg  ccuugauu     g
 ||||||  |||  |||||||| |||  ||||||||     u
 ucgggg  aGA  CGUAAGUG CGC  GGAAUuaa     c
g      ua   AC        G   AC        cauac 


mirna_id: bta-mir-132
hairpin:
c   cccc    -  c a    a         uuc          -g     
 cgc    gcgu cu c gggc accguggcu   gauuguuacu  uggg 
 |||    |||| || | |||| |||||||||   ||||||||||  ||| a
 gcg    cgca ga g cccG UGGUACCGA   CUGACAAUgg  gcca 
c   cacc    c  c c    C         CAU          ag     


mirna_id: bta-mir-138-2
hairpin:
- u   u  AG             UCA     -ac   c  cg 
 g ugc gc  CUGGUGUUGUGAA   GGCCG   gag ag  c
 | ||| ||  |||||||||||||   |||||   ||| ||   
 c acg ug  gaccacagcacuu   ucggc   uuc uc  a
a u   u  -g             -ua     cca   -  cu 


mirna_id: bta-mir-148b
hairpin:
---uu   a       ug         u  a    ca    gugg u 
     agc uuugagg  aaguucugu au cacu  ggcu    c c
     ||| |||||||  ||||||||| || ||||  ||||    | u
     ucg aagcucU  UUCAAGACA UA GUGA  CUga    g c
aucuu   a       GU         C  C    --    --aa u 


mirna_id: bta-mir-181c
hairpin:
----uug   a  g       gAA        CU       A     ggca 
       cca gg uuugggg   CAUUCAAC  GUCGGUG GUUUg    g
       ||| || |||||||   ||||||||  ||||||| |||||    c
       ggu cc gagcccc   gugaguug  cagcuac caaac    u
ccgucaa   -  g       -ag        -c       -     ggac 


mirna_id: bta-mir-186
hairpin:
u     u                 U     U      ucu  uu 
 gcuua aacuuucCAAAGAAUUC CCUUU GGGCUu   ga  u
 ||||| ||||||||||||||||| ||||| ||||||   ||   
 cgagu uugaaggguuuuuuaag ggaaa cccgaa   uu  u
u     -                 u     -      --u  ua 


mirna_id: bta-mir-191
hairpin:
-   u   c      C          C  AA       uu  -  c 
 ggc gga agcggg AACGGAAUCC AA  GCAGCUG  gu cu c
 ||| ||| |||||| |||||||||| ||  |||||||  || ||  
 ccg ccu ucgucc uugcuuuagg uu  cgucgac  ua ga a
u   u   c      c          -  cg       cu  c  g 


mirna_id: bta-mir-192
hairpin:
----agacc   u  --   g g  C         -     A       ----u  uc 
         gag gc  aca g cu UGACCUAUG AAUUG CAGCCAG     gc  u
         ||| ||  ||| | || ||||||||| ||||| |||||||     ||   
         cuc cg  ugu u ga acuggauac uuaac gucgguc     ug  u
cgaccguaa   -  cu   a g  c         c     c       ucccc  ug 


mirna_id: bta-mir-199b
hairpin:
----------cc    cu  -     C       U       U    U  ----  a 
            ucca  cc gucua CCAGUGU UAGACUA CUGU Ca    gg c
            ||||  || ||||| ||||||| ||||||| |||| ||    ||  
            gggu  gg cggau gguuaca gucugau gaca gu    cc u
ggcucccagauu    cg  u     u       c       -    u  uaaa  c 


mirna_id: bta-mir-200a
hairpin:
   - c   g        -             c    uuuc     
ggg c ucu uggacauc uuaccggacagug ugga    ucgg 
||| | ||| |||||||| ||||||||||||| ||||    ||| c
ccc g gga acUUGUAG AAUGGUCUGUCAC AUcu    agcu 
   a u   a        C             A    ---c     


mirna_id: bta-mir-200c
hairpin:
----    -      a        u   u   gg 
    cguc uuaccc gcaguguu ggg gcu  u
    |||| |||||| |||||||| ||| |||  u
    GUAG AAUGGG CGUCAUAA cuc uga  g
ggAG    U      C        U   -   gg 


mirna_id: bta-mir-210
hairpin:
--------cc      c    gg     a   cc   -      c  c -     
          uccagg gcag  cagcc cug  cac cgcaca ug g cugc 
          |||||| ||||  ||||| |||  ||| |||||| || | ||| u
          gggucc uguc  GUCGG GAC  GUG GCGUGU Ac c ggcc 
ccagcgcgac      c    uA     C   -A   U      C  c a     


mirna_id: bta-mir-214
hairpin:
ggccu      acgga           u          aca            aacau 
     ggcugg     guugucaugug cugccugucu   cuugcugugcag     c
     ||||||     ||||||||||| ||||||||||   ||||||||||||     c
     ccgacc     caacaguacac GACGGACAGA   GGACGACAuguc     g
----u      -----           U          CAC            cacuc 


mirna_id: bta-mir-22
hairpin:
   u   cc               -     A      u  ccu 
ggc gag  gcaguAGUUCUUCAG UGGCA GCUUUA gu   g
||| |||  ||||||||||||||| ||||| |||||| ||   a
ccg cuc  cguuGUCAAGAAGUU ACCGU CGAAau cg   c
   u   -c               G     -      -  acc 


mirna_id: bta-mir-23a
hairpin:
  c   c     -       g    g      c  c 
gg cgg ugggg uuccugg gaug gauuug ug c
|| ||| ||||| ||||||| |||| |||||| || u
cc gcc ACCUU AGGGACC UUAC CUAaac ac g
  a   a     U       G    A      -  u 


mirna_id: bta-mir-29b-2
hairpin:
         -          c      g  u    uuuucc 
cuucuggaa gcugguuuca auggug cu agau      a
||||||||| |||||||||| |||||| || ||||       
gaggauuUU UGACUAAAGU UACCAC GA Ucua      u
         G          U      -  -    uguuuc 


mirna_id: bta-mir-361
hairpin:
     UU         --U  A    U    auaa 
ggagc  AUCAGAAUC   CC GGGG ACuu    u
|||||  |||||||||   || |||| ||||    u
cuucg  uagucuuag   gg cccc ugaa    u
     uu         ugu  a    c    aaag 


mirna_id: bta-mir-423
hairpin:
-----auaa       u            -AG   G    A     cua 
         aggaagu aggcUGAGGGGC   AGA CGAG CUUUu   u
         ||||||| ||||||||||||   ||| |||| |||||   u
         uccuucg ucUGACUCCCCG   UCU GCUC GAAaa   u
cgcgcccca       u            GAG   G    -     ccu 


mirna_id: bta-mir-425
hairpin:
     c  u    aAU       U  C     U  ----Ag   g 
gaaag gc uugg   GACACGA CA UCCCG UG      ugg c
||||| || ||||   ||||||| || ||||| ||      |||  
cuuuc cg gaCC   CUGUGCU GU AGGGC Ac      acc a
     u  u    CGC       -  A     U  cgaaga   c 


mirna_id: bta-mir-450a-2
hairpin:
caaagaaa     u       UUU     U               aa 
        gaugc aaacuau   UGCGA GUGUUCCUAAUAUgu  u
        ||||| |||||||   ||||| |||||||||||||||  c
        cuaug uuugaua   acguu uacaaggguuaugua  u
-----uaa     u       cuu     u               aa 


mirna_id: bta-mir-455
hairpin:
ucccu   -g     -----          U      A   C   gaa 
     ggc  ugagg     gUAUGUGCCU UGGACU CAU gug   g
     |||  |||||     |||||||||| |||||| ||| |||    
     ccg  acucc     CAUAUACGGG ACCUGA Gua cac   c
---au   ga     guUCA          U      C   c   gac 


mirna_id: bta-mir-93
hairpin:
cug       -CA        -    U    G   u  g u 
   ggggcuc   AAGUGCUG UUCG GCAG UAg gu a c
   |||||||   |||||||| |||| |||| ||| || | a
   ccccgag   uucacgac gagu cguc auc ca u c
---       ccc        c    -    -   -  g c 


mirna_id: bta-let-7g
hairpin:
a   U        A            ugagg    -a  a    a 
 ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
 ||| |||||||| ||||||||||||     ||||  || ||||  
 ccg uuccguca cggacaugucaa     uaga  ac augg c
-   -        c            -----    gg  -    c 


mirna_id: bta-mir-10b
hairpin:
--cag  a     u        A    G     C          u g   c 
     ug cguug cuauauaU CCCU UAGAA CGAAUUUGUG g uau c
     || ||||| |||||||| |||| ||||| |||||||||| | |||  
     ac guagc gguauaua gggg aucuu gcuuagacac u aug a
caaaa  -     u        a    -     a          - g   u 


mirna_id: bta-mir-24-2
hairpin:
cu   cc   cg   -cu        --gaaa     u 
  cug  ucc  ugc   acugagcu      cacag u
  |||  |||  |||   ||||||||      ||||| g
  GAC  AGG  ACG   UGACUCGG      guguu a
-g   -A   --   ACU        Ucacac     u 


mirna_id: bta-mir-30a
hairpin:
----            UC           ---g  ag 
    cUGUAAACAUCC  GACUGGAAGCU    ug  g
    ||||||||||||  |||||||||||    ||   
    gacguuuguagg  cugacuuucgg    ac  c
cguc            --           aaag  gu 


mirna_id: bta-mir-200b
hairpin:
c    -    ug     c      u  ug 
 cauc uuac  ggcag auugga gg  u
 |||| ||||  ||||| |||||| ||  c
 GUAG AAUG  CCGUC UAAUcu cu  u
a    U    GU     A      -  gg 


mirna_id: bta-mir-7-3
hairpin:
agacuggagcgguuguggucuagugcugugUGGAAGACUA       U      c  au 
                                        GUGAUUU GUUGUU ug  g
                                        ||||||| |||||| ||   
                                        cacugaa caacag au  u
-------------------------------------cga       -      u  ca 


mirna_id: bta-let-7a-1
hairpin:
     U   GU                uuagggucacac 
uggga GAG  AGUAGGUUGUAUAGUU            c
||||| |||  ||||||||||||||||            c
auccu uuc  ucaucuaacauaucaa            a
     -   ug                uagagggucacc 


mirna_id: bta-mir-150
hairpin:
------ccuc     u  c  -           AACC          U  g    
          ucucc ca gg cccugUCUCCC    CUUGUACCAG GU ugu 
          ||||| || || |||||||||||    |||||||||| || || c
          agggg gu cc gggacggaggg    ggacaugguc ca acu 
cgacgacccu     -  -  a           gcau          c  g    


mirna_id: bta-mir-342
hairpin:
uggaagc    g     c  g      --ua      gu    g   c gcaa 
       gggu cgagg ga gggugc    ucugug  ugag aca g    a
       |||| ||||| || ||||||    ||||||  |||| ||| |     
       cccg gcucc CU CCCACG    AGACAC  ACUC Ugu c    u
-------    -     U  A      CUAA      --    -   - aaag 


mirna_id: bta-mir-487b
hairpin:
u       ug        uuau      c u     uuuua 
 ugguacu  gagagugg    cccugu c guucg     c
 |||||||  ||||||||    |||||| | |||||      
 acuauga  uuUUCACC    GGGACA G UAAgc     u
a       cu        UACU      U C     uguac 


mirna_id: bta-mir-532
hairpin:
gacuugcuuu       a  U      A    A   CC  uggca 
          cucucuu CA GCCUUG GUGU GGA  GU     u
          ||||||| || |||||| |||| |||  ||     c
          gagagga gu cggaac caca ccu  ca     u
-------acc       c  u      c    c   cc  uuaau 


mirna_id: bta-let-7f-1
hairpin:
    a UG                      ---------       u 
ucag g  AGGUAGUAGAUUGUAUAGUUgu         gggguag g
|||| |  ||||||||||||||||||||||         ||||||| a
aguc c  uccguuaucuaacauaucaaua         ucccauu u
    - cu                      gaggacuug       u 


mirna_id: bta-mir-122
hairpin:
c        -      GG       C           --u  c 
 cuuagcag agcugU  AGUGUGA AAUGGUGUUUG   gu c
 |||||||| ||||||  ||||||| |||||||||||   ||  
 ggauuguc ucgaua  ucacacu uuaccgcaaac   ca a
c        a      aa       a           uau  a 


mirna_id: bta-mir-30c
hairpin:
ca   u  -aa     cc    ugu U       U   ACA        ug gag 
  gac gu   ccaug  guag   g GUAAACA CCU   CUCUCAGC  u   c
  ||| ||   |||||  ||||   | ||||||| |||   ||||||||  |   u
  cug ca   gguac  cguc   c cauuugu ggg   gagggucg  g   c
--   -  aaa     --    uuc u       u   --a        gu gag 


mirna_id: bta-let-7i
hairpin:
c    U                 U   --------  u     ugu 
 uggc GAGGUAGUAGUUUGUGC GUU        gg cgggu   g
 |||| ||||||||||||||||| |||        || |||||   a
 aucg uuccgucaucgaacgcg caa        uc gcccg   c
-    -                 u   uagaggug  -     uua 


mirna_id: bta-mir-23b
hairpin:
--  --          -  C      gugacu 
  GG  GUUCCUGGCA UG UGAUUU      u
  ||  |||||||||| || ||||||       
  CC  UAGGGACCGU AC ACUAaa      a
CA  AU          U  -      auuaga 


mirna_id: bta-mir-25
hairpin:
    a ug   ag    g     uu g     u   -  acg 
ggcc g  uug  aggc gagac  g gcaau gcu gg   c
|||| |  |||  |||| |||||  | ||||| ||| ||    
ccgg c  gac  UCUG CUCUG  C CGUUA Cgg cc   u
    c gu   AG    G     UU A     -   g  ccg 


mirna_id: bta-mir-34c
hairpin:
     ag     A   A    A     C      c  a 
agucu  uuacu GGC GUGU GUUAG UGAUUG ua u
|||||  ||||| ||| |||| ||||| |||||| ||  
uuaga  aaugg ccg caca caauc acuaac au a
     aa     a   g    c     -      c  a 


mirna_id: bta-mir-363
hairpin:
ug   u         ca  a         --ga   gu 
  uug cggguggau  cg ugcaauuuu    uua  a
  ||| |||||||||  || |||||||||    |||   
  aGC GUCUACCUA  GC ACGUUAaaa    gau  u
ca   -         UG  -         agag   aa 


mirna_id: mtr-MIR395c
hairpin:
         ug           cau     uau      gg      a 
gaguuccuu  aacgcuucaug   gagaa   cuauuu  ucuaau u
|||||||||  |||||||||||   |||||   ||||||  ||||||  
CUCAAGGGG  UUGUGAAGUAu   cuuuu   gauaga  agauua c
         GU           cuu     -cu      aa      c 


mirna_id: mtr-MIR395d
hairpin:
         ug          gca      uau      gg     aa 
gaguuccuu  aacgcuucau   ugagaa   cuauuu  ucuaa  u
|||||||||  ||||||||||   ||||||   ||||||  |||||   
CUCAAGGGG  UUGUGAAGUA   auucuu   gauaaa  agauu  c
         GU          --a      cuu      -a     ac 


mirna_id: mtr-MIR395e
hairpin:
         ug          -gcau      -        auu   uuu 
gaguuccuu  aacgcuucau     gagaau aucuaucu   ugg   a
|||||||||  ||||||||||     |||||| ||||||||   |||    
CUCAAGGGG  UUGUGAAGUA     uucuug uagauagg   acc   a
         GU          aauuc      a        auu   uaa 


mirna_id: mtr-MIR395f
hairpin:
         ug           cau     --a    ---   -u   uuu 
gaguuccuu  aacgcuucaug   gagaa   uauc   ucu  ugg   a
|||||||||  |||||||||||   |||||   ||||   |||  |||    
CUCAAGGGG  UUGUGAAGUAu   cuuuu   auag   aga  acc   a
         GU           cuu     aug    aaa   uu   uaa 


