# mirna_hairpin

mirna_id: pta-MIR1316
hairpin:
-----g  -a      ------         caaauu   ---     -aag     --a    a 
      gc  gaucca      gaauaagaa      ggg   caaug    gugua   aaga a
      ||  ||||||      |||||||||      |||   |||||    |||||   |||| a
      cg  uuaggu      cuuauucuu      ccu   GUUAC    CACAU   Uucu g
aaguaa  gg      uaacgu         ------   AAG     CAAA     ACC    a 


mirna_id: osa-MIR1317
hairpin:
           c   ua           U              UUU         -C         A  u     u   a 
uauuaucguua caa  uccuAGAUUGC UUCAAGGUCAUUUC   AGGGAACCC  AUUCCCAUA Au cagua cca a
||||||||||| |||  ||||||||||| ||||||||||||||   |||||||||  ||||||||| || ||||| |||  
guaauagcagu guu  agGAUCUAAUG AGGUUCUAGUAAAG   ucccuuggg  uaaggguau ua gucgu ggu g
           c   ug           C              cau         aa         c  u     u   c 


mirna_id: osa-MIR1318
hairpin:
ggau  g     uugu   -g    ug  c      a     A           GA     -c    ------       cu    c 
    gu cguuc    ggg  gguu  gg ccugug UCAGG GAGAUGACACC  Caucg  cgga      auucguu  uggu u
    || |||||    |||  ||||  || |||||| ||||| |||||||||||  |||||  ||||      |||||||  |||| u
    ua guaag    ccc  ucag  uc ggauaC AGUCC CUCUACUGUGG  guagu  gccu      uaaguag  accg g
----  g     ---u   ag    --  a      A     C           AC     uu    gguagu       -u    u 


mirna_id: osa-MIR1319a
hairpin:
-u               uaa             UC                 g      aa 
  augggugucgguuuu   gaaaaAACCGGCA  UGUAAUAUAUUAUAggu ucgguu  u
  |||||||||||||||   |||||||||||||  ||||||||||||||||| ||||||  u
  uauccacagccaaaa   uuuuuuuggccgu  auauuauauaauaucca agccaa  a
uc               ---             ga                 g      aa 


mirna_id: osa-MIR1320
hairpin:
---u    c    u          G             uu    cggga 
    uagg cuac uUGGAACGGA GAAUUUUAUAGga  uuug     a
    |||| |||| |||||||||| |||||||||||||  ||||      
    aucc gaug AACCUUGCUU CUUAAAAUGUccu  agac     u
gauu    c    u          A             -u    aauuu 


mirna_id: bta-mir-1-1
hairpin:
g    gg a                gc     ---   a 
 cuug  a acauacuucuuuaugu  ccaua   ugg c
 ||||  | ||||||||||||||||  |||||   ||| c
 ggac  U UGUAUGAAGAAAUGUA  GGUau   auc u
-    uu A                -A     cga   g 


mirna_id: bta-mir-100
hairpin:
ccuguugc    A   CG    UC   A      -  gg 
        caca ACC  UAGA  CGA CUUGUG gu  u
        |||| |||  ||||  ||| |||||| ||   
        gugu ugg  aucu  guu gaacac cg  a
---ugucu    a   au    gu   c      a  ug 


mirna_id: bta-mir-101-1
hairpin:
a       cuggc                  a    gucca 
 ggcugcc     ucaguuaucacagugcug ugcu     u
 |||||||     |||||||||||||||||| ||||      
 ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
a       uaggA                  -    aaauc 


mirna_id: bta-mir-105b
hairpin:
ugu         U  A          -   U     g ug 
   gcaucgugg CA AUGCUCAGAC UCC UGGUg c  c
   ||||||||| || |||||||||| ||| ||||| |  u
   ugugguauc gu uacgaguuug agg accac g  u
auc         -  g          u   u     - ua 


mirna_id: bta-mir-105a
hairpin:
ugu         U  A          UC        g ug 
   gcaucguag CA AUGCUCAGAC  CUGUGGUg c  c
   ||||||||| || ||||||||||  |||||||| |  u
   uguggcauc gu uacgaguuug  ggcaccac g  c
auc         -  g          ua        - ua 


mirna_id: bta-mir-106b
hairpin:
           -UA       G       A A     guc 
ccugccggggc   AAGUGCU ACAGUGC G Uagug   c
|||||||||||   ||||||| ||||||| | |||||    
ggacggccucg   uucaugg ugucacg c aucgu   u
           ucg       g       c -     gug 


mirna_id: bta-mir-124a-2
hairpin:
----------aucaagaucagac     c  cc        a   ga        uaau 
                       ucugc cu  guguucac gcg  ccuugauu    g
                       ||||| ||  |||||||| |||  ||||||||    u
                       aggcg GA  CGUAAGUG CGC  GGAAUuaa    c
aaguucacgucggcggacauccg     a  AC        G   AC        caua 


mirna_id: bta-mir-124b
hairpin:
u    -   c    - c        a   ga        uaaug 
 gagg gcc cucu g guguucac gcg  ccuugauu     u
 |||| ||| |||| | |||||||| |||  ||||||||      
 cucc cgg gaGA C CGUAAGUG CGC  GGAAUuaa     c
c    g   a    A -        G   AC        cauau 


mirna_id: bta-mir-128-2
hairpin:
u ug       a          agg      cc    g gag 
 g  caguggg aggggggccg   cacugu  gaga u   u
 |  ||||||| ||||||||||   ||||||  |||| |    
 u  gucaucc UUUCUCUGGC   GUGACA  CUcu g   a
c gu       c          CAA      --    g acg 


mirna_id: bta-mir-129-1
hairpin:
    -       C   CU      G   uu cu  c 
ggau CUUUUUG GGU  GGGCUU CUg  c  cu u
|||| ||||||| |||  |||||| |||  |  ||  
ucua gaaaaac cca  cccgaa gac  g  ga a
    u       c   uu      g   -u au  c 


mirna_id: bta-mir-129-2
hairpin:
--cu             -       C   CU      ---     acau 
    gcccuucgcgaau CUUUUUG GGU  GGGCUU   GCUgu    a
    ||||||||||||| ||||||| |||  ||||||   |||||     
    cgggaggcgcuUA GAAAAAC CCA  CCCGAA   cgaua    a
cacg             C       C   UU      ggc     acuc 


mirna_id: bta-mir-130a
hairpin:
u      -      a        c      ug  a   ucu  g 
 gcugcg ggccgg gcucuuuu acauug  cu cug   gc c
 |||||| |||||| |||||||| ||||||  || |||   ||  
 cgacgu ucgguU CGGGAAAA UGUAAC  GA gau   ug c
g      g      A        U      GU  C   cac  u 


mirna_id: bta-mir-130b
hairpin:
      c    ca       cc         a  g   gc 
ggccug cuga  cucuuuc  uguugcacu cu ugc  c
|||||| ||||  |||||||  ||||||||| || |||  c
ccggac ggcU  GGGAAAG  GUAACGUGA ga acg  c
      u    AC       UA         C  -   gu 


mirna_id: bta-mir-133a-2
hairpin:
-      uuu    g       aa  u  a        gccuc 
 caaugc   gcua agcuggu  aa gg accaaauc     u
 ||||||   |||| |||||||  || || ||||||||      
 guuacg   cgau UCGACCA  UU CC UGGUUUag     u
a      uau    G       AC  C  C        guaac 


mirna_id: bta-mir-133a-1
hairpin:
ugggaccg     uuu    a       aa  u  a        aacug 
        aaugc   gcua agcuggu  aa gg accaaauc     u
        |||||   |||| |||||||  || || ||||||||      
        uuacg   cgau UCGACCA  UU CC UGGUUUag     u
-----uag     cgu    G       AC  C  C        guagc 


mirna_id: bta-mir-133b
hairpin:
-------       c        ca  c  a      u  g      
       cccugcu uggcuggu  aa gg accaag cc ucuuc 
       ||||||| ||||||||  || || |||||| || |||| c
       gggacga AUCGACCA  UU CC UGGUUU gg agagu 
aacgguc       c        AC  C  C      -  -      


mirna_id: bta-mir-134
hairpin:
c     gU        U  -A      U  cc   a 
 agggu  GUGACUGG UG  CCAGAG GG  agc c
 |||||  |||||||| ||  |||||| ||  ||| u
 uccca  cacugauc ac  ggucuc cc  uug c
c     ac        c  cg      -  ac   g 


mirna_id: bta-mir-135a-1
hairpin:
a g         u u          UU            uucua 
 g ccucgcugu c cUAUGGCUUU  AUUCCUAUGUGA     c
 | ||||||||| | ||||||||||  ||||||||||||     u
 c ggggcggca g ggugccgagg  uagggauauacu     g
a g         c c          -u            cacuc 


mirna_id: bta-mir-135b
hairpin:
-----------   u                   CAU          uuacug 
           cuc gcuguggccUAUGGCUUUU   UCCUAUGUGA      u
           ||| |||||||||||||||||||   ||||||||||       
           gag ugacaucggguaccgaaaa   gggauguacu      u
ccgcgcgcggg   -                   -uc          caaacc 


mirna_id: bta-mir-136
hairpin:
uug    -       g        C     UUU          uuc 
   gaug agcccuc gaggACUC AUUUG   UGAUGAUGGA   u
   |||| ||||||| |||||||| |||||   ||||||||||   u
   cuac uugggag cuucugag uaaac   gcuacuaccu   a
-ua    c       a        -     ucu          cgc 


mirna_id: bta-mir-138-1
hairpin:
-    cac    c    g   AG             UCA      - gcca 
 cugg   ggug ggug ggc  CUGGUGUUGUGAA   GGCCGu c    a
 ||||   |||| |||| |||  |||||||||||||   |||||| |     
 gacc   ccac ccac cug  gaccacaacacuu   ucggca g    u
g    ---    c    a   -g             -ca      a agac 


mirna_id: bta-mir-141
hairpin:
ga      cu   u       --    c        -   ugg  ua 
  ccggcu  ggg ccaucuu  ccag acaguguu gga   uc  a
  ||||||  ||| |||||||  |||| |||||||| |||   ||  u
  ggucgg  ccc GGUAGAA  GGUC UGUCACAA ccu   ag  g
--      cc   -       AU    -        U   cga  ug 


mirna_id: bta-mir-143
hairpin:
---  - uc --ug      ag      g         g      u  -  ag 
   gc g  c    ucuccc  ccugag ugcagugcu caucuc gg uc  u
   || |  |    ||||||  |||||| ||||||||| |||||| || ||   
   cg c  g    agaggg  ggGCUC AUGUCACGA GUAGAG cu ag  u
cga  u uu uuga      aa      G         A      U  g  gg 


mirna_id: bta-mir-144
hairpin:
---- g    u      g        a         -a    gc 
    g gccc gacugg auaucauc uauacugua  guuu  a
    | |||| |||||| |||||||| |||||||||  ||||   
    c uggg cuGAUC UGUAGUAG AUAUGACAU  caga  a
cccu g    c      A        -         ca    gc 


mirna_id: bta-mir-146b
hairpin:
uaagagaacuu    -  -  u   u  G        A    A    CU  ga  u 
           uggc ca cc ggc cU AGAACUGA UUCC UAGG  GU  gc c
           |||| || || ||| || |||||||| |||| ||||  ||  ||  
           aucg gu gg ccg gg ucuugacu aggg aucc  ua  cg u
----cuaccac    u  c  c   u  -        c    -    cg  aa  a 


mirna_id: bta-mir-146a
hairpin:
-----cccaugu      u     uU            C        G  uc 
            guaucc cagcu  GAGAACUGAAUU CAUAGGUU Ug  a
            |||||| |||||  |||||||||||| |||||||| ||  g
            uauagg gucga  uucuugauuuga guguccag ac  u
uccuacuaucuc      -     -u            a        -  ug 


mirna_id: bta-mir-147
hairpin:
--  u    c   ug   a  c         --  ---   g 
  ua gaau uag  gaa ca uucugcaca  gg   cua a
  || |||| |||  ||| || |||||||||  ||   ||| u
  au uuua AUC  CUU GU AAGGCGUGU  cc   ggu u
gg  u    c   GU   C  A         Ga  aua   a 


mirna_id: bta-mir-152
hairpin:
u    -   c              g  a    cc    cgg   c 
 gucc ucc ggcccagguucugu au cacu  gacu   gcu u
 |||| ||| |||||||||||||| || ||||  ||||   |||  
 cagg agg ccGGGUUCAAGACA UA GUGA  CUga   cga g
c    c   c              G  C    --    ---   g 


mirna_id: bta-mir-153-1
hairpin:
c     g       c -             -c       --   au 
 ucacg cugccag g ucauuuuugugau  ugcagcu  agu  u
 ||||| ||||||| | |||||||||||||  |||||||  |||   
 ggugu gacgguc C AGUGAAAACACUG  ACGUUga  uca  c
c     g       a U             AU       cc   cu 


mirna_id: bta-mir-154a
hairpin:
gc  a   u          UAU       GCC    - uuu 
  gg acu gaagaUAGGU   CCGUGUA   UUCG c   a
  || ||| ||||||||||   |||||||   |||| |   c
  cc uga uuuuuaucca   ggcacau   aagc g   u
aa  a   u          cuu       acu    a ugu 


mirna_id: bta-mir-155
hairpin:
u           U    A        uuua c 
 gUUAAUGCUAA CGUG UAGGGGUu    c u
 ||||||||||| |||| ||||||||    |  
 caauuacgauu guac auccucag    g c
a           -    -        -uca g 


mirna_id: bta-mir-16a
hairpin:
      ag   c          -  A        U u   gauu 
gucagc  ugc uUAGCAGCAC GU AAUAUUGG G uaa    c
||||||  ||| |||||||||| || |||||||| | |||     
cgguug  aug agucgucgug ca uuaugacc c auu    u
      ga   a          u  a        u u   aaaa 


mirna_id: bta-mir-181d
hairpin:
uccccucccuua    a    gaaggu    aucA         G UG          g  aca 
            ggcc cagc      caca    ACAUUCAUU U  UCGGUGGGUu ug   g
            |||| ||||      ||||    ||||||||| |  |||||||||| ||    
            ccgg gucg      gugu    uguaaguag g  agccacccag ac   a
------cacaga    -    ------    -cac         g --          -  cag 


mirna_id: bta-mir-182
hairpin:
cgcc  -c   -u   uc -      uU       U -G      UCA      ugaggu 
    gc  gcc  gcc  c caccau  UUGGCAA G  UAGAAC   CACUgg      a
    ||  |||  |||  | ||||||  ||||||| |  ||||||   ||||||       
    cg  cgg  cgg  g guggua  aaccguu c  aucuug   guggcc      a
---a  ac   uu   ga c      uc       - ag      ---      uagggu 


mirna_id: bta-mir-184
hairpin:
c       auc         c      ag     uuu  ga 
 cagucac   cccuuauca uuuucc  ccagc   gu  c
 |||||||   ||||||||| ||||||  |||||   ||  u
 guuagug   GGGAAUAGU AAGAGG  GGUug   ca  c
a       gaU         C      CA     --u  au 


mirna_id: bta-mir-185
hairpin:
     u     a      A     G         Au  uc 
ggggg gaggg cUGGAG GAAAG CAGUUCCUG  gg  c
||||| ||||| |||||| ||||| |||||||||  ||   
ccuuc cuccc ggccuc cuuuc gucggggac  cc  c
     -     c      -     g         -c  uc 


mirna_id: bta-mir-187
hairpin:
ggccgggcuccccacgacacggu   aga    g    a           - --c   -  cu 
                       gug   ccuc ggcu caacacgggac c   ggg cg  g
                       |||   |||| |||| ||||||||||| |   ||| ||   
                       cgc   ggaG CCGA GUUGUGUUCUG G   ccc gc  c
--------------acgccugaa   -ag    G    C           U CUc   a  cu 


mirna_id: bta-mir-188
hairpin:
u    -  uc   ca  UC         GU      -Ugag u 
 gcuc cc  ucu  CA  CCUUGCAUG  GGAGGG     c u
 |||| ||  |||  ||  |||||||||  ||||||     | u
 cgag gg  agg  gu  gggacguac  ccuccc     g c
c    u  -u   ac  uu         ac      caaaa u 


mirna_id: bta-mir-24-1
hairpin:
    g  G   A         UA     ucuca 
cucc GU CCU CUGAGCUGA  UCAGU     u
|||| || ||| |||||||||  |||||     u
gagg ca gga gacuugacu  gguca     u
    a  a   c         -c     cacau 


mirna_id: bta-mir-190b
hairpin:
-    u     -U               G     -   aa 
 ugcu cugug  GAUAUGUUUGAUAUU GGUUg uuu  u
 |||| |||||  ||||||||||||||| ||||| |||   
 auga gacau  uuauacaaacuguaa ucaac aag  u
g    c     uc               a     c   ga 


mirna_id: bta-mir-193b
hairpin:
   gu       u    gu    a    g  a  ag uua 
gug  cccagaa cggg  uuug gggc ag ug  u   u
|||  ||||||| ||||  |||| |||| || ||  |   g
uac  ggguUUU GCCC  AAAC CCCG UC Ac  a   u
   ug       C    UG    A    G  A  cu uuu 


mirna_id: bta-mir-194-2
hairpin:
u            cU         A      G     g  c 
 ggcucccacccc  GUAACAGCA CUCCAU UGGAa ua c
 ||||||||||||  ||||||||| |||||| ||||| ||  
 ccgggggugggg  uauugucgu ggggug accuu au u
a            uc         c      -     g  c 


mirna_id: bta-mir-196a-2
hairpin:
a     uc                  A          a ug   
 gcuga  uguggcuUAGGUAGUUUC UGUUGUUGGG u  ag 
 |||||  |||||||||||||||||| |||||||||| |  | u
 ugacu  acauugaguccgucaaag acaacggcuc a  uu 
c     --                  a          a gu   


mirna_id: bta-mir-196a-1
hairpin:
u  a ugg       ga    a UA   A    C         - Gc u  a 
 ga c   aacugcu  guga u  GGU GUUU AUGUUGUUG G  c gg u
 || |   |||||||  |||| |  ||| |||| ||||||||| |  | ||  
 cu g   uugacgg  cacu a  cca caaa uacagcaac c  g uc u
c  c uca       --    c gc   c    u         a aa -  u 


mirna_id: bta-mir-196b
hairpin:
-      uc      uU       U  C           ucca 
 aacugg  ggugau  AGGUAGU UC UGUUGUUGGGA    c
 ||||||  ||||||  ||||||| || |||||||||||     
 uugacu  ucauua  uccguca ag acgacagcucu    c
g      --      cu       c  c           cuuu 


mirna_id: bta-mir-197
hairpin:
--gg    g   c    a       ca    ga   -   a 
    ggcu ugc gggu gagaggg  gugg  ggu aag g
    |||| ||| |||| |||||||  ||||  ||| |||  
    ccgg aCG CCCA CUCUUCC  CACU  cca uuc c
acga    g   A    C       AC    Uc   c   u 


mirna_id: bta-mir-199a-2
hairpin:
   aaC       U        C   ------     g 
gcc   CCAGUGU CAGACUAC UGU      Ucagg g
|||   ||||||| |||||||| |||      |||||  
cgg   GGUUACA GUCUGAUG ACA      agucu g
   AUU       C        -   ugugua     c 


mirna_id: bta-mir-202
hairpin:
-------gcca    cu     u           -A           g   gu 
           cucg  guucc uuUUCCUAUGC  UAUACUUCUUU agg  c
           ||||  ||||| |||||||||||  ||||||||||| |||   
           gagc  cgggg aaaaggguacg  auguggagaaa ucc  u
gcguccccuug    cc     u           gg           -   gg 


mirna_id: bta-mir-206
hairpin:
u    c  a                     cc     -    u 
 gcuu cc aggccacaugcuucuuuauau  ccaua cgga u
 |||| || |||||||||||||||||||||  ||||| ||||  
 cgag gg uuuGGUGUGUGAAGGAAUGUA  GGUau guuu a
g    c  c                     -A     c    c 


mirna_id: bta-mir-208b
hairpin:
--c        g          c   cg        cu 
   cucucagg aagcuuuuug ucg  uuauguuu  c
   |||||||| |||||||||| |||  ||||||||  a
   gggagucU UUUGGAAAAC AGC  AAUAuaag  u
gac        G          A   AG        cc 


mirna_id: bta-mir-211
hairpin:
-   ccug     -----     cug     U         CA     U    agggu 
 ucc    gcugu     gugac   ugggc UCCCUUUGU  UCCUU GCCc     u
 |||    |||||     |||||   ||||| |||||||||  ||||| ||||     c
 agg    cgaca     cacug   acucg ggggaaacg  aggga cggg     u
g   --ua     cccuc     cug     u         ac     -    gugag 


mirna_id: bta-mir-212
hairpin:
cggagccacccugcccgggcagc   c   -cA  U     CU      C      ccc     
                       gcg cgg   CC UGGCU  AGACUG UUACUg   gggc 
                       ||| |||   || |||||  |||||| ||||||   ||| c
                       cgc gcc   gg acuga  ucugac aaugac   cccg 
------------ccgccccgguc   a   acc  c     cc      -      --u     


mirna_id: bta-mir-216a
hairpin:
--------------   g   g  ag     u         CU   A      -  --a   u 
              gau gcu ug  uuggc UAAUCUCAG  GGC ACUGUG Ag   ugu c
              ||| ||| ||  ||||| |||||||||  ||| |||||| ||   |||  
              cua cga ac  aaucg auuaggguc  cug ugacac uc   aca a
guacucccguuccu   a   g  -a     u         -u   g      c  cug   u 


mirna_id: bta-mir-216b
hairpin:
--g       gaA         A  --CAAA      g  ac 
   cagacug   AAUCUCUGC GG      UGUGAu uc  u
   |||||||   ||||||||| ||      |||||| ||   
   gucugac   uuagagaug cc      acacua ag  a
aca       auc         c  auucac      a  aa 


mirna_id: bta-mir-217
hairpin:
aauauaauuaacacaga    uu     c c  a  C     C          U -   aag 
                 guuu  gaugu g ag UA UGCAU AGGAACUGAU G GAU   a
                 ||||  ||||| | || || ||||| |||||||||| | |||    
                 caaa  cuacg c uc gu acgua uccuugacua c cug   a
--------------gaa    -u     a u  c  u     c          c a   gcu 


mirna_id: bta-mir-218-1
hairpin:
-    uuau  a   a   u      U         CU        Gg    -  g 
 gugg    gu gcg gau uucugU GUGCUUGAU  AACCAUGU  uugc ca g
 ||||    || ||| ||| |||||| |||||||||  ||||||||  |||| ||  
 cauc    cg cgc cug aaggua cacgaacug  uugguaca  aaug gu u
a    -uuu  a   a   c      c         cc        -a    a  a 


mirna_id: bta-mir-219
hairpin:
acuca       c     U   U     AA           uac a  c 
     ggagcuu gccac GAU GUCCA  CGCAAUUCUUg   g gu u
     ||||||| ||||| ||| |||||  |||||||||||   | || g
     ucucgag cgguG CUA CAGGU  GUGUUAAGAgc   c cg c
---gg       u     U   -     CG           caa -  g 


mirna_id: bta-mir-223
hairpin:
ccca  cuccu   -          cc u              gaguug      c a 
    gc     gca gugccaugcu  g guauuugacaagcu      gacacu c u
    ||     ||| ||||||||||  | ||||||||||||||      |||||| | g
    cg     cgu uacgguguga  C CAUAAACUGUUUGA      CUGUga g u
--ga  --auc   a          AC C              ------      u a 


mirna_id: bta-mir-224
hairpin:
       CA         U   U      A --ua    gu 
gggcuuu  AGUCACUAG GGU CCGUUU g    gaug  u
|||||||  ||||||||| ||| |||||| |    ||||   
cccgaaa  ucagugauc cca gguaaa c    uuac  g
       ca         -   u      a uuug    au 


mirna_id: bta-mir-26a-1
hairpin:
a     -   g  u   U         C          g gca g 
 aggcc gug cc cgU CAAGUAAUC AGGAUAGGCU u   g u
 ||||| ||| || ||| ||||||||| |||||||||| |   |  
 uccgg cgc gg gca guucauugg ucuuauccgg g   c c
g     g   a  c   c         c          g -aa c 


mirna_id: bta-mir-28
hairpin:
   c         A        A       U  ----    gcc 
ggu cuugcccuc AGGAGCUC CAGUCUA UG    AGuu   u
||| ||||||||| |||||||| ||||||| ||    ||||    
uca ggacgggag uccucgag guuagau ac    ucag   u
   c         g        a       c  ccuu    ucu 


mirna_id: bta-mir-296
hairpin:
a         c        c  -         g   u    
 ggacccuuc ggagggcc cc cccaauccu uug gcu 
 ||||||||| |||||||| || ||||||||| ||| || u
 ucugggaag CCUUUCGG GG GGGUUGGGA Gac ugg 
-         u        A  C         -   u    


mirna_id: bta-mir-299
hairpin:
     a                      uc 
aagaa UGGUUUACCGUCCCACAUACAU  u
||||| ||||||||||||||||||||||  g
uucuu gccaaauggcaggguguaugua  a
     c                      ua 


mirna_id: bta-mir-29d
hairpin:
a         -  ggc   c       ucc       ---     u 
 ucucuuaca ca   uga cgauuuc   ugguguu   cagag c
 ||||||||| ||   ||| |||||||   |||||||   ||||| u
 gggggaugu gu   AUU GCUAAAG   ACCACGA   guuuu g
a         a  ---   A       UUU       Ucu     u 


mirna_id: bta-mir-301a
hairpin:
a     aa  a     c    ---u          ----a       
 cugcu  cg augcu ugac    uuauugcacu     cuguac 
 |||||  || ||||| ||||    ||||||||||     ||||| u
 gacga  gu UACGA ACUG    GAUAACGUGA     gacauu 
-     aa  c     A    UUAU          Cgauc       


mirna_id: bta-mir-301b
hairpin:
-   --u     -  g a      c      ---g        acugu    u 
 ucc   gcugg cc c ggugcu ugacga    guugcacu     gcuu g
 |||   ||||| || | |||||| ||||||    ||||||||     ||||  
 agg   cgacc gg g cUACGA ACUGUU    UAACGUGA     Cgag a
g   uuc     a  - c      A      AUAG        -----    g 


mirna_id: bta-mir-302a
hairpin:
c   c    u         u           aua 
 cca cacu aaacgugga guacuugcuuu   g
 ||| |||| ||||||||| |||||||||||   c
 ggu GUGA UUUGUACCU CGUGAAugaaa   u
-   A    U         U           aaa 


mirna_id: bta-mir-302d
hairpin:
c  c    uu                -----c    a 
 cu uacu  aacauggaggcacuug      ugug c
 || ||||  ||||||||||||||||      ||||  
 gg gUGA  UUGUACCUUCGUGAAU      auac u
-  c    UU                aaaaaa    u 


mirna_id: bta-mir-302b
hairpin:
cucc    a   uu       u       u    ga u 
    cuuu acu  aacaugg aguacuu cugu  c u
    |||| |||  ||||||| ||||||| ||||  |  
    gaaG UGA  UUGUACC UCGUGAA gaua  g u
---u    A   UU       U       U    aa u 


mirna_id: bta-mir-302c
hairpin:
    ug  uu             c    -g  u 
ccuc  cu  aacauggggguac ugcu  ug a
||||  ||  ||||||||||||| ||||  || a
ggaG  GA  UUGUACCUUCGUG AUga  ac a
    GU  CU             A    aa  g 


mirna_id: bta-mir-30f
hairpin:
g     c   uacU       C   ACA         -gug a 
 agggc aga    GUAAACA CCU   CUCUCAGCU    c c
 ||||| |||    ||||||| |||   |||||||||    | a
 uuccg ucu    cauuugu gga   gagggucga    g g
-     -   cucu       c   --a         aaga u 


mirna_id: bta-mir-32
hairpin:
        UG      A          -  uu  c 
ggaggUAU  CACAUG CUAAGUUGCA Ug  gu a
||||||||  |||||| |||||||||| ||  ||  
cuuuuaua  guguau gauuuaacgu ac  cg c
        gu      -          g  uc  g 


mirna_id: bta-mir-323
hairpin:
---uu      u g        g u     gcgc  u    uua 
     gguacu g agagaggu g ccgug    gu cgcu   u
     |||||| | |||||||| | |||||    || ||||    
     cuauga c uuUCUCCA C GGCAC    CA Gcgg   u
cuaau      - g        G U     AUUA  C    uau 


mirna_id: bta-mir-324
hairpin:
aacu      gc     C   U C   A     U   U  aaag 
    ggcuau  cuccc GCA C CCU GGGCA UGG GU    c
    ||||||  ||||| ||| | ||| ||||| ||| ||     
    cugaug  ggggg cgu g gga cccgu acc ca    u
cagu      uu     u   c u   c     c   -  gagg 


mirna_id: bta-mir-326
hairpin:
cuc        g            c       uugu  a    gg   u 
   gucugucu uugggcuggagg agggccu    ga ggcg  uug g
   |||||||| |||||||||||| |||||||    || ||||  |||  
   uaggcgga gacccGACCUCC UCCCGGG    CU CCgc  gac c
acu        -            U       ---U  -    ua   u 


mirna_id: bta-mir-328
hairpin:
cuguuuc     cu  ag           ga     u     a a    g 
       ggagc  gg  cgggggggcag  ggggc caggg g uagu u
       |||||  ||  |||||||||||  ||||| ||||| | ||||  
       ccuug  cc  GCCUUCCCGUC  UCCCG GUCcc c gucg g
-------     uc  cU           UC     -     - -    u 


mirna_id: bta-mir-329a
hairpin:
g       u           uu      cuc      u   a 
 ugguacu gaggagagguu  cuaggu   uguuuc uuc u
 ||||||| |||||||||||  ||||||   |||||| |||  
 acuauga cuUUUUUCCAA  GGUCCA   ACAAag agg g
-       c           UU      --C      u   a 


mirna_id: bta-mir-329b
hairpin:
-      cu           UU UG   UUC      u  aa 
 ugguac  gaagAGAGGUU  C  GGU   UGUUUc uu  u
 ||||||  |||||||||||  |  |||   |||||| ||   
 acuaug  cuuuucuccaa  g  cca   acaaag ag  g
a      ac           uu gu   --c      u  ga 


mirna_id: bta-mir-330
hairpin:
cuuc   -  u a           --    -    u   ag    ugcaa 
    ggc ga c cugccucucug  ggcc ugug cuu  gcuc     g
    ||| || | |||||||||||  |||| |||| |||  ||||     a
    ucg cu g gacggAGAGAC  CCGG ACAC GAA  CGag     u
---c   a  c c           GU    C    -   -A    ccaac 


mirna_id: bta-mir-335
hairpin:
----------uuu    c        A         C        U  gu 
             uggg gggggUCA GAGCAAUAA GAAAAAUG uu  c
             |||| |||||||| ||||||||| |||||||| ||   
             acuc ccuccagu cucguuauu cuuuuugc aa  a
acucaugucguuu    u        c         a        c  au 


mirna_id: bta-mir-338
hairpin:
gcacg   c      cc      u   -         -   ga  a 
     ggc guccuc  caacaa auc cuggugcug agu  ug c
     ||| ||||||  |||||| ||| ||||||||| |||  || a
     ucg cgggag  GUUGUU UAG GACUACGAC Uca  gc c
-accg   a      aA      U   U         C   ac  a 


mirna_id: bta-mir-339a
hairpin:
ggg    c   u U C   U    C      U   uu  u 
   gcag cgc g C CUG CCUC AGGAGC CAC  gg c
   |||| ||| | | ||| |||| |||||| |||  || c
   cguc gug c g gac ggag uccucg gug  cc g
---    u   c c a   c    c      c   --  g 


mirna_id: bta-mir-33a
hairpin:
   c          A UU          uucu  c 
cug gGUGCAUUGU G  GCAUUGCAug    gg g
||| |||||||||| |  ||||||||||    || g
gac cuacgugaca c  uguaacgugc    cc u
   a          c uu          ----  a 


mirna_id: bta-mir-33b
hairpin:
---------gcggg    c   c  -          UU         g  u 
              cggc ccg gG UGCAUUGCUG  GCAUUGCau ug g
              |||| ||| || ||||||||||  ||||||||| || a
              gccg ggc cc acgugacggc  cgugacgug ac g
cgccacgguccccg    a   -  g          uc         g  g 


mirna_id: bta-mir-340
hairpin:
--uu     u      au       -caa      u    g     ug 
    guacc ggugug  uauaaag    ugagac gauu ucaug  u
    ||||| ||||||  |||||||    |||||| |||| |||||  c
    uaugg ccauaC  AUAUUUC    ACUCUG CUag ggugu  g
auuc     u      CG       AUUG      C    -     uu 


mirna_id: bta-mir-346
hairpin:
-g u      g ug    u    CU    -  AUG        U  guug 
  g cucugu u  ggcg cUGU  GCCC GC   CCUGCCUC cu    c
  | |||||| |  |||| ||||  |||| ||   |||||||| ||     
  c gagacg g  ccgu gacg  cggg cg   ggacggag ga    u
gg -      - gu    c    uu    u  --g        -  aguc 


mirna_id: bta-mir-362
hairpin:
cuc           ACC        -A Ug     
   gAAUCCUUGGA   UAGGUGUG  G  cugu 
   |||||||||||   ||||||||  |  ||| u
   CUUAGGAACUU   AUCCACAC  c  gauc 
aaa           ---        AA gu     


mirna_id: bta-mir-365-2
hairpin:
--a  g   u  aggaca       a        ac   c       -----    u   u 
   ga ugc cg      gcaagaa aaugaggg  uuu aggggca     gcug guu u
   || ||| ||      ||||||| ||||||||  ||| |||||||     |||| |||  
   cu acg gu      cguucuu uUAUUCCU  AAA UCCCCGU     ugac cag c
gga  -   u  ----ga       g        AA   -       AAUac    u   u 


mirna_id: bta-mir-367
hairpin:
                ua     cucug      u 
ccauuacuguugcuaa  ugcaa     uucaau c
||||||||||||||||  |||||     ||||||  
gguAGUGGUAACGAUU  ACGUU     AGguua a
                UC     ----A      a 