mirna_id: mtr-MIR395g
hairpin:
         ug         uau    -  u 
gaguuccuc  aacgcuuca   aaga gg u
|||||||||  |||||||||   |||| ||  
CUCAAGGGG  UUGUGAAGU   uucu cc a
         GU         Uac    a  u 


mirna_id: mtr-MIR395h
hairpin:
gac      ug          ac     guu       -  ---      aa 
   uuucuc  aacacuucau  aagag   auccauc ua   aucuaa  g
   ||||||  ||||||||||  |||||   ||||||| ||   ||||||   
   AAGGGG  UUGUGAAGUA  uucuu   uggguag au   uagauu  u
UUC      GU          ac     -gc       c  uua      ac 


mirna_id: mtr-MIR395i
hairpin:
         ug         -auc ug   caau    a 
gaguuccuc  aaugcuuca    a  aga    cuau u
|||||||||  |||||||||    |  |||    ||||  
CUCAAGGGG  UUGUGAAGU    u  ucu    gaua g
         GU         Aacu gu   ---u    a 


mirna_id: mtr-MIR395j
hairpin:
         ug         ---    u   a a    a 
gaguuccuc  aaugcuuca   aaca gag c aucu u
|||||||||  |||||||||   |||| ||| | ||||  
CUCAAGGGG  UUGUGAAGU   uugu cuu g uagg a
         GU         Aac    u   - a    u 


mirna_id: mtr-MIR395l
hairpin:
         ug          gcau      au      ----auu   u u 
gaguuccuu  aacgcuucau    gagaau  cuaucu       ugg c a
|||||||||  ||||||||||    ||||||  ||||||       ||| |  
CUCAAGGGG  UUGUGAAGUA    uuuuua  gauaga       acc g a
         GU          -acu      cc      aaagauu   u a 


mirna_id: mtr-MIR395m
hairpin:
         ug          gca      uau      auuugg     aa 
gaguuccuu  aacgcuucau   ugagaa   cuaucu      ucuaa  u
|||||||||  ||||||||||   ||||||   ||||||      |||||   
CUCAAGGGG  UUGUGAAGUA   auucuu   gauaga      agauu  c
         GU          --a      cuu      ----aa     ac 


mirna_id: mtr-MIR395o
hairpin:
         ug   u       uaaagggcuauagcaaga 
gaguuccuc  aac cuucauc                  a
|||||||||  ||| |||||||                  a
CUCAAGGGG  UUG GAAGUAg                  g
         GU   U       uauguuccuaaaaggaaa 


mirna_id: mtr-MIR395p
hairpin:
              a     u     acucaauuu 
gaguucccuuaaac uuuca uaagg         c
|||||||||||||| ||||| |||||          
CUCAAGGGGGUUUG GAAGU guucc         u
              C     U     aacuucucu 


mirna_id: osa-MIR395m
hairpin:
         u    u       g  --g          --a        u  a     cu   a 
gaguucucc caaa cacuuca ua   auagcuagcu   ggcuucau gc uuaca  guu c
||||||||| |||| ||||||| ||   ||||||||||   |||||||| || |||||  |||  
CUCAAGGGG GUUU GUGAAGU au   uguugaucga   ccggggua cg agugu  caa a
         -    -       G  aua          aaa        -  -     --   a 


mirna_id: osa-MIR395n
hairpin:
         u                c   auu 
gaguucccu caagcacuucacgacg acu   u
||||||||| |||||||||||||||| |||    
CUCAAGGGG GUUUGUGAAGUGuugu uga   a
         -                -   gag 


mirna_id: osa-MIR395o
hairpin:
      u                -    a  auua 
gaguuc cuuuaagcacuucaua cgac cc    u
|||||| |||||||||||||||| |||| ||     
CUCAAG GAGGUUUGUGAAGUAu guug gg    u
      -                u    -  auug 


mirna_id: osa-MIR395p
hairpin:
         u                c  -   u 
gaguucccu caagcacuucacgugg ac uau u
||||||||| |||||||||||||||| || |||  
CUCAAGGGG GUUUGUGAAGUGugcc ug gua c
         -                a  c   a 


mirna_id: osa-MIR395q
hairpin:
         u              ----    cua 
gaguucccu caagcacuucacau    gaca   u
||||||||| ||||||||||||||    ||||   u
CUCAAGGGG GUUUGUGAAGUGua    cugu   u
         -              uuau    aac 


mirna_id: osa-MIR395v
hairpin:
  a    cu     c        -    a aauu 
ga uucu  uuaag acuucaua cgac c    a
|| ||||  ||||| |||||||| |||| |    u
CU AAGG  GGUUU UGAAGUGu guug g    u
  C    -C     A        u    g aacu 


mirna_id: osa-MIR395w
hairpin:
--         uuaau          ----   a  au 
  gaguucucu     cauuucacau    ggc cu  u
  |||||||||     ||||||||||    ||| ||   
  CUUAGGGGG     GUGAAGUGug    ccg ga  u
CU         --UUU          ucau   -  au 


mirna_id: osa-MIR395r
hairpin:
         u   c          ----  ca     
gaguucccu caa cacuucacgu    gg  cuau 
||||||||| ||| ||||||||||    ||  ||| u
CUCAAGGGG GUU GUGAAGUGua    cc  gauu 
         -   U          ucau  ag     


mirna_id: mdv1-mir-M1
hairpin:
uucc  u       G    C              acau 
    cc uuUGCUU UUCA UGUGCGGCAuuauu    u
    || ||||||| |||| ||||||||||||||    u
    gg aAGCGAG AAGU ACGCGUCGUaaugg    a
--aa  c       A    -              ccac 


mirna_id: mdv1-mir-M2
hairpin:
aa        UG        CC            g   g 
  aagaaaGU  UAUUCUGC  GGUAGUCCGuuu uaa g
  ||||||||  ||||||||  |||||||||||| |||  
  uucuUUCG  AUAAGACG  CCGUCAGGCaag guu u
-g        --        --            -   c 


mirna_id: mdv1-mir-M3
hairpin:
     A            A    U  C  u   aa 
gcggc UGAAAAUGUGAA CCUC CC GC aga  u
||||| |||||||||||| |||| || || |||  a
uguUG AUUUUUACACUU GGGG GG cg ucu  g
     A            -    -  U  -   aa 


mirna_id: mdv1-mir-M4
hairpin:
    uUUA      UA        C     uc g 
gaag    AUGCUG  UCGGAACC UUCgu  g u
||||    ||||||  |||||||| |||||  |  
uuuC    UACGAC  AGUCUUGG AAgca  c g
    -CAG      --        U     -c a 


mirna_id: mdv1-mir-M5
hairpin:
u  ug   C   U        AU  -     guuuaa 
 ca  AAC GUA GCGAUCAC  UG ACacg      a
 ||  ||| ||| ||||||||  || |||||       
 gu  uUG CAU UGCUGGUG  AU UGUgc      a
g  gu   U   C        CU  G     auacau 


mirna_id: mdv1-mir-M6
hairpin:
-----------------------------------acg   ug -     U    UG  C     U U     u ac 
                                      ucc  g gaaaa CUGU  UU CGUAG G UCUCg g  a
                                      |||  | ||||| ||||  || ||||| | ||||| |  c
                                      agg  c cuuuU GACA  AA GCGUC C AGAGc c  u
cgaagguaagguacagcgcuguuaguccugcuacauua   gu u     -    GU  A     C U     u aa 


mirna_id: mdv1-mir-M7
hairpin:
---------------------------------------------g         U      GG      C   -Ucu  cc 
                                              gagaacUGU AUCUCG  GAGAUC CGA    cu  u
                                              ||||||||| ||||||  |||||| |||    ||   
                                              uuuuuGACA UAGAGC  CUCUAG GCU    ga  a
gauccuucgaagaugcuaauucgucaagacuccuguguaaaggggg         U      AU      A   caac  cc 


mirna_id: mdv1-mir-M8
hairpin:
------------------------------a     ac     c              UU    U  aucuau  u 
                               uuccu  ggaaa cUAUUGUUCUGUGG  GGUU CG      cg u
                               |||||  ||||| ||||||||||||||  |||| ||      ||  
                               gagga  ccuuu GAUAACAAGGCAUC  CCAG Gc      gc c
aagguacgaagccgucagcuuuggcccuuua     --     U              -U    U  -gucau  u 


mirna_id: ath-MIR771
hairpin:
--uaa     u       C    U  U        caaugaucucaauagagugcau 
     auucg caUGAGC UCUG GG AGCCCUCA                      g
     ||||| ||||||| |||| || ||||||||                       
     uaagc guacuug ggac cc ucgggagu                      c
gauug     u       u    u  -        agaugcagaaauguucuagcac 


mirna_id: ath-MIR472
hairpin:
uc          -     u  a      c       c  - -uu   --a   ga      augaau    ug  ---au    g   ga 
  uguauguaug uaugg cg aguagg aaaaucu ac c   ucu   gca  ucaaca      uuug  ga     agau uug  u
  |||||||||| ||||| || |||||| ||||||| || |   |||   |||  ||||||      ||||  ||     |||| |||   
  acauacauaC AUACC GC UCAUCC UUUUaga ug g   aga   cgu  aguugu      gaac  uu     uuug aau  u
cc          C     C  C      U       a  a uuu   acg   ag      ------    gu  guggu    g   gu 


mirna_id: ath-MIR773a
hairpin:
         u    -u         au    u  aga    c 
aggaggcaa agcu  gagcaaaua  ugau gc   aguc a
||||||||| ||||  |||||||||  |||| ||   ||||  
ucCUCUGUU UCGA  UUCGUUUgu  acug cg   ucag u
         U    CC         cc    u  aaa    c 


mirna_id: ath-MIR774a
hairpin:
uc    c          u              u    auu     c   u 
  auuu agauggcugu uggguaacuaauau uaag   uuggu aau u
  |||| |||||||||| |||||||||||||| ||||   ||||| |||  
  uaaa uCUACCGGUA ACCCAUUGGUUaua auuu   aacca uug a
uu    c          U              u    ---     -   a 


mirna_id: ath-MIR775
hairpin:
u          -    acgu          c       c    uu    -    ucaacuu 
 uuaaacguug cacu    gacauugaaa ugucuuu aaca  ccaa uauu       u
 |||||||||| ||||    |||||||||| ||||||| ||||  |||| ||||       c
 aauuuguaAC GUGA    CUGUAGCUUu acagaaa uugu  gguu auaa       g
a          C    CGAU          u       c    uu    u    cccauaa 


mirna_id: ath-MIR776
hairpin:
 ug  a   u     c    -         uu    ag   a  u     -   u   aa 
u  gg uua agcca gaac ucaauagaa  cuua  auc ug gaaaa cgu gac  g
|  || ||| ||||| |||| |||||||||  ||||  ||| || ||||| ||| |||   
a  cc aau ucggu cUUG AGUUAUCUU  GAAU  uag ac cuuuu gca cug  a
 gu  -   u     a    U         CU    CU   a  -     a   u   cu 


mirna_id: ath-MIR777
hairpin:
          -   a            u       -c      uuau    gu   c 
agagagcaac aaa ucaguguguauu guuaaga  aaaugu    auaa  cgu c
|||||||||| ||| |||||||||||| |||||||  ||||||    ||||  |||  
ucuUUCGUUG UUU AGUUACGCAUaa caauucu  uuuaca    uguu  gcg a
          C   G            u       aa      ----    --   u 


mirna_id: ath-MIR778
hairpin:
-         C                    a       cuccauccuauacagauuuugggacaugu 
 ccgccuUGG UUGGUUUAUGUACACCGagu uguucag                             g
 ||||||||| |||||||||||||||||||| |||||||                             c
 ggcggaacc aaccagauacauguggcuca acaaguc                             c
u         a                    a       aagaaagauauauacuuuggaguugggau 


mirna_id: ath-MIR779
hairpin:
      -           u     u    a    uuucaa  a      u   c     c               u          
aaugag aguaauauagu gaauc ucga agua      ga gucagc gag uuucu gucaucacuuauuag aaauauagu 
|||||| ||||||||||| ||||| |||| ||||      || |||||| ||| ||||| ||||||||||||||| |||||||| c
uUACUC UCGUUGUAUCG CUUag aguu ucau      cU CAGUUG CUU AAAGG UAGUagugaguaguu uuuauaucu 
      G           U     u    c    ----ua  -      -   U     U               -          


mirna_id: ath-MIR780
hairpin:
      au        u        u      a        a ------     ----a          u   guuucacaaacaucaacag 
caagau  cagauauu cacgaaga aucugc uaacagcu c      gagga     auugugauuu auc                   c
||||||  |||||||| |||||||| |||||| |||||||| |      |||||     |||||||||| |||                    
guuuUA  GUCUAUAA GUGCUUCU UGGACG GUUGUCGA G      uuccu     uaacacuaaa uag                   u
      CG        -        U      A        C AUCUuu     aucac          -   gcagguauugcuagguacc 


mirna_id: ath-MIR781a
hairpin:
       -                   uu     c  a a     a 
ucaaaUU AGAGUUUUCUGGAUACUUA  aguua ua c aagag g
||||||| |||||||||||||||||||  ||||| || | ||||| g
aguuuaa ucucaaaagaccuaugaau  ucaau au g uucuu g
       a                   uu     u  a c     c 


mirna_id: ath-MIR782
hairpin:
           A     A        G      aaauaagaugaaaaggcuauu 
aaccuuuuucu CAAAC CCUUGGAU UUCUUu                     a
||||||||||| ||||| |||||||| ||||||                     u
uuggagaaaga guuug ggaaccua aagaaa                     u
           c     c        a      accgaaguacaacaaguaauc 


mirna_id: ath-MIR783
hairpin:
-                    c                             a        a    a c     u    c                                  a                                 aagaucuggugagaaugg 
 gacacuagucuuaaccauau uuuugucggaagauucaggagaacaugga gagcaaag uucu g aaauc cuua ccaaucaacuucaucaccagaucuuuugucggaa auucaggagaacaugaucguuugguacgaauac                  a
 |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| | ||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||                   
 cugugaucagaauuggugua aaaacagccuucuaaguccuCUUGUACUU CUCGUUUC AAga c uuuag gaau gguuaguugaaguaguggucuagaaaacagccuu uaaguccucuuguacuagcaaaccaugcuugug                  c
u                    a                             G        G    c a     u    u                                  c                                 cagagagaaaggaagaag 


mirna_id: ptc-MIR171k
hairpin:
    c    u        c  c       uc    uga 
gaua uggc cgguucaa cu aucguag  uuga   a
|||| |||| |||||||| || |||||||  ||||    
CUAU ACCG GCCGAGUU GG ugguauc  aacu   u
    A    C        A  u       ua    uag 


mirna_id: ptc-MIR403c
hairpin:
--                         cacaacc   cac 
  ggUUUGUGCGUGGAUCUGAGGCCau       guc   u
  |||||||||||||||||||||||||       |||    
  UCAAACACGCACUUAGAUUucggua       cag   a
GC                         -acccac   cac 


mirna_id: hsa-mir-765
hairpin:
u      gcug    a  ug  --g    guag  agc       ------        cga 
 uuaggc    auga ag  ga   uuca    ac   ccuuuuc      aagcccua   g
 ||||||    |||| ||  ||   ||||    ||   |||||||      ||||||||    
 aguccg    ugcu uu  cu   aaGU    UG   GGAAGAG      uuuggggu   a
a      --ag    c  gu  agg    --AG  GAA       GAGGUc        caa 


mirna_id: hsa-mir-770
hairpin:
      -c     cc   c              GUCA     A      cu 
aggagc  accuu  gag cUCCAGUACCACGU    GGGCC caugag  g
||||||  |||||  ||| ||||||||||||||    ||||| ||||||   
uucucg  ugggg  cuc ggggucguggugua    uccgg gugcuc  g
      uc     -a   c              ---g     -      cg 