mirna_id: bta-mir-370
hairpin:
      agaa       ca gu   u    uua   -  c 
aggcag    gccaggu  c  cuc gcag   cac cg u
||||||    |||||||  |  ||| ||||   ||| ||  
ucuguc    UGGUCCA  G  GGG CGUC   Gug gc c
      ----       AG UG   U    --C   a  a 


mirna_id: bta-mir-292
hairpin:
     u  gg        cu    g         g     
cagcc gu  uacucaaa  gugg ggcacuucc uuuu 
||||| ||  ||||||||  |||| ||||||||| ||| a
guugg ca  GUGAGUUU  UACC CCGUGAAgg aagc 
     c  uU        UG    G         g     


mirna_id: bta-mir-374b
hairpin:
gaa  aau  ---u  u    ug AU             C       c 
   ga   cc    ac cgga  g  AUAAUACAACCUG UAAGUGu c
   ||   ||    || ||||  |  ||||||||||||| |||||||  
   cu   gg    ug gccu  u  uauuauguuggac auucacg u
cug  cuc  uauc  u    gu ac             u       a 


mirna_id: bta-mir-375
hairpin:
c  -    a      ccu  c     c  gac 
 cc cgcg cgagcc   cg acaaa cg   c
 || |||| ||||||   || ||||| ||    
 gg GUGC GCUCGG   GC UGUUU gc   u
c  A    -      CUU  U     U  gag 


mirna_id: bta-mir-378-1
hairpin:
   g  c              ugu      ccu 
agg cu cugacuccaggucc   guguua   c
||| || ||||||||||||||   ||||||    
ucC GA GACUGAGGUUCAGG   CAcgau   g
   G  A              --U      aaa 


mirna_id: bta-mir-379
hairpin:
u  uuc   c    a    A       GA       - uuugu 
 gg   cug agag UGGU GACUAUG  ACGUAGG c     g
 ||   ||| |||| |||| |||||||  ||||||| |      
 cc   gac ucuc auca cugguac  uguaucc g     a
a  uau   -    a    c       aa       a uuuuu 


mirna_id: bta-mir-381
hairpin:
      g  c   g        u        --g   u 
uacuca ag gag uugcccuu guauauuc   guu u
|||||| || ||| |||||||| ||||||||   |||  
augagU UC CUC AACGGGAA CAUAUaag   uag u
      G  U   G        -        aug   u 


mirna_id: bta-mir-383
hairpin:
   -c  A      AA    A        --    gu 
cuc  uc GAUCAG  GGUG UUGUGGCU  uugg  g
|||  || ||||||  |||| ||||||||  ||||  g
gag  ag cugguc  ucac gacaccga  aacu  a
   aa  a      cg    -        cu    au 


mirna_id: bta-mir-409a
hairpin:
u     g  gg   A    AC         -    - AUc 
 gguac cg  gag GGUU  CCGAGCAAC UUUG C   u
 ||||| ||  ||| ||||  ||||||||| |||| |    
 cuaug gc  uuc ccaa  ggcucguug aagc g   g
a     -  uu   c    gu         u    a cag 


mirna_id: bta-mir-410
hairpin:
g      u     g    ug      a  a     - uuu 
 gguacu gagga aggu  ucugug ug guucg c   a
 |||||| ||||| ||||  |||||| || ||||| |   u
 ccauga cuuuU UCCG  AGACAC AU UAAgc g   u
a      -     G    GU      A  A     a uaa 


mirna_id: bta-mir-411a
hairpin:
u      ug   a A    A      A A       - uuu 
 gguacu  gag g UAGU GACCGU U GCGUACG c   a
 ||||||  ||| | |||| |||||| | ||||||| |   u
 cuauga  cuc c auca cuggca a uguaugc g   c
a      --   c a    c      c a       a ugu 


mirna_id: bta-mir-412
hairpin:
----cug      a      a    c      u   aa    -    u 
       ggguac ggacgg uggu gaccag ugg  agua auug u
       |||||| |||||| |||| |||||| |||  |||| ||||  
       cccaug ccUGUC AUCA CUGGUC ACU  UCAu uaau u
gacguca      -      G    C      C   --    g    c 


mirna_id: bta-mir-429
hairpin:
a   u cc        u -          cg       cu  u 
 gcc g  gaugggcg c uuaccagaca  guuagau  gg c
 ||| |  |||||||| | ||||||||||  |||||||  ||  
 cgg c  cuaccUGC G AAUGGUCUGU  UAAUcug  cu c
-   - cc        C U          CA       -u  u 


mirna_id: bta-mir-431
hairpin:
-------------uccugc -    c       U          C  U A   AGGccacacu 
                   g cguc ugcgagg GUCUUGCAGG CG C UGC          g
                   | |||| ||||||| |||||||||| || | |||           
                   c gcag acgcucu cgggacguuc gc g acg          a
gcagcucccacuacuuaua a    a       u          u  u g   uugcaaaggc 


mirna_id: bta-mir-433
hairpin:
------------------------uggccgg      gua   u          uuguucagagaggcuagau 
                               ggagaa   cgg gagccuguca                   c
                               ||||||   ||| ||||||||||                    
                               ccucuU   GCU CUCGGGUAGU                   c
cccgacggaaguaccacaccacggcgaugga      GUG   C          ACUAggaagaguuguuccu 


mirna_id: bta-mir-448
hairpin:
----------gc        u a            g   u     ga       a   ua 
            ggggaggu g acauccugcaua ugc gccag  aaucccu uuu  u
            |||||||| | |||||||||||| ||| |||||  ||||||| |||   
            ccccucUA C UGUAGGAUGUAU ACG Ugguc  uuggggg gaa  a
cuacuacaccca        C C            -   U     gg       g   uc 


mirna_id: bta-mir-449a
hairpin:
----u   ug     u       -    U          u a  au 
     gug  auggg UGGCAGU GUAU GUUAGCUGGU g au  g
     |||  ||||| ||||||| |||| |||||||||| | ||   
     uac  uauuc aucguca cgua caaucgacua c ug  u
auaug   gu     u       a    -          c g  ag 


mirna_id: bta-mir-449b
hairpin:
---------uga  u   u     A     U   UU   A C        uu gg 
            cc gaa caggu GGCAG GUA  GUU G UGGCugcu  g  u
            || ||| ||||| ||||| |||  ||| | ||||||||  |   
            gg cuu guuca ccguc cgu  caa c accgacga  u  c
ucuucuuaaaua  u   c     -     c   --   - -        cu aa 


mirna_id: bta-mir-449c
hairpin:
aug   --cu        u    uA  C      UCU     U           u 
   aag    ugaaugug cagg  GG AGUGCA   CUAGC GGcuguuaaaa u
   |||    |||||||| ||||  || ||||||   ||||| ||||||||||| u
   uuc    acuuacgu gucu  cc ucacgu   gaucg uugacaauuuu c
-cg   uaau        u    cc  -      --u     -           u 


mirna_id: bta-mir-451
hairpin:
c     - ug     gA                GA 
 uuggg g  gcgag  AACCGUUACCAUUACU  G
 ||||| |  |||||  ||||||||||||||||   
 gaccc c  cguuc  uuggcaaugguaauga  U
a     a gu     uc                UU 


mirna_id: bta-mir-452
hairpin:
  u          aac G        G  A       Cu ug 
gc aagcacuuac   U UUUGCAGA GA ACUGAGA  u  u
|| ||||||||||   | |||||||| || |||||||  |  a
cg uucgugaaug   a aaacgucu cu ugacucu  a  a
  u          --a g        a  c       au uc 


mirna_id: bta-mir-453
hairpin:
---------------     aa      ca     a  g    a  g 
               gcggg  cgccac  gcagc cu ccuc cg u
               |||||  ||||||  ||||| || |||| || a
               CGCUU  GUGGUG  UGUUG GA ggag gu c
cguaguaauuuauuA     GA      CC     -  g    -  u 


mirna_id: bta-mir-454
hairpin:
--------c     auua     uc            ---         ----   --u     g 
         uguuu    ccaga  cuagaacccuau   cgauauugu    cuc   gcugu u
         |||||    |||||  ||||||||||||   |||||||||    |||   |||||  
         acaag    gguuu  gguuuUGGGAUA   GUUAUAACG    gag   cgaua a
guacgggua     -aag     gu            UUC         UGAU   ucu     a 


mirna_id: bta-mir-483
hairpin:
-             a  a     g c ug u  g 
 ggggagggcggga ga aggag g g  g cu u
 ||||||||||||| || ||||| | |  | ||  
 ccucUUCUGCCCU CU UCCUC C c  c ga g
u             C  C     A U cu -  c 


mirna_id: bta-mir-485
hairpin:
   u         CU       -    A    auuc 
acu gaagAGAGG  GGCCGUG AUGA UUCG    a
||| |||||||||  ||||||| |||| ||||    u
uga uuucucucc  ucggcac uacu gagc    c
   u         uc       a    -    gaaa 


mirna_id: bta-mir-486
hairpin:
g  a    --  a  u  gu  u        g    U           C     ----   c uu 
 cc gcuu  gg cc gc  cc cccugacg gUCC GUACUGAGCUG CCCGA    Ggc c  c
 || ||||  || || ||  || |||||||| |||| ||||||||||| |||||    ||| |   
 gg cgaa  cc gg ug  gg ggggcugc cggg caugacucgac gggcu    ccg g  g
-  a    gg  -  c  ag  u        g    c           u     cgac   u uc 


mirna_id: bta-mir-488
hairpin:
-------------    a  a   cu  c   u      a  c        g u 
             gaga uc ucu  cc aga aauggc cu ucaaacag u u
             |||| || |||  || ||| |||||| || |||||||| | c
             cucu ag aga  GG UCU UUGUCG GA AGUUuguu g c
aggucuuccuuaa    c  a   CU  U   -      -  A        g a 


mirna_id: bta-mir-490
hairpin:
-u    -ac      g    -   aguucauu        c      --         g   cac   u 
  ggag   uugcug uuug gaa        guucgaca caugga  ucuccaggu ggu   guu a
  ||||   |||||| |||| |||        |||||||| ||||||  ||||||||| |||   |||  
  cuuc   ggcgac gaac cuu        cgaguuGU GUACCU  GGAGGUCCA Cca   uag g
au    aca      -    a   ------gu        C      CA         A   -ca   a 


mirna_id: bta-mir-491
hairpin:
 ug      cu      U      CC   C          a 
u  acuuag  ggguAG GGGGAA  CUU CAUGAGGagu g
|  ||||||  |||||| ||||||  ||| |||||||||| a
g  uggguc  uccauc ucccuu  gaa guauuccuca a
 gu      ag      u      -a   c          c 


mirna_id: bta-mir-493
hairpin:
     ccc        u                    cauuc  u 
cuggc   cagggccu guacaugguaggcuuucauu     gu u
|||||   |||||||| ||||||||||||||||||||     ||  
gaccg   gucccGGA CGUGUGUCAUCUGGAAGUgg     ca g
     --u        C                    -cuua  c 


mirna_id: bta-mir-494
hairpin:
uc      u            a       -   c   -  uuu 
  gauacu gaaggagagguu uccgugu ugu uuc uc   a
  |||||| |||||||||||| ||||||| ||| ||| ||   u
  cuauga uuuuuuCUCCAA GGGCACA ACA AAG ag   u
aa      -            A       U   -   U  uau 


mirna_id: bta-mir-495
hairpin:
u      u          u  -       cu     - uga 
 ggugcc ggaaagaagu gc ccauguu  uuucg c   u
 |||||| |||||||||| || |||||||  ||||| |    
 cuacgg cuuUUCUUCA CG GGUACAA  AAAgc g   a
a      c          -  U       AC     a ugu 


mirna_id: bta-mir-496
hairpin:
------cc    cg      c   u        u     gu         uua 
        gagu  gguacu gaa ggagguug ccaug  guguucauu   u
        ||||  |||||| ||| |||||||| |||||  |||||||||    
        cuua  ucauga cuu cCUCUAAC GGUAC  UAUGAGUag   u
ggguacuu    aa      -   u        C     AU         uau 


mirna_id: bta-mir-500
hairpin:
      c     -U         UAC UG    AGAg   uuu 
gcuccc cucuc  AAUCCUUGC   C  GGUG    ugc   c
|||||| |||||  |||||||||   |  ||||    |||   u
cgaggg gagag  uuaggaacg   g  ccac    acg   g
      a     uc         --- gu    -gua   uaa 


mirna_id: bta-mir-502a-1
hairpin:
u        -    -           ucu      uag   -  u 
 gcccaccc cucu aauccuugcuc   gggugc   ugc ug c
 |||||||| |||| |||||||||||   ||||||   ||| ||  
 cggguggg gagA UUAGGAACGGG   UCCACG   Acg ac u
u        a    C           ---      -UA   u  c 


mirna_id: bta-mir-502a-2
hairpin:
cugcucugu  cc    aucc      aa       a    -g        
         uc  cugu    aaucuu  ugcccag ugca  guacugu 
         ||  ||||    ||||||  ||||||| ||||  |||||| c
         ag  gacA    UUAGGA  ACGGGUC ACGU  cgugacu 
-----gaau  aa    ---C      --       C    AA        


mirna_id: bta-mir-502b
hairpin:
    c - uc  -u         ucc       a  g   uuu 
gcuc c c  uc  aauucuugc   ccaggug ga ugc   g
|||| | |  ||  |||||||||   ||||||| || |||   u
cgag g g  ag  UUAGGAACG   GGUCCAC CU Acg   g
    a u ua  uC         ---       -  A   uaa 


mirna_id: bta-mir-504
hairpin:
   -g    -            G     A    -G  u   u 
gcu  cugu ugggAGACCCUG UCUGC CUCU  UC gua g
|||  |||| |||||||||||| ||||| ||||  || |||  
cgg  gaca acccuuugggac ggacg gagg  ag cau c
   ga    u            g     c    ga  u   u 


mirna_id: bta-mir-505
hairpin:
aaau      ac    u           g    a        ucua 
    ugaugc  ccag gggggagccag aagu uugauguu    c
    ||||||  |||| ||||||||||| |||| ||||||||    c
    acugcg  gguc cUCCUUUGGUC UUCA AACUGCga    a
----      -a    u           G    C        uuug 


mirna_id: bta-mir-539
hairpin:
       aG        A      G    -    -   u 
auacuug  GAGAAAUU UCCUUG UGUG Uucg cuu a
|||||||  |||||||| |||||| |||| |||| ||| u
uaugagu  uucuuuaa aggaac auac aagu ggg u
       cu        c      -    u    a   u 


mirna_id: bta-mir-541
hairpin:
-   -u     aaa        c    g uc    u   aaguu 
 acg  caggg   ggauucug uguc g  ccac cca     c
 |||  |||||   |||||||| |||| |  |||| |||      
 ugu  gucUC   CCUAAGAC ACGG U  GGUg ggu     a
g   uc     CGG        -    G --    -   aaaaa 


mirna_id: bta-mir-543
hairpin:
      u          u  -     ucuu     - uuu 
ggugcu aaggagaagu gc ccgug    uuucg c   a
|||||| |||||||||| || |||||    ||||| |   u
cuauga uuuUUCUUCA CG GGCGC    AAAgc g   a
      c          -  U     UUAC     a ugu 


mirna_id: bta-mir-544b-1
hairpin:
------u       au         -         -     cu  a 
       caccugg  agcuuguua aaaugcaga uucca  uc g
       |||||||  ||||||||| ||||||||| |||||  ||  
       guggacc  UUGAACAAU UUUACGUCU Agggu  gg u
aagcguu       -C         C         U     cc  g 


mirna_id: bta-mir-544b-2
hairpin:
------            u       --    -   u   --     g  a 
      aucaccugggga cuuguua  aaug aga ucu  gguuc gu g
      |||||||||||| |||||||  |||| ||| |||  ||||| ||  
      uaguggacuCUU GAACAAU  UUAC UCU Aga  ccggg ua g
ucaccg            -       CU    G   U   gu     g  a 


mirna_id: bta-mir-544a
hairpin:
auuuu      cua    u           -     u   -ga  c 
     caucac   ggga cuuguuaaaag gcaga ucu   uu a
     ||||||   |||| ||||||||||| ||||| |||   ||  
     guagug   ccCU GAACGAUUUUU CGUCU Aga   ag g
uaauc      -aa    U           A     U   acc  g 


mirna_id: bta-mir-551a
hairpin:
-----    a c   -  cu    cugaaacccagagcaggugaggccug 
     gggg c acc ug  gacc                          u
     |||| | ||| ||  ||||                           
     uccc g ugg AC  UUGG                          c
aaagg    - u   u  CU    UUCUAACCCAGCGggucuuugucagu 


mirna_id: bta-mir-551b
hairpin:
agagaa      c      aa         cg     - -aga    gug 
      guucuc uggccu  gaaaucaag  ugggu g    ccug   c
      |||||| ||||||  |||||||||  ||||| |    ||||    
      uaagag gucgga  CUUUGGUUC  ACCCA C    ggac   a
-----a      u      GA         AU     G GGaa    aag 


mirna_id: bta-mir-562
hairpin:
aguggaaaugcugguucauauggcaauucuaccuuuuaugag   cu   a        u 
                                          gaa  gua ggcuguuu c
                                          |||  ||| ||||||||  
                                          UUU  CAU UCGACGAA c
----------------------------------------CA   AC   G        A 


mirna_id: bta-mir-568
hairpin:
---        -     u        A         ACuucc         c 
   auauacac uauau AUGUAUAA UGUAUACAC      uauauauau c
   |||||||| ||||| |||||||| |||||||||      |||||||||  
   uaugugug auaug uacauauu auauaugug      auauauaua a
gua        g     -        -         ------         u 


mirna_id: bta-mir-582
hairpin:
----------auc   u        UUA            CA     Uaaucu 
             ugu cucuuugg   CAGUUGUUCAAC  GUUAC      a
             ||| ||||||||   ||||||||||||  |||||       
             acg gggaaacc   gucaacaaguug  caaug      c
uuacaaaagugaa   u        caa            ac     uuaauc 


mirna_id: bta-mir-584-2
hairpin:
uaggguguccaagcccug           G     GAGgaguuucuca 
                  cUGGUUUGCCU GGACU             g
                  ||||||||||| |||||              
                  gaccaaacggg cuuga             g
---------gucgagugg           a     aaggaccgaaauc 


mirna_id: bta-mir-584-3
hairpin:
uagggugacca   a   U    UGCC   G       aa   c ug 
           acu ucc GGUU    UGG ACUGAGa  uuu c  g
           ||| ||| ||||    ||| |||||||  ||| |   
           uga agg ccga    auc ugacuuu  aga g  g
----------c   c   u    -uau   a       cg   c ua 


mirna_id: bta-mir-584-4
hairpin:
gaccau   -  UG     CCU  G    A u   uu - ug 
      ccu cc  GUUUG   GG ACUG G ggu  c c  g
      ||| ||  |||||   || |||| | |||  | |  g
      gga gg  caaau   uc ugac c uca  g g  u
-----u   c  gu     ---  g    - u   gg u uc 


mirna_id: bta-mir-584-5
hairpin:
--a       -       uc UG        -      GA g -   ac 
   gggauga ccaacug  c  GUUUGCCU GGGACU  G g guu  u
   ||||||| |||||||  |  |||||||| ||||||  | | |||   
   ucuuacu gguuggu  g  caaacggg cccuga  u c cag  g
cga       u       ga gu        u      ag g a   ga 


mirna_id: bta-mir-584-6
hairpin:
uuggaugaccaaucaucuUGGUU       GA  GA  g uu    ug 
                       UGCCUGG  CU  Gg g  uccc  g
                       |||||||  ||  || |  ||||  a
                       acggacc  ga  uu u  aggg  u
---------------------gu       --  ag  g gu    ug 


mirna_id: bta-mir-584-7
hairpin:
agggugaccaacu       UUUG    G A  G   g 
             gucuUGG    CCUG G CU AGg u
             |||||||    |||| | || |||  
             caggauu    gggu u gg ucc u
-----------au       ugua    g a  g   u 


mirna_id: bta-mir-584-1
hairpin:
ucgggugaucaaccguca       CCU  G    A     uu    g 
                  UGGUUUG   GG ACUG Ggggu  cuug a
                  |||||||   || |||| |||||  |||| a
                  accgaac   uc ugac cuucg  gaac u
-----------------g       ---  g    -     --    g 


mirna_id: bta-mir-592
hairpin:
---------ua     c     cA        A    C       -     g 
           uuaug cauga  UUGUGUCA UAUG GAUGAUG Ugugu a
           ||||| |||||  |||||||| |||| ||||||| |||||  
           aaugc guacu  aacgcagu gugc cuacugc acacg u
caacacugcag     a     ac        g    a       g     g 


mirna_id: bta-mir-599
hairpin:
aaagacgugcu      -a   u                 gg     -   c 
           guccac  gug guuugauaagcugacau  gacag gga u
           ||||||  ||| |||||||||||||||||  ||||| ||| c
           uaggug  uac CAAACUAUUUGACUGUG  UUGuc cuu u
--------cag      ca   c                 --     a   u 


mirna_id: bta-mir-615
hairpin:
cuc   ag   c          UC     U        Cu    g ug 
   ggg  ggg gggagGGGGG  CCCGG GCUCGGAU  cgag g  c
   |||  ||| ||||||||||  ||||| ||||||||  |||| |  u
   ccc  ccc cccucucccu  ggguc cgagccug  gcuu u  u
--c   ca   -          cu     -        --    g ua 


mirna_id: bta-mir-628
hairpin:
auagcugu  u   a      cA  -   A   A             aaaa 
        ug guc cuuccu  UG CUG CAU UUUACUAGAGGgu    u
        || ||| ||||||  || ||| ||| |||||||||||||     
        ac cgg gaaggg  gc gac gug gaaugaucuucca    u
-------u  u   -      aa  u   g   a             auaa 


mirna_id: bta-mir-631
hairpin:
       -cca   AGA          -ACC      u 
ggggagc    guu   CCUGGCUUAG    UCAGCu c
|||||||    |||   ||||||||||    |||||| a
ccucucg    cgg   ggacugaguc    agucga c
       aaac   --g          agau      a 


mirna_id: bta-mir-653
hairpin:
-------       cu              U    GU     caugu 
       ucauucc  caGUGUUGAAACAA CUCU  UGaac     u
       |||||||  |||||||||||||| ||||  |||||     a
       aguaagg  guuacaacuuuguu gagg  acuug     c
guagaau       ag              u    uc     aagga 


mirna_id: bta-mir-654
hairpin:
     agugg           gcu     a      - uuc 
ggguu     aaagguggugg   gcaga caugug c   c
|||||     |||||||||||   ||||| |||||| |   u
cccga     uUUCCACUACC   CGUCU GUAUac g   u
     --aga           AGU     -      u ugc 


mirna_id: bta-mir-655
hairpin:
aacu   cagg      ug           u      ua      cu   c 
    guu    gauauu  aggagagguua ccgugu  uguucg  ugg u
    |||    ||||||  ||||||||||| ||||||  ||||||  |||  
    cag    cuauaa  uUCUCUCCAAU GGUACA  AUAagu  acu c
--cu   ---a      gu           U      UA      --   a 


mirna_id: bta-mir-656
hairpin:
----------cu    u      c     ag       ---   u 
            gaaa agguug cugug  guguuca   cuu u
            |||| |||||| |||||  |||||||   |||  
            cuuU UCCAAC GACAU  UAUAAgu   gaa c
cuaagcuauagc    C      U     AU       agc   u 


mirna_id: bta-mir-658
hairpin:
cccgguugc    g   c   -  --   -     cagcuuguccgcugacagc 
         cgug uug agg cc  cgg cccgc                   g
         |||| ||| ||| ||  ||| |||||                    
         gcac gac ucc GG  GCC GGGCG                   a
------gga    g   u   U  UU   U     AAGGGAGGCGGgauuaccg 


mirna_id: bta-mir-665
hairpin:
-  u   -                -   cc  g  c 
 uc ccu ugaggggucuuggccu cug  ca ga u
 || ||| |||||||||||||||| |||  || || c
 gg gga acUCCCCGGAGCCGGA GAC  gu cu u
c  c   c                U   CA  a  u 


mirna_id: bta-mir-670
hairpin:
g  u      u   u      UC       --     U  -U AA    aa 
 gu uagggg gga cugacg  CCUGAGU  AUAUG GG  G  ccgg  u
 || |||||| ||| ||||||  |||||||  ||||| ||  |  ||||  u
 cg gucccu cuu gacugu  ggacuua  uauac cc  u  gguc  u
-  c      -   -      ga       cu     u  uu gg    cg 


mirna_id: bta-mir-671
hairpin:
gc     -a      ----a    a        A   A      GA           -u   g 
  cgccg  ccuggc     ggcc ggaagagg GGA GCCCUG  GGGGCUGGAGg  gau g
  |||||  ||||||     |||| |||||||| ||| ||||||  |||||||||||  |||  
  guggu  ggaccg     ccgg ccuuuucc ccu cgggac  ucuuggccucc  uug a
-c     cg      aggug    g        a   -      --           uu   u 


mirna_id: bta-mir-708
hairpin:
cugugugugaagu   aa        A           A     C  G ------g    a 
             ggu  cugcccuc AGGAGCUUACA UCUAG UG G       guaa c
             |||  |||||||| ||||||||||| ||||| || |       |||| g
             cca  gacgggag ucuucgagugu agauc ac c       cguu a
----------auu   gg        a           c     u  g aaguaca    c 


mirna_id: bta-mir-744
hairpin:
 gu    cg    GC    C   -   U       --g  -ucacuga   u 
g  uggg  gggU  GGGG UAG GGC AACAGCA   gc        cgg u
|  ||||  ||||  |||| ||| ||| |||||||   ||        |||  
c  gcuc  ucca  cucc auc ccg uugucgu   cg        gcc u
 ug    au    -a    a   a   -       aca  caccaaag   c 


mirna_id: bta-mir-758
hairpin:
-gcc       a    --a    u      aga   c   - uuu 
    uggguac ugag   uggu gaccag   gca acg c   a
    ||||||| ||||   |||| ||||||   ||| ||| |   u
    aucuaug acuc   AUCA CUGGUC   UGU Ugc g   u
ccua       -    CCA    C      CAG   U   c ugu 


mirna_id: bta-mir-759
hairpin:
ggauuau             cc     u G   AC        A   U  Cu 
       aauaaauuaaaug  uaaac g CAG  UGCAAACA UUU GA  u
       |||||||||||||  ||||| | |||  |||||||| ||| ||   
       uuguuuaauuuac  auuug c guc  acguuugu aaa cu  a
-------             aa     u g   --        -   u  ag 


mirna_id: bta-mir-760
hairpin:
ggaggaugcugcagcg    gc  --g    c    U   UCCA        C    acc 
                uggg  gc   ucgc CCCC CAG    CCAGAGCC Ggau   u
                ||||  ||   |||| |||| |||    |||||||| ||||   u
                accc  cg   agcg GGGG GUC    GGUCUCGG Cuua   a
-gccguuuuaccucaa    aa  uaa    A    U   --UG        -    aag 


mirna_id: bta-mir-761
hairpin:
-uggcaaga                      G  A  g 
         ggaggaGCAGCAGGGUGAAACU AC CA u
         |||||||||||||||||||||| || ||  
         ccuccucgucguuucacuuuga ug gu u
acucuuaga                      g  -  c 


mirna_id: bta-mir-763
hairpin:
      gga   -gc           ga         a CA         AAC   U      
aaugau   ggu   aggcauuuccu  ggauuaaug C  GCUGGGAGG   CAG GGCcc 
||||||   |||   |||||||||||  ||||||||| |  |||||||||   ||| |||| u
uugcug   ucg   ucuguaaagga  cuuaauuac g  cgacccucc   guc ucggu 
      gag   uuu           gc         c ac         ---   -      


mirna_id: bta-mir-767
hairpin:
---uuu   uuaua            U C       UU  C      U    c 
      gua     gguuuuugcuca G ACCAUGG  GU UGAGCA Gcag a
      |||     |||||||||||| | |||||||  || |||||| |||| u
      cgu     ccaaggacgagu c ugguacc  ca acucgu uguu g
gucauu   cacug            c u       -c  u      c    c 


mirna_id: bta-mir-769
hairpin:
gacuuggugcugauucccggcgcu    c          C   U   G     u  ug 
                        cuga cUGAGACCUC GGG UCU AGCUg ga  u
                        |||| |||||||||| ||| ||| ||||| ||  u
                        gacu ggcucugggg cuc agg ucgac cu  g
cgagucuugggucuccagggcugg    u          u   u   g     c  uc 


mirna_id: bta-mir-873
hairpin:
--   u ca   G A      UG G        a  ga 
  gug g  uuu C GGAACU  U AGUCUCCU uu  a
  ||| |  ||| | ||||||  | |||||||| ||  c
  cac c  aag g ccuuga  a ucggagga aa  a
aa   c ac   g c      gu g        c  gu 


mirna_id: bta-mir-874
hairpin:
--      cug   c   a  ca        a ag  a 
  uuagcc   cgg ccc cg  ccagggua g  ag c
  ||||||   ||| ||| ||  |||||||| |  || u
  ggucgg   GCC GGG GC  GGUCCCGU C  uc c
cg      ucA   A   A  CC        - cu  a 


mirna_id: bta-mir-875
hairpin:
--      gg  UAU        U  A       uuau 
  uuagug  ac   ACCUCAGU UU UCAGGUG    u
  ||||||  ||   |||||||| || |||||||    u
  agucac  ug   uggaguca aa gguccac    a
ca      uu  ugu        u  a       uaaa 


mirna_id: bta-mir-876
hairpin:
u    ug         U                aucuaa  u 
 gaag  cugUGGAUU CUUUGUGAAUCACCAu      gc a
 ||||  ||||||||| ||||||||||||||||      ||  
 cuuc  gauacuuaa gaaacauuugguggug      ug a
a    gu         u                -----g  u 


mirna_id: bta-mir-877
hairpin:
gcucgagaa  UA      AU  C C          ggcuaagac      c  c 
         gG  GAGGAG  GG G AGGGgacacg         uggggg uc c
         ||  ||||||  || | ||||||||||         |||||| ||  
         cc  cuccuc  cc c ucuccugugu         accccc ag g
gcaugugga  --      --  u u          ------aca      c  g 


mirna_id: bta-mir-885
hairpin:
--   c     c           A  -         cu 
  ccg gcucu UCCAUUACACU CC CUGCCUCUu  c
  ||| ||||| ||||||||||| || |||||||||   
  ggc cgaga aggugaugugg gg gacggagag  c
ug   a     u           -  c         ca 


mirna_id: bta-mir-92b
hairpin:
c     cc   c    g     ga       c            uucuu 
 gggcc  ggg gggc ggagg  cgggacg ggugcaguguug     u
 |||||  ||| |||| |||||  ||||||| ||||||||||||     c
 cccgg  ucc cccg CCUCC  GCCCUGC UCACGUUAUaac     c
-     -c   -    g     -G       -            cgucc 


mirna_id: bta-mir-940
hairpin:
g      gugggc       ca         -  ug g aac   gugug 
 uggggu      ugggccc  ggagugggg cc  g c   ccu     u
 ||||||      |||||||  ||||||||| ||  | |   |||      
 acccca      guccggg  CCUCGCCCC GG  C G   gga     u
-      ------       CG         C  GU G -AA   aggag 


mirna_id: bta-mir-95
hairpin:
aa     --c   c            uu         g  a 
  cacag   ggg gcucaauaaaug  uguugaauu ag u
  |||||   ||| ||||||||||||  ||||||||| || g
  guguc   ccc CGAGUUAUUUAU  GCAACUUaa uc c
--     uca   A            GG         a  g 


mirna_id: bta-mir-96
hairpin:
ccacuac    -     gg  g cU        A      UU      ---   uc 
       cguc ugcuu  cc a  UUGGCACU GCACAU  UUGCUu   gug  u
       |||| |||||  || |  |||||||| ||||||  ||||||   |||   
       guag acgaa  gg u  aaccguga cgugua  aacgag   cgc  c
------c    g     aa  g au        -      cu      ucu   cu 


mirna_id: bta-mir-9-1
hairpin:
g    cc       -  C               G     gu  ca 
 gagg  cguuucu cU UUUGGUUAUCUAGCU UAUGa  gc  c
 ||||  ||||||| || ||||||||||||||| |||||  ||   
 cucu  guaaaga ga aaGCCAAUAGAUCGA AUAcu  cg  a
a    ca       u  -               A     gc  ag 


mirna_id: bta-mir-9-2
hairpin:
g    c     g   UC               G      ug a 
 gaag gaguu uua  UUUGGUUAUCUAGCU UAUGag  u u
 |||| ||||| |||  ||||||||||||||| ||||||  |  
 cuuc cucaa aau  aaGCCAAUAGAUCGA AUAcuu  g u
a    -     a   ga               A      cu g 


mirna_id: mmu-mir-1927
hairpin:
gua   --uuaccau        aggu    a       aaa      uug  a  ggc 
   ugu         gugcaugu    ucag ucccuag   ccagag   ca gu   u
   |||         ||||||||    |||| |||||||   ||||||   || ||    
   aca         uacguaca    AGUC AGGGAUU   GGUCUC   Gu ca   g
--a   ucucucucc        ----    -       GUA      -CA  -  agu 


mirna_id: mmu-mir-1928
hairpin:
--a  a       uu c   u     gca    cu 
   gg uagagcu  g gca uguag   agug  c
   || |||||||  | ||| |||||   ||||   
   cc auCUCGA  C CGU ACAUC   ucac  u
acc  a       -- -   U     GAg    ca 


mirna_id: mmu-mir-1929
hairpin:
        g g     U      A      A    A   gu ug a 
uuagaacu g agguc UCUAGG CUUUAU GAGC GAG  u  c g
|||||||| | ||||| |||||| |||||| |||| |||  |  | c
agucuugg u uccGG GGAUCC GAGGUA CUCG Cuc  a  g c
        g -     U      A      -    A   ac gu u 


mirna_id: mmu-mir-1930
hairpin:
--   cc         CU        C     G    cuu a 
  aug  cacggucAC  CCAUAGUA CUGCA CGUg   g c
  |||  |||||||||  |||||||| ||||| ||||   | u
  ugc  gugucGGUG  GGUGUCAU GACGU Guau   c u
cg   uu         UC        U     G    -cu u 