mirna_id: sme-bantam-a
hairpin:
   ug     ac         a   augaua 
uau  guuuu  uagugaucu aga      u
|||  |||||  ||||||||| |||       
auG  CGAAA  AUCACUAGA Ucu      a
   GU     GU         G   aaaaau 


mirna_id: sme-bantam-b
hairpin:
--------     aaaaC          U A          au 
        cuuua     CGGUUUUCGU G GAUCUUAgau  a
        |||||     |||||||||| | ||||||||||   
        gaagu     GUCGAAAGCG C CUAGAGUcua  u
cuuucgcu     -auUA          U A          cu 


mirna_id: sme-bantam-c-1
hairpin:
-   uu            U               
 agu  aAAGGCUUUCAU AUGAUUUUAAaaug 
 |||  |||||||||||| ||||||||||||| u
 uca  UUUUCGAAAGUA UACUAGAGUuuuau 
g   -u            U               


mirna_id: sme-let-7a
hairpin:
        caU         U       GA  aa    aag 
aucaaauu   GAGGUAGAA GUUGGAU  CU  ggua   g
||||||||   ||||||||| |||||||  ||  ||||   u
uaguuuaa   UUCCGUCUU UAACUUG  Ga  cuau   a
        AAU         U       UC  ga    aca 


mirna_id: sme-let-7b
hairpin:
    ca       uU    -     U        A   aa 
guaa  uuaacaa  GAGG UAGAU GUUGGAUG CUu  u
||||  |||||||  |||| ||||| |||||||| |||  u
cauu  aauuguu  CUUC GUCUA CAACUUAC gaa  u
    -a       CU    U     U        C   au 


mirna_id: sme-let-7c
hairpin:
     c     a        -  U  CU         gaagaaa   au a 
ucaua uaacu gaUGAGGU AG GA  CAAAAGGUU       uac  c a
||||| ||||| |||||||| || ||  |||||||||       |||  |  
aguau auuga cUAUUUCG UC CU  GUUUUCCAa       aug  g a
     -     -        A  U  UU         ------a   ag u 


mirna_id: sme-lin-4
hairpin:
   a     aaucU     A  C U          uugaccauuaaauu    g 
auc guuau     CCCUG GA C UCGACUGUGU              auca a
||| |||||     ||||| || | ||||||||||              ||||  
uag cgaua     GGGAU CU G AGCUGACACg              uagu a
   c     aaaUU     A  A U          -------------u    a 


mirna_id: sme-mir-1a
hairpin:
    A    U    GA            a  caa  g 
agcg GCAU UUUC  GGCAUUUCAUag gu   au a
|||| |||| ||||  |||||||||||| ||   ||  
ucgU CGUA AAAG  CUGUAAGGUguc ca   ua a
    A    U    AG            -  -aa  a 


mirna_id: sme-mir-1b
hairpin:
     cacac  G         A       G  ag    uu 
aacaa     gG CAUAAUUCA GAUAUUC AU  gguu  u
|||||     || ||||||||| ||||||| ||  ||||   
uuguu     CU GUAUUAAGU CUGUAAG Ua  ucaa  g
     -acuu  G         G       G  -a    ug 


mirna_id: sme-mir-1c
hairpin:
       gag   C          A      GAA     uc 
guuacgu   gug ACAUUAUUCA AACAUU   UCACa  g
|||||||   ||| |||||||||| ||||||   |||||   
uaaugca   caC UGUGAUAAGU UUGUAA   GGUgu  a
       -ga   -          G      ---     ca 


mirna_id: sme-mir-2a-1
hairpin:
       u  gugA      -   -U   A         uuucua 
guucauu au    GUUCCA GUG  GCU UGAUGUAua      a
||||||| ||    |||||| |||  ||| |||||||||       
uaaguaa ua    CAAGGU CGC  CGA ACUAUauau      a
       u  aUCG      U   CC   C         cuuuaa 


mirna_id: sme-mir-2a-2
hairpin:
     cuuaauuga      --   U            ug 
guuca         GUUCUA  CGG GUUGUGAUAUAa  a
|||||         ||||||  ||| ||||||||||||  u
uaagu         CAAGGU  GCC CGACACUAUauu  u
     auaaaaUCG      UC   C            ua 


mirna_id: sme-mir-2b
hairpin:
       -gc        UU         CAGu     u 
gguuauu   uuUCAUCA  GUUGGUUGU    uauug a
|||||||   ||||||||  |||||||||    |||||  
ucgauag   AGAGUAGU  UAACCGACA    auaac u
       agU        UU         --CU     u 


mirna_id: sme-mir-2c
hairpin:
uuuc   uu     -acaaaA       -A     U    U     u 
    uuu  caaau       AUCAUCA  UUUGG CUGU AUAaa g
    |||  |||||       |||||||  ||||| |||| ||||| g
    aaa  guuua       UAGUAGU  AAACC GACA Uauuu c
-uac   cu     aauauUC       CA     -    C     u 


mirna_id: sme-mir-2d
hairpin:
     auuu     --c   c        UU     A    C    ga   ug uaac 
gugac    ugccu   uua gGACAUCA  AUUUG CUGU GAUa  uau  g    a
|||||    |||||   ||| ||||||||  ||||| |||| ||||  |||  |     
cacug    augga   aau CCUGUAGU  UAAAC GACA CUau  aug  u    u
     ----     aua   -        -U     C    -    -g   gu uuau 


mirna_id: sme-mir-7a
hairpin:
     uuU   A     UU  U         uu   ua 
cauaa   GGA GACUA  GA UUAGUUGAa  ggu  a
|||||   ||| |||||  || |||||||||  |||   
guAUU   CCU CUGAU  CU AGUCAACUu  uca  u
     ---   A     --  U         --   uu 


mirna_id: sme-mir-7b
hairpin:
    --uaac          aa   U      C      UU       caga     u 
ggaa      acagaaaaau  uca GGAAGA UGUCGA  UCGUUGU    gcauu u
||||      ||||||||||  ||| |||||| ||||||  |||||||    |||||  
ucuu      uguuuuuuuA  GGU CCUUCU AUAGUU  AGCAACa    uguaa u
    caaagu          --   -      A      UU       ---a     a 


mirna_id: sme-mir-7c
hairpin:
u  a   guuu     uu  U      CU  U         Aac  a 
 ga uaa    aauau  ug GGAAGA  GA GAUUUGCUG   gc u
 || |||    |||||  || ||||||  || |||||||||   || g
 cu auu    uuaua  AC UCUUCU  CU CUGGGCGAC   cg c
a  a   -auu     uu  -      UU  U         ---  a 


mirna_id: sme-mir-8a
hairpin:
    A     -A   A      UUA   cagaau 
aauG CAUCG  AUC GACAGU   aga      u
|||| |||||  ||| ||||||   |||      u
uuaC GUAGC  UGG CUGUCA   Ucu      a
    C     AA   A      UAA   aaaaua 


mirna_id: sme-mir-10b
hairpin:
         au  gA   C  U    C   G       --     --   ugu 
cugucaccg  cu  ACC UG AGAU CGA UUUGAuu  aaugc  caa   u
|||||||||  ||  ||| || |||| ||| |||||||  |||||  |||   g
gauaguggu  gA  UGG AC UCUA GCU aaacuaa  uuacg  guu   a
         -c  AG   A  U    A   a       cu     aa   uug 


mirna_id: sme-mir-12
hairpin:
auuuu    auc   c c      UU          U    aaau      ag 
     aucc   gcu a UGAGUA  CUAUCAGGAG CGAa    gcguua  u
     ||||   ||| | ||||||  |||||||||| ||||    ||||||  u
     uagg   cga U AUUCAU  GGUAGUUCUC GCuu    ugcaau  a
-uuuu    aaa   a A      UU          U    ----      ca 


mirna_id: sme-mir-13
hairpin:
    -       --            -   a 
GAGC CUUUGGC  GGCUGUGAUAUg aua u
|||| |||||||  |||||||||||| |||  
uuCG GAAAUCG  CUGACACUAUac uau u
    A       UA            a   a 


mirna_id: sme-mir-745
hairpin:
--auuaacuc   ga      -       -    C   A   c  aua 
          ugu  ugaUAC GCUCUUA CCAG UAG AUg ug   a
          |||  |||||| ||||||| |||| ||| ||| ||   u
          aca  acUGUG CGAGAAU GGUC GUC Uac ac   u
caaacuuucc   -a      U       U    C   G   -  cau 


mirna_id: sme-mir-746
hairpin:
---    --aa    cauaaca  uaG  G    A      U    AUu    gaaa   aaau       u 
   ugau    uucg       uc   CC GAUA AUCCUG GUGC   gaua    gug    gauuuua u
   ||||    ||||       ||   || |||| |||||| ||||   ||||    |||    |||||||  
   acua    aagc       ag   GG CUAU UGGGAC CACG   cuau    cau    cuagaau c
acu    guac    -----aa  uUA  G    A      -    -AU    --ac   ----       a 


mirna_id: sme-mir-31a
hairpin:
uuuua     a    uuaA  C   A       A       caac     g 
     uuguu uguu    GG AAG UGUUGGC UAACUGA    aauuc a
     ||||| ||||    || ||| ||||||| |||||||    |||||  
     aacaa acga    CC UUC ACGAUUG AUUGACu    uuagg a
----a     a    uagA  A   -       C       uuaa     a 


mirna_id: sme-mir-31b-1
hairpin:
       auga  A  C     G    C       A   acu 
auugaua    ca GG AAGAU CUGG AUAGCUG uaa   a
|||||||    || || ||||| |||| ||||||| |||    
uaacuau    gU CC UUCUA GACU UAUCGAC auu   u
       auaa  C  U     G    -       c   auu 


mirna_id: sme-mir-36a
hairpin:
   c     guuu     C   -         UU     uua 
agc acagu    UGAUG AUG CUACUUGGU  uguug   u
||| |||||    ||||| ||| |||||||||  |||||   u
uug uguca    AUUAC UAC GAUGGGCCA  acaau   a
   u     acau     U   A         CU     uau 


mirna_id: sme-mir-61a
hairpin:
uuuuua   --ua       uugau     UU     -       GCA      u 
      gaa    gaaacuc     aCAGU  GUGAG UUUCUAG   Uauaga u
      |||    |||||||     |||||  ||||| |||||||   ||||||  
      cuu    uuuugag     UGUCA  CACUU AAAGAUC   GUaucu u
---uua   caaa       caugu     UU     G       --A      u 


mirna_id: sme-mir-71a-1
hairpin:
auuuuaaau     aa         CG           a gcu 
         gcaug  UGAAAGACA  GGUAGUGAGAU a   a
         |||||  |||||||||  ||||||||||| |    
         ugugc  AUUUUCUGU  CCGUUACUCUa u   u
----uuuau     aA         AA           c aua 


mirna_id: sme-mir-71a-2
hairpin:
-u      uaac               GUG   U       
  uggaua    UGAAAGACACGGGUA   AGA auggau 
  ||||||    |||||||||||||||   ||| ||||| u
  acuuau    ACUUUCUGUGCUUAU   UCU Uacuuu 
gc      uuaU               --A   C       


mirna_id: sme-mir-71b
hairpin:
-----         acuc             GG   U       auauuauc 
     ugauucagu    uuUGAAAGACACA  UAG GGGACag        u
     |||||||||    |||||||||||||  ||| |||||||         
     acuaaguua    aaGCUUUUUGUGU  AUC UCCUguu        a
uacua         ccaa             -A   U       cgaaaaua 


mirna_id: sme-mir-71c
hairpin:
gua    ucuU       A              au      u 
   guuu    GAAAGAC UGGGUAGUGAGAUu  uuaaau a
   ||||    ||||||| ||||||||||||||  |||||| a
   cgaa    CUUUUUG ACUUAUUACUCUaa  aauuua a
---    uAUU       A              --      u 


mirna_id: sme-mir-79
hairpin:
uuga     aa   -cuU       C  C            a  ga 
    aacau  ucu    CUUUGGU AU UGGCUUUGUGAu ga  a
    |||||  |||    ||||||| || |||||||||||| ||  a
    uugua  aga    GAAACCA UA AUCGAAAUGcua cu  u
uagg     aa   uCGU       U  A            -  au 


mirna_id: sme-mir-87a
hairpin:
---uu     -    uucA        UAA       AA    aug   g 
     ugcca guau    ACACUUGG   UUUGCUC  ACCa   ucc a
     ||||| ||||    ||||||||   |||||||  ||||   ||| a
     acggu uaua    UGUGAACU   AAACGAG  Uggu   agg a
aaauu     g    --uA        UUG       --    cug   a 


mirna_id: sme-mir-87b
hairpin:
uuc     -- g   u  ugc      C   A         AAU     uu  u   a 
   auuga  u cgu ga   uUCAUU GAA UUUUGCUCA   CCauu  ga aau a
   |||||  | ||| ||   |||||| ||| |||||||||   |||||  || |||  
   uggcu  a gca cu   GAGUAA CUU GAAACGAGU   Gguag  cu uua u
--c     ua g   -  uua      A   C         ---     --  u   a 


mirna_id: sme-mir-92
hairpin:
-     cuaa       A  U         G    --c   ug 
 aauug    aUGGUAA UA CUAGUGCAA UCua   agg  a
 |||||    ||||||| || ||||||||| ||||   |||   
 uuaac    uaCUAUU AU GAUCACGUU AGau   ucu  a
u     auac       A  U         -    uuu   uu 


mirna_id: sme-mir-124a
hairpin:
u        a  U  U    A    GA         auuua 
 ucaaucag ug GC UUUA CGCG  GCUUUAGUa     a
 |||||||| || || |||| ||||  |||||||||      
 aguuaguu aU CG AAGU GCGC  CGGAAUcau     c
g        c  U  U    G    -A         augua 


mirna_id: sme-mir-124b
hairpin:
guau    gaa     -        AA        U   -  a 
    ccau   aauuU GCAUUUAC  CGUGUCUU AGU uc u
    ||||   ||||| ||||||||  |||||||| ||| ||  
    ggua   uuaAG CGUAAGUG  GCACGGAA Uca ag g
auuu    -aa     U        GC        -   c  u 


mirna_id: sme-mir-124c-1
hairpin:
ug     a   uuua  a   C     U    A    U   ag 
  auccu uuc    cu GCG UCACC CGUG CCUU GUc  u
  ||||| |||    || ||| ||||| |||| |||| |||  g
  uagga aag    gA CGU AGUGG GCAC GGAA cag  u
ag     -   --ua  C   A     C    -    U   gu 


mirna_id: sme-mir-125a
hairpin:
--c   ug            UC     G    UU         uguuu 
   ugu  ucuguauuuaua  CCUGA ACCA  GACUGCAUu     g
   |||  ||||||||||||  ||||| ||||  |||||||||     a
   acg  agguauaggugu  GGACU UGGU  UUGAUGuaa     g
cuu   --            UA     A    UU         cuuug 


mirna_id: sme-mir-125b
hairpin:
-   a   au    caU C       C     A    U a a    a 
 gca guu  ucga   C CUGAGAU AUAAU UGCC g g uuug a
 ||| |||  ||||   | ||||||| ||||| |||| | | ||||  
 cgu caa  aguu   G GACUCUG UAUUA AUGG c c aaac c
a   -   au    AAU A       U     G    - - -    g 


mirna_id: sme-mir-133b
hairpin:
--a        uuguau      CUA     U A     a   g 
   aaacacuu      uUGCUG   GAUGG G AUCaa acc u
   ||||||||      ||||||   ||||| | ||||| ||| u
   uuugugaa      aACGAC   CUACC C UGGUU ugg u
cua        -cuuuu      CAA     - C     c   g 


mirna_id: sme-mir-184
hairpin:
        uuaAC     U   U         UCAcauuuauua 
gauuuuca     UCCUU GUG AUCUCCGUU            u
||||||||     ||||| ||| |||||||||             
uuaaaagu     AGGAA CGU UGGAGGCAG            a
        uuauA     U   U         gucauauuuacu 


mirna_id: sme-mir-190a
hairpin:
       uu gA              AU     Aua 
gauuaac  c  GAUAUGUUUGGUUA  UGGUG   g
|||||||  |  ||||||||||||||  |||||   g
uuaauug  g  CUAUACGAGCCAGU  ACCAc   u
       uu AC              -C     caa 


mirna_id: sme-mir-190b
hairpin:
     u   -au           U    UAU     ---------   g 
gcacu caa   cgUGAUAUGUU GGUU   UGGUG         Agu u
||||| |||   ||||||||||| ||||   |||||         |||  
cguga guu   GUGCUAUGUAA CCGA   ACCAc         uca a
     -   acU           U    -UU     aaucuuuag   a 


mirna_id: sme-mir-747
hairpin:
   g   u   c       C UC       U     ga   a   u 
uca uuc guu aUAAUCU A  UGGUAAU GAAGU  ucu uuu u
||| ||| ||| ||||||| |  ||||||| |||||  ||| ||| u
agu aag uaA UGUUAGA U  ACUAUUA CUUCa  aga aaa a
   a   c   -       C UU       -     -a   a   a 


mirna_id: sme-mir-219
hairpin:
        u    c    U U    A         --CAa   cuagaau 
cgguaauu auug UGAU G CCAU CGCAGUUCU     ggu       c
|||||||| |||| |||| | |||| |||||||||     |||        
gucguuaa uaac ACUA C GGUA GCGUUAAGA     ccg       g
        -    a    - U    A         Auuug   uuaagca 


mirna_id: sme-mir-277a
hairpin:
ugg        uu   -uuA        U   A      U    aa 
   uaaacugu  ucu    CGUAUUCG UGG GCAUUU uaca  c
   ||||||||  |||    |||||||| ||| |||||| ||||  a
   auuugaca  aga    GUAUAGGC AUC CGUAAA augu  a
--a        -u   uaCA        U   A      U    aa 


mirna_id: sme-mir-277b
hairpin:
-    g    ga     AU    -      GC    g  aa 
 gguu uauu  ucUUG  CAGA AAUGCA  UUCa ag  a
 |||| ||||  |||||  |||| ||||||  |||| ||   
 ccga guaa  AGAAC  GUCU UUACGU  AAgu uc  u
u    a    -a     CG    A      AA    g  ac 


mirna_id: sme-mir-277c
hairpin:
       auauua            -U      AU    -   aa 
aucauuu      AUCAUAUCAGAU  UGCAUU  Uauu aug  u
|||||||      ||||||||||||  ||||||  |||| |||  u
uaguaaa      UAGUAUGGUCUA  ACGUAA  AUaa uac  a
       -guuua            UU      --    c   aa 


mirna_id: sme-mir-278
hairpin:
         cuu   c        C    UU    A  U     uucaag 
ggucgugau   uga UUCGAAUG UAUU  CACC GA gcuug      u
|||||||||   ||| |||||||| ||||  |||| || |||||      u
cuagcauua   auu aAGCUUAC AUGA  GUGG CU cgaac      c
         ---   a        A    GG    -  -     ugacaa 


mirna_id: sme-mir-281
hairpin:
uuac     aca         -         G   ca u   -    c 
    agcuu   aUGAAGAGC UAUUCAUGA GUg  g aua auga a
    |||||   ||||||||| ||||||||| |||  | ||| |||| a
    ucgaa   uaCUUCUCG AUAGGUACU Uac  c ugu uacu u
aaua     -aa         U         G   cc u   c    u 


mirna_id: sme-mir-67
hairpin:
-    aau    G    A   -UAU       U        
 gugu   auua CCUC UUC    GGGUUGU AUgaugc 
 ||||   |||| |||| |||    ||||||| |||||| a
 uaca   uaaU GGAG AAG    UCCAACA Uacuaua 
g    -gc    G    C   UACC       C        


mirna_id: sme-mir-748
hairpin:
caa     -uua gU            G     A    a 
   ucaca    u  CCUUAUUAUAUU CUGUC AGUa g
   |||||    |  |||||||||||| ||||| |||| c
   agugu    a  gGAGUAAUGUGA GGCAG Ucau a
-aa     uaaa ug            A     G    c 


mirna_id: sme-mir-749
hairpin:
          ---------      ---      --GU   g g      cu 
aucGCUGGGA         UGAGCC   UCGGUG    ccg g ugcagg  u
||||||||||         ||||||   ||||||    ||| | ||||||  c
uagcgaccuu         gcuugg   agccac    ggc u augucc  a
          uccaccuua      uga      aguu   - g      aa 


mirna_id: sme-mir-750
hairpin:
-a   aa     a    c  C        GU    UUUAG   -     cac  uc 
  uug  aucag uuuu aG ACUGGAAG  UUGG     CUg cugug   cg  a
  |||  ||||| |||| || ||||||||  ||||     ||| |||||   ||   
  agc  uaguc gaaa UC UGACCUUC  AAUC     GAC gacac   gc  u
ca   ga     -    -  U        UC    ---UA   U     --a  ug 


mirna_id: sme-mir-751
hairpin:
acua        --uu  -ug     ---uccg    aau    c 
    auuuuguu    cu   uaaac       auag   gauu a
    ||||||||    ||   |||||       ||||   |||| u
    ugaaACAG    GG   GUUUG       uauc   uuag a
-uua        UACC  UAA     UACaaaa    -ag    a 


mirna_id: sme-mir-752
hairpin:
a      -au  -   -    a   ga     U    A -         A    aguu 
 uugauu   ag uua ucua uuu  aaACC CCAA G UGAUUGUGA Uaaa    u
 ||||||   || ||| |||| |||  ||||| |||| | ||||||||| ||||    u
 agcuaa   uc agu agau gaa  UUUGG GGUU C ACUGAcacu auuu    a
a      cau  u   g    -   ag     U    A G         a    aauu 


mirna_id: sme-mir-753a
hairpin:
u       -    u           U           u 
 aaaguau auuu aGAGCUUGGAU GUGAUCUCAua a
 ||||||| |||| ||||||||||| |||||||||||  
 uuucaua uaaa ucucgaacuua uacuagaguau u
u       a    u           u           u 


mirna_id: sme-mir-754a
hairpin:
a  -  --gc             U  UU        u 
 cc ca    auGUUGCUUGGGG UA  ACUAuauu a
 || ||    ||||||||||||| ||  ||||||||  
 gg gu    uauaacgaacuuc au  ugauauaa u
a  u  agac             u  uu        u 


mirna_id: sme-mir-755
hairpin:
-uuuc      -    CU    U       C    u 
     uguagU GGAG  AUUG AUUUCAC gugg u
     |||||| ||||  |||| ||||||| ||||  
     gCAUCA CCUC  UAAC UAGAGUG uauc g
auuua      A    AU    U       c    g 


mirna_id: sme-mir-756
hairpin:
uaaaa  ug     aauC    U       UU       ---c    uu 
     gu  ggaua    GAUA GUGGUAA  UGGAUGA    auaa  a
     ||  |||||    |||| |||||||  |||||||    ||||   
     ca  cuuau    CUAU UACUAUU  ACCUACu    uguu  a
--gua  gu     aaAA    U       CU       cuaa    uc 


mirna_id: sme-mir-277d
hairpin:
     ucaaaaa G        --UU        U   uaa 
aagca       u UUGGUUAG    GUGCAUUU Cau   a
|||||       | ||||||||    |||||||| |||    
uucgu       a AACCGGUC    UACGUAAA gua   u
     -ugauaa G        UAUU        U   uua 


mirna_id: cel-mir-784
hairpin:
u   ac  -   c UG  A    C GC          -a   ca 
 ucg  gu cca g  GC CAAU U  GUACGUAGAa  gau  a
 |||  || ||| |  || |||| |  ||||||||||  |||   
 agu  ca ggu C  CG GUUG A  CAUGUAUcuu  cug  a
a   ga  c   C GU  C    U AA          ca   aa 


mirna_id: cel-mir-785
hairpin:
    uu    u    c   a         uu      a   gaaacc 
gcuc  uuuc cacc auc gcacagaau  uucgcu aca      u
||||  |||| |||| ||| |||||||||  |||||| |||      c
cgag  aaag gugg uAG UGUGUUUUG  AAGUGA Ugu      a
    -u    -    -   A         UU      A   aacaaa 


mirna_id: cel-mir-786
hairpin:
     -a  uc     C        G UG       U    aaag 
gggau  gu  ccgau GAAUAUCA U  GGGUAUU ACaa    a
|||||  ||  ||||| |||||||| |  ||||||| ||||     
cucua  ua  ggcUA CUUGUAGU A  CCCGUAA Uguu    c
     ag  gu     A        A GU       -    aaaa 


mirna_id: cel-mir-787
hairpin:
     -     u             --AU    U       -  uc 
gaugu aucag ggacgAAAGAUAC    ACGA CUUACAu cu  a
||||| ||||| |||||||||||||    |||| ||||||| ||  a
uuaca uaguc ucuGCUUUCUAUG    UGCU GAAUgua gg  a
     c     -             AUUU    C       u  ua 


mirna_id: cel-mir-788
hairpin:
   c          --      CU       G    guuc 
gcu acuuuUCCGC  UUCUAA  UCCAUUU CAGa    a
||| ||||||||||  ||||||  ||||||| ||||     
uga ugaAAAGGUG  AAGAUU  AGGUAAA Gucu    a
   u          CU      --       G    aaug 


mirna_id: cel-mir-789-1
hairpin:
u    -  aa   a        a        a  a      -   aag 
 gucc ug  ggc ggcaauug ugacccag ca ggacua auc   a
 |||| ||  ||| |||||||| |||||||| || |||||| |||   u
 cggg gc  ccg cUGUUAAC ACUGGGUC GU CCUgau uag   u
a    c  cc   g        C        C  C      c   cug 


mirna_id: cel-mir-789-2
hairpin:
u    -  aa   g        a                   uca  a 
 gucc ug  ggc gacaauug ugacucaggcagggacuaa   ug u
 |||| ||  ||| |||||||| |||||||||||||||||||   || u
 cagg gc  ccg cUGUUAAC ACUGGGUCCGUCCCUgauu   gc g
a    c  cc   g        C                   -ua  u 


mirna_id: cel-mir-790
hairpin:
     C       -UC  G   A      uuuca 
gccgg UUGGCAC   GC AAC CCGCGa     c
||||| |||||||   || ||| ||||||     u
cggCC AACUGUG   CG UUG GGCgcu     u
     A       UCU  A   C      caaua 


mirna_id: cel-mir-791
hairpin:
    cu      A       --  UU  A         caa    
gaac  ucgauu CCUUAUC  CG  GU GCCAAAGUu   cga 
||||  |||||| |||||||  ||  || |||||||||   || a
uuug  agcuAA GGAAUAG  GC  CA CGGUUUcaa   gcg 
    uu      C       AC  CU  -         -cg    


mirna_id: cel-mir-792
hairpin:
    ug uc              C  A     UAG         a 
aagu  g  aacguuUGAGAGUU AA AGAUU   CAAUUuuau c
||||  |  |||||||||||||| || |||||   |||||||||  
uuua  c  uugcAGACUUUCAA UU UCUAA   GUUaaagug g
    gu uu              C  C     --A         a 


mirna_id: cel-mir-793
hairpin:
u     --   aaa             uu    a   caa     a 
 gguug  gua   gucuguuuaacua  guac uca   uuuuc c
 |||||  |||   |||||||||||||  |||| |||   ||||| u
 ccaac  cau   cAGACAGAUUGAU  UAUG AGU   aaaag g
a     au   aua             UC    G   -ua     c 


mirna_id: cel-mir-794
hairpin:
    gcgu    c        AU  U    G   C   g  a 
cuga    gucu uUGAGGUA  CA CGUU UCA Uuc ca a
||||    |||| ||||||||  || |||| ||| ||| ||  
gacu    cgga AGCUCUAU  GU GCAA AGU aag gu g
    -auu    A        CU  U    A   u   -  u 


mirna_id: cel-mir-795
hairpin:
     --   a    c       G        G   GC    uac 
gaaac  guu ccug UGAGGUA AUUGAUCA CGA  UUga   c
|||||  ||| |||| ||||||| |||||||| |||  ||||    
uuuug  cga ggaC GCUUCAU UGACUAGU GCU  aacu   c
     uu   c    U       A        -   AA    ugc 


mirna_id: cel-mir-796
hairpin:
     aa       c        A UU      A    -   ca 
acucu  ugacaag UGGAAUGU G  GAGGUU GUAA aag  c
|||||  ||||||| |||||||| |  |||||| |||| |||  u
ugaga  acuguuc gccuugca c  uuccaa cauu uuc  a
     aa       a        - cg      a    g   au 


mirna_id: cel-mir-797
hairpin:
   c   ugg     A      C  UCA           a  cau 
cgu caa   acgaU UCACAG AA   CAAUGAGAAGA ua   c
||| |||   ||||| |||||| ||   ||||||||||| ||    
gua guu   ugcUA AGUGUC UU   GUUACUUUUcu au   u
   a   -ua     A      -  -UG           c  aga 


mirna_id: cel-mir-798
hairpin:
       u  u  ag    -   a     u   a    u 
uacuguu ca gu  gugu uaa guuug aca gaag u
||||||| || ||  |||| ||| ||||| ||| |||| a
augacgA GU CA  UAUA AUU CGAAU ugu cuuu g
       -  -  GU    C   C     -   -    u 


mirna_id: cel-mir-799
hairpin:
       a  uu       cg      aaa  u    u     -  aa 
guuuuuc au  uuuucac  guuuua   ag gguu cacau uc  u
||||||| ||  |||||||  ||||||   || |||| ||||| ||   
caaaagg ua  aaaGGUG  CGAAAU   UC CCAA GUgua ag  a
       c  -u       AU      -AG  -    -     c  aa 


mirna_id: cel-mir-800
hairpin:
        U               A       cuu 
acggcggc GACAAUUUCCGAGUU GGCcacu   a
|||||||| ||||||||||||||| |||||||   u
ugccgcCG CUGUUAAAGGCUCAA CCGguga   a
        U               A       cua 


mirna_id: mmu-mir-804
hairpin:
  -    -     ca   --u     uu       ccc   ua  c    u 
cc cuac acauc  ucu   ugagg  acaacuu   cag  ga uguu c
|| |||| |||||  |||   |||||  |||||||   |||  || ||||  
gg ggug uguag  AGG   ACUCC  UGUUGAG   GUu  cu acag c
  c    g     -a   UCC     -U       --U   -c  u    u 


mirna_id: mmu-mir-741
hairpin:
u             U     C  A      aaau 
 ugaucUACGUAGA UGGUA CU UCAUGu    c
 ||||||||||||| ||||| || ||||||    a
 auuAGAUGUAUCU ACCGU GA AGUacg    u
a             U     A  G      aaug 


mirna_id: mmu-mir-742
hairpin:
    c      -      U   AA    g  a 
ugcu UACUCA CAUGGU GCU  UCAc ug a
|||| |||||| |||||| |||  |||| || g
augA AUGGGU GUACCA CGA  AGug au u
    A      C      C   -A    g  g 


mirna_id: mmu-mir-743a
hairpin:
--  g       A      C  G    guuu 
  cu UAUUCAG UUGGUG CU UCAU    a
  || ||||||| |||||| || ||||     
  gA AUGAGUC AACCAC GA AGua    u
au  G       G      A  A    agaa 