mirna_id: mmu-mir-1931
hairpin:
--       u -    g  agaa     aacuc      u  u   - --g      -a      
  agccauc c cuag cc    gcauu     uuugaa gc gcu c   ucaaag  ucugu 
  ||||||| | |||| ||    |||||     |||||| || ||| |   ||||||  |||| u
  uCGGUAG G GGUC GG    CGUAa     aaauuu cg cga g   aguuuc  agacg 
ac       C U    G  --AA     ccuua      -  u   a uua      cg      


mirna_id: mmu-mir-1932
hairpin:
--  -a  c   c  u  a       c  ga    c      cauu 
  gc  gg agc gg cc gccuggc cu  gucu cgaccc    a
  ||  || ||| || || ||||||| ||  |||| ||||||    a
  cg  cc ucg cc GG UGGAUCG GA  CAGG GUUGgg    c
aa  ac  c   u  c  C       C  --    C      cucu 


mirna_id: mmu-mir-1933
hairpin:
--   ug    cac       G  UUC      A   Ugu   ca 
  ucc  aucc   AGUCAUG UG   GGUCUU GUU   gac  g
  |||  ||||   ||||||| ||   |||||| |||   |||  u
  agg  uagg   UCAGUGU AC   CCAGGA Caa   uug  u
uc   gu    uUA       G  -UA      C   --u   au 


mirna_id: mmu-mir-1934
hairpin:
--       u    U UG     -   CU         gucca 
  cugggcc ucuu C  GUCCC CUG  UCGUCCUCU     g
  ||||||| |||| |  ||||| |||  |||||||||      
  gacucgg agAG G  CGGGG GGC  AGUAGGAga     a
gc       u    U GU     U   --         auugu 


mirna_id: mmu-mir-1935
hairpin:
--      g    AG        GGAU   Ug 
  acucug AGGC  AGGCUGGC    CUC  a
  |||||| ||||  ||||||||    |||  g
  ugagac ucug  uccgaccg    gag  u
ag      a    -g        ----   cu 


mirna_id: mmu-mir-1936
hairpin:
--       g aggg         ca     -   a -u     -cu  g 
  agggggu a    gaggccagu  cacag agg c  uuagu   ga a
  ||||||| |    |||||||||  ||||| ||| |  |||||   ||  
  uccccca u    cucCGGUCA  GUGUC UCC G  AAUca   uu a
ag       g ---a         -A     G   A UC     aag  a 


mirna_id: mmu-mir-1938
hairpin:
-- ug     C       C             ------uu    --u     gc 
  c  gggcg GGUGGGA UUGUAGUUCGGUC        cgcu   cggac  c
  |  ||||| ||||||| |||||||||||||        ||||   |||||   
  g  cccgu cuacccu gacgucaagucgg        gcga   gucug  c
ag gu     a       u             cauggugc    uac     aa 


mirna_id: mmu-mir-1940
hairpin:
-a   a  aug      ---   -A      A  G  AA      --     U ug 
  gcc gg   cagccu   gcu  UGGAGG CU AG  GGUGGA  GCAGU c  u
  ||| ||   ||||||   |||  |||||| || ||  ||||||  ||||| |   
  cgg cc   gucggg   uga  accucc ga uu  uuaccu  cgucg g  a
ac   -  --g      aaa   ca      a  a  gg      uc     u cc 


mirna_id: mmu-mir-1941
hairpin:
--   ca      gA           G  C   G    gggg 
  cag  gggugg  GGGAGAUGCUG UA AGA GCUU    u
  |||  ||||||  ||||||||||| || ||| ||||     
  guc  cccacc  CCCUCUAUGAC AU UCU Cggg    u
gg   ca      UA           G  -   A    aguu 


mirna_id: mmu-mir-1942
hairpin:
--g        u   ua   uu        aa 
   aagaggcc auu  aug  agacaucu  c
   |||||||| |||  |||  ||||||||   
   uucuccgG UGG  UAC  UCUGUAGA  c
aug        U   UC   -U        CU 


mirna_id: mmu-mir-1943
hairpin:
--                U    G      GAc   cu 
  ggcugggAAGGGAGGA CUGG CACCUG   cag  c
  |||||||||||||||| |||| ||||||   |||  c
  cugaccCUUCCCUCCU GACC GUGGAC   guc  u
ca                C    -      ---   cc 


mirna_id: mmu-mir-1945
hairpin:
--       c   c     u   cc    a   a   gc 
  cugaacu cga ucccg cag  cccg gaa acc  a
  ||||||| ||| ||||| |||  |||| ||| |||   
  gauuuga guu AGGGC GUC  GGGC CUU Ugg  c
uc       u   C     U   AU    G   C   gc 


mirna_id: mmu-mir-1306
hairpin:
----ca    -c       UCCCCU  A        guga   a 
      gucu  CACCACC      GC AACGUCCa    ugc g
      ||||  |||||||      || ||||||||    |||  
      cagG  GUGGUGG      CG UUGCAggu    aug a
gccuga    UA       ---UCU  G        ---a   g 


mirna_id: mmu-mir-1946a
hairpin:
--   -uu    --aaaucuau       C         A  CA     a   ---ccaa       gag 
  aac   aaag          AGCCGGG AGUGGUGGC CA  CUUUU auc       cacuugu   g
  |||   ||||          ||||||| ||||||||| ||  ||||| |||       |||||||   c
  uug   uuuc          ucggcuc ucaccaccg gu  ggaaa uag       guggacg   a
aa   uuu    cucuccucuu       -         c  ac     c   ucuuuag       gac 


mirna_id: mmu-mir-1947
hairpin:
--  aca   ug       AC         G      -Gc  a 
  ga   agg  guggAGG  GAGCUAGCU AGUGCU   ag c
  ||   |||  |||||||  ||||||||| ||||||   || a
  cu   ucc  uaCCUCC  CUCGAUCGA UCACGa   uc c
aa  -cg   cg       CU         G      gaa  u 


mirna_id: mmu-mir-1948
hairpin:
              A       A               gug 
auucucaccuuacu UAUGAGU UUCUGCCUAAAUgug   u
|||||||||||||| ||||||| |||||||||||||||   a
uaagaguggaauGA AUGCUCA GAGACGGAUUUacau   c
              C       C               agg 


mirna_id: mmu-mir-1949
hairpin:
--    -             gcc     c  gc  c 
  gcug guuggcauucugg   ugguu au  ca c
  |||| |||||||||||||   ||||| ||  ||  
  UGAU CGACUGUAGGACC   AUCaa ug  gu u
gU    A             -AU     u  uu  c 


mirna_id: mmu-mir-1950
hairpin:
             C      U        uu  uug 
gcuuuuUCUGCAU UAAGGA AUGGUCAu  aa   u
||||||||||||| |||||| ||||||||  ||    
cgaaaaagacgua auuccu uacuagua  uu   u
             a      c        cc  uuu 


mirna_id: mmu-mir-669l
hairpin:
--    --   c     c     GU  U     C              au 
  guuu  gug augug guauA  UG GUGUG AUGUAUAUGUgugu  a
  ||||  ||| ||||| |||||  || ||||| ||||||||||||||   
  caag  uac uacgc caUAU  AC CACAC UACAUAUAcauaua  u
ca    ua   u     a     AU  C     A              ag 


mirna_id: mmu-mir-669m-1
hairpin:
u   --     a   g      gu        C     C    G   AU 
 gua  ugugc ugu uguaua  uuUGUGUG AUGUG AUGU UGU  a
 |||  ||||| ||| ||||||  |||||||| ||||| |||| |||   
 cau  acacg acg acaUAU  AAACACAC UACAU UAca aua  u
a   ag     a   a      AC        C     A    g   ag 


mirna_id: mmu-mir-669m-2
hairpin:
--     --       g      gu        C     C        AU 
  auauu  ugcaugu uguaua  uuUGUGUG AUGUG AUGUGUGU  a
  |||||  ||||||| ||||||  |||||||| ||||| ||||||||   
  uauag  acguacg acaUAU  AAACACAC UACAU UAcauaua  u
ca     ac       a      AC        C     A        ag 


mirna_id: mmu-mir-669o
hairpin:
-  ca     a     g    GU        C     U        au 
 ug  ugugc ugugu uaUA  UGUGUGUG AUGUU AUGUgugu  u
 ||  ||||| ||||| ||||  |||||||| ||||| ||||||||   
 ac  acacg acaca aUAU  ACACACAC UACAA UACAuaua  u
c  ac     a     a    GC        A     -        ag 


mirna_id: mmu-mir-1951
hairpin:
--u   ug  -       aaa -    uc        u    c gaa 
   ggg  gg gguuuag   c cacc  ucuucacu acuu u   a
   |||  || |||||||   | ||||  |||||||| |||| |    
   ucc  uc ccaaAUC   G GUGG  AGAGGUGA UGga a   g
ccc   gu  u       --G U    UC        -    a auu 


mirna_id: mmu-mir-1952
hairpin:
--  c      a   a  -     CCU    CU u     cu 
  cc ucucuu uug UC UCCAC   CCUU  G gcagg  u
  || |||||| ||| || |||||   ||||  | |||||  a
  gg agagaa aac ag aggug   ggaa  c cgucc  u
aa  u      -   -  u     --u    -c u     uu 


mirna_id: mmu-mir-1953
hairpin:
--  u      u  ucuU   A  G   U   G      agaa  u 
  gg gcugcc gg    GGG AA UUC CAG CUUCUG    uu g
  || |||||| ||    ||| || ||| ||| ||||||    || c
  cc cgacgg cc    ccc uu gag guc gaagac    ag a
au  -      u  uucu   c  g   u   g      ---g  g 


mirna_id: mmu-mir-1954
hairpin:
g   uc      aA     G  U           guuuguuu 
 agg  agccag  CUGCA AG GAGACCCUGUU        g
 |||  ||||||  ||||| || |||||||||||         
 ucc  ucgguc  gaugu uc cuuuggggcag        u
a   ua      cc     g  u           aguuuguu 


mirna_id: mmu-mir-1955
hairpin:
--   -guuu   u      A       G     C   AG   UU   ua 
  cug     acu acuaca GUCCCAG AUGCA UGC  CUU  ucu  a
  |||     ||| |||||| ||||||| ||||| |||  |||  |||  c
  gau     ugg ugaugU CAGGGUC UACGU ACG  Gaa  aga  u
ac   aaauu   u      A       G     U   -A   -u   cu 


mirna_id: mmu-mir-669n
hairpin:
     U  -    U     UG    ua 
uacAU UG UGUG GGAUG  UGUg  a
||||| || |||| |||||  ||||   
gugua ac acac ccuac  guau  a
     c  g    -     gu    gu 


mirna_id: mmu-mir-1956
hairpin:
--  ucA       -   G      C      cc 
  cu   GUCCAGG GCU AGUCAG GGAgcc  g
  ||   ||||||| ||| |||||| ||||||   
  ga   caggucc cgg ucgguc cuucgg  a
cg  -ug       a   -      c      ug 


mirna_id: mmu-mir-1957a
hairpin:
--    aaagu       U   AGA       A 
  cugg     agcuCAG GGU   GCAUAUG C
  ||||     ||||||| |||   ||||||| c
  gacc     uugaguc ccg   cguguac a
ac    ccuau       -   gaa       g 


mirna_id: mmu-mir-1958
hairpin:
--                                      uuuaauuu 
  agccuagaagagaacuuacugcuuccacuuuccuauag        c
  ||||||||||||||||||||||||||||||||||||||        u
  uuggaucuucucuUGAAUGACGAAGGUGAAAGGAUauc        a
cc                                      uuacguca 


mirna_id: mmu-mir-1960
hairpin:
     u   c  C         U           gagag 
cagag gag ag CAGUGCUGU AGAAGAGGGCU     c
||||| ||| || ||||||||| |||||||||||      
gucuc cuu uc gucacgacg ucuucucucga     a
     -   u  a         -           gaggg 


mirna_id: mmu-mir-1961
hairpin:
--   ag    aucu       -   -  gc    cc     ccuauac  c        a 
  gcu  ccau    gaaguuc aac ac  ccuc  cucuu       gu uauggagg u
  |||  ||||    ||||||| ||| ||  ||||  |||||       || |||||||| u
  cga  ggua    uuucAAG UUG UG  GGAG  gagag       ca auaccucc u
aa   --    ---c       A   A  AU    Ua     ----uuc  u        a 


mirna_id: mmu-mir-1962
hairpin:
--  ug  -auuu   a   augua        gug      uc    u        cuc uuc 
  ug  gc     gca acu     gucaguca   guccca  uguc gccucucu   g   a
  ||  ||     ||| |||     ||||||||   ||||||  |||| ||||||||   |    
  ac  cg     cgu ugg     uagucagU   CAGGGU  ACGG CGGAGAgg   c   g
ug  gu  ccccu   a   -----        ACA      -C    U        uac uuu 


mirna_id: mmu-mir-1963
hairpin:
-cU        AUCA    G      ug   
   GGGACGAG    UGAG CCUUCc  gc 
   ||||||||    |||| ||||||  | c
   cccuguuc    gcuc ggaagg  ca 
acg        -ccg    a      gu   


mirna_id: mmu-mir-1964
hairpin:
--       g            A  A   C     cc   g 
  cuuucuu cgaAGCUGGAGC CA AAG CGGUG  ggu u
  ||||||| |||||||||||| || ||| |||||  ||| g
  gaaggaa gUUUCGGCCUCG GU UUC GCCac  ccg a
ag       g            G  C   A     au   u 


mirna_id: mmu-mir-1965
hairpin:
--            c   -       cu uu     guuuu        c       ccauc   u 
  ggcuugcgccac aug ccuggcu  u  guuuu     auugugau cuagauc     aug g
  |||||||||||| ||| |||||||  |  |||||     |||||||| |||||||     |||  
  ccgaACGCGGUG UGC GGGCCGA  g  caagg     uaacacua gauuuag     uac a
uu            A   C       Au uc     ---ac        c       --auc   a 


mirna_id: mmu-mir-1966
hairpin:
-- u    u      g  A   ---A   G   C   A      Cc    au     c 
  g agaa aguguu gA GGG    GCU GCU AGG GAGAGU  ugag  uuagg u
  | |||| |||||| || |||    ||| ||| ||| ||||||  ||||  ||||| c
  c ucuu ucgcaa uu ccu    uga cGA UCC CUCUCA  ACUC  AGUCU U
ag u    -      g  a   gaac   a   U   -      --    --     U 


mirna_id: mmu-mir-1967
hairpin:
  --u         u    u      uu c     u  ucu 
cc   gaauucugu ucuu cucucu  g uccuu ug   g
||   ||||||||| |||| ||||||  | ||||| ||   a
gg   cuuaagaCG AGAA GAGGGG  C AGGAG ac   c
  ucc         U    -      UC U     U  uua 


mirna_id: mmu-mir-1968
hairpin:
      cU        UA   A      -A   u 
ccuccu  GCAGCUGU  AGG UGGUGG  CUa u
||||||  ||||||||  ||| ||||||  |||  
ggagGA  UGUCGACG  UCC ACCAcc  gau g
      AU        UC   -      gg   u 


mirna_id: mmu-mir-1969
hairpin:
aua   -   g     gA        A UUUAA        cuc    aa 
   gug cua aggcu  AGAUGGAG C     CAUGGGUg   uuaa  u
   ||| ||| |||||  |||||||| |     ||||||||   ||||   
   uac gau ucugg  uuuaccuc g     guaccuac   aauu  c
-ac   a   g     uc        c ---uc        ---    gu 


mirna_id: mmu-mir-1946b
hairpin:
--               c             --a      -----agag  aa  -      ua   g c 
  gggauuaaaggcgug gccaccacugccc   gcuuuc         ug  uu ugaggc  ucu g u
  ||||||||||||||| |||||||||||||   ||||||         ||  || ||||||  ||| | a
  cccuaaUUUUCGUAC CGGUGGUGACGGG   ugaaag         au  ga acuucg  aga u u
ga               A             CCG      gggaaaaga  gg  c      uc   g a 


mirna_id: mmu-mir-1970
hairpin:
--   g    uu  ---u      -aaU           GA A    UU   g  u 
  gau ugca  gu    ggagga    GUGUCACUGGG  U GGCU  Gag uu c
  ||| ||||  ||    ||||||    |||||||||||  | ||||  ||| ||  
  cua acgu  cg    ccuucu    cacggugaucc  a cuga  cuc aa a
uc   g    -c  uugu      cacu           gg -    --   g  g 


mirna_id: mmu-mir-1971
hairpin:
gcaucauuugGUAA   C          ---     ucu       a    ccc      u  g 
              AGG UGGGCUGAGA   ggaca   uuguucc ugga   aguaga ag c
              ||| ||||||||||   |||||   ||||||| ||||   |||||| ||  
              ucu aucugacuuu   ucugu   aacaagg accu   ucgucu uc a
--------------   -          uug     -uc       -    ---      -  g 


mirna_id: sly-MIR156a
hairpin:
U         -           u     --   u     aauuuca   a 
 UGACAGAAG AUAGAGAGCAC aauga  uga augcu       uuc a
 ||||||||| ||||||||||| |||||  ||| |||||       ||| u
 acugucuuc uaucucucgug uuacu  acu uacga       ggg u
u         g           u     ua   c     aaacgac   u 


mirna_id: sly-MIR156b
hairpin:
U         -       G     au   -       uaauu 
 UGACAGAAG AUAGAGA CACga  aau gaggugc     g
 ||||||||| ||||||| |||||  ||| |||||||      
 acugucuuc uaucucu guguu  uua uuccacg     g
u         a       a     cc   a       ucgaa 


mirna_id: sly-MIR156c
hairpin:
U          UA           -uaac       uaauu 
 UGACAGAAGA  GAGAGCACgaa     gaggugc     g
 ||||||||||  |||||||||||     |||||||      
 acuguuuucu  cucucguguuu     uuccacg     g
u          ua           cuuaa       uacaa 


mirna_id: sly-MIR159
hairpin:
           ga       c   aa   u    ---   u    u     g     c    g uu   c  c        uu    auu 
uggagcuccuu  aguccaa aaa  auc aaca   ggu aaau gagcu cugac uaug a  ccu ag ccuaucua  uaug   u
|||||||||||  ||||||| |||  ||| ||||   ||| |||| ||||| ||||| |||| |  ||| || ||||||||  ||||    
AUCUCGAGGGA  UUAGGUU uuu  uag uugu   cca uuua uucga gacug auac u  ggg uu ggauagau  auac   c
           AG       U   ac   u    uuc   u    u     g     u    g uu   u  u        --    aaa 


mirna_id: sly-MIR162
hairpin:
ca   g    c   acc       c     cuggaa    -   auauau 
  gga gcag ggu   auugauc guucc      gcug aau      a
  ||| |||| |||   ||||||| |||||      |||| |||      u
  CCU CGUC CCA   UAGCUgg uaagg      cgac uua      a
GA   A    U   -AA       c     --aaaa    a   caacgc 


mirna_id: sly-MIR172a
hairpin:
   ug    a          a     aaa   g    --- ug     a     g 
aug  gcau aucaagauuc cguga   guu caaa   u  guuau uaauu a
|||  |||| |||||||||| |||||   ||| ||||   |  ||||| ||||| u
UAC  CGUA UAGUUCUAAG gcacu   caa guuu   g  cggua auuaa g
   GU    G          A     ---   a    auc gu     -     a 


mirna_id: sly-MIR172b
hairpin:
                    a   -a     auuaag     a     aau     gcuuua    gaa 
auguagcaucaucaagauuc uac  ugaaa      aggca gguua   augua      auuu   a
|||||||||||||||||||| |||  |||||      ||||| |||||   |||||      ||||    
UACGUCGUAGUAGUUCUAAG gug  acuuu      ucugu ccagu   uauau      uaaa   u
                    A   aa     -auuua     a     -ac     --aaua    aag 


mirna_id: sly-MIR319
hairpin:
-       -         cac       a ga    gu        --  g   ac       uc  aa         ----    a 
 gagcuuc uuuagucca   augggga c  uagg  ucaauuug  cu ccg  ucauuca  ca  uguugaggu    cuug u
 ||||||| |||||||||   ||||||| |  ||||  ||||||||  || |||  |||||||  ||  |||||||||    |||| a
 CUCGAGG AAGUCAGGU   uguccuu g  guuc  aguugaac  ga ggc  aguaagu  gu  acgacucca    gagc a
C       G         UCa       c -a    ug        au  g   ga       ga  ca         ccgu    u 


mirna_id: sly-MIR399
hairpin:
      u  a    a       -g  a  ug uca 
uagggc ac cucu uuggcau  ca cu  a   a
|||||| || |||| |||||||  || ||  |    
AUCCCG UG GAGG AACCGUa  gu ga  u   a
      U  A    A       aa  c  gu uau 


mirna_id: jcv-mir-J1
hairpin:
    cac      c     A   C    AA     Uu  g    u 
ucug   cagagg UUCUG GAC UGGG  AAGCA  gu auug g
||||   |||||| ||||| ||| ||||  |||||  || |||| a
agac   gucuuC GAGAC CUG ACCU  UUCGU  cg ugac u
    uuc      U     -   U    AG     uu  -    u 


mirna_id: bkv-mir-B1
hairpin:
    aucuucag   gg       uA    A   U    AA        u   u 
ggga        cag  gcugaag  UCUG GAC UGGG  GAGCAUug gau g
||||        |||  |||||||  |||| ||| ||||  |||||||| |||  
uccu        guc  ugacuuC  AGAC CUG ACCU  UUCGUgac uua g
    ------aa   uu       UG    -   U    AG        -   g 


mirna_id: hsa-mir-1972-1
hairpin:
          u     caca        a   guguc 
uauaggcaug gccac    ccuggcuu aau     a
|||||||||| |||||    |||||||| |||     u
auguccguAC CGGUG    GGACCGGA Uua     u
          U     ACAC        C   aaaau 


mirna_id: hsa-mir-1973
hairpin:
      - aacg  c     au 
uauguu c    gc auggu  c
|||||| |    || |||||   
AUACGA G    CG UGCCA  c
      U GAAA  -     gu 


mirna_id: hsa-mir-1976
hairpin:
          a        uc uaa 
gcagcaagga ggcagggg  c   g
|||||||||| ||||||||  |    
UGUCGUUCCU CCGUCCUC  g   g
          C        Cu ugu 


mirna_id: mmu-mir-1983
hairpin:
---ccuuuaca                 ---u   --------    --     uag   g g    u     a 
           gagaaagcaugcuccag    ggc        gcaa  ucggu   cgc c guac uauac g
           |||||||||||||||||    |||        ||||  |||||   ||| | |||| |||||  
           uUCUUUUGUACGAGGUC    Ccg        uguu  agccg   gug g cgug auaug c
ccgccuuuccc                 CACU   agcuugag    gg     -ua   - g    u     a 


mirna_id: mmu-mir-1839
hairpin:
---------gaaAA         AAC        uu gca 
              GGUAGAUAG   AGGUCUUG  u   a
              |||||||||   ||||||||  |   a
              CCAUCUAUU   UCCAGAac  a   a
uccguuacCGACAA         -CA        uu aau 


mirna_id: mmu-mir-1981
hairpin:
---G       UG  C     CG    cu   g ug     u 
    UAAAGGC  GG UUAGA  UGGC  uug g  uggaa g
    |||||||  || |||||  ||||  ||| |  ||||| c
    GUUUCCG  CC AAUCU  ACcg  aau u  gccuu a
gaCA       GU  C     --    cc   g uu     c 


mirna_id: mmu-mir-1982
hairpin:
guugguauugcU      GG CCU   -      aguuc   c 
            UGGGAG  U   GGG GAGGgg     ugg a
            ||||||  |   ||| ||||||     |||  
            ACCCUC  G   CCC CUCUcc     acc c
---------GAC      UU UAU   A      ----a   c 


mirna_id: bmo-mir-12
hairpin:
------u    -      A  -UC   UA   -    uauuaaauaaaa 
       ucUG AGUAUU CU   AGG  CUG GUug            a
       |||| |||||| ||   |||  ||| ||||            a
       aggc uuauag ga   ucc  gac caau            c
agcauuu    a      a  uaa   --   a    uauugaauaagg 


mirna_id: bmo-mir-137
hairpin:
uaac  -g    ga  uc   c       ug  g   u    - aua 
    ac  cuug  gg  acg guauucu  gg aau aaca c   u
    ||  ||||  ||  ||| |||||||  || ||| |||| |    
    ug  gaac  uc  UGC CAUAAGA  UC UUA UUgu g   g
---a  ag    ag  gA   A       GU  G   -    a agu 


mirna_id: bmo-mir-190
hairpin:
ga      c     c   --           A    U   U    g 
  gccgcg gucgu gAG  AUAUGUUUGAU UUCU GGU guuu u
  |||||| ||||| |||  ||||||||||| |||| ||| |||| u
  cggcgc cagca CUC  UAUACAAACUA AGGG CCa uagg u
-c      -     U   AU           -    C   c    u 


mirna_id: bmo-mir-285
hairpin:
ugu        u  ca    u         u   ga    uu u 
   ccauguuu ga  acug auucgagug gug  agag  u a
   |||||||| ||  |||| ||||||||| |||  ||||  | a
   ggugcaag cu  UGAC UAAGCUUAC CAC  Ucuc  a a
auu        -  CG    U         -   GA    cu a 


mirna_id: bmo-mir-92b
hairpin:
  g         cu    a  c    a       acguu      
gc guggccacg  uagg cg gauu gguguaa     ugugu 
|| |||||||||  |||| || |||| |||||||     |||| u
cg caccggugu  GUCC GC CUAA CCACGUU     auacu 
  a         cC    G  C    -       AAacu      


mirna_id: bmo-mir-927
hairpin:
-u    ccu     c          CU       A  guu  ca 
  gcag   uuuug UUUAGAAUUC  ACGCUUU CC   gc  a
  ||||   ||||| ||||||||||  ||||||| ||   ||   
  cguc   aaagc aAAUCUUAGG  UGCGAAA gg   ug  g
ac    aau     a          UU       C  -gu  au 


mirna_id: bmo-mir-929
hairpin:
--------------------u     A       UAG         -  u 
                     guuaa UUGACUC   UAGGGAGUC Cg u
                     ||||| |||||||   ||||||||| || c
                     cAGUU GACUGAG   AUCCCUCag gc c
gcagcuaaaucguaguuucuu     G       CUA         c  g 


mirna_id: bmo-mir-932
hairpin:
-----------     ga       A       G   A      --u  a 
           guguu  ggcuUCA UUCCGUA UGC UUGCAG   gc u
           |||||  ||||||| ||||||| ||| ||||||   || g
           uacgg  ucggagu agggcgu acg aacguc   cg c
caucaauuccg     ag       g       g   -      cac  u 


mirna_id: bmo-mir-9b
hairpin:
-gac      ac            UA  C      UA   a  ga 
    ggcgcg  gcgauGCUUUGG  AU UAGCUU  UGA cg  a
    ||||||  ||||||||||||  || ||||||  ||| ||   
    ccgcgc  cgcuGCGAAACC  UA AUCGAG  Acu gu  u
cggc      ga            GC  A      GC   -  ag 


mirna_id: bmo-mir-iab-4
hairpin:
gc    c       -            U    C   A u   cg 
  gucg cuucugu ACGUAUACUGAA GUAU CUG g gcg  a
  |||| ||||||| |||||||||||| |||| ||| | |||  u
  cagu gaagaCA UGCAUAUGACUU CAUA GGC c ugu  u
ca    a       A            C    U   - -   uc 


mirna_id: bmo-mir-278
hairpin:
    c     c    cC        CU     G U     gaca 
guau aagug uacg  CGGACGAA  UCCCA C CGGcc    a
|||| ||||| ||||  ||||||||  ||||| | |||||     
caua uucgc augU  GCCUGCUU  AGGGU G GCUgg    u
    -     u    UU        CU     - -     ggac 


mirna_id: bfl-let-7a-2
hairpin:
agacac g    a  ug   U   G                  agaagua  u 
      g gugc cc  agg GAG UAGUAGGUUGUAUAGUUg       ca c
      | |||| ||  ||| ||| ||||||||||||||||||       ||  
      c uacg gg  ucc cuc aucguccaacgugucaau       gu a
-----c g    -  gu   u   g                  ---agag  u 


mirna_id: bfl-mir-1
hairpin:
----cca          g    A            U  C      ugaa 
       ggccuguuaa cauA GUACUUCUUUAC AU CCAUac    c
       |||||||||| |||| |||||||||||| || ||||||    u
       ucggacgauu gUAU UAUGAAGAAAUG UA GGUaug    c
ugcacca          g    G            -  A      uuaa 


mirna_id: bfl-mir-7
hairpin:
-    u     U        A       UGU      g  u 
 gugu cugua GGAAGACU GUGAUUU   UGUugu ug c
 |||| ||||| |||||||| |||||||   |||||| || u
 uacg ggcau ccuucuga cacuaaa   acaaca ac u
c    u     u        -       -ug      a  g 


mirna_id: bfl-mir-10a
hairpin:
--      -     C      UC          -uga    
  cuauau gUACC UGUAGA  CGAAUUUGUG    ggu 
  |||||| ||||| ||||||  ||||||||||    || a
  gaugua UAUGG ACGUCU  GCUUAAACac    ccc 
cc      a     -      UU          ugaa    


mirna_id: bfl-mir-10b
hairpin:
--ac    - g           a    C   G A   G        Ucgcu 
    guuu u guggucuauau AACC UGU G UCC AUCUUGUG     a
    |||| | ||||||||||| |||| ||| | ||| ||||||||     u
    cgaa a caccagauaua uugg aca u agg uggaacac     a
ccua    u g           c    -   g c   g        caaaa 


mirna_id: bfl-mir-10c
hairpin:
ucc     -a   C          C   C     gucac 
   ccagg  uUA CCUGUAGAUC GGA UUGUg     u
   |||||  ||| |||||||||| ||| |||||      
   gguuc  gau ggacauuuag ccu aacac     u
aac     cg   a          -   a     acuac 


mirna_id: bfl-mir-22
hairpin:
ua     a                AAC       CUG     a 
  cccug gaggcguAGCUCUUCA   GGUAGCU   ugguu c
  ||||| ||||||||||||||||   |||||||   |||||  
  gggac cuucgUGUCGAGAAGU   CCGUCGA   acuag c
ac     -                AGA       --A     u 


mirna_id: bfl-mir-29a
hairpin:
uccugggaau         g  -           GU          uagaa 
          ucugugcac ga aGCUGAUUUCA  UGGUGCUAGA     g
          ||||||||| || |||||||||||  ||||||||||     u
          ggauacgug cU UUGACUAAAGU  ACCACGAUcu     c
---------c         g  A           AU          ugcgg 


mirna_id: bfl-mir-29b
hairpin:
cacugcagguuuu   -         -       C        G G     ggc 
             cua uccuggaag ACUGGUU CAAGUGGU G UAGAu   a
             ||| ||||||||| ||||||| |||||||| | |||||   c
             gau aggacuUUC UGACUAA GUUUACCA C Aucua   u
-------------   c         G       A        - G     gag 


mirna_id: bfl-mir-31
hairpin:
-----ugac    --g   a          AGA   UG         -  ug a 
         ggag   gcg ggaaaUGGCA   UGU  GCAUAGCUG Uu  g g
         ||||   ||| ||||||||||   |||  ||||||||| ||  |  
         ccuc   ugc ccUUUACCGU   ACA  CGUGUCggc gg  c u
caacauuau    acu   -          CAA   GU         u  gu u 


mirna_id: bfl-mir-33-2
hairpin:
aca     ug  a   -                     gug aa 
   ccugu  cu ggG UGCAUUGUAGUUGCAUUGCAU   c  c
   |||||  || ||| |||||||||||||||||||||   |   
   ggacg  ga ccc acgugacgucaauguaacgug   g  a
caa     ga  -   g                     -aa ac 


mirna_id: bfl-mir-34a
hairpin:
------ugguuac          c     C      G    C    C   Ucu 
             cuguguguug ugUGG AGUGUG AUAG UGGC GUU   a
             |||||||||| ||||| |||||| |||| |||| |||    
             ggcacacaau augcc ucacac uguc accg caa   a
ggcacaacauuca          a     c      a    -    a   uau 


mirna_id: bfl-mir-71
hairpin:
-    uag      c   a    -        U   U    A   uu  au 
 gcua   uugcca cac uugU GAAAGACA GGG AGUG GAU  gu  c
 ||||   |||||| ||| |||| |||||||| ||| |||| |||  ||  a
 cgau   gacggu gug aACA CUUUCUGU CCC UUAC Cua  ua  u
a    -uu      u   g    A        -   U    C   uu  ag 


mirna_id: bfl-mir-92a-1
hairpin:
ca  u   --gu   cu      c     a    u    g       u   a 
  ca auu    gcc  gucaga agguc ggau ggug caaugcu aua a
  || |||    |||  |||||| ||||| |||| |||| ||||||| |||  
  gu uga    ugg  uagucU UCCGG CCUG UCAC GUUAUga ugu c
-c  c   aaau   -u      U     C    U    -       c   g 


mirna_id: bfl-mir-92b
hairpin:
-aagauac     u   g        U    -   U     C    uu     
        ggcgu guu cuuAGGUC GGAC AGU GCAAU UUcg  cugu 
        ||||| ||| |||||||| |||| ||| ||||| ||||  ||| u
        ccgcg caa gAGUCCGG CCUG UCA CGUUA aagc  gacu 
acuuuuaa     c   a        C    C   -     C    -c     


mirna_id: bfl-mir-96
hairpin:
--ccug  -u     uu   c               C     U   gg   g 
      cc  cuuuc  gcu ugUUUGGCACUAGCA AUUUU GCU  gca g
      ||  |||||  ||| ||||||||||||||| ||||| |||  |||  
      gg  gaaag  cga aUAAACCGUGAUUGU UAAAA Cgg  ugu u
cauuca  cc     uc   c               -     C   -a   g 


mirna_id: bfl-mir-100
hairpin:
----    aaa   -g c  c    A         UC   A      Uu  u 
    agau   gcc  g ug caua ACCCGUAGA  CGA CUUGUG  gc u
    ||||   |||  | || |||| |||||||||  ||| ||||||  ||  
    ucua   cgg  c ac guaU UGGGUAUCU  GCU GAACac  ug c
cacg    caa   ga u  u    C         GU   C      -u  a 


mirna_id: bfl-mir-124
hairpin:
cggcaaaucuc    ug c    A        G   GU        ua    
           ggcu  g ucuu GUGUUCAC GCG  CCUUAAUu  aca 
           ||||  | |||| |||||||| |||  ||||||||  || u
           ccgg  c agAA CGUAAGUG CGC  GGAAUuaa  ugu 
--acuccuaaa    ga a    C        G   AC        cg    