mirna_id: osa-MIR810a
hairpin:
aauauuc   a      c    A     C                        aaua                             c                             -   u 
       acu ugguug caUC UAAGC CACCACAUGUGGcucgcaugcuua    acuaacggcauaauuagaucacuugauga gacguauaucgguguucgcuauauauacu auc a
       ||| |||||| |||| ||||| ||||||||||||||||||||||||    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  
       uga accagc guag auucg gugguguacaccgagcguacgaau    ugauugccguauuaauuuagugaacuacu cugcguauagccacaagcgauauauauga ugg c
--uuguu   c      a    c     a                        ----                             a                             a   u 


mirna_id: osa-MIR812a
hairpin:
        cc                uuacacu    auc     a                          uuu       uuacu       ---uu    -      g      c  g 
accuccgu  caaaauaagugcaguu       auuc   uccaa guuugaucguucgucuuauuugaaaa   uuuauga     auuuuua     guua uuacau auaaaa au a
||||||||  ||||||||||||||||       ||||   ||||| ||||||||||||||||||||||||||   |||||||     |||||||     |||| |||||| |||||| || a
uggaggca  guuuuauucacgucgg       uagg   AGGUU CAAAUUGGCAGGCAGaauaaacuuuu   aaauacu     uaaaaau     uaau agugug uauuuu ug u
        aa                -cacuuu    caC     G                          --u       ---uu       uuuuu    c      -      a  a 


mirna_id: osa-MIR812b
hairpin:
    c   a    -                               --    aaagauuaaaaaaauagucacgcauaaaguaaua 
guau cgu ucua cguuugaccguucgucuuauuugaaaauuuu  auga                                  u
|||| ||| |||| |||||||||||||||||||||||||||||||  ||||                                  u
caua gca AGGU GCAAAUUGGCAGGCAGaauaaacuuuuaaaa  uacu                                  c
    a   C    U                               au    aaucauaaaaauaacaauaaucuacuauuuugua 


mirna_id: osa-MIR812c
hairpin:
        c                   a      u   aaaaaauuaaaaacauaagucaugcauaaaauauuauucaug 
gguuuccg gucuaauguuugaccgucc ucuuau uga                                          u
|||||||| ||||||||||||||||||| |||||| |||                                           
ccaaaggc CAGGUUGCAAAUUGGCAGG AGaaua auu                                          u
        a                   C      u   aaaaaaaaauacuaaccacaauaauaauaacaauuuacuauu 


mirna_id: osa-MIR812d
hairpin:
   a      a       a    c      cgaaaaa     aaaaaaaaacaagucacgcauaaaguauuauuc 
cgu uccaac uuugauc ucug cuuauu       uuuau                                 a
||| |||||| ||||||| |||| ||||||       |||||                                 u
gca AGGUUG AAAUUGG AGGC Gaauaa       aaaua                                 g
   C      C       C    A      augaaaa     cuaaucauaaaaauaacaagaauauacuauuuu 


mirna_id: osa-MIR812e
hairpin:
     a   c     -                             uuuauuacuauuuuuauuguuauuagaugauaaaauaua 
guuuu gug ccaac uuugaccguccgucuuauuugaaaauuuu                                       a
||||| ||| ||||| |||||||||||||||||||||||||||||                                       a
caaag caC GGUUG AAAUUGGCAGGCAGaauaaauuuuuaaaa                                       u
     g   A     C                             uacuuuaaaaaaauuuuuaauucagugcguacuucauua 


mirna_id: osa-MIR814a
hairpin:
  c   u      cga                              u 
ac uag accgga   gaCACUUCAUAGUACAACGAAUCUggacag a
|| ||| ||||||   |||||||||||||||||||||||||||||| a
ug auc uggccu   cugugaaguaucauguugcuuagaccuguc g
  a   c      aua                              c 


mirna_id: osa-MIR814b
hairpin:
                C                gga 
accggacgagaCACUU AUAGUACAACGAAUCU   c
|||||||||||||||| ||||||||||||||||    
uggucugcucugugaa uaucauguugcuuaga   a
                a                agu 


mirna_id: osa-MIR814c
hairpin:
   ag   u       C      C              - g 
acc  aug gaCACUU AUAGUA AACGAAUCUggaca g a
|||  ||| ||||||| |||||| |||||||||||||| |  
ugg  uau cugugaa uaucau uugcuuaggccugu c a
   cu   c       a      a              a g 


mirna_id: osa-MIR815a
hairpin:
         a   -     uu        -a     a   c 
uuuuuuuag cuc uuaau  cuuuuucu  ggaug acu u
||||||||| ||| |||||  ||||||||  ||||| ||| u
agagGGGUU GAG AGUUA  GGAAgagg  uuugu ugg a
         A   G     GG        ag     g   g 


mirna_id: osa-MIR815b
hairpin:
                          a              u  uu       cuc      ag c 
cuaaugguucaccucguuuugcguau uucccaaucuucuc au  ccuucuc   aaacac  c u
|||||||||||||||||||||||||| |||||||||||||| ||  |||||||   ||||||  |  
gauuaccgaguggagcaaaaugcaua aaGGGUUAGAGGAG UA  GGAAgag   uuugug  g g
                          g              U  GG       ---      -a g 


mirna_id: osa-MIR815c
hairpin:
      -c       --      c a      cauuuagccggcuuauagcc 
cuucuc  ucucuuc  ucuccu c ccucag                    u
||||||  |||||||  |||||| | ||||||                     
gaaGGG  AGAGGAG  AGGGGA g ggaguu                    a
      UU       UU      A a      ugugugggaaucuccuucau 


mirna_id: osa-MIR816
hairpin:
               C   A      c        a a 
auGUGACAUAUUUUA UAC ACgaau uggauaug c g
||||||||||||||| ||| |||||| |||||||| |  
uacacuguguaggau aug ugcuua auuuguau g a
               u   a      a        - g 


mirna_id: osa-MIR817
hairpin:
          a             u              a 
uaucucaauc ggccucaaguugg guccgucauggaug u
|||||||||| ||||||||||||| |||||||||||||| g
auagAGUUAG CCGGAGUUCAACC cgggcagugccuac g
          C             U              u 


mirna_id: osa-MIR818a
hairpin:
     -  a                    -   aau            c    u         c      aa 
ucccu cc ucccauaguauaagggauuu ggg   gaugugacauau cuag auaaugaau uggaca  c
||||| || |||||||||||||||||||| |||   |||||||||||| |||| ||||||||| ||||||  c
aggga GG AGGGUAUUAUAUUCCCUAAa cuc   cuacacugugua gauc uguuacuua accugu  g
     a  C                    a   -au            u    c         a      cu 


mirna_id: osa-MIR818b
hairpin:
                    a      a             c  cuc      au 
ccuccgucccauaauauaag gauuuu gauggaugugaua au   aguaca  g
|||||||||||||||||||| |||||| ||||||||||||| ||   ||||||  a
ggaGGCAGGGUAUUAUAUUC CUAAaa cuaccuauacuau ua   ucaugu  a
                    C      c             a  aua      cu 


mirna_id: osa-MIR818c
hairpin:
        c     u                        a             auccuagcuauaaccauauaucuagacauagcua 
auaauaua ucauu cguccuauaauauaagggauuuug agggaugugacac                                  g
|||||||| ||||| |||||||||||||||||||||||| |||||||||||||                                  g
uauuguau aguaG GCAGGGUAUUAUAUUCCCUAAaac ucucuauauugug                                  a
        a     -                        c             uauauagaucuguucucguacagaucuauauaca 


mirna_id: osa-MIR818d
hairpin:
u     uu     u          a                          g       cuaga    u 
 uccua  aauug uacucucucc ucccauaauauaagggauuuuagagg augugau     uucg a
 |||||  ||||| |||||||||| |||||||||||||||||||||||||| |||||||     |||| g
 aggau  uugau augagggaGG AGGGUAUUAUAUUCCCUAAaaucucc uacacua     gagc u
a     --     c          C                          a       caaag    c 


mirna_id: osa-MIR818e
hairpin:
  -                                 c   cac               c         uuuuuuuuggaauuauuauuauuuuugacuuauuuuauuaucca 
cc ccguccuauaauauaagggauuuugaguuuuug uug   uguuugaccacucgu uuauuuaaa                                            a
|| ||||||||||||||||||||||||||||||||| |||   ||||||||||||||| |||||||||                                             
gg GGCAGGGUAUUAUAUUCCCUAAaauucaaaaac aac   acaaacuggugagca aauaaguuu                                            a
  a                                 a   aua               a         uuuaaacauguuuauauuuuuugcuuuucaauacgaauuucaug 


mirna_id: osa-MIR820a
hairpin:
u c    G    G          A     -  a  a           u    u   a     au            cg     a  gu      a 
 g gUCG CCUC UGGAUGGACC Ggagc uc ac uuccuuaaggu guuc uuc aaccc  acaagguuccac  ccugc uu  uccaag g
 | |||| |||| |||||||||| ||||| || || ||||||||||| |||| ||| |||||  ||||||||||||  ||||| ||  |||||| u
 c cagc ggag accugccugg ccucg ag ug aaggaauuccg caag aag uuggg  uguuccaaggug  ggaug aa  agguuc g
a u    a    g          a     u  c  -           u    c   g     au            aa     a  gu      u 


mirna_id: osa-MIR820b
hairpin:
guaca       G               AG    -     g           c    u        cau            cg     -a    u     a 
     ugcgUCG CCUCGUGGAUGGACC  gagc ucgac uuccuuaaggc guuc uuccgacc   acaagguuccgu  ccugc  uugu ccaag g
     ||||||| |||||||||||||||  |||| ||||| ||||||||||| |||| ||||||||   ||||||||||||  |||||  |||| ||||| u
     acgcagc ggagcaccugccugg  uucg agcug aaggaauuccg caag aaggcugg   uguuccaaggug  ggacg  agca gguuc g
gaucg       a               au    u     -           u    c        aau            aa     aa    -     u 


mirna_id: osa-MIR820c
hairpin:
u      G               A     -     a           c    u        cau             g     -a    u     a 
 gcgUCG CCUCGUGGAUGGACC Ggagc ucgac uuccuuaaggu guuc uuccgacc   acaagguuccgcu ccugc  uugu ccaag g
 |||||| ||||||||||||||| ||||| ||||| ||||||||||| |||| ||||||||   ||||||||||||| |||||  |||| ||||| u
 cgcagc ggagcaccugccugg ccucg agcug aaggaauuccg caag aaggcugg   uguuccaagguga ggacg  aaca gguuc g
a      a               a     u     -           u    c        aau             a     aa    -     u 


mirna_id: osa-MIR821a
hairpin:
   a    c                  A                          a            gg c          ac   a     a      c            a  g      cucuuauc     u 
gau ucag ugaaaAAGUCAUCAACAA AAAGUUGAAUaacucaucaagaucua aacuuuuauuuu  u auuucuucau  gac aagug uaguaa auuguucacaga uu acauau        ugguu u
||| |||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||  | ||||||||||  ||| ||||| |||||| |||||||||||| || ||||||        ||||| a
cua aguu acuuuuucaguaguuguu uuucaacuuauugaguaguucuagau uugaaaauaaaa  a uaaagaagua  cug uuuac aucauu uaauaaguguuu aa uguaua        aucaa u
   a    a                  g                          a            aa -          ga   c     a      a            a  a      uacacaau     a 


mirna_id: osa-MIR821b
hairpin:
         u                       A               a                     uuu             c       a  uua           cacaaauuuuacauauauguguuaaaguuu 
cuaaaugau ucaauugaaaAAGUCAUCAACAA AAAGUUGAAUaacuu ucaagaucuaaaacuuuuauu   guuauuucuucau cgacgaa ug   guaauauuauu                              a
||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||   ||||||||||||| ||||||| ||   |||||||||||                              u
gauuuacua aguugacuuuuucaguaguuguu uuucaacuuauugag aguucuagauuuugaaaauaa   caauaaagaagua gcuguuu ac   cauuguaauaa                              a
         u                       g               a                     cac             u       c  uac           auauuuuaacaguauagagaauagaccaaa 


mirna_id: osa-MIR821c
hairpin:
    c                  A                    c                  g   a         ac         a   u  c            a  g     acucuuauc     u 
ucaa ugaaaAAGUCAUCAACAA AAAGUUGAAUaacucaucaa aucuaaaacuuuuauuuu guu uuucuucau  gacaaagug uag aa auuauucacaaa uu acaua         ugguu u
|||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| ||| |||||||||  ||||||||| ||| || |||||||||||| || |||||         ||||| a
aguu acuuuuucaguaguuguu uuucaacuuauugaguaguu uagauuuugaaaauaaaa caa aaagaagua  cuguuuuac auc uu uaauaaguguuu aa uguau         aucaa u
    a                  g                    c                  a   c         ga         a   -  u            a  a     auacacaau     a 


mirna_id: mdo-mir-1
hairpin:
-       c                     ac     ugaaca 
 accuacu agaguacauacuucuuuaugu  ccaua      u
 ||||||| |||||||||||||||||||||  |||||       
 uggaugg uuuuAUGUAUGAAGAAAUGUA  GGUau      a
g       u                     -A     cguaac 


mirna_id: mdo-mir-7
hairpin:
uuggccuaguucugugU  A     A       U      --     a 
                 GG AGACU GUGAUUU GUUGuu  uuuag u
                 || ||||| ||||||| ||||||  |||||  
                 cc ucuga cacuaaa caacag  aaauc a
-----------------  g     -       -      ca     a 


mirna_id: mdo-mir-9-2
hairpin:
g    u     g   UC               G      ug a 
 gaag gaguu uua  UUUGGUUAUCUAGCU UAUGAg  u u
 |||| ||||| |||  ||||||||||||||| ||||||  |  
 cuuc cucaa aaU  AAGCCAAUAGAUCGA AUacuu  g u
a    -     a   GA               A      cu g 


mirna_id: mdo-mir-9-1
hairpin:
c    cc       -  C               G     gu   a 
 gagg  cguuucu cU UUUGGUUAUCUAGCU UAUGA  guu u
 ||||  ||||||| || ||||||||||||||| |||||  |||  
 cuuu  guaaaga GA AAGCCAAUAGAUCGA AUacu  cga u
a    ca       U  -               A     au   g 


mirna_id: mdo-mir-10a
hairpin:
-c    uu        A    G     C          uaaggaa 
  uguc  cuguauaU CCCU UAGAU CGAAUUUGUG       u
  ||||  |||||||| |||| ||||| ||||||||||        
  acag  gauguaua gggg aucua gcuuaaacac       u
au    uu        a    -     u          ugguguu 


mirna_id: mdo-mir-10b
hairpin:
ca   u   a  a     u        A    G     C          ---ug  a 
  gaa guu uu cguug cuauauAU CCCU UAGAA CGAAUUUGUg     gu u
  ||| ||| || ||||| |||||||| |||| ||||| ||||||||||     ||  
  cuu caa aa guagc gguauaua gggg aucuu gcuuagacac     ca u
ca   -   a  c     u        a    -     a          ugaua  u 


mirna_id: mdo-mir-21
hairpin:
--                A     A     A    ugg 
  ugucggaUAGCUUAUC GACUG UGUUG cugu   a
  |||||||||||||||| ||||| ||||| ||||    
  acagucugucgaguag cugac acaac ggua   u
uu                -     g     -    cuc 


mirna_id: mdo-mir-22
hairpin:
cc    ca              -    g       u u  ug 
  gagc  cagcaguucuucag uggc agcuuua g cu  u
  ||||  |||||||||||||| |||| ||||||| | ||   
  cucg  guCGUCAAGAAGUU ACCG UCGAAau c ga  c
gu    -a              G    -       - -  cc 


mirna_id: mdo-mir-30a
hairpin:
                UC           g gaagc 
gcggcUGUAAACAUCC  GACUGGAAGcu u     a
||||||||||||||||  ||||||||||| |      
cgucgacguuuguagg  cugacuuucgg g     g
                --           g uagac 