mirna_id: bfl-mir-125a
hairpin:
---aucuguu       -  -    -     U    C            u  c 
          ggugugu uc ccca uUCCC GAGA CCUAACUUGUGA gu c
          ||||||| || |||| ||||| |||| |||||||||||| || a
          ccgcaua ag gggU GAGGG UUCU GGAUUGGACAcu cg u
acuucaccuc       c  u    C     -    A            -  g 


mirna_id: bfl-mir-133
hairpin:
aguauca gg --   u      a       acauu  a        aacuc 
       g  a  ugc gugcua agcuggu     gg accaaauc     c
       |  |  ||| |||||| |||||||     || ||||||||      
       c  u  acg uacgAU UCGACCA     CC UGGUuuag     u
---cgaa uu uc   u      G       ACUUC  C        guaac 


mirna_id: bfl-mir-137
hairpin:
gauaaa       u           g       ug   u         cu 
      uacgcac gcucggucacg guauucu  ggu aauaauaua  a
      ||||||| ||||||||||| |||||||  ||| |||||||||  u
      gugugug ugagucAGUGC CAUAAGA  UCG UUAUuauau  u
cucaga       -           A       GU   -         cu 


mirna_id: bfl-mir-182a
hairpin:
aaucauuugggcuu           C   A U           -    --  aaa  g 
              aauuugCUUGG ACU G GGAAUUCUUUG uuca  gg   ca u
              ||||||||||| ||| | ||||||||||| ||||  ||   || g
              uuaaacgaacc uga c ccuuaagaaac gagu  cc   gu c
--------------           a   c -           u    ua  gag  a 


mirna_id: bfl-mir-183
hairpin:
-----c  cgug     u      c      --     U     U     aucg 
      ca    cccgu cacggu UAUGGC  ACUGG AGAAU CACUg    u
      ||    ||||| |||||| ||||||  ||||| ||||| |||||    a
      gu    gggcg gugcca auaccg  ugacu ucuua gugac    g
cuacua  caaa     -      c      ac     -     -     caca 


mirna_id: bfl-mir-184
hairpin:
--cuccug    u     cu         C    U   -   ---A     ug 
        guuc gcacg  CCCUUAUCA UUCU CCG CCG    Gcucg  u
        |||| |||||  ||||||||| |||| ||| |||    |||||   
        caag cgugc  GGGAAUAGU AAGA GGC GGU    ugagu  c
ccuaacca    c     cc         C    -   A   cgac     cu 


mirna_id: bfl-mir-190
hairpin:
----aagcac     u  uc     G             -       Uuaac 
          ugugg gu  ugggU AUAUGUUUGAUAU UUGGUUG     u
          ||||| ||  ||||| ||||||||||||| |||||||      
          auacc cg  accua uauacaaacuaua aaccaac     u
accgacacac     c  ga     g             u       cuauc 


mirna_id: bfl-mir-193a
hairpin:
c   c     aaa     c     a    c  ugu u 
 aug ucaau   gacuu agggg cagu gg   c a
 ||| |||||   ||||| ||||| |||| ||   | g
 ugc aGUUG   CUGAA UCCCC GUCA cc   g c
u   -     GCC     U     G    U  uuu a 


mirna_id: bfl-mir-200a
hairpin:
--gacau uu       uuc   a    -     u     c   -c      u 
       g  agcuuga   cug cauc uuacu ggcag auu  gaugug u
       |  |||||||   ||| |||| ||||| ||||| |||  ||||||  
       c  uugaacu   gac GUAG AAUGG CCGUC UAA  uuauac u
ugacacu cu       ---   C    U     U     A   Ac      c 


mirna_id: bfl-mir-200b
hairpin:
aca      g      g       -           cau     -    g 
   guuugg aucucg caacauc uuaccaggcag   uuagu uuuu a
   |||||| |||||| ||||||| |||||||||||   ||||| ||||  
   caaacu uggggu gUUGUAG AAUGGUCUGUC   AAUca aagg a
uga      -      g       U           -AU     u    a 


mirna_id: bfl-mir-200c
hairpin:
aucuaac   -        g       -     u     gu      ggu 
       aug gcggaguu ugucauc uuacc ggcag  uuagau   u
       ||| |||||||| ||||||| ||||| |||||  ||||||   c
       uac cgccucag gcaGUAG AAUGG CUGUC  AAUcua   u
------a   a        g       U     U     AC      ggg 


mirna_id: bfl-mir-210
hairpin:
---acag          g    C   U     U        A  u  --   g 
       uuggucggug cauu GCC CUGUU CGCGCGCA GA gu  gau u
       |||||||||| |||| ||| ||||| |||||||| || ||  |||  
       aaccggccac guAG CGG GACAG GUGCGUGU cu cg  cug u
gcugcaa          -    U   C     U        C  -  uc   a 


mirna_id: bfl-mir-216
hairpin:
ugg   u UA         G   A       ucuaac 
   uug g  AUCUCAGCU GCA CUGUGAG      u
   ||| |  ||||||||| ||| |||||||       
   aac C  UAGGGUCGA CGU GGCACuc      u
uca   U GC         A   -       cuacac 


mirna_id: bfl-mir-217
hairpin:
c    a   C     C      U      Aug g 
 uggg cUA UGCAU AGGAAC GAUUGG   g a
 |||| ||| ||||| |||||| ||||||   |  
 acuc ggu acgua uccuug cuaacu   c u
c    -   -     c      u      aaa a 


mirna_id: bfl-mir-242
hairpin:
aug          c  U       C UU        U  cug 
   gccguccaag gu GCGUAGG G  GUGCACAC GU   g
   |||||||||| || ||||||| |  |||||||| ||    
   cggcagguuu ca ugcgucc c  caugugug ca   u
gua          a  c       u uc        c  aua 


mirna_id: bfl-mir-252a
hairpin:
-a   --     --    cc     C           G C     U  - ugu 
  gug  auugu  ccug  ccaug UAAGUACUAGU C GCAGG GU c   u
  |||  |||||  ||||  ||||| ||||||||||| | ||||| || |    
  cac  uaaua  ggac  ggugc auucgugguca g cgucc ca g   u
cc   cg     au    aa     a           - a     c  u uua 


mirna_id: bfl-mir-252b
hairpin:
----    gcgacug       gC       U     C      A ugcu     c 
    gaaa       ucucugu  UAAGUAG ACUGC GCAGGG G    gugga u
    ||||       |||||||  ||||||| ||||| |||||| |    ||||| g
    cuuu       agggacA  AUUCAUC UGACG CGUCCC c    uaucu a
uaau    ----aca       AC       C     -      - ----     u 


mirna_id: bfl-mir-281
hairpin:
cuauuucccucugu              cg         u   gaa c 
              gcggaggggagagc  uuccgugac gug   c u
              ||||||||||||||  ||||||||| |||   |  
              cgccUUUUCUCUCG  GAGGUACUG cac   g c
-------------g              UU         U   aag g 


mirna_id: bfl-mir-375
hairpin:
gccacau   -    c   ca   -      ug           u  gucu 
       ccc ugcc aga  ggc cgagcc  gcgagcaaagc gu    a
       ||| |||| |||  ||| ||||||  ||||||||||| ||    a
       ggg acgg UCU  UUG GCUCGG  UGCUUGUuuug ca    a
ugcuauc   u    u   -A   C      CU           -  auuc 


mirna_id: cte-mir-1
hairpin:
accg     c  u   g         c     acg     uuuc   ua 
    gcgug ga ugu acauacuuc uuaca   ccaua    cca  u
    ||||| || ||| ||||||||| |||||   |||||    |||   
    cguac cu acG UGUAUGAAG AAUGU   GGUau    ggu  u
-uca     c  u   A         A     -AA     ----   ua 


mirna_id: cte-mir-2a
hairpin:
-------------  a   ac           -   c      uucucuuccuccuc    a 
             gg gga  cgacaaagugg cug gaugug              cgau u
             || |||  ||||||||||| ||| ||||||              ||||  
             cc ucU  GUUGUUUCGCC GAC CUAUac              gcug g
cucucauaacgug  g   CA           C   A      -----------cac    c 


mirna_id: cte-mir-2b
hairpin:
--ucgug       ugu   --     u      augucauaguccccugu 
       accucug   ggc  gucaa guuggu                 g
       |||||||   |||  ||||| ||||||                 a
       uggagac   CCG  UAGUU CAACCG                 c
cucucua       uuu   AG     C      ACACUaucccggaugcg 


mirna_id: cte-mir-2c
hairpin:
u ug  uuu     u a     c        -      g   u    uuuu 
 g  uu   ggguu g ucggc uaucaagg uggcug gau uggg    u
 |  ||   ||||| | ||||| |||||||| |||||| ||| ||||     
 c  ga   uccag c aguuG AUAGUUUC ACCGAC CUA accc    a
g gu  -cu     u -     A        G      A   U    cguu 


mirna_id: cte-mir-7
hairpin:
--uaacccu    uu         -     CUA       U      -uau a 
         cugu  caugaugUG GAAGA   GUGAUUU AUUGUU    g a
         ||||  ||||||||| |||||   ||||||| ||||||    |  
         gaca  guacuacac cuucu   cacuaaa uaacaa    c a
aacauucau    -u         u     -ca       -      ccgu u 


mirna_id: cte-mir-8
hairpin:
gccagcc c        ug        -   c     c      -uu  c 
       g ggguugug  gacaucuu acc ggcgg auuaga   ga c
       | ||||||||  |||||||| ||| ||||| ||||||   || g
       c cucagcac  CUGUAGAA UGG CUGUC UAAUcu   cu g
--cugua -        cu        A   A     A      ucu  c 


mirna_id: cte-mir-9
hairpin:
--gcaugauaa    au    cU       U        G     uu  u 
           cccc  uuuu  CUUUGGU AUCUAGCU UAUGA  ua a
           ||||  ||||  ||||||| |||||||| |||||  || u
           gggg  aaaA  GAAACCA UGGAUCGA AUacu  au u
caucuaaaaca    ac    UC       U        A     uc  u 


mirna_id: cte-mir-10a
hairpin:
uuc   g   -        -uU      UA UUC         c   aaucu 
   agu cuc cucaaugu   ACCCUG  G   CGGAUUUGU uug     c
   ||| ||| ||||||||   ||||||  |   ||||||||| |||     a
   uca gag gaguugua   uggggc  c   gcuuaaaca aac     g
--u   -   u        cuu      uc uua         -   gaaac 


mirna_id: cte-mir-10b
hairpin:
uuau      c     ccU       U     C   C A   a aaa 
    ugguaa guugc   UACCCUG CGAAC GAG G GUG g   u
    |||||| |||||   ||||||| ||||| ||| | ||| |    
    aucguu caacg   augggac guuug cuc c cac c   u
--uu      -     aac       -     a   - c   - cau 


mirna_id: cte-mir-10c
hairpin:
uggagaugaaaguca     c    uG  C        CC A       uuga u 
               caaug ccau  AC CUGUAGAA  G GCUUGUG    c a
               ||||| ||||  || ||||||||  | |||||||    | a
               guuau ggua  ug gacaucuu  c cgaacac    g u
-----------aauc     u    ca  u        au -       uaaa u 


mirna_id: cte-mir-12
hairpin:
----ugga    g g u     cc        A  U    UA    gua aa 
        agug c g cagag  UGAGUAUU CA CAGG  CUGA   c  g
        |||| | | |||||  |||||||| || ||||  ||||   |   
        ucac g c gucuc  gcucauaa gu gucc  gacu   g  c
ucaacuaa    - a u     uc        a  c    gg    aaa ca 


mirna_id: cte-mir-29a
hairpin:
aa    -    u    uc        cuc      a    uuaa   uuu 
  uggg gcuc ggaa  cugguuuu   uggugc uaga    cgc   g
  |||| |||| ||||  ||||||||   |||||| ||||    |||   a
  acuc uggg ccuU  GACUAAAG   ACCACG AUcu    gug   a
-c    g    u    UU        UUU      -    ----   uuu 


mirna_id: cte-mir-29b
hairpin:
--    -   c  c  -     c   c      ga     -----u    uu 
  ggag gcu gg gc cuggu uca auggug  uagag      uggc  c
  |||| ||| || || ||||| ||| ||||||  |||||      ||||   
  ccuc cgg cu cG GACUA AGU UACCAC  AUuuc      accg  g
cu    u   u  u  U     A   U      -G     caaguu    cg 


mirna_id: cte-mir-31
hairpin:
--gcgaucuca    a    ccA     G    U    U        u  a 
           gggc caga   GGCAA AUGU GGCA AGCUgauu ac c
           |||| ||||   ||||| |||| |||| |||||||| || u
           cccg gucu   ccguu uacg cugu ucgacugg ug c
cuacaaucaga    g    ccc     a    -    c        -  u 


mirna_id: cte-mir-34
hairpin:
cagccacugc         g U       U      C       -ga   a 
          uuguguuuc c GGCAGUG GGUUAG UGGUUGU   auu a
          ||||||||| | ||||||| |||||| |||||||   |||  
          aacauaaag g ccgucau ucgauc accaaca   uag u
-cuguauuaa         g u       c      -       aca   a 


mirna_id: cte-mir-71
hairpin:
aga a   c    gag       -          G   UG  A  uacacu 
   c aua agag   cuccaUG AAAGACAUGG UAG  AG UG      g
   | ||| ||||   ||||||| |||||||||| |||  || ||      u
   g uau ucuc   gagguac uuucuguacu auc  uc ac      c
aua c   -    -aa       c          -   gu  c  uaaucu 


mirna_id: cte-mir-87a
hairpin:
------------------------      u     u    g   aacgauuaaagaaaaua 
                        ccugaa uuuug cuca cca                 g
                        |||||| ||||| |||| |||                 u
                        GGACUU GAAAC GAGU Ggu                 u
uuccgucacgucaggcguuCGUGU      U     -    -   cuagggaggcgccuccc 


mirna_id: cte-mir-87b
hairpin:
-gg    g au      ug ug        c      a   aa    -   u 
   agug a  gucgcg  g  gcgccuga acuuug cuc  accu cuu u
   |||| |  ||||||  |  |||||||| |||||| |||  |||| ||| c
   uuac u  cagcgc  c  UGUGGACU UGAAAC GAG  UGga gag g
cua    g --      gu UA        U      -   --    u   u 


mirna_id: cte-mir-92a
hairpin:
uuucgu   u  u  uc  u            a      c     g   ucg 
      gcg gu gc  gg gccagaaggucg gauugg gcaau cug   u
      ||| || ||  || |||||||||||| |||||| ||||| |||   c
      ugc cg cg  uc cgguCUUCCGGC CUGAUC CGUUA Gac   c
---uuc   u  u  --  u            C      A     -   cua 


mirna_id: cte-mir-92b
hairpin:
cgc  g c    -u   -     a     c   -        g   -    aa 
   au g gucg  uga aucgg ggguc gga uggugcaa uug uuaa  c
   || | ||||  ||| ||||| ||||| ||| |||||||| ||| ||||   
   ua c cggc  acu uaguC UCCGG CCU GUCACGUU Aac gguu  a
--a  g -    uc   c     G     C   U        A   u    ga 


mirna_id: cte-mir-92c
hairpin:
--auuauuac      -ga  g      u      cg     cc   ucu   u 
          gucagu   ag aggucg gacaag  gcaau  ugg   ggc g
          ||||||   || |||||| ||||||  |||||  |||   |||  
          caguca   UC UCCGGC CUGUUC  CGUUA  acc   ucg a
cugcacucuc      gac  G      C      -A     --   ---   u 


mirna_id: cte-mir-96
hairpin:
-ugc        u  CUU     UG C     U     ca  ga g 
    ggauggug ga   GGCAC  G GGAAU AUCAc  gu  c c
    |||||||| ||   |||||  | ||||| |||||  ||  |  
    ccuaccac cu   ccgug  c ccuug uagug  ua  g a
cccu        u  acu     gu c     -     -c  -a a 


mirna_id: cte-mir-100
hairpin:
aaugucu   --a       g A       C  C   A      uuu   g 
       gcc   aguagcg g ACCCGUA AA CGA CUUGUG   ucu c
       |||   ||||||| | ||||||| || ||| ||||||   ||| g
       cgg   ucguugc u ugggcau uu gcu gaacac   aga a
ggcucuc   gug       g g       u  c   c      --c   a 


mirna_id: cte-mir-125
hairpin:
uaac  c   -  au      cUC  UG   CC           ag    c 
    ca ucg gc  cucgca   CC  AGA  CUAACUUGUGA  cuuu u
    || ||| ||  ||||||   ||  |||  |||||||||||  ||||  
    gu agc cg  gagcgu   gg  ucu  gauugagcgcu  gaaa a
-gcc  u   u  ag      cuc  gu   aa           -a    a 


mirna_id: cte-mir-133
hairpin:
------ucgua      g               acu  gu     ugug   u 
           gcgcac ccguagcugguugaa   gg  caaau    cgc g
           |||||| |||||||||||||||   ||  |||||    ||| c
           cgcgug ggUGUCGACCAACUU   CC  GUUua    gcg u
aucgcucaccg      -               -CC  UG     cuug   u 


mirna_id: cte-mir-137
hairpin:
aa  a   c   -     gag    g       ug     a      a  a 
  ga gaa gcu agguu   uacg guauucu  gguaa uaauau cc a
  || ||| ||| |||||   |||| |||||||  ||||| |||||| || g
  cu uuu cga uccaa   AUGC CAUAAGA  UCGUU AUugua gg a
ag  a   -   a     acG    A       GU     -      -  a 


mirna_id: cte-mir-153
hairpin:
------a    ucuuacuc   a     ca         gu   -     -  gaau 
       gccu        gga uacga  gcuuuugug  uau caauu gu    u
       ||||        ||| |||||  |||||||||  ||| ||||| ||     
       cgga        ucu augCU  UGAAAACAC  AUA GUUaa ca    c
accacua    -------c   a     AG         UG   C     a  gagu 


mirna_id: cte-mir-182
hairpin:
----uaaa  --     c   ccc  C    C       GA            cu 
        gg  cgcuc caa   uu UUGG ACUGGUA  AUUCACUgaauu  u
        ||  ||||| |||   || |||| |||||||  ||||||||||||   
        cc  gugag guu   aa aacu ugaccau  uaagugacuuga  u
cggcguua  aa     u   ---  a    c       --            au 


mirna_id: cte-mir-184a
hairpin:
cauca    --a   -    au      c  u             ccgu   a 
     cucg   ucg cacg  uccuua ca uucuuuguccggu    gug u
     ||||   ||| ||||  |||||| || |||||||||||||    ||| u
     gagc   agc gugu  GGGAAU GU AAGAGGCAGGUca    uac a
--ucc    acc   a    cC      A  C             ---c   u 


mirna_id: cte-mir-184b
hairpin:
-uua    a  u    uuc        c  g       u  u  cug 
    ugau ca cacg   ccuuguca uu uucgucc gu gg   c
    |||| || ||||   |||||||| || ||||||| || ||   g
    acua gu gugu   GGGAUAGU AA AGGCAGG ca uc   u
gugc    g  -    ccC        C  G       U  c  uuu 


mirna_id: cte-mir-190
hairpin:
-accc  u   u  u   g   A              AUU      u  cuc 
     ac gcc cc cuc gca GAUAUGUUUGAUAU   UGGUGG gc   u
     || ||| || ||| ||| ||||||||||||||   |||||| ||    
     ug cgg gg gag ugu cuguacaaacuaua   accacc ug   u
ucaca  u   u  -   g   a              --g      -  aca 


mirna_id: cte-mir-193
hairpin:
uga        aagac    -u       au     cg   gu 
   cguggcau     gagg  cuugacg  ccagu  ggg  u
   ||||||||     ||||  |||||||  |||||  |||  u
   gcaccgua     CUCC  GAACUGC  GGUCA  ccu  g
ccg        --acC    CU       CC     Au   ga 


mirna_id: cte-mir-210a
hairpin:
------ac        c  -ug       -   u          aa  -ug  c 
        ggcgugug gu   gucauug cgc acgcacaaag  ga   cg u
        |||||||| ||   ||||||| ||| ||||||||||  ||   || g
        cugcacgc cg   CAGUGAC GUG UGCGUGUUUc  cu   gu c
cuucguca        a  UAA       A   -          -a  uua  u 


mirna_id: cte-mir-216a
hairpin:
uaa     UA          G      A   u  ugg 
   uuguc  AUCUCAGUUG UAAUUC GAg gc   a
   |||||  |||||||||| |||||| ||| ||    
   aacag  uagggucgac auuagg cuc ug   a
aua     gc          a      -   u  cuu 


mirna_id: cte-mir-252a
hairpin:
-augcuc     uugcca   C        AGU  C        uuccuu 
       gcuca      aug UAAGUACU   GC GCAGGAGg      g
       |||||      ||| ||||||||   || ||||||||       
       cgagu      uau auucguga   ug cguccucc      u
uccuuua     uuacac   a        gcu  u        ccaacu 


mirna_id: cte-mir-252b
hairpin:
----ugcauc    -    aca   C          U CC        uacg 
          ucac ugug   gug UAAGUAGUAG G  GCAGGUAa    u
          |||| ||||   ||| |||||||||| |  ||||||||    u
          agug gcac   cac auucgucguc c  cguccauu    a
uacaacaaua    c    gaa   a          u -a        uagu 


mirna_id: cte-mir-278
hairpin:
------------      ---        uu  uu u g     a   guc      u 
            ucgccc   acgagcga  gu  c c ugauc cgu   uuugua c
            ||||||   ||||||||  ||  | | ||||| |||   ||||||  
            ggcggg   UGCUUGCU  CA  G G GCUag gcg   aaacau a
uucaauuaggcg      gCU        UU  GG U -     -   gua      a 


mirna_id: cte-mir-279
hairpin:
----c   uc       c    a   gc        a    c   u   gau 
     guu  gcugucg cuug aug  uguggauc aguc aug uaa   u
     |||  ||||||| |||| |||  |||||||| |||| ||| |||   u
     cga  cggcggu ggaC UAC  ACACCUAG UCAG Uac guu   c
cuucc   -u       u    C   UC        A    -   u   aag 


mirna_id: cte-mir-281
hairpin:
acu    gauucaauc  - u       c         -  g     aaac    u 
   gcag         gg c ggucguu aggggggca cu caugg    gcua c
   ||||         || | ||||||| ||||||||| || |||||    ||||  
   cguu         cc g ccagcaA UUCUCUCGU GA GUACU    ugau c
--g    ------aau  a u       U         U  G     --GU    g 


mirna_id: cte-mir-315
hairpin:
uca   cc   -    -a   cU         UG  CA       -c    u 
   cuu  ggc gucc  cac  UUUGAUUGU  CU  GAAAGCC  uuug u
   |||  ||| ||||  |||  |||||||||  ||  |||||||  |||| u
   gag  ccg uagg  gug  gaacuaaca  ga  cuuucgg  gagc a
--c   ua   a    aa   uu         gu  -a       uu    u 


mirna_id: cte-mir-317
hairpin:
cggaaggaga  c   -     c   c       --    -  g   c     u  a 
          ag guc gagcg agg aagagau  cacu gc gug ucaca gu g
          || ||| ||||| ||| |||||||  |||| || ||| ||||| ||  
          uc cag cucgc ucu UUCUCUA  GUGG CG CAC AGUgu ca c
---------g  -   u     u   U       UG    U  A   A     -  c 


mirna_id: cte-mir-365
hairpin:
cuucu   ccca     u u           a              gaca 
     uca    ucaga a auucgggguuu aaaggguauuuuuu    u
     |||    ||||| | ||||||||||| ||||||||||||||    u
     agu    agucu u uGGGUCCUAAA UUUCCCGUAAGagg    c
-cuac   -ccg     c c           C              ucag 


mirna_id: cte-mir-375
hairpin:
cauuaccagua       u       a      aa   u       u  gu 
           gcaucgg uguuagc ugggcc  acg gcaagac gu  u
           ||||||| ||||||| ||||||  ||| ||||||| ||   
           cgugguu acaAUUG GCUCGG  UGC UGUUUug cg  u
----ucuauug       c       C      CC   U       u  ag 


mirna_id: cte-mir-745a
hairpin:
-gag   -  u             u     a    -u  a 
    gac ag acggcucuuuauc gguag cuug  gc a
    ||| || ||||||||||||| ||||| ||||  ||  
    cug uC UGUCGAGAAAUGG CCGUC GAac  cg a
aacg   c  -             U     -    cc  c 


mirna_id: cte-mir-745b
hairpin:
u g    uu   u    c c     cuaa    ucu 
 g ugug  gcc cuuc c uggca    uccc   g
 | ||||  ||| |||| | |||||    ||||    
 c acaU  CGG GAAG G ACCGU    AGgg   c
a a    GU   -    U A     --CG    uuc 


mirna_id: cte-mir-750
hairpin:
-------    -   c              -        ca     gg       
       ccag gug gaugaguuggagga uugggucu  gcauu  acgagc 
       |||| ||| |||||||||||||| ||||||||  |||||  ||||| g
       gguc cac cuACUCGACCUUCU AAUCUAGA  Cguga  uguuug 
uccucca    u   c              C        -C     gg       


mirna_id: cte-mir-981
hairpin:
aug         uu         -  gu uu      - -  ac 
   gucuuucaa  cggguuucg cg  a  cgaaca c gu  c
   |||||||||  ||||||||| ||  |  |||||| | ||  a
   uagaaaguU  GUCCAAAGC GC  U  GCUUgu g cg  a
uga         UC         U  UG -U      u a  au 


mirna_id: cte-mir-1175
hairpin:
-------ugcu     u    -    A     UU        g  cu 
           ugaga uAGU GGAG GAGUU  AUCUCAUc ag  u
           ||||| |||| |||| |||||  |||||||| ||   
           acucu GUCA CCUC CUCAA  UAGAGUgg uu  g
guuuaagucac     C    A    -     CU        g  ua 


mirna_id: cte-bantam
hairpin:
uca a  --aagacuu      c        u uu      uc    u   u 
   g gc         gcgaga ugguuuuc c  uggucu  caga uuu a
   | ||         |||||| |||||||| |  ||||||  |||| ||| u
   c cg         cgcuCU AUCAAAAG G  ACUAGA  GUcu aag u
-ga -  cauuacagu      A        U UU      --    u   g 


mirna_id: cte-let-7
hairpin:
cccccug   -    u    uU   G   U            aga   acauc 
       gcu uacc ccag  GAG UAG AGGUUGUAUAGU   guu     a
       ||| |||| ||||  ||| ||| ||||||||||||   |||     c
       cga augg gguc  uuc auc uccgacauguca   cag     u
---guca   c    -    cu   g   u            -ag   acaaa 


mirna_id: cte-mir-33
hairpin:
--------   aua    uug         -         UU         -  aag 
        gga   cgcu   cacauugGU GCAUUGUAG  GCAUUGCAu gg   u
        |||   ||||   ||||||||| |||||||||  ||||||||| ||    
        ccu   gcgg   guguaacua cgugacguc  cgugacgug cc   u
accaucau   ---    --a         a         cu         g  aac 


mirna_id: cte-mir-124
hairpin:
gac uu  uc     -a u             g     gu       -  ga 
   g  gu  uggcg  c ucuuggcguucac gcgug  ccuuggu gu  c
   |  ||  |||||  | ||||||||||||| |||||  ||||||| ||  u
   c  cg  gccgc  g agaACCGUAAGUG CGCAC  GGAAUua ca  a
--c uc  uc     ca c             G     --       a  ac 


mirna_id: cte-mir-219
hairpin:
-----cagaca     -    c      U    A      A      uucacu 
           gucuu uuag auUGAU GUCC AACGCA UUCUug      u
           ||||| |||| |||||| |||| |||||| ||||||       
           cggaa gauc uaacua cagg uugugu aagaac      c
ccaacacauga     c    c      -    c      c      cucuug 


mirna_id: lgi-mir-1
hairpin:
guau           ca         c    u  c     uuuua 
    cuguaugcaga  acauacuuc uugc au ccaua     u
    |||||||||||  ||||||||| |||| || |||||     a
    gguauguguuu  UGUAUGAAG AAUG UA GGUau     u
uuuu           UA         A    -  A     cguaa 


mirna_id: lgi-mir-2c
hairpin:
acauuaccggua          u c        -             uuaa 
            uuuauggaga c cauuaaag ugguugugaugug    a
            |||||||||| | |||||||| |||||||||||||     
            aaauauuucu G GUAGUUUC ACCGACACUAUac    u
----acuaaaac          U A        G             uacu 


mirna_id: lgi-mir-2d
hairpin:
uaucugaaa      u u c   cu    -      -     a      -   a 
         guauuu g c cug  cuga ccaagu ggcug gauaag uuu u
         |||||| | | |||  |||| |||||| ||||| |||||| |||  
         uauaaa c g gac  GACU GGUUCG CCGAC CUAUuc aag u
-----caaa      - u u   uU    A      U     A      u   u 


mirna_id: lgi-mir-7
hairpin:
auaaccu   u   c        -    CUA       U     Uu    uu 
       auc acc uggucUGG AAGA   GUGAUUU GUUGU  uaau  c
       ||| ||| |||||||| ||||   ||||||| |||||  ||||   
       uag ugg guuagacc uucu   cacuaaa uaaca  auua  a
acaauuc   u   u        c    -ua       -     --    ug 


mirna_id: lgi-mir-8
hairpin:
gagagaa       cug   -c      -    u    c      -uu   a 
       acgaauu   gug  caucuu acuu acag auuaga   ugu c
       |||||||   |||  |||||| |||| |||| ||||||   |||  
       ugcuuga   cac  GUAGAA UGGA UGUC UAAUcu   aca g
----aag       -aa   CU      A    C    A      uuu   a 


mirna_id: lgi-mir-9
hairpin:
--a    aaag u                 U        G      ugaaa 
   agug    c cuguuuuugUCUUUGGU AUCUAGCU UAUGAu     u
   ||||    | ||||||||||||||||| |||||||| ||||||      
   ucau    g gguaaaaacggaaacca uggaucga auauua     a
auc    auca u                 u        a      caaag 


mirna_id: lgi-mir-10
hairpin:
gaaua   --u     --    u      U     UC          u  ga 
     uug   gccuu  uacg uUACCC GUAGA  CGAAUUUGUg au  a
     |||   |||||  |||| |||||| |||||  |||||||||| ||   
     aac   uggag  gugu aguggg cguuu  gcuuaaacau ua  a
acuaa   uuu     cu    u      -     uu          c  ac 


mirna_id: lgi-mir-12
hairpin:
-----ugaccau   a    ug cgU      U   UC         ---  a 
            gac ucau  c   GAGUAU ACA  AGGUACUGA   gg a
            ||| ||||  |   |||||| |||  |||||||||   || u
            cug agua  g   cuuaua ugu  uccaugacu   uc g
ccacgacccuuu   c    gu aau      c   cu         ggc  u 


mirna_id: lgi-mir-29
hairpin:
uucagaua   ua     ac    -u   c         a   a    uuca 
        ugu  ccauu  gggg  cug uuucaaaug ugu uaga    u
        |||  |||||  ||||  ||| ||||||||| ||| ||||    a
        aca  gguag  cucU  GAC AAAGUUUAC ACG AUcu    a
---caacc   -c     aa    UU   U         C   -    ccuu 


mirna_id: lgi-mir-31
hairpin:
aua    ----u          cuA     G   UU           ---g   u 
   augu     ugaguccaga   GGCAA AUG  GGCAUAGCUga    uca a
   ||||     ||||||||||   ||||| |||  |||||||||||    |||  
   uacg     guucggguuu   ucguu uac  cugugucgacu    agu u
---    uuguu          cua     a   -u           acca   a 


mirna_id: lgi-mir-33
hairpin:
----c  acuaag           -G          U          uuguu 
     ga      caguugugaug  UGCAUUGUAG UGCAUUGCAU     a
     ||      |||||||||||  |||||||||| ||||||||||      
     cu      guuagcauuAC  ACGUGACGUC ACGUAACGua     u
aucca  aucaaa           AA          U          uuaaa 


mirna_id: lgi-mir-34
hairpin:
----aa  gag  g    gg   u U          U   C    A   caug 
      ca   ug gugu  uuc g GGCAGUGUGG UAG UGGU GUu    a
      ||   || ||||  ||| | |||||||||| ||| |||| |||     
      gu   ac cgca  aag c ccguuacauc auc acca caa    u
cagcaa  aaa  a    -a   c -          u   -    a   aauu 


mirna_id: lgi-mir-67
hairpin:
ucu  g     cu      c  -          uccuc 
   gu ugucc  guucau gu gguugugaug     u
   || |||||  |||||| || ||||||||||      
   cg aCAGG  UAAGUA CG CCAACACUac     u
gcu  g     AG      -  U          uaagu 


mirna_id: lgi-mir-71
hairpin:
--accaugcag         u  UG       A             auuca 
           cagaaaucu ug  AAAGACA GGGUAGUGAGAUG     a
           ||||||||| ||  ||||||| |||||||||||||      
           guuuuuaga ac  uuucugu cucaucauucuac     u
aacuacuauag         u  gu       -             cauaa 


mirna_id: lgi-mir-79
hairpin:
ga    aaag u                 u        g      ugaaa 
  agug    c cuguuuuugucuuuggu aucuagcu uaugau     u
  ||||    | ||||||||||||||||| |||||||| ||||||      
  ucau    g gguaaaaaCGGAAACCA UGGAUCGA AUAuua     a
-c    auca u                 U        A      caaag 


mirna_id: lgi-mir-87
hairpin:
uuaauaacuug       u    g ug           a    aa    aau 
           agguuug cuga g  ccugaaauuuu gcuc  accu   a
           ||||||| |||| |  ||||||||||| ||||  ||||   a
           uucaagu gacU U  GGACUUUGAAA CGAG  UGga   u
---ucuauaua       c    A GU           -    --    aga 


mirna_id: lgi-mir-92
hairpin:
-cauaa      aaga ga  u        u    uu      a   agaa 
      ugaaga    u  gu gcaggucg gaua  ugcaau ugg    g
      ||||||    |  || |||||||| ||||  |||||| |||     
      acuucu    a  cg CGUCCGGC CUGU  ACGUUA acu    a
aacucc      ---g aa  u        C    UC      A   aaua 