mirna_id: mdo-mir-31
hairpin:
a    --------     GA     G             -U   gaa 
 gcug        gagaG  GGCAA AUGUUGGCAUAGC  Guu   c
 ||||        |||||  ||||| |||||||||||||  |||    
 cgac        cuuuc  ccguu uacaaccguaucg  caa   u
a    uaucuguu     ua     a             uc   gag 


mirna_id: mdo-mir-32
hairpin:
g       UG     U            -guu  c 
 gagaUAU  CACAU ACUAAGUUGCau    gu a
 |||||||  ||||| ||||||||||||    ||  
 uuuuaua  gugua ugauuuaacgug    cg c
-       gu     -            auuu  g 


mirna_id: mdo-mir-34a
hairpin:
-    -   --    -  ug     uU        -   A          gugaguaa 
 ggcc agc  ugug ag  uuucu  GGCAGUGU CUU GCUGGUUGUU        u
 |||| |||  |||| ||  |||||  |||||||| ||| ||||||||||         
 ccgg uug  gcac uc  gaaga  ccgucaua gaa cgacuaacga        a
c    a   uu    g  gu     uc        u   -          aggaauag 


mirna_id: mdo-mir-100
hairpin:
    -uu c    A   CG    UC   A      g  au 
ccug   g caca ACC  UAGA  CGA CUUGUg ug  a
||||   | |||| |||  ||||  ||| |||||| ||   
ggac   c gugu ugg  aucu  guu gaacac ac  u
    ugu u    a   au    gu   c      -  cu 


mirna_id: mdo-mir-101-2
hairpin:
  ug  c                    c a    guaua 
ac  uc uuuuucgguuaucaugguac g ugcu     u
||  || |||||||||||||||||||| | ||||      
ug  gg aaGAAGUCAAUAGUGUCAUG C AUgg     g
  gu  u                    A -    aaagu 


mirna_id: mdo-mir-101-1
hairpin:
a       cuggc                  a    guccg 
 ggcugcc     ucaguuaucacagugcug ugcu     u
 |||||||     |||||||||||||||||| ||||      
 ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
a       uagGA                  -    aacuc 


mirna_id: mdo-mir-103-1
hairpin:
--u       --    u  u           c   u g a 
   ugucuuc  ggcu cu uacagugcugc uug u c u
   |||||||  |||| || ||||||||||| ||| | |  
   acagaAG  UCGG GA AUGUUACGACG Aac a g a
guu       UA    -  C           -   u g u 


mirna_id: mdo-mir-103-2
hairpin:
--      g      --   u  u           c   uu   u 
  cuuggu cuuuca  gcu cu uacagugcugc uug  gca u
  |||||| ||||||  ||| || ||||||||||| |||  |||  
  gaacca gaaAGU  CGG GA AUGUUACGACG Aac  ugu g
ua      a      AU   -  C           -   --   a 


mirna_id: mdo-mir-107
hairpin:
cu   uuc      --c    u  c           c   u   g 
  ucu   ugcuuu   ggcu cu uacaguguugc uug ggc u
  |||   ||||||   |||| || ||||||||||| ||| ||| g
  aga   acgaaA   UCGG GA AUGUUACGACG Aac uug g
--   --u      CUA    -  C           -   -   a 


mirna_id: mdo-mir-122
hairpin:
-   -      GG       C           UGUcc 
 cag agcuaU  AGUGUGA AAUGGUGUUUG     a
 ||| ||||||  ||||||| |||||||||||      
 guc ucgaua  ucacacu uuaccgcaaac     g
u   a      aa       a           uaucu 


mirna_id: mdo-mir-124a-1
hairpin:
a      uc   cc        a   ga        uaaau 
 ggccuc  ucu  guguucac gcg  ccuugauu     g
 ||||||  |||  |||||||| |||  ||||||||     u
 ucgggg  aga  CGUAAGUG CGC  GGAAUUaa     c
g      ua   AC        G   AC        cauac 


mirna_id: mdo-mir-124a-2
hairpin:
-a    a a     u    cc        a   ga        uaau 
  ucag g cucug cucu  guguucac gcg  ccuugauu    g
  |||| | ||||| ||||  |||||||| |||  ||||||||    u
  aguc c gaggc gaga  CGUAAGUG CGC  GGAAUUaa    c
aa    - -     -    AC        G   AC        caua 


mirna_id: mdo-mir-124a-3
hairpin:
    - c        a   ga        uaaug 
cucu g guguucac gcg  ccuugauu     u
|||| | |||||||| |||  ||||||||      
gaga C CGUAAGUG CGC  GGAAUUaa     c
    A -        G   AC        cauau 


mirna_id: mdo-mir-125b-1
hairpin:
a   uu     UC  UG   C   A       ----Ag   u 
 cuu  ccuag  CC  AGA CCU ACUUGUG      gcu u
 |||  |||||  ||  ||| ||| |||||||      |||  
 gag  ggauc  gg  ucu gga uggacac      cga u
g   gc     ca  gu   c   c       caacag   c 


mirna_id: mdo-mir-125b-2
hairpin:
aa    U    C           Au     c 
  UCCC GAGA CCUAACUUGUG  guuua c
  |||| |||| |||||||||||  ||||| g
  aggg uucu ggauugggcac  uaaau u
cg    -    c           -c     u 


mirna_id: mdo-mir-128
hairpin:
ugu        a          uua      ca    g gag 
   gcagcagg aggggggccg   cacugu  gaga u   u
   |||||||| ||||||||||   ||||||  |||| |    
   ugucgucc UUUCUCUGGC   GUGACA  CUcu g   a
cgg        c          CAA      --    g acg 


mirna_id: mdo-mir-129
hairpin:
     -       C   CU      G   -  c  ua 
uggau CUUUUUG GGU  GGGCUU CUg uu cu  a
||||| ||||||| |||  |||||| ||| || ||   
aucua gaaaaac cca  cccgaa gac ga ga  a
     u       c   uu      g   u  u  cu 


mirna_id: mdo-mir-130a
hairpin:
u      a        c      ug  a   ucugca 
 ggccag gcucuuuu acauug  cu cug      c
 |||||| |||||||| ||||||  || |||       
 ucgguU CGGGAAAA UGUAAC  GA gau      c
g      A        A      GU  C   cacuau 


mirna_id: mdo-mir-133a
hairpin:
-      uuu    a       aa  u  a        accua 
 caaugc   gcua agcuggu  aa gg accaaauc     u
 ||||||   |||| |||||||  || || ||||||||      
 guuacg   cgaU UCGACCA  UU CC UGGUUuag     u
a      uau    G       AC  C  C        guaac 


mirna_id: mdo-mir-135a
hairpin:
a    aa     ucua    c           U            u g a 
 gaua  uucac    gugu uUAUGGCUUUU AUUCCUAUGUGA a u a
 ||||  |||||    |||| ||||||||||| |||||||||||| | | u
 cugu  aagug    caua aguaccgaagg uagggauguacu u a a
a    -a     -uua    a           -            c g a 


mirna_id: mdo-mir-135b
hairpin:
---a       ----g                  CAU          -   cu 
    gcucucu     cuguggccUAUGGCUUUU   UCCUAUGUGa uug  g
    |||||||     ||||||||||||||||||   |||||||||| |||  u
    cgagagg     gacaucggguaccgaaaa   gggauguacu aac  u
ccuc       ggagg                  -uc          c   cc 


mirna_id: mdo-mir-137
hairpin:
-----------------      ug a     -  g 
                 cuuggg  g uaaua cg a
                 ||||||  | ||||| || u
                 GAAUUC  U AUugu gc u
ggagcuGAUGCGCAUAA      GU -     u  a 


mirna_id: mdo-mir-138
hairpin:
- u   u  AG       U     UCa     acaagcagcu 
 g ugc gc  CUGGUGU GUGAA   ggccg          c
 | ||| ||  ||||||| |||||   |||||           
 c acg ug  gaccaca cacuu   ucggc          a
a u   u  -g       u     -ua     ccauuauccu 


mirna_id: mdo-mir-142
hairpin:
g  g   c           a         ---ua   g 
 ca uca ccauaaaguag aagcacuac     aca c
 || ||| ||||||||||| |||||||||     |||  
 gu agu GGUAUUUCAUC UUUGUGAUG     ugu a
-  g   A           C         Uggga   a 


mirna_id: mdo-mir-143
hairpin:
      g         g      u  -   g 
cccgag ugcagugcu caucuc gg uca u
|||||| ||||||||| |||||| || |||  
ggGCUC AUGUCACGA GUAGAG cu agu u
      G         A      U  g   g 


mirna_id: mdo-mir-144
hairpin:
c  -     ag     g        g         -a    gc 
 gg ggccc  gccgg auaucauc uauacugua  guuu  a
 || |||||  ||||| |||||||| |||||||||  ||||   
 cc ccggg  cGGUC UGUAGUAG AUAUGACAU  caga  a
u  g     ag     A        -         ca    gu 


mirna_id: mdo-mir-451
hairpin:
----cu      gA    G            U 
      ggcggg  AACC UUACCAUUACUG G
      ||||||  |||| ||||||||||||  
      ucgccc  uugg aaugguaaugau U
gucgcg      uc    g            U 


mirna_id: mdo-mir-145
hairpin:
       UC    U  C            uagau 
cucaggG  CAGU UU CCAGGAAUCCCU     g
|||||||  |||| || ||||||||||||     c
gaguucu  guca aa gguccuuagggg     u
       -u    u  a            uagaa 


mirna_id: mdo-mir-152
hairpin:
  c              g  a    cc    ua a  c 
cc ggcccagguucugu au cacu  gacu  g cu u
|| |||||||||||||| || ||||  ||||  | ||  
gg ucGGGUUCAAGACA UA GUGA  CUga  c ga g
  u              G  C    --    -- -  g 


mirna_id: mdo-mir-182
hairpin:
gcugugU       U -G      UCA      ugagau 
       UUGGCAA G  UAGAAC   CAcugg      a
       ||||||| |  ||||||   ||||||       
       aaccguu c  aucuug   guggcc      a
----auc       - ag      ---      uaaggu 


mirna_id: mdo-mir-184
hairpin:
c       auc         c      a c     uuucua 
 cagucac   cccuuauca uuuucc g ccagc      a
 |||||||   ||||||||| |||||| | |||||      u
 guuagug   GGGAAUAGU AAGAGG C GGUug      g
a       gaU         C      - A     uuaauc 


mirna_id: mdo-mir-187
hairpin:
au    aga         a                a c  u 
  ugug   ccucuggcu caacacaggacacggg g uu u
  ||||   ||||||||| |||||||||||||||| | ||  
  acac   ggagaCCGA GUUGUGUUCUGUGCUc c ag c
--    -gg         C                c a  u 


mirna_id: mdo-mir-181c
hairpin:
ug    AA         CU       A     --ag a 
  gggg  CAUUCAACG  GUCGGUG GUuug    c g
  ||||  |||||||||  ||||||| |||||    |  
  cccc  gugaguugc  cagcuac caaac    g c
-g    ag         --       -     ggaa u 


mirna_id: mdo-mir-186
hairpin:
acc             U     U     Uuu   u 
   uucCAAAGAAUUC CCUUU GGGCU   gau c
   ||||||||||||| ||||| |||||   ||| u
   aggguuuuuuaag ggaaa cccga   uua u
---             u     -     -cu   a 


mirna_id: mdo-mir-193
hairpin:
          u          g  a    ggu 
gaggauuggg cuuugugggc ag ugag   g
|||||||||| |||||||||| || ||||    
cucuuGACCC GAAACAUCCG UC Acuu   u
          U          G  A    gac 


mirna_id: mdo-mir-196b
hairpin:
-      ucu     uU       U  C           cucc 
 aacugg   gugau  AGGUAGU UC UGUUGUUGGgg    a
 ||||||   |||||  ||||||| || |||||||||||    c
 uugacu   cauua  uccguca ag acgacagcucu    c
g      --u     cu       u  c           cuuu 


mirna_id: mdo-mir-199b
hairpin:
-c    cu  -     C       U       U    U   gacu 
  ucca  cc gucua CCAGUGU UAGACUA CUGU Cag    c
  ||||  || ||||| ||||||| ||||||| |||| |||     
  gggu  gg cggau gguuaca gucugau gaca guu    c
uc    cg  u     u       c       -    u   auaa 


mirna_id: mdo-mir-203
hairpin:
agcug   u    c         u    g    a    -   g 
     ccc gguc agugguucu aaca uuca cagu ucu u
     ||| |||| ||||||||| |||| |||| |||| |||  
     ggg cuaG UCACCAGGA UUGU AAGU Guua aga g
-----   u    U         U    A    -    g   u 


mirna_id: mdo-mir-204
hairpin:
caacu   uaugu   cug     U         CA    A     g aaa 
     gac     gac   ugggc UCCCUUUGU  UCCU UGCCU g   u
     |||     |||   ||||| |||||||||  |||| ||||| |   c
     cug     cug   acucg agggaaacg  aggg acggg u   a
--cuu   -----   ucg     u         ac    -     g gag 


mirna_id: mdo-mir-206
hairpin:
------     a                cc     ugaau 
      gaggc acaugcuucuuuauau  ccaua     u
      ||||| ||||||||||||||||  |||||     a
      cuuug UGUGUGAAGGAAUGUA  GGUau     u
gaaggg     G                -A     cgucg 


mirna_id: mdo-mir-208
hairpin:
uuccugu   ag          g uc  gg      - uga 
       gac  gugagcuuuu g  cg  uuauac c   u
       |||  |||||||||| |  ||  |||||| |    
       cug  UGCUCGAAAA C  GC  AAUAug g   g
------g   gu          A GA  AG      u uac 


mirna_id: mdo-mir-214
hairpin:
gggcu      acgga           u          aca            aacau 
     ggcugg     guugucaugug cugccugucu   cuugcugugcag     c
     ||||||     ||||||||||| ||||||||||   ||||||||||||     c
     ccgacc     caacaguacac GACGGACAGA   GGACGACAuguc     u
----u      -----           u          CAC            cacuc 


mirna_id: mdo-mir-216
hairpin:
--gaug   g  aa     u         CU   A        -au   a 
      gcu ug  uuggc UAAUCUCAG  GGC ACUGUGag   guu a
      ||| ||  ||||| |||||||||  ||| ||||||||   |||  
      cga ac  aaucg auuaggguc  cug ugacacuc   uaa u
cuuuaa   g  -a     u         -u   g        ccu   a 


mirna_id: mdo-mir-217
hairpin:
uu     c u  a  C     C          U  AUaaua 
  gaugu g ag UA UGCAU AGGAACUGAU GG      u
  ||||| | || || ||||| |||||||||| ||       
  cuacg c uc gu acgua uccuugacua cc      u
-u     a u  c  u     a          -  acggac 


mirna_id: mdo-mir-218
hairpin:
---u  uuau  g   a   u      U         CU        gguugugag 
    ga    gu gcg gau uucugU GUGCUUGAU  AACCAUGU         g
    ||    || ||| ||| |||||| |||||||||  ||||||||          
    cu    cg cgc cug aaggua cacgaacug  uugguaca         u
acau  --uu  a   a   c      c         uc        aaaugagua 


mirna_id: mdo-mir-219
hairpin:
ca       c     U   U     AA           ------    a 
  gggguuc gccgc GAU GUCCA  CGCAAUUCUug      ugcg g
  ||||||| ||||| ||| |||||  |||||||||||      ||||  
  ccucgag cggug cua caggu  guguuaagagc      acgu u
--       u     u   -     cg           caaccg    c 


mirna_id: mdo-mir-223
hairpin:
ucuggcccagauccuuca     a    cc u                ---g   -       
                  gugcc cacu  g guauuugacaagcuga    uug gacacu 
                  ||||| ||||  | ||||||||||||||||    ||| ||||| c
                  uacgg guga  C CAUAAACUGUUUGACU    gau cugugc 
----------gauccguu     a    aC C                GUga   g       