mirna_id: lgi-mir-96a
hairpin:
ugc    aC       UG C G         g      
   uccu  UUGGCAC  G G AAUAAUCAc ugaua 
   ||||  |||||||  | | ||||||||| |||| a
   agga  aacugug  c c uuguuagug acuaa 
uuu    aa       gu - a         -      


mirna_id: lgi-mir-96b
hairpin:
caa            U   GA      Gguaua 
   uuAUUUGGCACU GUG  AUAAUC      a
   |||||||||||| |||  ||||||       
   aauaaaccgugg cac  uauuag      a
gcc            c   -a      aacaau 


mirna_id: lgi-mir-100
hairpin:
---au   --uga            -A    G    UC   A      a  a 
     uag     cuaguuaauaua  ACCC UAGA  CGA CUUGUG ua a
     |||     ||||||||||||  |||| ||||  ||| |||||| || a
     auc     gaucgguuauau  uggg aucu  guu gaacgc gu u
uagac   uaugg            cc    g    uu   c      a  c 


mirna_id: lgi-mir-124
hairpin:
aauccaaaa     g       a            aaa        -  aa 
         uggcg aucuguu guguucacugug   gccuuggu gu  u
         ||||| ||||||| ||||||||||||   |||||||| ||  u
         acugc uggauaA CGUAAGUGGCGC   CGGAAUua ca  a
ucuucuaua     -       C            --A        u  aa 


mirna_id: lgi-mir-133
hairpin:
ugu               AUU         --ua  aa 
   cuguAGCUGGUUGAA   GGGCCAAAU    ga  a
   |||||||||||||||   |||||||||    ||   
   gaUGUCGACCAACUU   CCUGGUUua    cu  a
guu               -CC         cgaa  gg 


mirna_id: lgi-mir-137
hairpin:
uuugacua     -u   c  c    a       ug   g        uau 
        gagcc  ggc ga uacg guauucu  ggu aauaauac   a
        |||||  ||| || |||| |||||||  ||| ||||||||   u
        uuugg  ccg uu AUGC CAUAAGA  UCG UUAUugug   a
-cggcacc     uu   -  A    A       GU   -        cga 


mirna_id: lgi-mir-153
hairpin:
-   cucuaac             gca            ua      - ug   
 ggg       uucauuuucccgg   gcuuuugugauu  gcaauu g  ac 
 |||       |||||||||||||   ||||||||||||  |||||| |  | u
 ccu       agguggaggggCU   UGAAAACACUGA  CGUUaa c  uu 
a   ---aaca             -AG            UA      a gu   


mirna_id: lgi-mir-182
hairpin:
---------    aau     aa    cuC    C      A    U     cuaaa 
         auug   ugcug  acug   UUGG ACUGGU GAAU CACUG     a
         ||||   |||||  ||||   |||| |||||| |||| |||||     a
         uaac   acgau  uggc   aacc uggcca cuua gugac     a
gaaacuaca    ---     --    uca    u      -    -     cucau 


mirna_id: lgi-mir-183
hairpin:
---cguaaa    u cg      A          U   AU      ug  aa 
         ccgg c  acagug AUGGCACUGG AGA  UCACGG  ua  c
         |||| |  |||||| |||||||||| |||  ||||||  ||  c
         ggcu g  uguuac uacuguggcc ucu  ggugcc  gu  u
ucgacugaa    - au      a          u   --      uu  gu 


mirna_id: lgi-mir-184
hairpin:
gccaauuuaau     --     uu         c  g       -cg   aa 
           aucuu  ucacg  uccuuguca uu uucgucu   ucu  u
           |||||  |||||  ||||||||| || |||||||   |||  a
           uagag  ggugu  GGGAAUAGU AA AGGCAGG   aga  u
-----cgacuu     ug     uC         C  G       Uca   aa 


mirna_id: lgi-mir-190
hairpin:
     uuu  u         -uA           UA          uuaaug 
aagag   gc gaucucugu   GAUAUGUUUGA  UACUUGGUgg      g
|||||   || |||||||||   |||||||||||  ||||||||||      u
uuuuc   ug cuggagaca   cuguacaaacu  augaaccacc      u
     ---  u         uca           --          ugaaaa 


mirna_id: lgi-mir-193
hairpin:
aug     g      cug          uu   ua    uac  a 
   aacuu uucuca   gggauuuugu  guc  uaug   ug u
   ||||| ||||||   ||||||||||  |||  ||||   ||  
   uugag aggggu   CCCUAAAACG  CGG  AUac   ac a
-aa     -      CAA          UC   UC    --u  a 


mirna_id: lgi-mir-216a
hairpin:
ucu                  A  U       C    uucu   aaa 
   ugauguuugugUAAUCUC GC GGUAAUU UGAG    aau   u
   |||||||||||||||||| || ||||||| ||||    |||    
   auuauaaauauauuagag cg ucauuga acuc    uua   a
ugc                  c  u       -    --uu   auc 


mirna_id: lgi-mir-216b
hairpin:
ucug          UG U         uuac 
    UAAUAUCAGC  G AAUCCUGAG    u
    ||||||||||  | |||||||||    g
    auuauaguug  u uuaggacuc    a
acaa          gu -         uauu 


mirna_id: lgi-mir-242a
hairpin:
gac  g          -U   G    C UU         uaa 
   ag aauaagguuu  UGC UAGG G  GUGCACAGu   a
   || ||||||||||  ||| |||| |  |||||||||   u
   uc uuauuuuaaa  acg aucc c  uauguguua   a
aga  a          cu   a    c cu         uag 


mirna_id: lgi-mir-252a
hairpin:
---aacaaa     aaguaa   C       U  U C        --    u 
         gaucg      aua UAAGUAC GG G CGCGGGAg  guua a
         |||||      ||| ||||||| || | ||||||||  ||||  
         cuagc      uau auucgug uc c gcguccuc  uagu a
cuacaauaa     gaacug   c       u  u a        au    u 


mirna_id: lgi-mir-278
hairpin:
gaaacuauac     uau  u  cu     g     u uu    a   guaa 
          agcuu   gu ac  gcgag gaagg u  cgcc auc    a
          |||||   || ||  ||||| ||||| |  |||| |||     
          ucgga   cg ug  UGCUU CUUUC A  GUGG Uag    c
-ugcaaagca     --u  -  UC     G     - GG    C   aaau 


mirna_id: lgi-mir-279
hairpin:
ggca  gg  aa   -auaaa       u    ag      g    --u  a 
    ga  uu  ccg      uggguga ugug  ucuggu caug   uc u
    ||  ||  |||      ||||||| ||||  |||||| ||||   || g
    cu  aa  ggc      ACCUACU ACAC  AGAUCA GUac   ag a
--ua  aa  ag   gaagac       C    CU      -    ugc  u 


mirna_id: lgi-mir-281
hairpin:
uuucaagauucaa      -a  a           --     C      u gaa 
             gaucaa  cg ugAAGGGAGCA  UCUGU GACAGU u   u
             ||||||  || |||||||||||  ||||| |||||| |    
             cugguu  gc AUUUCUCUCGU  AGGUA CUGUca a   u
-----cacuuaaa      gg  c           UG     -      u aau 


mirna_id: lgi-mir-315
hairpin:
-auuaa   u      -   aaUU             A  AA    uaaug 
      cau aucuuc uca    UUGAUUGUUGCUC GA  GCCg     u
      ||| |||||| |||    ||||||||||||| ||  ||||     u
      gua uggagg agu    aacuaacaacggg cu  cggc     u
acugaa   -      u   aauc             -  cg    cucaa 


mirna_id: lgi-mir-317
hairpin:
aaga    aua        -              --             uuuu 
    gaag   acucuguu guggaggauaccau  guuguguuuacag    g
    ||||   |||||||| ||||||||||||||  |||||||||||||    a
    cuuu   ugagacga uaUCUUCUAUGGUG  CGACACAAGUguu    a
---a    --a        a              GU             uaca 


mirna_id: lgi-mir-745a
hairpin:
-uau    c    u        a    auca 
    cggc cuuc ucagguag cuug    u
    |||| |||| |||||||| ||||    u
    GUCG GAAG AGUCCGUC GAac    u
acaU    A    U        -    aaac 


mirna_id: lgi-mir-745b
hairpin:
aua    c   u            g  u     a  guaau 
   gacu auc uagcucuucauu gg cagcu uc     u
   |||| ||| |||||||||||| || ||||| ||      
   uugg uaG GUCGGGAAGUAA CC GUCGA ag     u
aaa    u   U            A  -     g  aaaga 


mirna_id: lgi-mir-750
hairpin:
--gguaau   u        uc         -  c  cc      uu    c 
        aca guuucagu  guuggaaga uu ga  uugaca  guuc a
        ||| ||||||||  ||||||||| || ||  ||||||  ||||  
        ugu uagaguuA  CGACCUUCU AA CU  GACugu  uaag u
caaaaauu   u        CU         C  U  -A      -u    a 


mirna_id: lgi-mir-981
hairpin:
--uuuga         -    uu       --   u 
       cggguuucg cgau  gcgaaca  guc a
       ||||||||| ||||  |||||||  ||| a
       GUCCAAAGC GCUG  UGCUUgu  uag c
gaauUCC         A    -U       gu   g 


mirna_id: lgi-mir-1175
hairpin:
-------uguucaa      -    A     UU         cucaa 
              uguAGU GGAG GAGUU  AUCUCAUcu     a
              |||||| |||| |||||  |||||||||      
              aCGUCA CCUC CUCAA  UAGAGUaga     c
uuuguccacuuuga      A    -     CU         caaaa 


mirna_id: lgi-let-7
hairpin:
aaucu       a     auU   G   U             gagaauua a  ua 
     uuuguga uucgg   GAG UAG AGGUUGUAUAGUU        c cc  g
     ||||||| |||||   ||| ||| |||||||||||||        | ||   
     aaacacu gaguc   uuc auc uccaacaugucaa        g gg  a
----c       -     ccu   g   u             -------- c  uc 


mirna_id: nve-mir-100
hairpin:
uaa   - a    auc  C       UC   A       ag 
   ucg c cagu   GA CCGUAGA  CGA CUUGUGg  u
   ||| | ||||   || |||||||  ||| |||||||  u
   agc g guca   CU GGCAUCU  GCU GGACAcc  u
uaa   u c    aaA  A       UU   C       ac 


mirna_id: sko-mir-1
hairpin:
gagg     -uuu    a         U     A        cuuau 
    ucucg    acag ACGUACUUC UUAUA UUCCAUAc     u
    |||||    |||| ||||||||| ||||| ||||||||     c
    agggc    uguU UGUAUGAAG AAUGU AAGGUaug     c
-aaa     ugau    A         U     -        ucuac 


mirna_id: sko-mir-7
hairpin:
gugu  c        -   A     A        G     gucac 
    ca auaccaua UGG AGACU GUGAUUUU UUGUu     u
    || |||||||| ||| ||||| |||||||| |||||      
    gu ugugguaU ACC UCUGA CACUAAAA Aacaa     g
----  u        U   G     -        -     accuu 


mirna_id: sko-mir-200
hairpin:
gaugc    -    u  a         -     c     c      -cu  u 
     gaug ugaa uc auugacauc uuacc gacag auuaga   ug u
     |||| |||| || ||||||||| ||||| ||||| ||||||   || a
     cuac acuu ag uaaUUGUAG AAUGG CUGUC UAAUcu   ac u
---cu    c    u  a         U     U     A      cuu  g 


mirna_id: sko-mir-9
hairpin:
c   c     -c        U        G     g   a 
 ucu guuuu  UCUUUGGU AUCUAGCU UAUga ugu c
 ||| |||||  |||||||| |||||||| ||||| ||| a
 aga caaaa  agaaacca uggaucga auauu aca u
-   -     ac        u        a     -   g 


mirna_id: sko-mir-10
hairpin:
---auaua    -  c a    -c    CU     UC           uacg 
        ucuc ca c accu  UACC  GUAGA  CGAAUUUGUGg    u
        |||| || | ||||  ||||  |||||  |||||||||||    a
        ggag gu g ugga  gugg  caucu  gcuuaagcacu    c
acaacaca    c  c a    ca    -c     uu           uuua 


mirna_id: sko-mir-29a
hairpin:
agaaugu      a           gc     u      a     uacac 
       uguuau augggagacug  uuuau uggugc uggag     u
       |||||| |||||||||||  ||||| |||||| |||||      
       acagug uaccuUUUGAC  AAGUA ACCACG AUcuc     u
-----uu      a           UA     U      -     cuacu 


mirna_id: sko-mir-29b
hairpin:
ugaac   c   c  u      -           C    GA      ccau 
     ucu uga cu aggaaC CUGAUUUCAAA GGUG  UAGAuu    a
     ||| ||| || |||||| ||||||||||| ||||  ||||||     
     aga acu ga uccuUG GACUAAAGUUU CCAC  AUcuga    g
----a   -   u  -      U           A    -G      caac 


mirna_id: sko-mir-31
hairpin:
--aaaauuc      uu  -u  A     G   UU          ---u   g 
         gcaaau  ag  gg GGCAA AUG  GGCAUAGCUG    uuc a
         ||||||  ||  || ||||| |||  ||||||||||    |||  
         uguuug  uc  uc ccguu uac  cugugucgac    aag u
cacugccac      uu  uu  -     a   uc          ugac   u 


mirna_id: sko-mir-33
hairpin:
--  acau  -c   u       -g          uu        ---      
  gg    ug  uug cucugug  ugcauuguag  gcauugca   uguac 
  ||    ||  ||| |||||||  ||||||||||  ||||||||   |||| g
  cc    ac  gac gagacAC  ACGUGACGUC  CGUGACgu   acaua 
ua  acuu  ca   c       AA          UU        cuc      


mirna_id: sko-mir-34
hairpin:
--gacuuacua    c   a    -     U        C      uuaau 
           uaug cac gugU GGCAG GUGGUUAG UGGUUG     u
           |||| ||| |||| ||||| |||||||| ||||||     a
           auac gug cAUA CCGUC UACUAGUC ACCAac     u
ccuacuaacca    a   a    U     -        U      uuuaa 


mirna_id: sko-mir-71
hairpin:
gcauuac     -      u  -U  A    AC            a  gua 
       uggug gguguu ug  GA AGAC  AGGUAGUGAGAU gu   u
       ||||| |||||| ||  || ||||  |||||||||||| ||   g
       accgu ccacga ac  cu ucug  uucaucgcucua ca   g
-ucuaaa     u      u  cu  c    gu            -  aau 


mirna_id: sko-mir-79
hairpin:
ccga   u     -   c     -c        u        g     g   a 
    auu uuggc ucu guuuu  ucuuuggu aucuagcu uauga ugu c
    ||| ||||| ||| |||||  |||||||| |||||||| ||||| ||| a
    uag gaccg aga caaaa  AGAAACCA UGGAUCGA AUAuu aca u
----   u     u   -     AC        U        A     -   g 


mirna_id: sko-mir-92a
hairpin:
c     aca  u   gg      c     a a     aa       -  ga 
 ucaua   ug cug  gacgcu aggcc g auaag  caauguu gu  u
 |||||   || |||  |||||| ||||| | |||||  ||||||| ||  g
 gguau   ac gac  uugugA UCCGG C UGUUC  GUUAUaa ca  a
c     --c  u   -a      A     C C     AC       a  ac 


mirna_id: sko-mir-92b
hairpin:
agcuuuuuucuuu   cg    gua    ua    uuu          uuc 
             acc  agcu   aggu  ggac   ugcaauguug   u
             |||  ||||   ||||  ||||   ||||||||||    
             ugg  ucgg   UCCG  CCUG   ACGUUAUaau   c
---caacauguau   aa    uCG    GC    UUC          cug 


mirna_id: sko-mir-92c
hairpin:
accauggauac       -c    g    ua    uuu         uugau 
           ugguugg  caug aggu  ggac   ugcaauauu     a
           |||||||  |||| ||||  ||||   |||||||||      
           aucaacu  guaU UCCG  CCUG   ACGUUAUaa     u
----acauuca       uu    G    GC    CUC         uuuau 


mirna_id: sko-mir-96
hairpin:
----------------------   u    G        -CA        ucuu 
                      ccu UUUG CACUAGCA   UUUUGCug    u
                      ||| |||| ||||||||   ||||||||    u
                      gga GAAC GUGAUCGU   AAAGCgac    u
ggccuacuuuccagcuacugca   C    G        AUG        uaua 


mirna_id: sko-mir-100
hairpin:
--acaac  -    -   u     A     U    C   A      -uua a 
       ug gcug gac gugua ACCCG AGAU CGA CUUGUG    g g
       || |||| ||| ||||| ||||| |||| ||| ||||||    |  
       ac cggu cug cguau ugggu ucua gcu gaacgc    c u
cuagcga  a    u   c     c     c    c   c      ucgg u 


mirna_id: sko-mir-124
hairpin:
ggauggu      -c      aA        A   GU       guucca 
       uauguc  uguucu  GUGUUCAC GCG  CCUUGAU      c
       ||||||  ||||||  |||||||| |||  |||||||      a
       auauag  acaagA  CGUAAGUG CGC  GGAAUua      c
-uaaaau      aa      AC        G   AC       acgcaa 


mirna_id: sko-mir-125a
hairpin:
--cu    au              CC     A  -            aauua 
    cuau  guguauuaccuaaU  CUGAG CC CUAACUUGUGAg     c
    ||||  ||||||||||||||  ||||| || ||||||||||||      
    gaua  uacgugguggguua  gauuc gg gauuggacacuu     c
caac    cu              -a     -  u            acgac 


mirna_id: sko-mir-133
hairpin:
ugcaa     a   g      a       aaauc  a        a   u 
     uugag ugu gugcug agcuggu     gg accaaauc uau a
     ||||| ||| |||||| |||||||     || |||||||| ||| c
     aacuu acg uacgaU UCGACCA     CC UGGUUuag gua a
aacca     -   g      G       ACUUC  C        -   a 


mirna_id: sko-mir-137
hairpin:
aagggaauca   -ac ug     g   c            u       -  u 
          ugc   g  ccggu acg guauucucgggu gauaaua ca a
          |||   |  ||||| ||| |||||||||||| ||||||| ||  
          acg   c  ggucG UGC CAUAAGAGUUCG UUAUugu gu c
----acgaca   auc gu     A   A            -       a  c 


mirna_id: sko-mir-153
hairpin:
uacuaaccuu  -  g -gg                ca        c  ucaa 
          gc ca u   ccuagucauuuuugug  uaugcaag ug    a
          || || |   ||||||||||||||||  |||||||| ||     
          cg gu a   gggUUAGUGAAAACAC  AUACGUUc ac    u
----cucacg  u  g aca                UG        -  uaac 


mirna_id: sko-mir-182
hairpin:
-uu       U       U  A      UCA     ugua 
   cguugug UUGGCAA AG UAGAAU   CAcug    c
   ||||||| ||||||| || ||||||   |||||    a
   gcgacau aaccguu uc gucuug   gugac    c
ugu       c       u  -      ---     uagu 


mirna_id: sko-mir-183
hairpin:
  c              UAU          cacucu 
cg ugugAAUGGCACUG   GAAUUCACUG      g
|| ||||||||||||||   ||||||||||      a
gc acauuuaccgugac   uuuaggugac      u
  a              -cu          cuucgc 


mirna_id: sko-mir-184
hairpin:
uagaa   -gac  uuu  u   cu        -   C G        --  ga 
     gau    gu   cc caa  CCUUAUCA UUC C CGUCCAGc  cc  c
     |||    ||   || |||  |||||||| ||| | ||||||||  ||   
     cua    ca   gg guu  GGAAUAGU AAG G GCAGGUcg  gg  a
----a   auca  uuu  u   CG        C   A -        aa  gu 


mirna_id: sko-mir-190
hairpin:
---a     aua    ucg     -UG         UUAU        --   u 
    aguuu   ccau   ccaug   AUAUGUUUG    UUGGUUGG  Ugg u
    |||||   ||||   |||||   |||||||||    ||||||||  ||| u
    ucaaa   ggug   gguac   uauacagac    gaccaacu  acc c
cuac     ---    uga     cua         -uau        aa   a 


mirna_id: sko-mir-193a
hairpin:
auu   a          UU AU       ag g 
   guu CGGGAUUUGA  G  CAGUUCa  u u
   ||| ||||||||||  |  |||||||  | u
   uaA GCCCUGAAUU  C  GUCAAgu  g u
uug   C          UU CG       cu u 


mirna_id: sko-mir-210
hairpin:
ugucacuauc     cg   a         C GA    U        -  uu 
          caggc  gga gggAGUUGC G  GCAU GCACAACA au  u
          |||||  ||| ||||||||| |  |||| |||||||| ||   
          guccg  ccu cCUUCAGCG C  CGUG CGUGUUgu ug  u
-cauuucaua     --   g         A AG    -        a  ua 


mirna_id: sko-mir-242
hairpin:
--c  -acc     c      gu     A  C UU        U  cg     
   ga    ucacu uaaugu  UGCGU GG G  GUGCACAG Ga  uauu 
   ||    ||||| ||||||  ||||| || |  |||||||| ||  ||| a
   cu    aguga guugcg  acgca cc c  uacguguc cu  auac 
cua  guaa     a      au     c  u uu        -  ua     


mirna_id: sko-mir-252a
hairpin:
c    ---c    ug    a  aC       U     C     A  cg aua 
 auga    uggc  aucc au  UAAGUAC AGUGC GCAGG GU  u   u
 ||||    ||||  |||| ||  ||||||| ||||| ||||| ||  |    
 uacu    accg  uagg ua  auucgug ucaug ugucc ca  g   u
-    uaua    ug    a  ca       u     c     -  au agu 


mirna_id: sko-mir-252b
hairpin:
-----uaca      cu  u     C          U CC        uuaaa 
         uugguu  ua ccuug UAAGUAGUAG G  GCAGGUAA     a
         ||||||  || ||||| |||||||||| |  ||||||||     u
         aaccaa  au ggaac auucgucauc c  cguccauu     a
gcuacuaaa      -u  -     a          u -u        uacua 


mirna_id: sko-mir-278
hairpin:
acugucuaa     ga      g              u ua   g    a 
         cgucu  uccgaa gaaugaaagucucg c  auc ugau u
         |||||  |||||| |||||||||||||| |  ||| ||||  
         gcaga  aggUUU CUUGCUUUCAGGGU G  Uag gcua u
cacuauaca     ga      G              - GC   a    a 


mirna_id: sko-mir-281
hairpin:
ag    a u   -      u  cg         u g   gc     ua  gc 
  gugg g gcu ccuugu gg  aggggagca c cca  gacgg  ug  a
  |||| | ||| |||||| ||  ||||||||| | |||  |||||  ||   
  cauu c cga ggaacg cu  UUCUCUCGU G GGU  CUGUc  au  c
-a    a -   u      -  AA         U A   -A     gc  aa 


mirna_id: sko-mir-315
hairpin:
-ucacauu      gg   -cg               A       uuau  u 
        gacucu  cgc   UUUUGAUUGUUGCUC GAAAGcc    gc u
        ||||||  |||   ||||||||||||||| |||||||    || c
        uugaga  gcg   aaaauuaacaauggg cuuucgg    ug u
cucuacuu      ga   aua               -       ---c  g 


mirna_id: sko-mir-365
hairpin:
uau  g      g c       C      A A     C    u 
   gc uuugug a uUGGGGU UCAGAG G GCAUU UGug a
   || |||||| | ||||||| |||||| | ||||| |||| u
   cg gaacau u AAUCCUA AGUUUC C CGUAA acau u
acu  g      g A       A      - -     U    u 


mirna_id: sko-let-7
hairpin:
guug  g       u     U   G                  agag   ua 
    uu ccuacuc cuggg GAG UAGUAGGUUGUAUAGUUg    cua  c
    || ||||||| ||||| ||| ||||||||||||||||||    |||   
    aa ggguggg gaccc uuc aucguucaacaugucaau    ggu  c
----  g       -     u   a                  agag   ua 


mirna_id: spu-mir-137
hairpin:
aug     ag            g       -   aa 
   auuac  guauucucgagu aauaaua cag  a
   |||||  |||||||||||| ||||||| |||   
   uGAUG  CAUAAGAGUUCG UUAUugu guc  a
aua     CA            -       a   cg 


mirna_id: spu-mir-210
hairpin:
cuc             a    g        -----  -  a 
   guuaguugcuguc cgcg cacaagag     ag ca u
   ||||||||||||| |||| ||||||||     || ||  
   uAGUCAGCGACAG GUGC GUGUUcuc     uc gu c
aca             C    -        acaua  u  a 


mirna_id: spu-mir-242
hairpin:
--uguaac    -     ggca      A GC UU         -  ucuu 
        acca ugucg    UUGCGU G  G  GUGCACAGU gu    u
        |||| |||||    |||||| |  |  ||||||||| ||     
        uggu acggc    aaugca c  c  uacguguua ca    a
cuaaucac    c     acua      c ua uc         a  uuaa 


mirna_id: spu-mir-375
hairpin:
------------------------      c    u       ---u  -  auaa        g 
                        cgagcu aacg gcaaaac    ug ag    ggucagcu u
                        |||||| |||| |||||||    || ||    ||||||||  
                        GCUCGG UUGC UGUUuug    ac uc    ccggucgg u
ccuaucacacugacguuaAACUGC      C    U       ucgu  a  ---g        c 


mirna_id: spu-let-7
hairpin:
guaca          uuacgU   G         A       -------ug   a 
     ugaauggucc      GAG UAGUAGGUU UAUAGUU         gag u
     ||||||||||      ||| ||||||||| |||||||         ||| a
     acuuaccggg      uuc aucguccga auaucga         cuc c
----c          -uuccu   g         c       uagcgguaa   a 


mirna_id: spu-mir-1
hairpin:
ccaua     -ugc  ua             ga        ---c   au 
     uccca    ca  acauacuucuuua  auuccaua    uga  c
     |||||    ||  |||||||||||||  ||||||||    |||   
     agggu    gu  UGUAUGAAGAAAU  UAAGGUau    acu  u
-cucc     caaa  UA             -G        cuca   cc 


mirna_id: spu-mir-7
hairpin:
cau       g    -u   AA   U         G     -  gaaug 
   accucug cccu  UGG  GAC AGUGAUUUU UUGUu gu     u
   ||||||| ||||  |||  ||| ||||||||| ||||| ||      
   uggagac gggg  acc  cug ucacuaaaa aacaa ca     c
acc       a    uc   gg   -         -     u  agaaa 


mirna_id: spu-mir-200
hairpin:
-----u    ---       -  UG     C      -cg      
      ggug   aCAUCAU AC  GACAG AUUGGA   ugauu 
      ||||   ||||||| ||  ||||| ||||||   |||| g
      ucac   UGUAGUA UG  CUGUC UAAUcu   gcuag 
uuucgg    agU       G  GU     A      cuu      


mirna_id: spu-mir-9
hairpin:
u   ac    -u -u  u   c        U        GUAUGa       c 
 cau  ugac  c  gc uuu UCUUUGGU AUCUAGCU      gugaugu a
 |||  ||||  |  || ||| |||||||| ||||||||      |||||||  
 gua  acug  g  cg gaa agaaacca uggaucga      uacuacg a
u   -c    uu uc  u   u        u        ----aa       u 


mirna_id: spu-mir-10
hairpin:
uuucuucacu       cu    ucA    U U    C          ---u  -   uuu 
          uuuuggg  uaca   ACCC G AGAU CGAAUUUGUG    cc gag   c
          |||||||  ||||   |||| | |||| ||||||||||    || |||    
          aggaccc  augu   uggg c ucua gcuuagacac    gg cuc   u
--------uc       -u    caa    u -    u          ugau  u   cgc 


mirna_id: spu-mir-22
hairpin:
cag    gaa         -a    u       a  aaaa    g 
   ucua   acgcuucau  ggca gcugaua gu    uggu a
   ||||   |||||||||  |||| ||||||| ||    ||||  
   agAU   UGUGAAGUG  CCGU CGACuau ca    acug g
caa    --A         GC    -       -  -gua    a 


mirna_id: spu-mir-29a
hairpin:
----caa           u  -      g         gauaguguucuguu 
       ucuuccucuac gc cugguu caacuggug              g
       ||||||||||| || |||||| |||||||||               
       agaaggggaug CG GACUAA GUUGACCAC              u
uacuccc           u  A      A         GAAucuagcugaga 


mirna_id: spu-mir-31
hairpin:
-uaca     -     g   A    AG   UU          ---    uu 
     aacca gugga aaa GGCA  AUG  GGCAUAGCUg   ugau  a
     ||||| ||||| ||| ||||  |||  ||||||||||   ||||   
     uuggu cacuu uuu ccgu  uac  cugugucgac   auua  a
gcuug     u     a   a    ca   uu          cca    ua 


mirna_id: spu-mir-33
hairpin:
au  -   -      ag     G        CG           cuuucuc 
  cu cuu ucuugu  ccaug UGCAUUGU  UUGCAUUGCAU       u
  || ||| ||||||  ||||| ||||||||  |||||||||||        
  ga gaa agaacg  gguau acgugaca  aacgugaugua       a
-c  c   u      ga     a        ag           uccccau 


mirna_id: spu-mir-34
hairpin:
ccu    ----    g       uC   AG      U         uuuucg 
   gauu    ggcu ccuuccu  GGC  UGUAGU AGCUGGUUG      a
   ||||    |||| |||||||  |||  |||||| |||||||||      c
   cuaa    cuga ggaagga  ccg  acgucg ucgaccaac      c
-uu    aguu    -       cc   gg      u         cacuaa 


mirna_id: spu-mir-71
hairpin:
acag   c       -  u a U        U             ------  a 
    aau gguguuc cc g g GAAAGACA GGGUAGUGAGAUU      ug c
    ||| ||||||| || | | |||||||| |||||||||||||      || u
    uua ucauagg gg c c cuuuuugu cuuaucacucuaa      ac a
-aca   u       u  u c -        -             caaaac  u 


mirna_id: spu-mir-79
hairpin:
uucauac    -u -u  u   c        u        guauga       c 
       ugac  c  gc uuu ucuuuggu aucuagcu      gugaugu a
       ||||  |  || ||| |||||||| ||||||||      |||||||  
       acug  g  cg gaa AGAAACCA UGGAUCGA      UAcuacg a
---guac    uu uc  u   U        U        ----AA       u 


mirna_id: spu-mir-92a
hairpin:
-----cac      u    u       uugccu    cc       -ca    u 
        gaaucu gucu guagguc      cgag  caauauu   gugu a
        |||||| |||| |||||||      ||||  |||||||   ||||  
        cuugga uagg CAUCCGG      GUUC  GUUAUaa   cacg c
ccucuaau      -    U       --CCCU    AC       cua    u 


mirna_id: spu-mir-92b
hairpin:
--------    a      gu  A     AC    C        - ---uu    u 
        ggug uugaug  cA GUCGG  CGAG GCAAUGUU g     ccuc a
        |||| ||||||  || |||||  |||| |||||||| |     ||||  
        ccac aacuac  GU CGGCC  GUUC CGUUAUaa c     ggag u
uacuaaaa    -      uC  C     CU    A        g uuuuc    u 


mirna_id: spu-mir-92c
hairpin:
----gua       -   a  u     u  g    u     u  uccac     a 
       gagggca gca gc ggucg ga gagu gcaau ug     augau a
       ||||||| ||| || ||||| || |||| ||||| ||     |||||  
       cucccgu cgu CG CCGGC CU CUCA CGUUA ac     uacua u
acucuaa       u   c  U     C  G    -     U  -----     a 


mirna_id: spu-mir-96
hairpin:
         -        U    C       ---------  ua    g 
ucuagucug UUUGGCAC AGCA AUUUUGC         ug  ccuc a
||||||||| |||||||| |||| |||||||         ||  ||||  
agguuagac gaaccgug uugu uagaacg         ac  ggag a
         c        u    a       ugugcuguu  uc    a 


mirna_id: spu-mir-124
hairpin:
cuucuuauc     -  -u    a            au        uauau 
         caucc cg  ucuu guguucacugug  ccuugauu     u
         ||||| ||  |||| ||||||||||||  ||||||||     c
         guggg gc  ggaA CGUAAGUGGCGC  GGAAUuaa     u
--cuuuaaa     a  uc    C            AC        caaaa 


mirna_id: spu-mir-125
hairpin:
aaagaga   -     c      C       CC          A  ugcuuu 
       gac ugccc ccaaaU CCUGAGA  CUAACUUGUG ug      u
       ||| ||||| |||||| |||||||  |||||||||| ||       
       cug gcggg gguUUA GGACUCU  GGUUGGACAc ac      a
---cgua   u     u      A       AU          -  uaaacu 


mirna_id: spu-mir-133
hairpin:
---  cg  aa      c   uua      aaac   a        -  gaa 
   uc  ga  auguag gcu   gcuggu    ggg accaaauc gu   g
   ||  ||  |||||| |||   ||||||    ||| |||||||| ||   u
   ag  cu  uacguc cga   CGACCA    CCC UGGUUUag cg   a
aac  au  --      a   UGC      ACUU   C        g  uaa 


mirna_id: spu-mir-153
hairpin:
-------    -  ag                U          --    u   uu 
       cccg cc  cccgaUCAUUUUUGUG UUAUGCAACU  uuug auu  c
       |||| ||  |||||||||||||||| ||||||||||  |||| |||   
       gggu gg  gggUUAGUGAAAACAC GAUACGUUga  agac uag  a
caaucuc    u  ga                U          ug    -   cc 


mirna_id: spu-mir-182
hairpin:
-   ucuauu         U  U     UCA     -ua  cuc 
 gcc      UUUGGCAAU GA AGAAU   CACUg   ac   a
 |||      ||||||||| || |||||   |||||   ||    
 ugg      gaaccguua cu ucuug   gugac   ug   u
g   ---ucc         -  c     ---     uaa  uau 


mirna_id: spu-mir-184
hairpin:
--------     u   -cu         -cc    u c     -   auacuau 
        gucuu uau   uucuuauca   cucu g ccggc cga       g
        ||||| |||   |||||||||   |||| | ||||| |||       u
        cagaa aua   GGGAAUAGU   GAGG C GGUcg guu       u
acggugca     u   uuC         CAA    - A     c   aaaguua 