mirna_id: mdo-mir-338
hairpin:
----    u     cc      u   -         agugagcggc 
    ggcc uccuc  caacaa auc cugaugcug          a
    |||| |||||  |||||| ||| |||||||||           
    ucgg gggag  GUUGUU UAG GACUACGAC          c
accg    u     aA      U   U         CUcagaggua 


mirna_id: mdo-mir-365
hairpin:
cc      aa        ac           ----   -    uu 
  gcaggg  aaugaggg  uuuugggggca    gau gugu  c
  ||||||  ||||||||  |||||||||||    ||| ||||  c
  cguucu  uUAUUCCU  AAAAUCCCCGU    cua caca  a
ga      cg        -A           AAUa   u    uu 


mirna_id: mdo-mir-375
hairpin:
-  -     c     ccu  c     c  gac 
 cc cgcgc gagcc   cg acaaa cg   c
 || ||||| |||||   || ||||| ||    
 gg GUGCG CUCGG   GC UGUUU gc   u
c  A     -     CUU  U     U  gag 


mirna_id: mdo-mir-383
hairpin:
----cucA      AA      U      -   g  a 
        GAUCAG  GGUGAU GUGGCU uuc gu g
        ||||||  |||||| |||||| ||| ||  
        cugguc  ucacua caccga aag ua a
gagaaaga      gg      -      c   g  c 


mirna_id: mdo-mir-449
hairpin:
u ug             -    U          ugacua 
 g  augggaUGGCAGU GUAU GUUAGCUGGU      u
 |  ||||||||||||| |||| ||||||||||      c
 c  uacccuaucguca cgua caaucgaccg      u
a gu             a    -          ugcaag 


mirna_id: mdo-let-7a-2
hairpin:
-   uU   G   U             uagaa ua a 
 agg  GAG UAG AGGUUGUAUAGUU     u  c u
 |||  ||| ||| |||||||||||||     |  | c
 ucc  uuc auc uccgacaugucaa     a  g a
u   -u   g   c             --uag gg a 


mirna_id: mdo-mir-15a
hairpin:
     ggguaaa UA        UA         Uggu   g 
ccuug       g  GCAGCACA  AUGGUUUGU    uuu a
|||||       |  ||||||||  |||||||||    |||  
ggaac       c  cgucgugu  uaccggacg    gga a
     auaaaaa uc        ua         ---u   a 


mirna_id: mdo-mir-16
hairpin:
-      ag   c          -  A        CGuua    uuu 
 gucaac  ugc uUAGCAGCAC GU AAUAUUGG     agau   a
 ||||||  ||| |||||||||| || ||||||||     ||||   a
 cgguug  aug agucgucgug ca uuaugacc     ucua   a
c      ga   a          u  a        -----    uga 


mirna_id: mdo-mir-183
hairpin:
-a   c        g      --AC     GA        ugaaaa 
  cuc uguucugu UAUGGC    UGGUA  AUUCACUG      c
  ||| |||||||| ||||||    |||||  ||||||||       
  gag acgagaca auaccg    accau  uaagugac      a
aa   -        a      ggaa     --        uaucac 


mirna_id: mdo-mir-96
hairpin:
gau    -    gg     U         G     UU      -cu  cu 
   gucu gcuu  cccgu UUGGCACUA CACAU  UUGCUu   gu  c
   |||| ||||  ||||| ||||||||| |||||  ||||||   ||   
   uaga cgaa  gggua aaccgugau gugua  aacgag   cg  u
--g    a    aa     u         -     cu      ucu  uc 


mirna_id: mdo-mir-212
hairpin:
    -  c   c   -ca  u     cu      c      ccc     
gggc ag gcg cgg   cc uggcu  agacug uuacug   gggc 
|||| || ||| |||   || |||||  |||||| ||||||   ||| c
cccg uc cgc gcc   GG ACUGA  UCUGAC AAUgac   ccca 
    g  -   a   aCC  C     CC      -      --u     


mirna_id: mdo-mir-132
hairpin:
    a         uuc          g g g 
gggc accguggcu   gauuguuacu u g a
|||| |||||||||   |||||||||| | |  
cccG UGGUACCGA   CUGACAAUgg g c a
    C         CAU          g a c 


mirna_id: mdo-mir-200c
hairpin:
  -     -      a        u   -ug  g 
cc ccauc uuaccc gcaguguu ggg   cc c
|| ||||| |||||| |||||||| |||   || u
gg GGUAG AAUGGG CGUCAUAA cuc   gg c
  a     U      C        U   uga  g 


mirna_id: mdo-mir-141
hairpin:
ug    c     --    u      g    u  u 
  gggc aucuu  ccag acagug ugga gg g
  |||| |||||  |||| |||||| |||| || a
  ccCG UAGAA  GGUC UGUCAC AUcu uc a
--    -     AU    -      A    -  g 


mirna_id: mdo-mir-191
hairpin:
      C          C  AA       uu  -  c 
agcggg AACGGAAUCC AA  GCAGCUg  gu cu c
|||||| |||||||||| ||  |||||||  || ||  
ucgucc uugcuuuagg uu  cgucgac  ua ga a
      c          -  aa       cu  c  g 


mirna_id: mdo-mir-425
hairpin:
    u  u     au        cac     u  a  ggaca 
aaag gc uugga  gacacgau   ucccg ug gc     g
|||| || |||||  ||||||||   ||||| || ||     c
uuuc cg aaCCU  CUGUGCUA   AGGGC Ac cg     c
    u  u     GC        -UA     U  -  aagaa 


mirna_id: mdo-mir-181a
hairpin:
ugA   U      CU       A    ggaau 
   ACA UCAACG  GUCGGUG GUuu     u
   ||| ||||||  ||||||| ||||     a
   ugu aguugc  cagcuac caaa     a
cca   u      --       -    aguaa 


mirna_id: mdo-mir-181b
hairpin:
----aa       aucAA         CUG           aa  g 
      ggucaca     CAUUCAUUG   UCGGUGGGuuu  cu u
      |||||||     |||||||||   |||||||||||  ||  
      ccggugu     guaaguaac   agucacucgaa  gg a
uucacc       -caac         --a           ca  u 


mirna_id: mdo-mir-200b
hairpin:
--------c    -    ug     c      uggug 
         cauc uuac  ggcag auugga     u
         |||| ||||  ||||| ||||||     c
         GUAG AAUG  CCGUC UAAUcu     u
gggguaguA    U    GU     A      uugug 


mirna_id: mdo-mir-200a
hairpin:
  --g     g        -             C    uuuuu 
gg   ccucu ugggCAUC UUACUAGACAGUG UGGA     g
||   ||||| |||||||| ||||||||||||| ||||     g
cc   ggaga auuUGUAG AAUGGUCUGUCAC AUcu     a
  aag     a        C             A    caugu 


mirna_id: mdo-mir-222a
hairpin:
uguagauacu u    ----uu      gcAGCUACAUCU 
          g cucu      ccauca            G
          | ||||      ||||||             
          c gaga      gguagu            G
---------u -    uucuac      CUCUGGGUCAUC 


mirna_id: mdo-mir-221
hairpin:
-  a    -  ug   u         aauu    guuua 
 gc ugaa cc  gca acaauguag    cugu     u
 || |||| ||  ||| |||||||||    ||||      
 cg aCUU GG  CGU UGUUACAUC    GAca     u
u  g    U  GU   C         ----    augaa 


mirna_id: mdo-let-7f-2
hairpin:
---    U   GU               ----  ua     ac 
   ggga GAG  AGUAGAUUGUAUAGU    Uu  ggguc  a
   |||| |||  |||||||||||||||    ||  |||||   
   cccu uuc  ucaucugacauauca    ag  ucuag  c
gca    -   ug               auag  gc     cc 


mirna_id: mdo-let-7a-3
hairpin:
g   U   GU     GU         ugggggucgcucc 
 ggg GAG  AGUAG  UGUAUAGUU             c
 ||| |||  |||||  |||||||||              
 ccc uuc  ucauc  acauaucaa             u
-   u   ug     ug         uagagugucuguc 


mirna_id: mdo-let-7b
hairpin:
gg     U                     ucaggguagugauuu 
  cgggg GAGGUAGUAGGUUGUGUGGUU               u
  ||||| |||||||||||||||||||||                
  guccc uuccgucauccaacauaucaa               g
-a     -                     uagaagacuaacccc 


mirna_id: mdo-mir-29b
hairpin:
gc           -          u      gu      uua   a 
  uucuucaggaa gcugguuuca auggug  uuagau   acu c
  ||||||||||| |||||||||| ||||||  ||||||   |||  
  aggagguucuu UGACUAAAGU UACCAC  GAUcug   uga u
--           g          U      --      ---   g 


mirna_id: mdo-mir-29a
hairpin:
            uuu       c    ucaa 
augacugauuuc   ugguguu agag    u
||||||||||||   ||||||| ||||    a
uauUGGCUAAAG   ACCACGA Ucuu    u
            UUU       -    uuac 


mirna_id: mdo-mir-17
hairpin:
    ga       -CA        A  G     G   Ugaua 
guca  auaaugu   AAGUGCUU CA UGCAG UAG     u
||||  |||||||   |||||||| || ||||| |||     g
cagu  uauuacg   UUCACGGA GU ACGUC Auc     u
    ga       AUG        A  G     -   uaaga 


mirna_id: mdo-mir-18
hairpin:
u    cU    U   UC   U    A   -  aa u 
 uguu  AAGG GCA  UAG GCAG UAg ug  g a
 ||||  |||| |||  ||| |||| ||| ||  | g
 acgg  uucc cgu  auc cguc auc ac  u a
-    uc    u   ga   c    -   u  ga u 


mirna_id: mdo-mir-19a
hairpin:
g   u  u                 --      ---    ag 
 cag cc cuguuaguuuugcauag  uugcac   uaca  a
 ||| || |||||||||||||||||  ||||||   ||||  a
 guc gg gguAGUCAAAACGUAUC  AACGUG   augu  g
-   c  u                 UA      Uug    aa 


mirna_id: mdo-mir-20
hairpin:
ugaa  ---g      uuu    c   -A                 G   -  uu 
    ag    acagcu   guag acU  AAGUGCUUAUAGUGCAG UAG ug  u
    ||    ||||||   |||| |||  ||||||||||||||||| ||| ||   
    uc    ugucga   cguc uga  uucacgaguauuacguc auc au  a
--ca  aaga      --u    a   ag                 -   u  ug 


mirna_id: mdo-mir-19b
hairpin:
g    guu                 -  -      uc    uguau 
 cacu   cuaugguuaguuuugca gg uuugca  cagc     g
 ||||   ||||||||||||||||| || ||||||  ||||     a
 gugg   ggugucAGUCAAAACGU CC AAACGU  GUcg     u
g    --u                 A  U      --    ucuua 


mirna_id: mdo-mir-92
hairpin:
---cu   uac            c   u        gu uc 
     uuc   acagguugggau agu gcaaugcu  g  u
     |||   |||||||||||| ||| ||||||||  |   
     gag   uGUCCGGCCCUG UCA CGUUAUga  u  g
gguuu   --u            U   -        ug cu 


mirna_id: mdo-let-7a-1
hairpin:
ucucca  g     U   GU                uuagggucacac 
      cu uggga GAG  AGUAGGUUGUAUAGUU            c
      || ||||| |||  ||||||||||||||||            c
      ga auucu uuc  ucaucuaacauaucaa            a
------  a     -   ug                uagagggucacc 


mirna_id: mdo-let-7d
hairpin:
----aau    u       A              C      -------uua      g 
       gggc ccuagga GAGGUAGUAGGUUG AUAGUu          gggcag g
       |||| ||||||| |||||||||||||| ||||||          |||||| a
       cucg ggauucu uuccgucguccaac uaucaa          cccguu u
uuauuau    -       -              a      uugaggaaca      u 


mirna_id: mdo-mir-23a
hairpin:
------   c     -       g    g      auua 
      cgg ugggg uuccugg gaug gauuug    c
      ||| ||||| ||||||| |||| ||||||     
      guc acCUU AGGGACC UUAC CUAaac    u
ucacca   a     U       G    A      accg 


mirna_id: mdo-mir-27a
hairpin:
u   uu a     a         ug cu        g   cag 
 ggc  g ggagc ggacuuagc  c  ugugaaca agu   c
 |||  | ||||| |||||||||  |  |||||||| |||   a
 ccg  c ccuCG CUUGAAUCG  G  ACACUUgu uua   u
-   uu c     C         GU --        g   uac 


mirna_id: mdo-mir-24-2
hairpin:
-gc       g   a         aaca     --g u 
   cuccugu ccu cugagcuga    caguu   c u
   ||||||| ||| |||||||||    |||||   |  
   gaggaca gGA GACUUGACU    GUcaa   g u
ucu       a   C         --CG     aua g 


mirna_id: mdo-mir-23b
hairpin:
      u   --          -  c      gugacu 
ggcugc ugg  guuccuggca ug ugauuu      u
|||||| |||  |||||||||| || ||||||       
ccgacg aCC  UAGGGACCGU AC ACUAaa      a
      c   AU          U  -      aguaga 


mirna_id: mdo-mir-27b
hairpin:
-a   -    gaca                  auug        ucacug 
  ccu cucu    aggugcagagcuuagccg    gugaacag      a
  ||| ||||    ||||||||||||||||||    ||||||||      u
  gga gaga    uccaCGUCUUGAAUCGGU    CACUUguu      u
gg   a    --ag                  --GA        ucuccu 


mirna_id: mdo-mir-24-1
hairpin:
ggug   a         uaa    uc  au 
    ccu cugagcuga   cagu  ug  u
    ||| |||||||||   ||||  ||   
    gGA GACUUGACU   GUca  ac  u
---a   C         -CG    -c  au 


mirna_id: mdo-mir-93
hairpin:
a    ug    g   -cA       -     U    G   u  g u 
 gucu  gggg cuc   AAGUGCU GUUCG GCAG UAG gu a a
 ||||  |||| |||   ||||||| ||||| |||| ||| || | a
 cagg  cccc gag   uucacga cgagu cguc auc ca u c
a    gu    -   acc       u     -    -   -  g c 


mirna_id: mdo-mir-25
hairpin:
g     ug   ag    g     uu g     u   g acu 
 gccag  uug  aggc gagac  g gcaau gcu a   c
 |||||  |||  |||| |||||  | ||||| ||| |   u
 cgguc  gac  UCUG CUCUG  C CGUUA Cgg u   g
-     gu   AG    G     UU A     -   g ccc 


mirna_id: mdo-mir-302b
hairpin:
ccc        uu               -   gugu 
   cuucuacu  aacauggagguacuu ucu    u
   ||||||||  ||||||||||||||| |||     
   gaggauGG  UUGUACCUUCGUGAA gga    u
--u        UU               U   aaaa 


mirna_id: mdo-mir-302c
hairpin:
--   uu             c    acgu 
  gcu  aacauggggguac ugcu    a
  |||  ||||||||||||| ||||    a
  UGA  UUGUACCUUCGUG AUga    u
gg   CU             A    aaaa 


mirna_id: mdo-mir-302a
hairpin:
c   c    u         uu          guu 
 cca uacu aaacgugga  uacuugcuuu   u
 ||| |||| |||||||||  ||||||||||   c
 ggu guGA UUUGUACCU  GUGAAUgaaa   u
-   a    U         UC          aaa 


mirna_id: mdo-mir-302d
hairpin:
--  u u    u          ug    cugugau 
  cc c gcuu aacauggaag  cuug       u
  || | |||| ||||||||||  ||||       u
  gg g UGAG UUGUACCUUC  GAAU       u
gu  u u    U          GU    uaaaaaa 


mirna_id: mdo-mir-367
hairpin:
-----           ca     -c      cu 
     acuguugcuaa  ugcaa  ucuguu  a
     |||||||||||  |||||  ||||||  u
     UGGUAACGAUU  ACGUU  Gggcaa  g
gguAG           UC     AA      au 


mirna_id: bmo-mir-31
hairpin:
------------------------guc          -c    aa   AA     C           uugaa 
                           gagccggugg  uggg  GGC  GAAGU GGCAUAGCUGu     u
                           ||||||||||  ||||  |||  ||||| |||||||||||     a
                           uucggccgcc  acuC  CCG  CUUCA CUGUGUCGGca     a
ucguaggcguuuagaacuuuaacuucu          ua    GA   AG     -           cauag 


mirna_id: bmo-mir-71
hairpin:
--------------------gcaaga     ucua  u u         U           ugucccgu 
                          ugcuc    cc c UGAAAGACA GGGUAGUGAga        a
                          |||||    || | ||||||||| |||||||||||        c
                          acggg    gg g ACUUUCUGU UCCAUCACUCU        a
uagaaggcuucggcucacuucuauaa     -uua  c U         -           Uaaaaucu 


mirna_id: ath-MIR822
hairpin:
----           a        uaua             c             CG                    cg     a         c   cc           a           -       a   ucguac             auguuaaugucauaaacuuua 
    cgaccuuaagu uaaguaga    uggggauguaacg auguuguuuucUG  GGAAGCAUUUGCACAUGuuu  uggag augaaauca auu  auacaugaaua uaauuaccuuu uagauag aca      ugcuugaaaaaac                     u
    ||||||||||| ||||||||    ||||||||||||| |||||||||||||  ||||||||||||||||||||  ||||| ||||||||| |||  ||||||||||| ||||||||||| ||||||| |||      |||||||||||||                      
    gcuggaauuca auucaucu    accccuacguugc uauaacaaaggac  cuuucguaaacguguacaaa  accuc uauuuuagu uaa  uauguacuuau auuaauggaag aucuauc ugu      acgaacuuuuuug                     g
uguu           c        ----             a             au                    au     c         a   aa           c           u       g   ------             cgaaaaauauccacaaaagua 


mirna_id: ath-MIR823
hairpin:
aauuucagagauacuaauccaagagauggcggauacguuuuacaauc  g                  a          aau  ga  -     a 
                                               ac aaucuuguaugaucacua ccauuggaac   aa  gu auaua u
                                               || |||||||||||||||||| ||||||||||   ||  || ||||| g
                                               ug uUAGAAUAUACUAGUGGU GGUgaucuug   uu  ca uauau a
cugauuaauuaggguuaucuacccccuauacaaagugacaaugguaa  g                  G          -au  ac  c     g 


mirna_id: ath-MIR825
hairpin:
cuuucuauaauuacuuuuuguauagaauucacuaguugauuc        c     a     ag  c  a     u     aa     cu a 
                                          caucgacu guuca gcacc  cu ga gaagc uagcu  uuuau  u g
                                          |||||||| ||||| |||||  || || ||||| |||||  |||||  | a
                                          guaguuga CAAGU CGUGG  GA CU CUUcg aucga  aagua  a a
guguacacucuagguuaaaaccagaaauguguaguuuuauau        a     A     AA  A  -     u     aa     au a 


mirna_id: ath-MIR826
hairpin:
agagacguggaugcuucucguccacaaguucuuu   -  cuc     u      C                   --------     u  ua 
                                  ggu gc   uauga aUAGUC GGUUUUGGAUACGUGaaaa        ucaua ca  u
                                  ||| ||   ||||| |||||| |||||||||||||||||||        ||||| ||   
                                  ucg cg   auacu uauuag ccaaaaccugugcacuuuu        agugu gu  u
cauucucaucguccuuuuucuacuauucuaugug   u  -uu     c      a                   aauugaaa     c  cg 


mirna_id: ath-MIR827
hairpin:
uuccaugaaacguuauagguuuuuuucuuucucucu     -c  u    u u          u a      c  au        ucc 
                                    ugcaa  cc ugaa g guuuguugau g uaucua ac  guugauca   u
                                    |||||  || |||| | |||||||||| | |||||| ||  ||||||||   u
                                    acguu  gg gcuu c CAAACAACUA C GUAGAU ug  uagcuagu   g
-cuacgauuuuuguacuagcucuaagguucuucgcu     uu  u    u U          C A      U  gu        ugu 


mirna_id: ath-MIR828
hairpin:
gugacaaagucacaaaagugauaaacucuccu          u      U                 UC    uaaaaau      -       g 
                                uuccacuuuc aauguu CUUGCUUAAAUGAGUAU  CAug       gauuca cucacuc u
                                |||||||||| |||||| |||||||||||||||||  ||||       |||||| |||||||  
                                agggugaagg uuguaa gaacgaguuuacucgua  guac       uugggu ggguggg a
uuuucuauuuugaguauguacuauaauuuauc          u      c                 ga    uucucuu      u       u 


mirna_id: ath-MIR829
hairpin:
acgucaaaauugauuaacaaaaagucaaugaauca    a    -u     ug                     ac      a         a      uaa 
                                   uucu ccaa  ugacu  uacuuugaagcuuugauuuga  cuguca uugguauca agcuuc   a
                                   |||| ||||  |||||  |||||||||||||||||||||  |||||| ||||||||| ||||||   u
                                   gaga gguu  acuga  AUGGAACUUCGAAAUUAAACU  GGUAGU AACCAUAGU UCGAag   c
-uaguucuaccauuugagcuucacgaaaaagaaaa    c    cu     uG                     AA      A         C      uuu 


mirna_id: ath-MIR830
hairpin:
cagagucucgcuagugucuuuacuaaacacaa  uc     a   -  -  a  u c       C        U      g   acauauaauaau  a 
                                aa  uguaa cgc cu cg uc c UCUUCUC AAAUAGUU AGGUUa cug            uc a
                                ||  ||||| ||| || || || | ||||||| |||||||| |||||| |||            ||  
                                uu  acauu gcg ga gc aG G AGAAGAG UUUAUCAA Uccaau gac            ag u
--gcuacaagaaguuuuaaguucgugagagga  ga     a   a  a  a  U A       U        -      a   cucuuugacccc  a 


mirna_id: ath-MIR831
hairpin:
gcacaaugcggacagugcuacaagaagagauuua      c   -      u       c    a       g          -       a      g      uuugugaaucaccaaaacaaguggu 
                                  uagagu uua agaguc caagaag guac aggagau aggagugaau caccaaa caagug uuuugg                         u
                                  |||||| ||| |||||| ||||||| |||| ||||||| |||||||||| ||||||| |||||| ||||||                          
                                  aucuca agu ucuuag GUUCUUC CAUG UUCUCUA Ucuucauuug gugguuu guucac aaaacc                         u
-uccgaaaaaccauuugguacggcuacaauguac      c   a      c       U    C       G          u       -      -      cauuugguaugacuaaguguuuggu 


mirna_id: ath-MIR832
hairpin:
aagaaagaaaaaauaagugacaaguaacaaa    ------           a      G    C              c      c   u     -      ---u           agugaaaguaaacuugugaugugaccauauugugcaauaugaauguaaguuggug 
                               caug      agaaaggugaa cuUGCU GGAU GGGAAUCGAAAgau cgaaag cag cuuua gaggau    cugaacgggcu                                                       g
                               ||||      ||||||||||| |||||| |||| |||||||||||||| |||||| ||| ||||| ||||||    |||||||||||                                                       u
                               guac      uuuuuccacuu GAACGA CCUA CCCUUAGUUuucua gcuuuc guu gaagu cuucua    gauuugcccga                                                       g
------guuuuaaaccuauaaaacauuucca    cguuuu           g      A    A              c      c   c     u      cuac           cuacgaaagcaauucuuuuauucacucuacugaaucgguggaacacucuacuggu 


mirna_id: ath-MIR833a
hairpin:
----  ac    a  guac     c     g    c     a          g             U  -                  aa    c  u 
    gg  guag ug    ucuua agaug ugau gugaa acaaacggag aguuUGUUUGUUG AC UCGGUCUAGUucaaacca  acau uu g
    ||  |||| ||    ||||| ||||| |||| ||||| |||||||||| ||||||||||||| || ||||||||||||||||||  |||| ||  
    cc  cguc gc    agaau ucuac acua cacuu uguuugcuuc ucGAACAAACAAC UG AGCCAGAUcgaguuuggu  ugua aa c
cuca  -a    -  --aa     u     a    c     a          g             -  U                  -a    u  a 


mirna_id: ath-MIR834
hairpin:
uacaacauauguuaccaguugugcuaucauuuuuuucagcgacagccaaaauc         u       g   a     a    uccuuuuaaccguu     cacc        g ---    -ca  a  a 
                                                     accaccgcu cugcuac aac uguua gcca              gcugc    acuauuac g   ccau   ca ga a
                                                     ||||||||| ||||||| ||| ||||| ||||              |||||    |||||||| |   ||||   || ||  
                                                     UGGUGGCGA GACGAUG Uug acagu uggu              cgacg    ugauagug c   ggug   gu cu a
acugacgaagacuguggugguuacgaagguaacggcgagugcgauagccguAA         U       G   c     a    --------------     ---a        g aaa    aac  a  u 


mirna_id: ath-MIR835
hairpin:
ugcucgauucuucagauagaaauucuggucau           -             A   G          c   u   u a    g        g  a   a  u      uc            uuugaugguuuuaagaacucuguucuuuuugacguuuuacccaacaauauaacuucuguuguagucaucuucugcugcaacccaucca 
                                cuuuguguuua ggcuuuUUCUUGC UAU UUCUUUAUCu uau gau g uauu uucaauga ca cau cu uucucu  uaccuggauuug                                                                                        c
                                ||||||||||| ||||||||||||| ||| |||||||||| ||| ||| | |||| |||||||| || ||| || ||||||  ||||||||||||                                                                                        a
                                gaaacacaaau uugaGAAAGAACG AUA AAGAGGUaga aua cua c auaa aaguugcu gu gua ga aagaga  auggaccuaaac                                                                                        a
-------------------------------c           g             C   G          a   u   u a    -        a  c   g  u      uu            acugcaaaaagggguuguuacaaugaagauaaaaucacuacaagagaacguuggguagcucuuucccaaauuagaacguacuauucga 


mirna_id: ath-MIR836
hairpin:
g          a   --ua         a            g    c          c               ua     g uaua          -  gg  a    uu     c            c  ua                    ccuucaacaaaaauaccccccucuu       
 caaagcugcc uuu    uaguccaaa cuuaaauuucgu uuug aagucuccac caucgaaggaaacac  gaaga a    auuuauuuga gg  ag aaua  ugaca ggaagcauagcu ca  uccuucaauggagguguggu                         gaaacu 
 |||||||||| |||    ||||||||| |||||||||||| |||| |||||||||| |||||||||||||||  ||||| |    |||||||||| ||  || ||||  ||||| |||||||||||| ||  ||||||||||||||||||||                         ||||| c
 guuuugacgg aaa    aucggguuu gaauuuaaagca aaau uucagaGGUG GUAGUUUCCUUUGUG  CUuuu u    uaaauaaacu cc  uc uuau  acugu ccuucguaucga gu  aggaaguuaccuccacacca                         cuuugu 
-          c   uaaa         -            a    u          C               UC     g cucg          a  au  c    --     u            a  cc                    -------------------------       


mirna_id: ath-MIR837
hairpin:
u            c         c                a           u         C             a       uuuu   uu 
 uuuugauaaaua uuuuguuug uuacaaguauaaaguc ucauguuuuuu cAUCAGUUU UUGUUCGUUUCAa auuauga    ugu  a
 |||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||| ||||||||||||| |||||||    |||   
 aagauuauuuau aaaauaaau aauguucauauuucag aguacaaaaaG GUAGUCAAA AACAAGCAAAguu uaauacu    aca  c
a            a         a                g           -         A             c       ---c   uu 


mirna_id: ath-MIR838
hairpin:
---uacuuuucuaauaucac        ac          guc    g   u             g     c      u    a     ----    aga      cu 
                    gaggacuu  auggccucaa   accu ugg guugugcaagaag agaag aaaguc gucu uguau    uaug   uagcua  u
                    ||||||||  ||||||||||   |||| ||| ||||||||||||| ||||| |||||| |||| |||||    ||||   ||||||   
                    cuucugaa  uaucggaguu   ugga guc caACACGUUCUUC UCUUC UUUcgg caga acaug    auau   aucggu  c
auuauuuauuguaauaucuu        ca          -au    -   -             A     U      c    -     uugu    agg      au 


mirna_id: ath-MIR839
hairpin:
-                         g     uau    uuca                     -            u                   a     ug  a  g             c  c      
 cucacucaugugagcagaaagagua cauga   uuuc    aggucuuUACCAACCUUUCAU CGUUCCCuucuu gcaauaacgcuguuuugca aaccg  au gu cugagccgaugag cu uaaug 
 ||||||||||||||||||||||||| |||||   ||||    ||||||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||  || || ||||||||||||| || |||| a
 gagugaguacacucguuuuucucau guauu   aagg    uccagaaaugguuggagagua gcaagggaagag cguuauuguggcaaaacgu uuggc  ua ca gacucggcuacuc ga auuaa 
u                         g     -cu    uaac                     c            u                   g     gu  c  g             a  u      


mirna_id: ath-MIR840
hairpin:
---      g   guga    -     u    uuuacauc   a          C     A          U            c  c   g       gg   ua  c    uuu 
   cguaaa cag    uuca ccaau uagg        cac guguggaagA ACUGA GGACCUAAAC AACaaagguaaa gg uca ugugcgg  uau  ca ucgg   a
   |||||| |||    |||| ||||| ||||        ||| |||||||||| ||||| |||||||||| |||||||||||| || ||| |||||||  |||  || ||||    
   guauuu guc    gagu gguua gucc        gug cauaucuucu ugauu ccuggauuug uuguuucuauuu uc agu gcacgcc  aua  gu aguc   a
cca      g   ----    a     u    uaaccuaa   c          u     c          u            c  u   a       ua   gc  a    ugu 


mirna_id: ath-MIR841a
hairpin:
g      ca u       -gc   a      u    a      u           G     U    C     g           caauaucaguauaaaauuuuau 
 caccaa  c acuaugu   aga acucug ucuu aguugc ugugaaUACGA CCACU GAAA UGAAa aaacaaagaaa                      c
 ||||||  | |||||||   ||| |||||| |||| |||||| ||||||||||| ||||| |||| ||||| |||||||||||                       
 gugguu  g ugguaca   ucu ugagau agaa ucaacg acacuuaugcu gguga cuuu acuuu uuuguuucuuu                      a
-      ca c       aca   a      c    c      u           g     u    a     a           aaaguaaaaaacaucauauuaa 


mirna_id: ath-MIR842
hairpin:
caguaccguucagggugacagaaacauuuucgaaaa      c      c         a   c               gca  aa  ua  u ug   u 
                                    gagagg uauaag gggaugaug auc gaccaugaugguguu   ga  uu  ug a  aug a
                                    |||||| |||||| ||||||||| ||| |||||||||||||||   ||  ||  || |  |||  
                                    uucuuu guauuc cCCUACUGC UAG CUGGUACUaccacaa   cu  ag  ac u  uau g
cucgaagugaaaaguuaacagguauaaacaacugga      u      a         C   A               -ag  --  gg  c gu   u 


mirna_id: ath-MIR843
hairpin:
aaugcccaaca      c       c      c    u    a uu                    U     caa         ca       auuacuaaa   a 
           acuucg guuauuu ugaaaa uuca aucu u  ucuUUUAGGUCGAGCUUCAU GGAac   augguggcu  uccaucu         gcu u
           |||||| ||||||| |||||| |||| |||| |  |||||||||||||||||||| |||||   |||||||||  |||||||         |||  
           ugaagu caauaaa acuuuu gagu uaga a  agaaaaucuagcucgaagug ccuug   uacuaccga  aggugga         cga a
caccucuuaca      a       a      a    u    c uc                    u     uac         ac       ---------   c 