mirna_id: spu-mir-252a
hairpin:
cacgugacuauguuccgucC             CG      aacugagaaggaaaguga 
                    UAAGUACUAGUGC  UAGGUU                  a
                    |||||||||||||  ||||||                   
                    auucaugaucaug  guccag                  g
-------------------a             au      acucuucgauaccagauc 


mirna_id: spu-mir-252b
hairpin:
cuuaug    ---          C        A   CC       c g   a 
      ucca   cguugccgau UAAGUAGU GUG  GCAGGUA u auu u
      ||||   |||||||||| |||||||| |||  ||||||| | |||  
      aggu   gcaacgguua auucaucg cac  uguccau a uga a
acuaaa    uga          c        g   -a       - g   a 


mirna_id: spu-mir-278
hairpin:
--caaa     -      cc G         C      A     uca   u 
      cugcc ucuucu  U GAAUGAAAG CUCGCC AUCug   uug u
      ||||| ||||||  | ||||||||| |||||| |||||   |||  
      gaugg agaaga  A CUUGCUUUC GGGUGG Uggau   aau a
aucaua     u      UU G         A      C     -cg   c 


mirna_id: cte-mir-67
hairpin:
agc                - ug u    c    -c  g 
   gaucuuaccucauuca g  g guug gaug  ug a
   |||||||||||||||| |  | |||| ||||  ||  
   cuggaaUGGAGUAAGU C  C CAAC CUac  gc a
gua                A GU -    A    uc  g 


mirna_id: lgi-mir-375
hairpin:
uaga  aaagug   -   -aac    c       uu  u        uuaaa 
    ga      guc gcc    ugac cgagccg  ug aacaaggc     u
    ||      ||| |||    |||| |||||||  || ||||||||      
    cu      cag cgg    AUUG GCUCGGC  GC UUGUUUug     u
--ug  --gaaa   u   aaac    C       UU  -        uaaca 


mirna_id: sko-mir-193b
hairpin:
aua      g        u       ca      aacgu 
   uguuuu gggguuuc cuggcca  guauga     a
   |||||| |||||||| |||||||  ||||||      
   acaaAA CCCUAAAG GACCGGU  CAUacu     c
aag      A        C       --      ccuaa 


mirna_id: cte-mir-2d
hairpin:
cacccucauu       u   cu          -       uc   -u  c 
          gagaacc gca  ugaucaaggu ggcugug  uug  gu c
          ||||||| |||  |||||||||| |||||||  |||  || a
          uuuuugg cgu  ACUGGUUUCG CCGACAC  Aac  cg c
---ccacuac       u   uU          U       UA   uu  u 


mirna_id: cte-mir-216b
hairpin:
gc    c       A       A       auaaccc    gc 
  uugg UAAUAUC GCUGGUA UUCUGAg       cgug  c
  |||| ||||||| ||||||| |||||||       ||||  a
  aacc guuauag cggccgu aggacuc       guac  u
-u    a       c       -       -------    aa 


mirna_id: cte-mir-242
hairpin:
----------ccaau         ua auU   G       UG  C     -g  guu 
               cguuaacca  g   UGC UAGGUGU  UG ACAGA  gu   a
               |||||||||  |   ||| |||||||  || |||||  ||    
               gcaguuggu  c   acg auccgca  ac ugucu  ua   c
caauuaaacuucuac         gc cau   g       gu  c     ga  aua 


mirna_id: lgi-mir-242b
hairpin:
---------           CG    CAUU         u  u 
         uugaaauaUUG  UAGG    GUGCACAGU gg c
         |||||||||||  ||||    ||||||||| || a
         ggcuuugugac  aucc    uacgugucg uc a
aguuuaucg           au    aucu         c  u 


mirna_id: lgi-mir-252b
hairpin:
------guuguc     ugg    uA            CC       - g  a 
            uguca   uaac  UAAGUAGUGGUG  GCAGGUA u au u
            |||||   ||||  ||||||||||||  ||||||| | ||  
            auagu   auug  auuuaucacuac  cguccau g ua u
agaaccacugua     cua    uc            uu       c g  g 


mirna_id: sko-mir-375
hairpin:
ccg         ga    c      cc    u  uggcuuau    u 
   guguuguug  uugu cgggcc  acga ca        agcg a
   |||||||||  |||| ||||||  |||| ||        ||||  
   cacaauaau  AGCG GCUCGG  UGCU GU        Ucgc a
uag         uc    C      CU    U  -------U    a 


mirna_id: spu-mir-183
hairpin:
auuu  -    - U        A       CA    g  uu   u 
    cc ucgu c AUGGCACU UAGAAUU  CUGu ug  gug u
    || |||| | |||||||| |||||||  |||| ||  |||  
    gg agua g uaccguga aucuugg  gaca au  uac g
----  u    c u        c       uc    -  gc   c 


mirna_id: spu-mir-219
hairpin:
---uccau   a     cu        U     A     A      -   aa 
        gcg guguu  ccguUGAU GUCCG ACGCA UUCUUG uug  u
        ||| |||||  |||||||| ||||| ||||| |||||| |||  u
        cgc cauag  ggugACUA CAGGC UGUGU AAGAac gau  u
uccacgau   -     uu        -     A     C      u   cc 


mirna_id: aqu-mir-2014
hairpin:
-u     a             C  GGG      u  aaggaa        aaa               uga   c     
  guggu uugUAGGUCGGGC UG   GGCAGG gg      uggcggcc   agcggcaagggagag   ugg ugca 
  ||||| ||||||||||||| ||   |||||| ||      ||||||||   |||||||||||||||   ||| ||| c
  cacca aACAUCUAGCCUG AC   CCGUcc cc      accgucgg   ucgucguuuucucuu   auc acgu 
gg     g             A  AAA      u  -----a        gcg               --g   -     


mirna_id: aqu-mir-2015
hairpin:
-----      gau  a           U         A   a   uaa    -   c 
     ucucau   gu uugUCAUGUAU GUGGAGGGG GAg cuu   ggag uag u
     ||||||   || ||||||||||| ||||||||| ||| |||   |||| ||| u
     agagug   ca aACAGUACGUA UACCUCUCC cuc gag   ccuc guc u
guagu      -au  a           C         A   -   -ua    u   a 


mirna_id: aqu-mir-2016
hairpin:
--           C    U        gauuaa     ----        uu    c    u 
  ugUAGAUUGGG UUGG CGGCAGAu      aagag    auuaaguu  uguc uuuu c
  ||||||||||| |||| ||||||||      |||||    ||||||||  |||| ||||  
  ACAUCUAAUUC GACC GUCGUcua      uucuc    uaguucga  acag agaa a
gg           U    U        ----aa     aacg        uc    a    a 


mirna_id: aqu-mir-2017
hairpin:
-------     g   gg   A         -              ucuagcaa     a  a 
       uggau agg  uug GUACACGGG GUAUGGGUAGUgcu        ggauu ua u
       ||||| |||  ||| ||||||||| ||||||||||||||        ||||| ||  
       accua ucc  aAC CGUGUGUCC CGUGUCCAUcacga        ccuga au c
aagcuau     -   -a   C         A              ---uuuua     a  a 


mirna_id: aqu-mir-2018
hairpin:
--ca        GA C G            aaa auaa     cg    ---    u        caua         
    gugUGUCG  G C GAGGUUCCGGAg   g    aagcc  ugca   ggca uggaauga    aaccgguu 
    ||||||||  | | ||||||||||||   |    |||||  ||||   |||| ||||||||    ||||||| g
    cACACAGC  C G UUCCAGGGCcuc   c    uucgg  acgu   uugu accuugcu    uugguuau 
guga        UC A G            --- --ga     ca    ggu    u        ----         


mirna_id: aqu-mir-2019
hairpin:
cga   A      U           C      cu  cu    a ac c   c  u      
   uuc AAGUGA CGGGUUGCCGU UGagcu  ag  agcc u  c agg cu guuaa 
   ||| |||||| ||||||||||| ||||||  ||  |||| |  | ||| || |||| c
   aAG UUCACU GUUCGAUGGCA acucgg  uc  ucgg a  g ucc ga caauu 
---   A      C           C      --  --    a ga a   u  c      


mirna_id: aqu-mir-2020
hairpin:
--      G                   acagucacaaaccagacugaccgguuu 
  ugcUGG UAGUGUGUCUUUUCGGAau                           c
  |||||| |||||||||||||||||||                           u
  aCGACC AUCAUACGGGAAGGCcuua                           c
uc      A                   cucuuuggacagucgaggccaguauua 


mirna_id: cte-mir-1992
hairpin:
-cu     u         -  gg          uacca 
   guguc cgucggugg au  uugcugguag     u
   ||||| ||||||||| ||  ||||||||||     u
   cacaG GUAGUCACC UG  GACGACUauc     g
ccg     U         A  UU          cgacc 


mirna_id: cte-mir-1993
hairpin:
-gug       g    u       c  u  -      
    cauuucg gaau ucggcau au cu guugg 
    ||||||| |||| ||||||| || || |||| c
    guAGAGC CUUA AGUCGUA UA ga caauu 
uuua       A    U       U  U  u      


mirna_id: cte-mir-1994
hairpin:
gguu  g  uc   u   a         g  c    uauc       
    gu ca  ggg gga gcgcugucu ca cgga    cggauu 
    || ||  ||| ||| ||||||||| || ||||    ||||| g
    ca gU  CCC CCU UGUGACAGA GU gccu    gccuau 
---g  g  CU   U   G         -  u    ----       


mirna_id: cte-mir-1987
hairpin:
---aau      u    u    a   uc    ucu 
      cacgac uuac ucug gca  uugu   u
      |||||| |||| |||| |||  ||||    
      GUGUUG AAUG AGAC CGU  aacg   g
aagcaC      U    U    -   CA    ucg 


mirna_id: cte-mir-1989
hairpin:
cc  u     U  C             aagu 
  ag UCAGC GU AUGAUGCCUUCuu    u
  || ||||| || |||||||||||||    u
  uc aguug ca uacugcgggagaa    u
gc  c     u  a             caag 


mirna_id: cte-mir-2001
hairpin:
cccguuccuca g   U  C        U      Gaag  a 
           c UUG GA CGUUAUAA GGGCAU    uc u
           | ||| || |||||||| ||||||    || u
           g aac cu gcaauauu cucgua    ag c
---------gc g   u  a        c      -acg  u 


mirna_id: cte-mir-1995
hairpin:
cag    -       cuGU    C  G     U      c   u 
   ggcg aaguuuu    ACAU UC CAUUG GACCAU ugu g
   |||| |||||||    |||| || ||||| |||||| ||| u
   cugc uucgaaa    ugua ag guaac uuggua gca u
gag    c       uagu    u  g     u      c   a 


mirna_id: cte-mir-1996a
hairpin:
uc  u  C    G     U       G    guu 
  gc gu UCAA UGAGG CAGUGCU CUgu   u
  || || |||| ||||| ||||||| ||||    
  ug ca aguu acuuc gucacgg gaca   u
gu  c  a    a     u       g    auc 


mirna_id: cte-mir-1997
hairpin:
cau  -          u         -      c   cguc    ga 
   gc gcggcuccgu ggguuggug ggaccu cag    aguu  c
   || |||||||||| ||||||||| |||||| |||    ||||   
   cg cgcugggguA CCCGACUAC CUUGGA GUC    Ucaa  c
uuc  u          C         A      C   ----    ga 


mirna_id: cte-mir-1998
hairpin:
--c                c    cca     uuu     cc   a 
   uggugguguauauuuc gcgu   gacuc   guggu  ugc a
   |||||||||||||||| ||||   |||||   |||||  |||  
   accACUACAUGUAGAG CGCA   UUgag   uauua  acg u
cca                A    -AG     --c     -a   g 


mirna_id: cte-mir-1999
hairpin:
uau     c              u         a    ---    c 
   gccau ggaggcgggcuuaa cuuuggcua auag   ugaa a
   ||||| |||||||||||||| ||||||||| ||||   |||| c
   cggua ucucugCCUGGGUU GAAACCGAU UAUc   acuu a
cau     -              U         G    cga    a 


mirna_id: cte-mir-2000
hairpin:
cuu         uac        ugg  u         uua 
   cgcauuucu   cuggaagu   ga ggcuuuuau   c
   |||||||||   ||||||||   || |||||||||   a
   guguagagg   GACUUUCA   CU CUGAAAaug   u
ucu         cUU        UCA  U         uuc 


mirna_id: cte-mir-1996b
hairpin:
guuucu   -    u     A   AG    GU   --         aaug  acu 
      agc gucu ccagc UCA  UGAG  CAG  AUCUUGGgu    gu   a
      ||| |||| ||||| |||  ||||  |||  |||||||||    ||    
      ucg caga ggucg agu  acuc  guc  uaggaccca    cg   u
------   u    c     c   ca    uu   au         ---g  guu 


mirna_id: cla-mir-1992
hairpin:
ccuc      c  - ug          guuuu 
    caucag gg a  auugcuggua     a
    |||||| || |  ||||||||||      
    GUAGUC CC U  UGACGACUau     u
-UGU      A  A GU          aaaca 


mirna_id: cla-mir-1994
hairpin:
cuuc  uu         u    a    ugau 
    gg  ggacaugcu gucu caug    u
    ||  ||||||||| |||| ||||     
    CC  CCUGUGUGA CAGA GUac    u
-GCU  CU         -    -    uaau 


mirna_id: hru-mir-1984
hairpin:
----U   C      U   GA      u u 
     GCC UAUCCG CAG  ACUGUG g g
     ||| |||||| |||  |||||| | a
     cgg auaggu guc  ugacac c u
cuacc   c      -   ug      c u 


mirna_id: hru-mir-1985
hairpin:
-----U      U     A U       uucg 
      GCCAUU UUAUC G CACUGUG    a
      |||||| ||||| | |||||||     
      cgguaa aguag c gugacgc    a
auaguc      c     - u       ucaa 


mirna_id: hru-mir-1986
hairpin:
ugguuguggg        g      cg    a   u 
          cgcggguc uggggg  ccac guc a
          |||||||| ||||||  |||| ||| u
          GUGCCUAG ACCCUU  GGUg cag u
--------UA        A      UA    a   u 


mirna_id: hru-mir-1990
hairpin:
-  acg       A       GG     A  -   u 
 gc   ugcAGUA GUUGAUG  GUCCC GG uug c
 ||   ||||||| |||||||  ||||| || |||  
 cg   acgucau caacugc  caggg cc aau u
g  gga       -       au     c  u   a 


mirna_id: hru-mir-1991
hairpin:
--cuuCU        U  UCG       -----  u 
       UACCCUGU AA   GAGAAGU     gc a
       |||||||| ||   |||||||     || u
       augggaca uu   cucuucg     cg g
cguuuau        c  -ug       ucccu  a 


mirna_id: hma-mir-2022
hairpin:
cga    u  a      ga               u 
   aauc gg gacgaa  cagcuggcaaauauu u
   |||| || ||||||  ||||||||||||||| u
   uuag CC CUGUUU  GUUGAUCGUUUauga a
uua    U  C      UC               c 


mirna_id: isc-mir-2001
hairpin:
uccugg      U    C   U   A       G   guc 
      ccgccU GUGA CGU ACA UGGGCAU uug   c
      |||||| |||| ||| ||| ||||||| |||   a
      ggcggg cacu gca ugu acccgua gac   c
----ca      u    u   c   c       -   gug 


mirna_id: lgi-mir-1992
hairpin:
 ug               - ug     ag    uucc 
u  uugauaagucagugg a  auugc  gaua    a
|  ||||||||||||||| |  |||||  ||||     
a  aauuGUUUAGUCACC U  UGACG  CUau    u
 gu               A GU     -A    ugac 


mirna_id: lgi-mir-1993
hairpin:
-  au      g      a          cc   aau 
 gu  auuucg gaauau ggcauaaugc  guu   a
 ||  |||||| |||||| ||||||||||  |||    
 cg  uAGAGC CUUAUA UCGUAUUAUg  caa   c
u  cc      A      G          --   guu 


mirna_id: lgi-mir-1994a
hairpin:
- u         a u   u  c     c    cccg 
 c cucagggga g cac cu gucuc augc    a
 | ||||||||| | ||| || ||||| ||||     
 g gaGUUCCCU C GUG GA CAGAG Uacg    u
a u         C U   U  -     -    acua 


mirna_id: lgi-mir-1994b
hairpin:
---u   c   a  a    u      a    uuac 
    ucu agg ag acau cugucu caug    a
    ||| ||| || |||| |||||| ||||     
    ggA UCC UC UGUG GACAGA GUac    c
acuc   C   C  C    U      -    caau 


mirna_id: lgi-mir-1984
hairpin:
augccuUG     U   UC   A      -a   a 
        CCCUA CCG  AGG ACUGUG  uau g
        ||||| |||  ||| ||||||  ||| u
        gggau ggc  ucc ugacac  aua u
--ugacaa     -   ua   g      ag   a 


mirna_id: lgi-mir-1985
hairpin:
ugc  U        UAU   U      -  uuc 
   ca GCCAUUUU   CAG CACUGU GA   a
   || ||||||||   ||| |||||| ||    
   gu ugguaaga   guc gugaca cu   u
gua  u        -uu   c      u  uau 


mirna_id: lgi-mir-1986
hairpin:
-cu    ug g        g      ca     cuua 
   auug  g cgcggauc uggggg  ccacu    c
   ||||  | |||||||| ||||||  |||||    u
   ugac  U GUGCCUAG ACCCUU  GGUgg    u
acu    gu A        A      UA     cacu 


mirna_id: lgi-mir-1988
hairpin:
cca             AG              A       ac 
   agcugucuuguuc  UGGUUUUCCGUUGC CAUGCgu  a
   |||||||||||||  |||||||||||||| |||||||  u
   uugauagaauagg  acuagagggcaacg guacgua  a
uua             ca              c       cg 


mirna_id: lgi-mir-1989
hairpin:
gac        G           U    uu  g 
   uaUCAGCU UCAUGAUGCCU Ccug  uu g
   |||||||| ||||||||||| ||||  || a
   augguugg aguauuacgga gggu  ga a
uua        a           u    uu  g 


mirna_id: lgi-mir-2001
hairpin:
uac  u       G   C   U    U        ag 
   cg gaccuUU UGA CGU AUAA GGGCAUUu  a
   || ||||||| ||| ||| |||| ||||||||  a
   gc cugggaa acu gca uauu cucgugaa  u
cuu  u       g   a   u    c        gu 


mirna_id: lgi-mir-1990
hairpin:
auu     -    A       GG     A  uua 
   cgugc AGUA GUUGAUG  GUCCC GG   u
   ||||| |||| |||||||  ||||| ||   u
   gcacg ucau caacugc  caggg cc   u
cgc     a    -       au     c  ugu 


mirna_id: lgi-mir-1991
hairpin:
uuu     GU        U  U   A     cuuaua 
   guaaa  UACCCUGU AA CGA GAAGU      u
   |||||  |||||||| || ||| |||||      u
   cauuu  augggaca uu gcu cuuca      u
cgc     au        c  u   -     cucuau 


mirna_id: nve-mir-2022
hairpin:
agaucgccu     u         -u      u      g 
         gaaag cgggauaaa  caacug caagug u
         ||||| |||||||||  |||||| |||||| u
         uuuuc GCCCUGUUU  GUUGAU GUUUac g
-------uc     C         UC      C      u 


mirna_id: sko-mir-2001
hairpin:
a           C       A       --aucaa   c 
 cguugUUGUGA CGUUAUA UGGGCAU       gca c
 ||||||||||| ||||||| |||||||       |||  
 guaacaacauu gcgaugu auccgua       cgu a
-           u       c       auacuaa   a 


mirna_id: sko-mir-2012
hairpin:
aua        U        C            -  ga 
   uuacuugg AGUACUGG AUAUGGACAUUG gu  u
   |||||||| |||||||| |||||||||||| ||   
   agugaacC UUAUGACU UAUACUUGUAAc ca  u
uag        U        U            u  au 


mirna_id: sko-mir-2013
hairpin:
uggaa   c      uu               u  u     g    aucu 
     uau ugcucu  acugcacaucgcuau uc ugcug cacc    g
     ||| ||||||  ||||||||||||||| || ||||| ||||    a
     aua augagg  ugacGUGUGGUGAUG AG ACGAC GUgg    u
-acaa   a      --               U  U     -    aaau 


mirna_id: sko-mir-2008
hairpin:
uucu     uu    u       a   c           uucgca 
    ucauc  uuac ccguauu aca ugagguugaug      g
    |||||  |||| ||||||| ||| |||||||||||      u
    gguag  aaug GGCAUAA UGU GCUCCGACUAc      a
-gau     uc    c       C   C           caauca 


mirna_id: sko-mir-2011
hairpin:
augug      u     cg       u        aa     caaaa 
     uuuauu caaug  gucacug cacaccuu  ggugu     u
     |||||| |||||  ||||||| ||||||||  |||||      
     agauaa guuaC  UAGUGAU GUGUGGAA  CCAca     u
-auca      c     AG       U        --     uuaaa 


mirna_id: spu-mir-2001
hairpin:
u g   A   G    A    A       -  a  a 
 u uca UGU ACCG UAUA UGGGCAU ga ua u
 | ||| ||| |||| |||| ||||||| || ||  
 a agu aca uggc auau accugua cu gu c
u g   a   g    g    g       a  a  a 


mirna_id: spu-mir-2012
hairpin:
u    u    a      U    U          -uu    u 
 gggu cuug UAGUAC GGCA AUGGACAUUG   guaa a
 |||| |||| |||||| |||| ||||||||||   |||| a
 uccg gaac gucaug cugu uacuuguaac   cauu u
g    u    c      c    c          ucu    c 


mirna_id: spu-mir-2013
hairpin:
---ugau    -    uu               ua        ---g   cgu 
       gucu acug  cuacgccgcuacauc  guugcauu    uga   c
       |||| ||||  |||||||||||||||  ||||||||    |||    
       caga ugac  gaUGUGGUGAUGUAG  CGACGUaa    acu   u
accuuac    a    uc               UA        aggg   uug 


mirna_id: spu-mir-2002
hairpin:
uau     -  a         -   A       U    U  u  g  a 
   ucauc ag cugauaAGA CCA CAGGUGU AUUC CA gu ug u
   ||||| || ||||||||| ||| ||||||| |||| || || || g
   aguag uc gauUAUUUU GGU GUCUACA UAAG gu ua ac u
gau     c  g         U   C       -    U  c  g  a 


mirna_id: spu-mir-2003
hairpin:
---g   gu       -A     U    U U         ---c  ga 
    cug  uggccua  ACCCG AAGG C UAACUUGUG    ug  g
    |||  |||||||  ||||| |||| | |||||||||    ||   
    gac  gccggAU  UGGGU UUCC G AUUGGACac    ac  u
auaa   ag       GA     -    C U         auga  au 


mirna_id: spu-mir-2004
hairpin:
aga       -      c          c   c    u      ga     
   ggcuacu ugcgga cuuucugugg ugu gugu aagugu  uucu 
   ||||||| |||||| |||||||||| ||| |||| ||||||  ||| a
   ccgaugg acguuU GAAGGACACC ACA CACA Uucaca  aagu 
gua       c      U          A   -    C      -g     


mirna_id: spu-mir-2005
hairpin:
cuacu        -       cA U        GA  G         u auau 
     ugucaauc uuuggug  G CCAAUAGG  GG CAUUGCAGg g    u
     |||||||| |||||||  | ||||||||  || ||||||||| |    u
     acaguuag agaccau  c gguuaucc  uc gugacgucc c    g
---cu        u       ua u        --  g         - gaaa 


mirna_id: spu-mir-2006
hairpin:
gcc     a gu c      c         a  u   --------ug   a 
   guagc u  g caucgc accaagugu cu cag          gac u
   ||||| |  | |||||| ||||||||| || |||          |||  
   caucg g  C GUGGCG UGGUUCACA GA Guc          cug a
-cu     a ug C      A         C  -   uaaauuuuug   u 


mirna_id: spu-mir-2007
hairpin:
ucg     a       -       C    U  U     --ag   uuu 
   gcauc ugcauUA UUUCAGG AGUA AC GGUAA    ggu   a
   ||||| ||||||| ||||||| |||| || |||||    |||   u
   uguag acguaau aaagucc ucgu ug ccauu    cca   u
gug     a       u       a    -  u     cuua   cgu 


mirna_id: spu-mir-2008
hairpin:
uucuc           c      a   a  u        a gaa  u 
     cacuuuuuacc cguauu aca ug ggcugaug g   uc u
     ||||||||||| |||||| ||| || |||||||| |   ||  
     gugaggaaugg GCAUAA UGU GC CCGACUAc c   ag a
-aaca           a      C   C  U        - --a  u 


mirna_id: spu-mir-2009
hairpin:
uucaaa  cu   ua    u  g         a       c  u aa  a 
      uc  cag  aucu ug uuuuugugg acagcuc ug g  uu u
      ||  |||  |||| || ||||||||| ||||||| || |  ||  
      ag  guc  uagA AC AGAAACACC UGUUGAG ac c  aa a
cuacua  -u   gc    C  A         C       U  - ag  u 


mirna_id: spu-mir-2010
hairpin:
-uca       -u     uu  uc        --   aucuu 
    cagcaag  gcugg  uc  caguaauu  ugu     c
    |||||||  |||||  ||  ||||||||  |||      
    gucgUUC  CGACU  AG  GUCAUUaa  acg     a
uaug       CC     GU  UU        cu   auacu 


mirna_id: spu-mir-2011
hairpin:
gcacc  g    g        ca       c        c    --   uu 
     gu ccua ucucccug  gucacua cacaccuu ggug  gcu  u
     || |||| ||||||||  ||||||| |||||||| ||||  |||   
     ca gggu agggggaC  UAGUGAU GUGUGGAA CCAc  cga  u
acuaa  a    -        AG       C        -    uu   ua 


mirna_id: aqu-mir-2021
hairpin:
-a         a                  AC     -  guuaaa      ---a     ---     c    -  -   u g 
  guguuguug ugucCAUGGAAUAUCGGC  CCAUC ca      accuuc    acgau   ccacu gugc ag cua g g
  ||||||||| ||||||||||||||||||  ||||| ||      ||||||    |||||   ||||| |||| || ||| |  
  cguaacaac acAGGUGCUUUGUGGCUG  GGUag gu      uggagg    uguua   gguga cacg uc gau c u
aa         c                  GU     u  -----g      acug     gug     c    a  a   c c 


mirna_id: nve-mir-2023
hairpin:
ga   gcg          g g        C         A   - g 
  guu   ugacauaccu u uCUGCCAC UGUAUUUCU UCA c u
  |||   |||||||||| | |||||||| ||||||||| ||| |  
  cag   gcuguguggg a GGAUGGUG ACAUGAAGA Agu g c
aa   uua          a G        A         A   a a 


mirna_id: nve-mir-2024a-1
hairpin:
u      A             G      gg 
 gcuucA AAUAUCGGUGUUG GUAAAA  u
 |||||| ||||||||||||| ||||||  c
 cgaAGU UUAUAGCCAUGAC CAUUuu  a
a      G             A      ac 


mirna_id: nve-mir-2025
hairpin:
----aacaauua     -cau   a        AU            cu 
            ggcca    aca AGCUUUCG  GGCUAGAAAAUC  u
            |||||    ||| ||||||||  ||||||||||||   
            ccggu    ugU UUGAAGGC  CCGAUUUUUUag  a
uuaccauuauaa     ccgu   G        GC            ug 


mirna_id: nve-mir-2024b
hairpin:
----ag   -u  -       A             GGU    gg 
      ugc  ac ugcuucA AAUAUCGGUGUUG   AAAA  u
      |||  || ||||||| |||||||||||||   ||||  c
      acg  ug acgaAGU UUAUAGCCAUGAC   UUuu  a
aauuaa   uu  c       G             AAC    ac 


mirna_id: nve-mir-2024c
hairpin:
-               C  G      gg 
 uucAGAAUAUUGGUG UG GCAAAA  u
 ||||||||||||||| || ||||||  c
 gAGUCUUAUAACCAC AC CGUUuu  a
g               A  A      ac 


mirna_id: nve-mir-2024d
hairpin:
ca    g    cu                UGC  G      gg 
  ucag uaga  ugcuucAGAAUAUUGG   UG GCAAAA  u
  |||| ||||  ||||||||||||||||   || ||||||  c
  aguc gucu  acggagucuuauaacc   ac cguuuu  a
-a    -    uc                uua  a      ac 


mirna_id: nve-mir-2024e-1
hairpin:
----a a    g    cu                CGC  G      gg 
     c ucag uaga  ugcuucAGAGUAUUGG   UG GCAAAA  u
     | |||| ||||  ||||||||||||||||   || ||||||  c
     g aguc gucu  acggAGUCUUAUAACC   AC CGUUuu  a
ucaag a    -    uc                AUU  A      ac 


mirna_id: nve-mir-2024f
hairpin:
------------aa  ag ---a      cu                 AC  G      g   
              ag  c    gguaga  ugcuucAGAAUAUUGGU  UG GCAAAA gu 
              ||  |    ||||||  |||||||||||||||||  || |||||| | c
              uc  g    ucgucu  acggAGUCUUGUAACCA  AC CGUUuu ca 
agaacauuaaagga  aa gaag      uc                 CU  A      g   


mirna_id: nve-mir-2026
hairpin:
ac       c c cg        GU            g 
  uuguguc c c  UUUCAAAU  CUACUGAUGGAa u
  ||||||| | |  ||||||||  |||||||||||| u
  gacgcag g g  GAAGUUUA  GGUGACUACcuu g
aa       a a UU        UG            g 


mirna_id: nve-mir-2027
hairpin:
-----aauccga     u    gc    UUG       UU      C    
            gagcc uaag  uuGC   UUGGUAA  UUGCAU Ugu 
            ||||| ||||  ||||   |||||||  |||||| || u
            cuugg auuc  AACG   AACCAUU  AGCGUA acg 
aaggacuaguga     u    uu    UAA       UU      c    


mirna_id: nve-mir-2024g-1
hairpin:
accaauaag   -u  -       A             -GG         
         ugc  ac ugcuucA AAUAUCGGUGUUG   UAAAaggu 
         |||  || ||||||| |||||||||||||   ||||||| c
         acg  ug acgaAGU UUAUAGCCAUGAC   AUuuucca 
-------aa   uu  c       G             ACA         


mirna_id: nve-mir-2028
hairpin:
-----ag      -gg                  U       u 
       gacgau   agucuUAAUGUUCCUGCU GUUCCUA a
       ||||||   |||||||||||||||||| ||||||| u
       cugcug   uuaGAAUUACGAGGACGA CAAGGau a
caaauaa      aca                  U       u 


mirna_id: nve-mir-2029
hairpin:
-----ca    gu    -u     u  UA        C   G       g 
       uagu  ggca  uuagg ga  CGCAAUCC UAG UUACCAU u
       ||||  ||||  ||||| ||  |||||||| ||| ||||||| c
       guca  ccgu  aaucc CU  GCGUUAGG AUC AAUGGua a
ucguaac    au    uc     u  UC        U   A       g 


mirna_id: nve-mir-2030
hairpin:
acaccca       g               U     -   AUUg 
       caguaug ccguaUAGCAUAACA UGUAA GAG    u
       ||||||| ||||||||||||||| ||||| |||    a
       gucguau ggcAUGUCGUGUUGU ACAUU CUC    a
-ugauaa       a               U     U   Caag 


mirna_id: nve-mir-2031
hairpin:
-a                                   u 
  gaccaccuaaaaUACGGCACUCUAUUUAUGGUACU u
  |||||||||||||||||||||||||||||||||||  
  uugguggauuUUAUGCCGUGAGAUAAAUACCAUga u
aa                                   a 


mirna_id: nve-mir-2032a
hairpin:
--ucgc  g     c    cu UC             G  A   u 
      ga cucac guug  g  GCUGCGACAGUUA CU Gca u
      || ||||| ||||  |  ||||||||||||| || ||| u
      cu gagug cagu  C  CGACGUUGUCAAU GA cgu a
uuauga  g     u    aC UA             G  g   u 


mirna_id: nve-mir-2032b-1
hairpin:
gcgag     c    cu UC             G  A   u 
     cucac guug  g  GCUGCAACAGUUA CU Gca u
     ||||| ||||  |  ||||||||||||| || ||| u
     gagug cagu  C  CGACGUUGUCAAU GA cgu a
----g     u    aC UA             G  g   u 


mirna_id: nve-mir-2033
hairpin:
----------c     aucuuucu  -   -      --AA       A    -   ac    c  g    g 
           gacau        ga cuc ugAGCU    UGAUGAG GAAU caa  auug cu auau c
           |||||        || ||| ||||||    ||||||| |||| |||  |||| || |||| u
           cugug        cu gag ACUUGA    AUUGCUC CUua guu  uaac ga ugua a
uuccgucuuuc     --------  c   u      AGUC       -    a   -c    a  -    a 


mirna_id: nve-mir-2034
hairpin:
--    aaaga     g  u             A A        ccua 
  guga     gugua uu uaCUGAUGUUUUU G AUUAGCCC    a
  ||||     ||||| || ||||||||||||| | ||||||||     
  cauu     uacgu aa gUGACUGUAAAAA C UAAUCGgg    a
aa    caaag     a  c             A G        aagu 


mirna_id: nve-mir-2035-1
hairpin:
guggcguauuA     U             ugaagu     a 
           CAUGG CUGUUACAAGGGA      gcucg g
           ||||| |||||||||||||      ||||| u
           GUACC GACAGUGUUCCcu      ugagc u
---uuaagAGG     C             ------     u 


mirna_id: nve-mir-2036
hairpin:
--auaaga       c    cc        -A         A   cuu 
        gucgugc agga  CGGUGAGA  CGUACAGUA GCA   g
        ||||||| ||||  ||||||||  ||||||||| |||    
        cggcacg uccu  GCUACUCU  GCAUGUUAU Ugu   a
acaaguaa       -    AU        CA         A   agc 


mirna_id: nve-mir-2037
hairpin:
----a   a     ug uc             C G     --    --  u 
     gcu ggucu  g  accguggUAAAAG C UCCAA  GCAC  Cc c
     ||| |||||  |  ||||||||||||| | |||||  ||||  ||  
     uga cuaga  c  uggUGCCAUUUUC G AGGUU  UGUg  gg u
cauac   -     gu --             A -     AG    ac  u 


mirna_id: nve-mir-2038
hairpin:
--aaccuga   gc  u  u    C C  A    C    U    cc 
         uga  cu ag gucA C UG UGAC UUAG GUCA  c
         |||  || || |||| | || |||| |||| ||||   
         acu  ga uc cAGU G AC ACUG AAUU CAgu  u
aguaguccc   gu  u  -    A U  C    U    C    ag 


mirna_id: nve-mir-2039
hairpin:
uuguaua                    ua 
       AGCCUACCUUUAUUUUAUUU  u
       ||||||||||||||||||||  a
       UCGGAUGGAAAUAAAAUAaa  u
-aaucUC                    ug 


mirna_id: nve-mir-2040a-1
hairpin:
gaucgu      --u  a         U   C     C UG    c 
      gaugcc   ac accuUCGGG CAG UACGA A  AGCG u
      ||||||   || ||||||||| ||| ||||| |  |||| c
      cugcgg   ug ugGAAGUCC GUC AUGCU U  UUgc c
-cauuu      ucc  a         C   A     C GU    u 


mirna_id: nve-mir-2041
hairpin:
--                              U          c 
  auccucggaaacccagggguAUUUUGCUCU ACGUUUCACU g
  |||||||||||||||||||||||||||||| ||||||||||  
  uaggagccuuuggguccUCAUAAAACGAGA UGCAAAGUga c
ag                              U          g 


mirna_id: nve-mir-2042
hairpin:
uuuacaauga         c            CU  C  U  u 
          cgacacacc UUAUAAAUCAUC  UG AC AC u
          ||||||||| ||||||||||||  || || ||  
          guugugugG AGUAUUUAGUAG  AC UG ug a
cgucucaguc         A            UU  A  C  u 


mirna_id: nve-mir-2040b
hairpin:
agaucau  ua  --u            U   C     C       c 
       ga  cc   accaccuUCAGG CAG UACGA ACGAGCG u
       ||  ||   |||||||||||| ||| ||||| ||||||| c
       cu  gg   uggugGAAGUCC GUC AUGCU UGCUUgc c
---auuu  gc  ucc            C   A     C       u 


mirna_id: nve-mir-2043a
hairpin:
-  --au   auaucg       U      C         U    u 
 gu    cug      aaucucu AUAUCG CUUUUGAGG UAUU u
 ||    |||      ||||||| |||||| ||||||||| |||| c
 ca    gac      uuagaGA UAUGGC GAAAACUCC AUaa u
a  gguc   ---aca       U      A         C    u 


mirna_id: nve-mir-2044
hairpin:
a   - g                              a 
 ggu u aaugagcuUUAUCAAGAUAAAUGCCAUAAA u
 ||| | |||||||||||||||||||||||||||||| g
 cca g uuacucGAAAUAGUUCUAUUUACGGUAUuu u
a   u g                              u 


mirna_id: nve-mir-2045
hairpin:
ucuuauuaaugacaauaguuuUC      U     -GU         -  u 
                       CCAGAG GUUGA   UCAUACAAg au u
                       |||||| |||||   ||||||||| || c
                       GGUCUC UAAUU   GGUAUGuuc ug u
-acauaaaauaccuuagauACAU      -     AAU         g  u 


mirna_id: nve-mir-2046
hairpin:
agagu               aC                      U 
     aaauuuuauggcauu  AUCACUUCAUAGCUAUUUACUC u
     |||||||||||||||  ||||||||||||||||||||||  
     uuuaaaauaccguaA  UAGUGAAGUAUCGAUAAAUgag a
-cagu               CA                      a 


mirna_id: nve-mir-2047
hairpin:
aucc  gag    uuc                             G  G  u 
    gg   uaaa   guaacugcucaaUUCGCCGAGCAGAUGUC GA Ag u
    ||   ||||   ||||||||||||||||||||||||||||| || || c
    cc   guuu   uauugacgagUUAAGCGGCUCGUCUACAG CU uc a
agaa  --a    ---                             A  g  a 


mirna_id: nve-mir-2048
hairpin:
guauaaaG              A              acag c 
        GCGUUUUGUUUUAG UGUCUugagggaga    u g
        |||||||||||||| ||||||||||||||    |  
        CGCAAAACAAAGUC ACAgaacucccucu    a a
---aguAA              C              ggaa g 


mirna_id: nve-mir-2049
hairpin:
auc         c           C       C   A     GA   aaca 
   auccaugag cguauucaaug AAAUGCA GCA AUGAA  UGA    a
   ||||||||| ||||||||||| ||||||| ||| |||||  |||     
   uagguacuc gcauaaguuAC UUUACGU CGU UACUU  Gcu    u
---         u           A       A   G     -A   cagc 


mirna_id: nve-mir-2050
hairpin:
gucauuu   -      ag  C       C    C      C  ca 
       cau ggcgcg  aa CCGGGUC CAGU AUCAAA GU  u
       ||| ||||||  || ||||||| |||| |||||| ||   
       gua cugugc  UU GGUCUAG GUCG UAGUUU ca  u
-caauau   g      cu  U       U    U      A  cg 


mirna_id: nve-mir-2043b
hairpin:
-  --au   auaucg       U      C         U    u 
 gu    cug      aaucucu AUAUCG CUUUUGAGG UAUU u
 ||    |||      ||||||| |||||| ||||||||| |||| c
 ca    gac      uuagaGA UAUGGC GAAAACUCC GUaa u
a  gguc   ---aca       U      A         C    u 


mirna_id: nve-mir-2051
hairpin:
auguac  g c  cc    aAA         C       UUU   ac 
      gg c cg  uaug   AUAGAAAAG UUCCGGU   uug  a
      || | ||  ||||   ||||||||| |||||||   |||   
      cc g gc  auac   UGUCUUUUC GAGGCCA   aac  u
cuaaga  a u  uu    cuG         U       --U   gc 


mirna_id: osa-MIR1846c
hairpin:
-auga  c         c        G         C     a 
     gc gccggaucu ccAGUGAG AGGCCGGGG CGCUg a
     || ||||||||| |||||||| ||||||||| |||||  
     cg cggccuagg GGUCGCUC UCUGGCCCC GUggc u
agaaa  -         c        G         A     c 


mirna_id: cfa-mir-20b
hairpin:
-g    -A           G     G   ucugg 
  uacC  AAGUGCUCACA UGCAG UAg     g
  ||||  ||||||||||| ||||| |||     c
  augg  uucacgggugu auguc auc     u
ca    cc           g     -   ucuuu 


mirna_id: cfa-mir-18b
hairpin:
        --    U    C   U     -------U    a 
ccuguguU  AAGG GCAU UAG GCAGU        Agug a
||||||||  |||| |||| ||| |||||        ||||  
ggacacgg  uucc cgua auc cguca        ucgc g
        cc    c    a   c     uccaagau    c 


mirna_id: cfa-mir-133c
hairpin:
--     uuu    a       aa  u  a        aacug 
  aaugc   gcua agcuggu  aa gg accaaauc     u
  |||||   |||| |||||||  || || ||||||||      
  uuacg   cgau UCGACCA  UU CC UGGUUuag     u
ag     ugu    G       AC  C  C        guaac 


mirna_id: cfa-mir-133a
hairpin:
-      uuu    g       aa  u  a        gccuc 
 caaugc   gcua agcuggu  aa gg accaaauc     u
 ||||||   |||| |||||||  || || ||||||||      
 guuacg   cgaU UCGACCA  UU CC UGGUUuag     u
a      uau    G       AC  C  C        guaac 


mirna_id: cfa-let-7a-2
hairpin:
c    uguu      uU   G   U             uagaa ua a 
 ugca    cccagg  GAG UAG AGGUUGUAUAGUU     u  c u
 ||||    ||||||  ||| ||| |||||||||||||     |  | c
 acgu    ggguuc  uuc auc uccgacaugucaa     a  g a
c    -ucu      cu   g   c             --uag gg a 


mirna_id: cfa-let-7b
hairpin:
-     U                     ucagggcagugaug 
 cgggg GAGGUAGUAGGUUGUGUGGUU              u
 ||||| |||||||||||||||||||||              u
 gcccc uuccgucauccaacauaucaa              g
a     -                     uagaaggcuccccc 


mirna_id: cfa-mir-7-3
hairpin:
gagugguuguggucuagu      U     A  A       U      c  au 
                  gcugug GGAAG CU GUGAUUU GUUGUu ug  g
                  |||||| ||||| || ||||||| |||||| ||   
                  cgauac ccuuc ga cacugaa caacag au  u
-----------------g      u     -  -       -      u  ca 


mirna_id: cfa-mir-10b
hairpin:
-------guaa     u        a    G     C          -Ug  au 
           cguug cuauauau CCCU UAGAA CGAAUUUGUG   gu  c
           ||||| |||||||| |||| ||||| ||||||||||   ||   
           guagc gguauaua gggg aucuu gcuuagacac   ua  c
acuucaaaaac     u        a    -     a          uga  ca 


mirna_id: cfa-mir-34b
hairpin:
     cg    -guA       UAA    C       ccu u 
gugcu  guuu    GGCAGUG   UUAG UGAUUGu   c g
|||||  ||||    |||||||   |||| |||||||   |  
cacgg  caaa    ccgucac   aauc acuaaca   g c
     aa    acua       cuc    -       uuc u 


mirna_id: cfa-mir-135a-1
hairpin:
agg         u u          UU            uuuua 
   ccucgcugu c cUAUGGCUUU  AUUCCUAUGUGA     c
   ||||||||| | ||||||||||  ||||||||||||     u
   ggggcggca g ggugccgagg  uagggauauacu     g
---         u c          -u            cacuc 


mirna_id: cfa-mir-135b
hairpin:
     --                   CAU          uugcug 
gcucu  gcuguggccUAUGGCUUUU   UCCUAUGUGA      u
|||||  |||||||||||||||||||   ||||||||||       
cgggg  ugacaucggguaccgaaaa   gggauguacu      u
     ag                   -uc          uaaucu 


mirna_id: cfa-mir-153
hairpin:
agcggugg      -             gu       -a  aa 
        ccagug ucauuuuugugau  ugcagcu  gu  u
        |||||| |||||||||||||  |||||||  ||  a
        gguuac AGUGAAAACACUG  ACGUUga  cg  u
-------a      u             AU       cc  ag 


mirna_id: cfa-mir-182
hairpin:
gcuug    c      uU       U -G      UCA      ugaggu 
     ccuc cgccgu  UUGGCAA G  UAGAAC   CACUgg      a
     |||| ||||||  ||||||| |  ||||||   ||||||       
     ggag guggua  aaccguu c  aucuug   guggcc      a
-----    c      uc       - ag      ---      uagggu 


mirna_id: cfa-mir-184
hairpin:
-----c         c      ag     -    ug 
      cccuuauca uuuucc  ccagc uuug  a
      ||||||||| ||||||  ||||| ||||   
      GGGAAUAGU AAGAGG  GGUug gaau  c
guggaU         C      CA     u    cu 


mirna_id: cfa-mir-187
hairpin:
----   g    a           - --c   -  cu 
    cuc ggcu caacacgggac c   ggg cg  g
    ||| |||| ||||||||||| |   ||| ||   
    gaG CCGA GUUGUGUUCUG G   ccc gc  c
cagg   G    C           U CUc   a  cu 


mirna_id: cfa-mir-202
hairpin:
gu               -A           G   gu 
  uccuuuUUCCUAUGC  UAUACUUCUUU agg  c
  |||||||||||||||  ||||||||||| |||   
  ggggaaaaggguacg  auguggagaag ucc  u
-g               ga           -   gg 


mirna_id: cfa-mir-210
hairpin:
--------cc      c    gg     a   - c  u      c  c -     
          uccagg gcag  cagcc cug c ca cgcaca ug g cugc 
          |||||| ||||  ||||| ||| | || |||||| || | ||| u
          gggucc uguc  GUCGG GAC G GU GCGUGU Ac c ggcc 
ccagcgcgac      c    uA     C   A U  -      C  c a     


mirna_id: cfa-mir-215
hairpin:
u        a A  A        -U          u  g 
 guacagga a UG CCUACGAA  UGAUAGACAa uu g
 |||||||| | || ||||||||  |||||||||| || c
 uaugucuu u ac ggauguuu  acugucuguu ga u
-        a a  c        uu          u  a 


mirna_id: cfa-mir-216a
hairpin:
--------    --   g  ag     u         CU   A      --a   -  u 
        gaug  gcu ug  uuggc UAAUCUCAG  GGC ACUGUG   gau gu c
        ||||  ||| ||  ||||| |||||||||  ||| ||||||   ||| ||  
        cuau  cga ac  aaucg auuaggguc  cug ugacac   cua ca a
ucccguuc    aa   g  -a     u         -u   g      ccc   a  u 


mirna_id: cfa-mir-217
hairpin:
uu     c c  a  C     C          U -   aag 
  gaugu g ag UA UGCAU AGGAACUGAU G GAU   a
  ||||| | || || ||||| |||||||||| | |||    
  cuacg c uc gu acgua uccuugacua c cug   a
-u     a u  c  u     a          c a   ggu 


mirna_id: cfa-mir-222
hairpin:
------------  c   au              -     auc   ucuu 
            cc uca  ggcucaguagccag uguag   cug    u
            || |||  |||||||||||||| |||||   |||    u
            gg agu  cUGGGUCAUCGGUC ACAUC   gac    g
ucgaucuucuac  u   cu              U     GAu   uaau 


mirna_id: cfa-mir-223
hairpin:
ccuggccuccu   -     a    cc u              gaguua       cau 
           gca gugcc cacu  g guauuugacaagcu      gacacuc   g
           ||| ||||| ||||  | ||||||||||||||      |||||||   u
           cgu cacgg guga  C CAUAAACUGUUUGA      CUGUgag   g
-----------   a     c    aC C              ------       aag 


mirna_id: cfa-mir-301a
hairpin:
     aa  a     c    ---u          ----a       
cugcu  cg augcu ugac    uuauugcacu     cuguac 
|||||  || ||||| ||||    ||||||||||     ||||| u
gacga  gu uaCGA ACUG    GAUAACGUGA     gacauu 
     aa  c     A    UUAU          Cgauc       


mirna_id: cfa-mir-301b
hairpin:
----   a      c      ---g        a  gug u 
    ccc ggugcu ugacga    guugcacu cu   c c
    ||| |||||| ||||||    |||||||| ||   | u
    ggg cuaCGA ACUGUU    UAACGUGA ga   g g
acca   g      A      AUAG        C  --a a 


mirna_id: cfa-mir-302a
hairpin:
   c    U         U           gaa 
cca cACU AAACGUGGA GUACUUGCUuu   a
||| |||| ||||||||| |||||||||||   c
ggu guga uuuguaccu cgugaaugaaa   u
   a    u         u           aac 


mirna_id: cfa-mir-302b
hairpin:
cucc    a   UU               U  ---   a 
    cuuu ACU  AACAUGGAAGUACUU Cu   uug c
    |||| |||  ||||||||||||||| ||   ||| u
    gaag uga  uuguaccuucgugaa ga   aac u
---u    a   uu               u  uaa   u 


mirna_id: cfa-mir-302c
hairpin:
    ug  UU             C    -G  u 
ccuu  cU  AACAUGGGGGUAC UGCU  ug a
||||  ||  ||||||||||||| ||||  || a
ggag  ga  uuguaccuucgug auga  ac a
    gu  cu             a    aa  a 


mirna_id: cfa-mir-302d
hairpin:
--  u u   UU                Cugugac 
  cc c ACU  AACAUGGAGGCACUUG       a
  || | |||  ||||||||||||||||       u
  gg g uga  uuguaccuucgugaau       g
gu  u -   uu                aaaaaua 


mirna_id: cfa-mir-367
hairpin:
    g           UA     CUCUg      a 
ccau ACUGUUGCUAA  UGCAA     uucaau c
|||| |||||||||||  |||||     ||||||  
ggua ugguaacgauu  acguu     agguua a
    g           uc     ----a      a 


mirna_id: cfa-mir-489
hairpin:
       c     g            gc c    ua     a 
guggcag uuggu gccguaugugug  g cauu  cuuga c
||||||| ||||| ||||||||||||  | ||||  |||||  
caucguc aauCG CGGCAUAUACAC  C GUGa  ggauu c
       a     G            UA A    --     u 


mirna_id: cfa-mir-96
hairpin:
-      gg  g  U        A      UU      ---   uc 
 cugcuu  cc au UUGGCACU GCACAU  UUGCUu   gug  u
 ||||||  || || |||||||| ||||||  ||||||   |||   
 ggcgaa  gg ua aaccguga cgugua  aacgag   cgc  c
g      aa  g  u        -      cu      ucu   cu 


mirna_id: cfa-mir-103-2
hairpin:
uu  g      --   u  u           ----    ua 
  gu cuuuca  gcu cu uacagugcugc    cuug  g
  || ||||||  ||| || |||||||||||    ||||  c
  ca gaaAGU  CGG GA AUGUUACGACG    ggac  a
-c  a      AU   -  C           Aacu    uu 


mirna_id: cfa-mir-33b
hairpin:
---  ---    -   c   c  -          UU         g  ag 
   gc   gggc ggc ccg gG UGCAUUGCUG  GCAUUGCac ug  u
   ||   |||| ||| ||| || ||||||||||  ||||||||| ||  g
   cg   cccg ccg ggc cc acgugacggc  cgugacgug gc  a
cca  guc    g   a   -  g          uc         g  gc 


mirna_id: cfa-mir-145
hairpin:
-----  u     c  UC    U  C            uagau 
     ug ccuca gG  CAGU UU CCAGGAAUCCCU     g
     || ||||| ||  |||| || ||||||||||||     c
     ac ggagu uc  guca aa gguccuuagggg     u
uuggu  u     -  uu    u  a            uagaa 


mirna_id: cfa-mir-196a-1
hairpin:
-------      ga    a UA   A    C         - Gc u  a 
       acugcu  guga u  GGU GUUU AUGUUGUUG G  c gg u
       ||||||  |||| |  ||| |||| ||||||||| |  | ||  
       ugacgg  cacu a  cca caaa uacaacaac c  g uc u
ucgucau      --    c gc   c    u         a aa -  u 


mirna_id: cfa-mir-200b
hairpin:
-----   a     ---   -    UG     C      u  ug 
     gcc ucgcC   AUC UUAC  GGCAG AUUGGA gg  u
     ||| |||||   ||| ||||  ||||| |||||| ||  c
     cgg ggcgg   uag aaug  ccguc uaaucu cu  a
cgucc   -     cag   u    gu     a      -  gg 


mirna_id: cfa-mir-200a
hairpin:
c    - c   g        -             C    uu  uu 
 uggg c ucu ugggCAUC UUACCGGACAGUG UGGA  uc  g
 |||| | ||| |||||||| ||||||||||||| ||||  ||  g
 accc g gga acuuguag aauggucugucac aucu  ag  c
c    a u   a        c             a    -c  uu 


mirna_id: cfa-mir-203
hairpin:
--  c   g       u c         u    g    a     - ug 
  cc ggc cgcuggg c agugguucu aaca uuca caguu c  u
  || ||| ||||||| | ||||||||| |||| |||| ||||| |   
  gg ccg gcggccc G UCACCAGGA UUGU AAGU Guuaa g  a
gc  c   g       c A         U    A    -     c cg 


mirna_id: cfa-mir-208a
hairpin:
---a  c ug       g     gg      c  a 
    cg a  agcuuuu gcucg  uuauac ug u
    || |  ||||||| |||||  |||||| || g
    gu U  UCGAAAA CGAGC  AAUAug ac c
acug  - GU       A     AG      c  u 


mirna_id: cfa-mir-208b
hairpin:
c        g          c   cg        cu 
 cucucagg aagcuuuuug ucg  uuauguuu  c
 |||||||| |||||||||| |||  ||||||||  a
 gggagucU UUUGGAAAAC AGC  AAUAuaag  u
-        G          A   AG        cc 


mirna_id: cfa-mir-451
hairpin:
u    g        gA                 A 
 uggg auggcgag  AACCGUUACCAUUACUG G
 |||| ||||||||  |||||||||||||||||  
 accc ugucguuc  uugguaaugguaaugau U
-    a        uc                 U 


mirna_id: cfa-mir-375
hairpin:
-----   c    a      ccu  c     c  gac 
     gcc cgcg cgagcc   cg acaaa cg   c
     ||| |||| ||||||   || ||||| ||    
     cgg GUGC GCUCGG   GC UGUUU gc   u
gggga   A    -      CUU  U     u  gag 


mirna_id: cfa-mir-190b
hairpin:
u   u     -U               G     -   aa 
 gcu cugug  GAUAUGUUUGAUAUU GGUUg uuu  u
 ||| |||||  ||||||||||||||| ||||| |||   
 uga gacau  uuauacaagcuauaa ucaac aag  u
g   c     uc               a     u   ga 


mirna_id: cfa-mir-147
hairpin:
a     u    c   ug   a    g       aacuagauua     
 cucua gaau uag  gaa cauu cugcaca          ugga 
 ||||| |||| |||  ||| |||| |||||||          ||| u
 gggau uuua AUC  CUU GUAA GGCGUGU          acca 
c     u    c   GU   C    A       ---------G     


mirna_id: cfa-mir-490
hairpin:
aaaguucauugu      c      --         g   cac   u 
            ucgaca caugga  ucuccaggu ggu   guu a
            |||||| ||||||  ||||||||| |||   |||  
            aguuGU GUACCU  GGAGGUCCA Cca   uag g
------------      C      CA         A   -ca   a 


mirna_id: cfa-mir-211
hairpin:
-   -gccau     uug     U         CA     U    agggu 
 cug      gugac   ugggc UCCCUUUGU  UCCUU GCCU     u
 |||      |||||   ||||| |||||||||  ||||| ||||     c
 gac      cacug   acucg ggggaaacg  aggga cggg     u
c   acucuc     uug     u         ac     -    gagag 


mirna_id: cfa-mir-141
hairpin:
g    cucu   u       --    u        -   ugg  ua 
 ccgg    ggg ccaucuu  ccag acaguguu gga   uc  g
 ||||    ||| |||||||  |||| |||||||| |||   ||  u
 ggcc    ccc GGUAGAA  GGUC UGUCACAA ccu   ag  c
g    ----   -       AU    -        u   cga  ca 


mirna_id: cfa-mir-514
hairpin:
---------g   c      -     a   g       u   a 
          uac cuacuc cagag gug caaucau ugu a
          ||| |||||| ||||| ||| ||||||| |||  
          aug GGUGAG GUCUC CAC GUUAGUg aua u
acaguacgua   A      U     -   A       u   u 


mirna_id: cfa-mir-95
hairpin:
a   c     ac            uu         gaga 
 aca agugg  gcucaauaaaug  uguugaauu    u
 ||| |||||  ||||||||||||  |||||||||    g
 ugu ucacc  CGAGUUAUUUAU  GCAACUUaa    c
g   c     cA            GG         auua 


mirna_id: cfa-mir-105b
hairpin:
ugu         U  A          UCC  G    c   u 
   gcaucaugg CA AUGCUCAGAC   UU gugg ugc u
   ||||||||| || ||||||||||   || |||| |||  
   ugugguauc gu uacgaguuug   aa uacc acg a
auc         -  g          --u  g    -   u 


mirna_id: cfa-mir-188
hairpin:
u    -  uc   ca  UC         GU      -Ugag u 
 gcuc cc  ucu  CA  CCUUGCAUG  GGAGGG     c u
 |||| ||  |||  ||  |||||||||  ||||||     | u
 cgag gg  agg  gu  gggacguac  ccuccc     g u
c    u  -u   ac  uu         ac      caaaa u 


mirna_id: cfa-mir-134
hairpin:
c     gU        U  -A   G    Gca   a 
 agggu  GUGACUGG UG  CCA AGGG   agc c
 |||||  |||||||| ||  ||| ||||   ||| u
 uccca  cacugauc ac  ggu uccc   uug c
c     ac        c  cg   g    -ac   u 


mirna_id: cfa-mir-149
hairpin:
gccggc    g   U U G      G     A     gugug 
      gccc ggc C G CUCCGU UCUUC CUCCC     u
      |||| ||| | | |||||| ||||| |||||     c
      cggg ucg g c ggggca ggagg gaggg     c
---cga    g   u u g      g     -     aggag 


mirna_id: cfa-mir-299
hairpin:
     a                      uu 
aagaa UGGUUUACCGUCCCACAUACAU  u
||||| ||||||||||||||||||||||  g
uucuu gccaaauggcaggguguaugua  a
     c                      ug 


mirna_id: cfa-mir-362
hairpin:
---------           ACC        -A Ug  a 
         gAAUCCUUGGA   UAGGUGUG  G  cu u
         |||||||||||   ||||||||  |  || u
         cuuaggaacuu   auccacac  c  gg u
ucggagaaa           ---        aa gu  c 


mirna_id: cfa-mir-376b
hairpin:
agucuuuc         u    g      a     u     u   - guga 
        uuugguauu aaaa guggau uuccu cuaug uua c    u
        ||||||||| |||| |||||| ||||| ||||| ||| |     
        aaacuauga uuUU UACCUA AAGGA GAUAC Aau g    u
---gucgu         c    G      A     -     U   a auac 


mirna_id: cfa-mir-376c
hairpin:
u        u    g     UA     U         uguua 
 uugguauu aaaa GUGGA  UUCCU CUAUGUUUA     u
 |||||||| |||| |||||  ||||| |||||||||     u
 aacuauga uuuu caccu  aagga gauacaaau     u
a        c    g     ua     -         uggua 


mirna_id: cfa-mir-370
hairpin:
       g         ca gu   u    u   a  g 
agacaga aggccaggu  c  cuc gcag uac ca c
||||||| |||||||||  |  ||| |||| ||| || u
ucugucu ucUGGUCCA  G  GGG CGUC Gug gu c
       g         AG UG   U    C   a  a 


mirna_id: cfa-mir-377
hairpin:
uu              C   -    A    - uuu 
  gagcAGAGGUUGCC UUG GUGA UUCg c   a
  |||||||||||||| ||| |||| |||| |   u
  uuuguuuucaacgg aac cacu aagu g   u
-g              a   a    -    u uau 


mirna_id: cfa-mir-381
hairpin:
      a  c   g        u        --g   u 
uacuua ag gag uugcccuu guauauuc   guu a
|||||| || ||| |||||||| ||||||||   |||  
augagU UC CUC AACGGGAA CAUAUaag   cag u
      G  U   G        -        aua   u 


mirna_id: cfa-mir-340
hairpin:
uu     u au   aU       -CAA      U    g     ug 
  guacc g  gcg  UAUAAAG    UGAGAC GAUU ucaug  u
  ||||| |  |||  |||||||    |||||| |||| |||||  c
  caugg c  ugc  auauuuc    acucug cuag ggugu  g
-c     u cg   cg       auug      c    -     ug 


mirna_id: cfa-mir-330
hairpin:
cuuu    auca           --    -    U   AG    ugcaa 
    ggcg    cugccUCUCUG  GGCC UGUG CUU  GCuc     g
    ||||    |||||||||||  |||| |||| |||  ||||     a
    ucgc    gacggagagac  ccgg acac gaa  cgag     u
---c    ----           gu    c    -   -a    ccaac 


mirna_id: cfa-mir-326
hairpin:
----       g            c       uugu  a    gg g u 
    ucugucu uugggcuggagg agggccu    ga ggcg  u g g
    ||||||| |||||||||||| |||||||    || ||||  | |  
    aggcgga gacccGACCUCC UCCCGGG    CU CCgc  g c a
acuu       -            U       ---U  -    ua g u 


mirna_id: cfa-mir-324
hairpin:
---C   U       -      ---   -    ag u 
    GCA CCCCUAG GGCAUU   GGU GUgg  c g
    ||| ||||||| ||||||   ||| ||||  |  
    ugu ggggguc ucgugg   ccg cacc  g g
cuga   u       g      acc   u    ca a 


mirna_id: cfa-mir-325
hairpin:
--------------           CC   U                Uu gug 
              agugcuugguu  UAG AGGUGUUCAGUAAGUG  u   a
              |||||||||||  ||| ||||||||||||||||  |    
              ucacgaacuaa  auc uccacgaguuauuugc  a   c
ggucucggaucgug           cu   c                uu aua 


mirna_id: cfa-mir-346
hairpin:
-g u      ggu     u    CU    -  AUG           g u 
  g cucugu   gggcg cUGU  GCCC GC   CCUGCCUCUuu u g
  | ||||||   ||||| ||||  |||| ||   ||||||||||| | c
  c gagacg   uccgu gacg  cggg cg   ggacggaggaa g u
gg -      -gg     c    uc    u  --g           g c 


mirna_id: cfa-mir-329b
hairpin:
     cu           uu ug   uuc      u  aa 
gguac  gaagagagguu  c  ggu   uguuuc uu  u
|||||  |||||||||||  |  |||   |||||| ||   
cuaug  cuUUUCUCCAA  G  CCA   ACAAag ag  g
     ac           UU GU   --C      u  ga 


mirna_id: cfa-mir-452
hairpin:
  u          AAC G        G  A       cuu   a 
gc aagcacuuac   U UUUGCAGA GA ACUGAga   ugu a
|| ||||||||||   | |||||||| || |||||||   |||  
cg uucgugaaug   a aaacgucu cu ugacucu   aca c
  u          --a g        a  c       ---   u 


mirna_id: cfa-mir-483
hairpin:
-------            aaa      c   - uu  a 
       gaggacgggagg   ggagga gug g  uc u
       ||||||||||||   |||||| ||| |  || g
       cUUCUGCCCUCC   CCUCCU CAC c  gg c
ccuucuc            ---      -   U cu  a 


mirna_id: cfa-mir-488
hairpin:
    a  a   cu  C   U      A  C        g u 
gaga uc ucu  CC AGA AAUGGC CU UCAAacaa u u
|||| || |||  || ||| |||||| || |||||||| | u
cucu ag aga  gg ucu uuaucg ga aguuuguu a c
    c  a   cu  u   -      -  a        g a 


mirna_id: cfa-mir-432
hairpin:
ugacuccu     U U     UA       G     a   uua  uu 
        ccagg C UGGAG  GGUCAUU GGUGG ucc   au  c
        ||||| | |||||  ||||||| ||||| |||   ||   
        gguuc g accuc  ucgguag ucacc ggg   ua  c
------gc     u u     -c       g     -   -ug  uc 


mirna_id: cfa-mir-496
hairpin:
---------aguca      u   u        u     gu         uua 
              gguacu gaa ggagguug ccaug  guguucauu   u
              |||||| ||| |||||||| |||||  |||||||||    
              ucauga cuu cCUCUAAC GGUAC  UAUGAGUag   u
ggguucuucuuaaa      -   u        C     AU         uau 


mirna_id: cfa-mir-504
hairpin:
   -g    -            G     A    -A  u   u 
gcu  cugu ugggAGACCCUG UCUGC CUCU  UC gua g
|||  |||| |||||||||||| ||||| ||||  || |||  
cgg  gaca acccuuugggac ggacg gagg  ag cau c
   ga    u            g     c    ga  u   u 


mirna_id: cfa-mir-505
hairpin:
-------   u           G    A        ucug 
       cag ggGGGAGCCAG AAGU UUGAUGUu    c
       ||| ||||||||||| |||| ||||||||    c
       guc cuccuuugguc uuca aacugcga    a
cuacgag   u           g    c        uuug 


mirna_id: cfa-mir-539
hairpin:
    ug          A      G    ----     ug 
uacu  aGGAGAAAUU UCCUUG UGUG    Uucgc  u
||||  |||||||||| |||||| ||||    |||||  g
auga  uuuucuuuaa aggaac auac    gagug  u
    gu          c      -    uaag     uu 


mirna_id: cfa-mir-544
hairpin:
auuuu      cua    u           -     u   gauuu 
     caucac   ggga cuuguuaaaag gcaga ucu     a
     ||||||   |||| ||||||||||| ||||| |||     g
     guagug   ccCU GAACGAUUUUU CGUCU Aga     g
--auc      -aa    U           A     U   accag 


mirna_id: cfa-mir-545
hairpin:
cccag    ------g   a         - U A          AUUG     auaaa 
     ccug       cac uuaguaggc c C GUAAAUGUUU    GAUGa     u
     ||||       ||| ||||||||| | | ||||||||||    |||||     g
     ggac       gug aaucguccg g g uauuuacaaa    cuacu     a
-----    accucua   g         u u c          -caa     cagua 


mirna_id: cfa-mir-551a
hairpin:
ggggacug    - ug   c        c         aag    - u ug 
        ccag g  acc uggaaauc agagugggu   gccu g c  a
        |||| |  ||| |||||||| |||||||||   |||| | |  u
        gguc c  ugg ACCUUUGG UCUCACCCA   CGga c g  u
-------a    c gu   u        U         --G    u u ug 


mirna_id: cfa-mir-551b
hairpin:
gugc    c     ca                 - -aga    g g 
    ucuc uggcc  ugaaaucaagugugggu g    ccug u c
    |||| |||||  ||||||||||||||||| |    |||| |  
    agag gucgg  ACUUUGGUUCAUACCCA C    gggc a a
--ua    c     aG                 G Ggaa    g c 


mirna_id: cfa-mir-568
hairpin:
-    a      u        A         ACuucc         c 
 auac cuauau AUGUAUAA UGUAUACAC      uauauauau c
 |||| |||||| |||||||| |||||||||      |||||||||  
 ugug gauaug uacauauu auauaugug      auauauaua a
g    -      -        -         ------         u 


mirna_id: cfa-mir-578
hairpin:
----  --             U      G    G  u 
    cc  aaguagCUUCUUG GCUCUA AUUG Ug u
    ||  ||||||||||||| |||||| |||| || u
    gg  uucguugaagaac ugaggu ugau ac u
cuag  au             -      g    -  u 


mirna_id: cfa-mir-582
hairpin:
-----         uUA            CA     Uaaucu 
     acucuuugg   CAGUUGUUCAAC  GUUAC      a
     |||||||||   ||||||||||||  |||||       
     ugggaaacc   gucaacaaguug  caaug      g
aaacg         caa            ac     uuaauc 


mirna_id: cfa-mir-589
hairpin:
-g  -   G   -   -A      A  A    u   u 
  gc ucU AGA ACC  UGUCUG UC GAGc ggg a
  || ||| ||| |||  |||||| || |||| ||| c
  cg aga ucu ugg  acagac ag cuug ucc u
ga  c   a   c   cc      a  a    -   g 


mirna_id: cfa-mir-592
hairpin:
u   --a     c     cA        A    C       -     g 
 gau   uuaug cauga  UUGUGUCA UAUG GAUGAUG Ugugu a
 |||   ||||| |||||  |||||||| |||| ||||||| |||||  
 cua   aaugc guacu  aacgcagu gugc cuacugc acacg u
a   cag     a     ac        g    a       g     g 


mirna_id: cfa-mir-599
hairpin:
aaagaccugcu     -ca   u                 gg     -   u 
           gucca   gug guuugauaagcugacau  gacag gga u
           |||||   ||| |||||||||||||||||  ||||| ||| c
           uaggu   uac CAAACUAUUUGACUGUG  UUGuc cuu u
--------cag     cca   c                 --     a   u 


mirna_id: cfa-mir-615
hairpin:
ucgggag   c          UC     A      u u    g ug 
       ggg gggagGGGGG  CCCGG GCUCGG c cgag g  c
       ||| ||||||||||  ||||| |||||| | |||| |  u
       ccc cccucucccu  gggcc cgagcc g gcuu u  u
-------   -          cu     -      u -    g ua 


mirna_id: cfa-mir-631
hairpin:
--------cc  -   -     -A   C       c  a 
          GA CCU GGCCC  GAC UCAGCcc au g
          || ||| |||||  ||| ||||||| || c
          cu gga ccggg  cug agucggg ua u
accugcuccc  c   a     ga   -       -  g 


mirna_id: cfa-mir-632
hairpin:
c   uc       ---a   -   g       -    g  g    cgag   g 
 gcc  cggccgc    gug ccu acgggag caga cg cgaa    ggc u
 |||  |||||||    ||| ||| ||||||| |||| || ||||    |||  
 cgg  gccggug    cgc GGG UGUCCUU GUCU GU Guuu    ccg c
-   uu       cugg   A   -       U    -  -    --ua   g 


mirna_id: cfa-mir-653
hairpin:
------      cuu              U     U     ca  cu 
      ucauuc   caGUGUUGAAACAA CUCUA UGaac  gg  c
      ||||||   |||||||||||||| ||||| |||||  ||  c
      aguaag   guuauaacuuuguu gaggu acuug  cc  a
uagaau      aac              u     c     aa  aa 


mirna_id: cfa-mir-758
hairpin:
cu      a    --a    u      aga   c   - uuu 
  ggguac ugag   uggu gaccag   gca acg c   a
  |||||| ||||   |||| ||||||   ||| ||| |   u
  ucuaug acuc   AUCA CUGGUC   UGU Ugc g   u
--      -    CCA    C      CAG   U   c ugu 


mirna_id: cfa-mir-671
hairpin:
cagg      a   a      ga           -u   g 
    aagagg gga gcccug  ggggcuggagg  gau g
    |||||| ||| ||||||  |||||||||||  |||  
    uucuCC CCU CGGGAC  UCUUGGCCUcc  uug a
----      A   -      --           uu   u 


mirna_id: cfa-mir-454
hairpin:
-          ---         ----   --u     g 
 agaacccuau   cgauauugu    cuc   gcugu u
 ||||||||||   |||||||||    |||   |||||  
 uuuuGGGAUA   GUUAUAACG    gag   cgaua a
g          UUC         UGAU   ucu     a 


mirna_id: cfa-mir-802
hairpin:
-uu      u       C   A          A       -  cc 
   cuauua uuguacu AGU ACAAAGAUUC UCCUUGU gu  g
   |||||| ||||||| ||| |||||||||| ||||||| ||  u
   gauaau aauguga uca uguuucuaag aggaaca cg  c
guc      u       u   c          -       a  aa 


mirna_id: cfa-mir-300
hairpin:
   a    A      G  A     C       ug aug 
gcu cUUG AGAGAG UU UCCUU GUguguu  u   a
||| |||| |||||| || ||||| |||||||  |   u
cga gagc ucucuc aa aggaa cguauaa  a   u
   g    c      g  c     -       gu aug 


mirna_id: cfa-mir-875
hairpin:
-----    u  UAU        U  A       uucu 
     gugg ac   ACCUCAGU UU UCAGGUG    u
     |||| ||   |||||||| || |||||||    u
     cacu ug   uggaguca aa gguccac    a
caagu    u  ugu        u  a       uaaa 


mirna_id: cfa-mir-885
hairpin:
--   c     c           A  -         cu 
  ccg gcucu UCCAUUACACU CC CUGCCUCUu  c
  ||| ||||| ||||||||||| || |||||||||   
  ggc cgaga aggugaugugg gg gacggagag  c
ug   a     u           -  c         ua 


mirna_id: cfa-mir-665
hairpin:
-uc    -------     c       --ac     gc 
   ccgc       ggccu agccucc    ccggg  u
   ||||       ||||| |||||||    |||||   
   ggcg       CCGGA UCGGAGG    ggccu  c
guc    gcacUCC     A       ACCA     gu 


mirna_id: cfa-mir-207
hairpin:
ca    -c      cu  g          -g      
  gggg  gagggg  gc gggggagcgg  gcgga 
  ||||  ||||||  || ||||||||||  |||| g
  ccCU  CUCCUC  UG CCUCUUCGcc  cgucg 
--    UC      UC  G          gg      


mirna_id: cfa-mir-761
hairpin:
uggcaag                       G  A  g 
       aggaggaGCAGCAGGGUGAAACU AC CA u
       ||||||||||||||||||||||| || ||  
       uccuccucgucguuucacuuuga ug gu u
-----ag                       g  -  c 


mirna_id: cfa-mir-764
hairpin:
-----------    ua  a     G   U    -  U        g  cu g 
           aauc  gg ggcaG UGC CACU UG CCUCCUcc ug  u g
           ||||  || ||||| ||| |||| || |||||||| ||  | a
           uuag  cc cuguc acg guga ac ggaggagg ac  a a
gguugcuuuag    ua  a     a   -    u  c        g  au a 


mirna_id: cfa-mir-759
hairpin:
ggauuau             cc     u   AG          ----AU      
       aauaaauuaaaug  uaaac gGC  AGUGCAAACA      UUUGC 
       |||||||||||||  ||||| |||  ||||||||||      |||| C
       uuguuuaauuuac  auuug ucg  ucacguuugu      agacu 
-------             aa     -   -g          aaaucu      


mirna_id: cfa-mir-718
hairpin:
-------      g -      caa  u  c      - c 
       gcggcg c ggcggg   ga gg ggcggg c c
       |||||| | ||||||   || || |||||| |  
       cGCCGC G CCGCCC   CU Cc ccgccc g g
cggagca      G G      CGC  U  -      c g 


mirna_id: cfa-mir-872
hairpin:
u              -GUGU   C   A   uucau 
 uguuagAAGGUUAU     UAG UCA Ggc     u
 ||||||||||||||     ||| ||| |||     a
 gcaaucuuccgaug     auc agu ccg     u
g              aaguu   c   -   uccuu 


mirna_id: bta-mir-489
hairpin:
gu     c     g            gc c   cua       
  ggcag uuggu gucguaugugug  g cau   cuggaa 
  ||||| ||||| ||||||||||||  | |||   ||||| c
  ucguc aauCA CGGUAUAUACAC  C GUG   gauuug 
--     a     G            UA A   -ag       


mirna_id: bta-mir-1224
hairpin:
G      CUC         A   --u   --    --c   g  c 
 UGAGGA   GGGAGGUGG Ggg   ggc  gcug   cag gc a
 ||||||   ||||||||| |||   |||  ||||   ||| ||  
 acuccu   uccuccacc ccc   ucg  cgac   guc cg g
g      cuc         c   ucu   cu    ucu   a  g 


mirna_id: bta-mir-376b
hairpin:
-uuc         u    g      a     u     u   - guga 
    uuugguauu aaaa guggau uuccu cuaug uua c    u
    ||||||||| |||| |||||| ||||| ||||| ||| |     
    aaacuauga uuUU UACCUA AAGGA GAUAC Aau g    u
ucgu         c    G      A     -     U   a auac 


mirna_id: bta-mir-376d
hairpin:
--     uu    g  a         u         cgg   u 
  gguau  aaaa gu gauuuuccu cuaugauua   guu g
  |||||  |||| || ||||||||| |||||||||   |||  
  cuaug  uuuU CA CUAAAAGGA GAUACUAau   uag g
aa     gc    A  C         -         ---   u 


mirna_id: bta-mir-376c
hairpin:
u        u    g     UA     U         uguua 
 uugguauu aaaa GUGGA  UUCCU CUAUGUUUA     u
 |||||||| |||| |||||  ||||| |||||||||     u
 aacuauga uuuu caccu  aagga gauacaaau     u
a        c    g     ua     -         uggug 


mirna_id: bta-mir-764
hairpin:
-----------    -    a gc  G   U  C  -GU        acg  ua 
           aauc uagu g  aG UGC CA UC   CCUUCUcc   gu  a
           |||| |||| |  || ||| || ||   ||||||||   ||  a
           uuag auca c  uc acg gu ag   ggaggagg   ca  a
gguuucuuuug    u    - ua  a   -  a  acc        -ga  ua 


mirna_id: bta-mir-1225
hairpin:
g    ua    c      gggagagggacgcacccugggcccagc 
 uggg  cggc cagggg                           a
 ||||  |||| ||||||                           g
 ACCC  GCCG GUCCCC                           a
G    CC    U      GAGCCagucaggccgacgcgggacccg 


mirna_id: bta-mir-584-8
hairpin:
---ag  ug  ca             GCC   G    --   g    a 
     ga  gc  agcauucUGGUUU   UGG ACUG  AGu ccug g
     ||  ||  |||||||||||||   ||| ||||  ||| |||| g
     uu  ug  uuguaggauuaga   acc ugac  uca gggc u
cgucg  gu  --             ---   g    gu   -    a 


mirna_id: bta-mir-29e
hairpin:
         -          c      g  u    uuuucc 
cuucuggaa gcugguuuca auggug cu agau      a
||||||||| |||||||||| |||||| || ||||       
gaggauUUU UGACUAAAGU UACUAC GA Ucua      u
         G          U      -  -    uguuuc 


mirna_id: bta-mir-1282
hairpin:
ccuucu   CG          UC       ----   g   g     cgag   c 
      ucU  UUUGCCUUUU  UGCUUcu    gcu cau aucuc    ucc u
      |||  ||||||||||  |||||||    ||| ||| |||||    |||  
      agg  aaacgggaga  auggagg    cgg gua uagag    ggg a
-----c   aa          cc       guca   g   g     --au   g 


mirna_id: bta-mir-1284
hairpin:
--a   ug    ---         uuuaau    UCUGC      C U  C     uuaaauu 
   uuu  auau   auaaaccag      guuu     ACAGAC C GG UUUUC       u
   |||  ||||   |||||||||      ||||     |||||| | || |||||        
   aaa  uaua   uguuugguc      cagg     uguuug g cc aaagg       u
cua   gu    cuu         ---uuc    --uua      u c  c     uuauaua 


mirna_id: bta-mir-376a
hairpin:
aauccuuc         u    g  a    c    u      guac   au 
        uuugguauu aaaa gu gauu uccu cuauga    auu  u
        ||||||||| |||| || |||| |||| ||||||    |||   
        aaacuauga uuuU CA CUAA AGGA GAUACU    uag  u
---gucgu         c    G  C    A    -      -Aau   ca 


mirna_id: bta-mir-1291
hairpin:
-----------------U    -   AC   A    U       c 
                  GGCC CUG  UGA GACC GCAGUua a
                  |||| |||  ||| |||| ||||||| c
                  ccgg gac  acu uugg cgucgau u
guccuucugucacgagac    a   aa   -    u       a 


mirna_id: bta-mir-1179
hairpin:
---  c      -   a   --         C        Gu uaug 
   gg cagaag gga gAA  GCAUUCUUU AUUGGUUG  g    u
   || |||||| ||| |||  ||||||||| ||||||||  |     
   uc gucuuu ccu uuu  cguaggaga uaaccaac  u    u
cga  a      u   a   ac         c        ug uccg 


mirna_id: bta-mir-1301
hairpin:
--  gu    g gg       -     -c c      -  g 
  gg  ugug g  gucacuc uaggc  c gcagca cu u
  ||  |||| |  ||||||| |||||  | |||||| || g
  cc  acac C  UAGUGAG AUCCG  G CGUUgu gg c
cu  ug    a UU       G     UC A      a  u 


mirna_id: bta-mir-7-2
hairpin:
---    u  -      a  u        A     A       U      --     a 
   ugga gu uggucu gu cugugUGG AGACU GUGAUUU GUUGUU  uuuag u
   |||| || |||||| || |||||||| ||||| ||||||| ||||||  |||||  
   aucu cg accgga ca gguauacc ucuga cacuaaa caacag  aaguc a
gac    c  u      -  c        g     -       -      cu     a 


mirna_id: bta-mir-1256
hairpin:
a   a       cuuugaagcuuugaagucAGGCAUUGAC 
 guc gccugug                            U
 ||| |||||||                            U
 uag uggauac                            C
-   a       agauggauuccugaaauuaUAGAUCUCU 


mirna_id: bta-mir-1835
hairpin:
--U   C  --------U    G UG     G  c 
   GCA CC         GAGA C  GGGCU gu u
   ||| ||         |||| |  ||||| || c
   cgu gg         cucu g  uccgg ua c
ggc   c  ugucuaaau    g gu     g  u 


mirna_id: bta-mir-1281
hairpin:
---a     cacc            gugu 
    ggggg    gggaggagguga    c
    |||||    ||||||||||||     
    cCCCU    UCCUCCUCCGCU    u
uucg     ---C            guuc 


mirna_id: bta-mir-1251
hairpin:
-----  gg  U  A    CCA         --c  c 
     gu  AC CU GCUG   AAGGCGCUu   uc u
     ||  || || ||||   |||||||||   || u
     ca  ug ga cgac   uuucgcgag   ag c
cggua  ga  u  c    ucg         cca  u 


mirna_id: bta-mir-1296
hairpin:
ccua    a           C CU        CU   u     a 
    ccua cugggUUAGGG C  GGCUCCAU  CCu uagga a
    |||| ||||||||||| |  ||||||||  ||| ||||| a
    gggu gauccaauccc g  ucggggug  ggg gucuu c
uguc    c           a uu        ag   u     c 


mirna_id: bta-mir-1193
hairpin:
ccagccgcucucca    a    a g       -    c      g    cu  au 
              gggu gcug g ggauggu aggc ggugac ugca  uc  u
              |||| |||| | ||||||| |||| |||||| ||||  ||   
              ccca cgac c cCUAUCA UUUG CCACUG AUgu  ag  u
----gucuaccuga    -    - a       G    C      G    --  ca 


mirna_id: bta-mir-1197
hairpin:
-----cuucc       -u     cgc   u       gug g    - uuu 
          ugguauu  gaaga   ggu gaccaug   u uacg c   a
          |||||||  |||||   ||| |||||||   | |||| |   u
          acuauag  cuUCU   UCA CUGGUAC   G AUgc g   u
ccgcuucuac       cu     ---   U       ACA G    a uau 


mirna_id: bta-mir-7-1
hairpin:
-    agca      c    c   A     A U     U       ucuc 
 gugg    gccagc ccau UGG AGACU G GAUUU GUUGUUg    c
 ||||    |||||| |||| ||| ||||| | ||||| |||||||    u
 cgcc    cggucg ggua gcc ucuga c cugaa caacaac    g
a    --ac      u    c   g     c -     -       ucgc 


mirna_id: bta-mir-1839
hairpin:
--aaugaaAA        GAAC     U  UUug a 
          GGUAGAUA    AGGUC UG    c a
          ||||||||    ||||| ||    | a
          ccaucuau    uccag ac    g a
guaacgacaa        -aca     u  uuaa u 


mirna_id: bta-mir-1307
hairpin:
--     a   u    ---    ---  -a   --cc        c a   u       -a  u  a   gc   ucuaua 
  cauca gag cggc   ugag   uc  cug    acugccua c auc cgaccgg  cc cg ccg  ucg      u
  ||||| ||| ||||   ||||   ||  |||    |||||||| | ||| |||||||  || || |||  |||       
  guggu cuc guug   acuu   ag  gac    uggcggau g ugG GCUGGCU  GG GC GGC  Agc      u
ca     -   -    uga    uug  ca   auac        a a   U       GC  U  -   UC   uaaccg 


mirna_id: bta-mir-1298
hairpin:
--aga        u         U    C             ------       cc 
     ugagaagu aagagUUCA UCGG UGUCCAGAUGUAu      ccaagua  c
     |||||||| ||||||||| |||| |||||||||||||      |||||||   
     gcuuuucg uuuucaagu aguc acgggucuacaua      gguuuau  u
cucag        u         u    a             aauaac       ag 


mirna_id: bta-mir-1287
hairpin:
--------     ----   --u   cagg       UCA       ---   UC 
        gcucu    gcu   ucc    UGCUGGA   GUGGUUU   GAG  u
        |||||    |||   |||    |||||||   |||||||   |||  g
        cgagg    uga   agg    acgaucu   caccgaa   cuc  a
aacaguau     uuag   cgc   --ca       ---       aau   cg 


mirna_id: bta-mir-1248-1
hairpin:
--------uuuAC        A   GC   G     ---AA               a 
             CUUCUUGU UAA  ACU UGCUA     auuacagaaaccaag u
             |||||||| |||  ||| |||||     ||||||||||||||| a
             gaagaaca auu  uga acgau     uaauguuuuugguuc g
acgucaaggagaa        c   -a   g     cguaa               c 


mirna_id: bta-mir-1185
hairpin:
u       u    -     GA A              a  uua 
 uugguac ugaa gAGAG  U CCCUUUGUAUGUUc cu   u
 ||||||| |||| |||||  | |||||||||||||| ||    
 aacuaug guuu uucuc  a gggagacauauaag gg   u
a       c    a     ag -              c  uaa 


mirna_id: bta-mir-1271
hairpin:
-ca  -   au             C     A          ua 
   cc cag  cagugCUUGGCAC UAGUA GUACUCAgua  u
   || |||  ||||||||||||| ||||| ||||||||||   
   gg guc  guuacggaccgug aucgu cgugaguugu  a
ucg  a   gu             u     c          uc 


mirna_id: bta-mir-1249
hairpin:
---g         a  a  u    cac     cuc 
    ggaggaggg gg ga gggc   guucc   u
    ||||||||| || || ||||   |||||    
    CUUCUUCCC CC CU CCCG   CAagg   g
uccA         -  C  U    ---     ucc 


mirna_id: bta-mir-1248-2
hairpin:
--------uauAC        A   GC   G     ---AA               a 
             CUUCUUGU UAA  ACU UGCUA     auuacagaaaccaag u
             |||||||| |||  ||| |||||     ||||||||||||||| a
             gaagaaca auu  uga acgau     uaauguuuuugguuc g
acgucaaggagaa        c   -a   g     cguaa               c 


mirna_id: bta-mir-181a-1
hairpin:
---u   cucc a     -  uc  u A   U      CU       A    g  auu 
    gag    g gguug cu  ag g ACA UCAACG  GUCGGUG GUUu ga   a
    |||    | ||||| ||  || | ||| ||||||  ||||||| |||| ||    
    cuc    c ccaac gg  uc c ugu aguugc  cagcuac caaa cu   a
ccac   -uac a     c  ua  c a   u      --       -    a  aaa 


mirna_id: bta-mir-181b-1
hairpin:
cuugggcagagguucuuucuuaaaa       aucAA         CUG          gaa  g 
                         ggucaca     CAUUCAUUG   UCGGUGGGUU   cu u
                         |||||||     |||||||||   ||||||||||   ||  
                         ccggugu     gugaguaac   agucacucga   gg g
-------------------uacgcc       -caac         --a          aca  u 


mirna_id: hsa-mir-2052
hairpin:
c          A -A     GUcccuu 
 UGUUUUGAUA C  GUAAU       u
 |||||||||| |  |||||        
 acaaaacuau g  cauug       a
a          c ac     aaacuug 


mirna_id: hsa-mir-2053
hairpin:
     c         c  a               -caacc   ga 
cuugc auguaaaua ag uuuaauuaacauuug      ugu  a
||||| ||||||||| || |||||||||||||||      |||   
gaacg uaCAUUUAU UC AAAUUAAUUGUGaau      acg  g
     a         C  C               uucaaa   ua 


mirna_id: hsa-mir-2054
hairpin:
          -AA      UUAUU 
CUGUAAUAUA   UUUAAU     c
||||||||||   ||||||      
gacauuaugu   aaauua     u
          aaa      cuauc 


mirna_id: osa-MIR2055
hairpin:
      u    g    ag          cacagacauugacacgcaauu 
agaaga ggag cacc  cccaaggaaa                     c
|||||| |||| ||||  ||||||||||                     a
ucuucu CUUU GUGG  GGGUUCCUUU                     a
      -    G    AA          uucauccugcguuagaagagg 


mirna_id: osa-MIR827a
hairpin:
-u       c               c     aug  u    -auug   aauaauuga    gc 
  uuuguug uggucaucuagcuac cgugc   cc ggag     gag         cgau  a
  ||||||| ||||||||||||||| |||||   || ||||     |||         ||||   
  AAACGAC ACCAGUAGAUUggug gcacg   gg ucuc     uuc         gcug  g
AC       U               c     ---  u    gguua   --------g    ac 


mirna_id: bfl-mir-2056
hairpin:
acagacgacu     u      u               g  aca 
          ugggc caggua gucugcggugaggcu gu   a
          ||||| |||||| ||||||||||||||| ||    
          acucG GUCCAU UAGAUGUCACUUUgg cg   c
--------gc     C      C               a  gcu 


mirna_id: bfl-mir-2057
hairpin:
-----------c     U             A        cug  a 
            acggg GAGAAGUUAGCCA CCAUCCGG   gu u
            ||||| ||||||||||||| ||||||||   ||  
            ugcuc uucuucaguuggu ggugggcc   cg g
auaacucugcau     u             -        caa  u 


mirna_id: bfl-mir-2058
hairpin:
-------------  g   U             A        U   u 
             gc aag GAGAAGUAAGACU CCAUCCCG gug g
             || ||| ||||||||||||| |||||||| ||| c
             cg uUC UUCUUCGUUCUGG GGUGGGgc cau u
cacaacauuuggg  a   U             -        -   g 


mirna_id: bfl-mir-2059
hairpin:
cauuuguguuggacc              UU C          u  a 
               ccuuuCAAGGCAAA  G UGCAAUACUu gu u
               ||||||||||||||  | |||||||||| || c
               ggaaAGUUUCGUUU  U ACGUUAUgaa cg c
--------------u              UU C          -  u 


mirna_id: bfl-mir-2060
hairpin:
-      uucagaacaaa        g   u      g   g  ug 
 auagug           ggacaugu ugu cccugu ugu ga  g
 ||||||           |||||||| ||| |||||| ||| ||   
 ugucac           UUUGUGUA ACA GGGACG ACG cu  u
g      ---------CA        G   -      -   a  ug 


mirna_id: bfl-mir-2061
hairpin:
cccugguggu       -  g           gc      c   aa 
          uuuccac gg caauguaucua  gcaaca guu  c
          ||||||| || |||||||||||  |||||| |||   
          gagggUG CU GUUACAUGGAU  CGUUgu cga  c
---------c       A  G           -A      -   gc 


mirna_id: bfl-mir-2062
hairpin:
-----------   g  c      A               ugaac 
           ccu cu UGCAAC AUAUUUCAUCAGUGG     u
           ||| || |||||| |||||||||||||||     c
           gga gA GCGUUG UGUAAAGUGGUCAuc     c
ugucaccggcc   g  U      A               uaaaa 


mirna_id: bfl-mir-2063
hairpin:
aggcu           a     -a   u        ggua    ac 
     cacuuucaaaa gcaaa  agu gcaauauc    uacg  g
     ||||||||||| |||||  ||| ||||||||    ||||   
     gugaaAGUUUU CGUUU  UCA CGUUAUag    augc  u
-----           -     AA   -        ----    au 


mirna_id: bfl-mir-2064
hairpin:
cauucagccaccuu   --           u      gu      agc 
              guc  cacgguugcau guguug  cuuugu   g
              |||  ||||||||||| ||||||  ||||||   u
              uag  GUGUCAACGUG CACGAC  GAAaca   g
-------------g   aU           U      --      agu 


mirna_id: bfl-mir-2013
hairpin:
uuugc      -           -  u    c   ucugu    u 
     cccuga gccauugcauu ug cugc uug     gcau g
     |||||| ||||||||||| || |||| |||     ||||  
     gggACU UGGUAACGUGA AC GACG aac     ugua a
---cu      G           U  -    A   ----c    g 


mirna_id: bfl-mir-135a-1
hairpin:
-------------  g    A           CU          uau 
             gu uucU UGGCUUUCAUC  AUGUGAAugu   c
             || |||| |||||||||||  ||||||||||    
             ca aaga acugaaggugg  uacacuugua   g
ucaaaggugugug  g    a           -u          cac 


mirna_id: bfl-mir-2065
hairpin:
--------------cuuaccUGGCAGAGA   C    U  U   gaa 
                             UGG ACGU GA cau   g
                             ||| |||| || |||   g
                             acc ugca cu gua   a
ccuugucuugcgaacaauucugucugcga   u    -  c   gga 


mirna_id: bfl-mir-2066
hairpin:
uggugccagcgcc   g  ug     uc       c    -  aau 
             ccu ac  cugca  cugcugc uugg gg   a
             ||| ||  |||||  ||||||| |||| ||    
             ggA UG  GACGU  GACGACG AAcc cc   u
----------gug   G  GU     GU       -    a  aac 


mirna_id: bfl-mir-2067
hairpin:
cccucauccaug     a         c       c    gaaccu 
            uuuca cuguugcau uugcugc uuua      u
            ||||| ||||||||| ||||||| ||||       
            aaaGU GGUAACGUA GACGACG AAau      c
----------ca     -         U       -    accuac 


mirna_id: bfl-mir-2068
hairpin:
--------------- u   uC             C       g aa 
               g ucu  UUCCUAUGCACAU UGUCCUU u  g
               | |||  ||||||||||||| ||||||| |  c
               c agA  AGGGAUACGUGUG ACAGGag a  u
gucuaaaccgaucga u   GA             U       g gg 


mirna_id: bfl-mir-2069
hairpin:
cccccgugaaaucuaaccugcgucugaaug             --c    guc 
                              aguccgcggcugc   ugcc   c
                              |||||||||||||   ||||    
                              UCAGGUGCCGACG   GCGG   g
------------------------gcauag             CCA    Aga 


mirna_id: bfl-mir-2070
hairpin:
-------------c   ugU         CUCUA        ggca  u 
              ggg   UUCCACAGC     CACAUGUg    ug c
              |||   |||||||||     ||||||||    ||  
              cCC   AGGGUGUCG     GUGUAcgc    ac c
auugccacaugucu   --U         AUUAC        ---g  a 


mirna_id: bfl-mir-2071
hairpin:
uccgcag  ug -auA            G      CCGUcc    g 
       gu  a    UGCGGUGCGGUG UAGCAA      cgac u
       ||  |    |||||||||||| ||||||      |||| a
       ca  u    ACGCCGCGCCAC AUUGUU      gcug a
-------  gu GAAA            -      -----A    a 


mirna_id: bfl-mir-2072
hairpin:
----------------     c   A     A     AC     a  c 
                ucuug UGC ACAUC CAGUG  CACAU gg c
                ||||| ||| ||||| |||||  ||||| ||  
                agaaU AUG UGUAG GUCAC  GUgua cu a
cacaccguaccggucu     U   G     C     GA     a  g 


mirna_id: bfl-mir-2073
hairpin:
uugu        G   C  C    C    u    --u  aaaa 
    uaGCCUGG UGC AU CUCC uggu agcu   gc    a
    |||||||| ||| || |||| |||| ||||   ||    g
    aucggacc aug ua gagg auca uugg   cg    a
----        a   c  a    u    -    cac  aguu 


mirna_id: bfl-mir-34b
hairpin:
uauugugcgcuacagA           C    U     -  gac 
                GGCAGUGAUGU AGUU GUUGU gu   a
                ||||||||||| |||| ||||| ||    
                CCGUCACUACA UCAA CAAca ca   c
------cgcaaagGAA           A    -     g  gag 


mirna_id: bfl-mir-2075
hairpin:
uug         ----ACC    -  -A      uga      ----   -    c 
   AUCUCGUCA       UUCG UC  GAUGuc   uacacu    gcu cuga u
   |||||||||       |||| ||  ||||||   ||||||    ||| ||||  
   uagggcggu       aagu ag  cugcag   guguga    cga ggcu u
--g         gaaaaca    g  ga      -ua      agag   a    u 


mirna_id: bfl-mir-2076
hairpin:
---------------  gu           AG         U  auu 
               ug  agAAUUGCACU  AGUGAUUUG Ug   u
               ||  |||||||||||  ||||||||| ||   u
               ac  UCUUGACGUGA  UCACUAAAC ac   u
cugaacauguucggc  uc           CU         u  agg 


mirna_id: bfl-let-7a-1
hairpin:
----- ug   U       UA           U  gaagua  a 
     c  agg GAGGUAG  GGUUGUAUAGU ca      ca c
     |  ||| |||||||  ||||||||||| ||      ||  
     g  uuu UUCCAUU  CCAACAUGUCA Gu      gu a
uacug gu   U       GC           -  --agag  u 


mirna_id: bfl-let-7b
hairpin:
guaugacccaaaaaa     ac        c   -  ucuccaau 
               aggua  ggguugua agu ca        g
               |||||  |||||||| ||| ||         
               UCCAU  UCCAACAU UCA gu        u
---------cuccAC     CA        A   A  cuucaugu 


mirna_id: bfl-mir-125b
hairpin:
guggagggcguauguca    gc    -a          c     --g c 
                 ccca  uccc  agauccuaac uguga   c a
                 ||||  ||||  |||||||||| |||||   |  
                 gggu  AGGG  UCUGGGAUUG ACACU   g u
----------------g    -a    AC          A     aca g 


mirna_id: bfl-mir-129a
hairpin:
cucuccccggcgugcc            U   UU         gaga  a 
                cuguCCUUUUUG GGU  GGGGCUUUU    ug u
                |||||||||||| |||  |||||||||    ||  
                gauagGGAAAAC CCA  UCCCGAAaa    ac g
----------------            U   -U         ---g  a 


mirna_id: bfl-mir-9-1
hairpin:
------------g      C               G    a a u u 
             uguugU UUUGGUUAUCUAGCU UAUG g g c u
             |||||| ||||||||||||||| |||| | | |  
             acaACA AAACCAAUGGAUCGA AUAc c c g u
aucccccuuacca      -               A    - a u u 


mirna_id: bfl-mir-9-2
hairpin:
--------------      C               G    a a u u 
              uguugU UUUGGUUAUCUAGCU UAUG g g c u
              |||||| ||||||||||||||| |||| | | |  
              acaACA AAACCAAUGGAUCGA AUAc c c g u
gaucccccuuacca      -               A    - a u u 


mirna_id: bfl-mir-92a-2
hairpin:
agaacauugcccuga           u        g       -  ac 
               caagaaggucg gauaggug caauguu gu  c
               ||||||||||| |||||||| ||||||| ||   
               guuUUUCCGGC CUGUUCAC GUUAUaa ca  c
--------------c           C        -       a  ca 


mirna_id: bfl-mir-92c
hairpin:
------------uag     a   a  ----    uuu        -----        -uaaaauuua     uuuguuuuu      a         g   aaa       uc 
               agggc ggg gg    gaau   gaagugau     uguguuug          gcggu         ggcggg aggucggga aag   caauguu  c
               ||||| ||| ||    ||||   ||||||||     ||||||||          |||||         |||||| ||||||||| |||   |||||||  a
               ucuug ccc cc    uuua   cuucacug     guacagac          cgccg         ucgucC UUCGGCCCU UUC   GUUAUag  a
cucuucuuugugacg     -   a  gaau    uuu        uuuca        cucguucuac     ---------      G         G   -AC       cc 


mirna_id: bfl-mir-33-1
hairpin:
-------------g     G        A            g g a 
              cugag UGCAUUGU GUUGCAUUGCAU u c c
              ||||| |||||||| |||||||||||| | | a
              gacuc acgugacg caauguaacgug a g a
guaacguugguaca     g        a            a g a 


mirna_id: bfl-mir-19
hairpin:
uucacgcaccgcagucaaa   u     c  aa    aa    --c    u 
                   gcu cuuug ga  ugaa  ugca   ucac c
                   ||| ||||| ||  ||||  ||||   ||||  
                   cga gAGAC CU  GUUU  ACGU   Ggug a
------------------c   -     -  AC    GG    UUU    a 


mirna_id: bfl-mir-219
hairpin:
----------c    -      U     AA    A      -  gac 
           cagu gcUGAU GUCCA  CGCA UUCUug uu   c
           |||| |||||| |||||  |||| |||||| ||    
           guua cgacua caggu  gcgu aagaac aa   u
cauccgucgca    a      -     -c    c      c  guu 


mirna_id: bfl-mir-705
hairpin:
-------gca    --GU      -     --U    Cccga   c 
          ugaG    GGGAGG UGGGG   GGUU     agu u
          ||||    |||||| |||||   ||||     |||  
          acuc    cccucu acucc   ccga     ucg g
cuggaacaag    auuc      g     uau    uacag   a 


mirna_id: ppt-MIR2077
hairpin:
uucgacgcugcuaucu              a                         a   u 
                ugaauggaaauaug cguguuuaugagcuuaguggcuggu guu c
                |||||||||||||| ||||||||||||||||||||||||| |||  
                acuuaCCUUUAUAC GCACAAAUACUcgaaucaccgacca caa c
agucaacucuaguugg              C                         a   a 


mirna_id: ppt-MIR2078
hairpin:
ggaggauuacugauauauucuagcacggcaagagagg    -a  c                              gggga   a  c      u 
                                     uggc  ag cucauguacaggcacaggcaagccaacccu     uca cu guucag u
                                     ||||  || ||||||||||||||||||||||||||||||     ||| || |||||| g
                                     gccg  uc gaguacaUGUCCGUGUCCGUUCGGUUGGga     agu ga cgaguc a
------------gcucagcuagggaucccaaauuaga    ag  a                              ----g   c  u      a 


mirna_id: ppt-MIR2079
hairpin:
auauaa     a  ua  ----                                         g 
      guacu au  au    uuaugcgucaucaacaucaacucuucauaguuauuauauaa u
      ||||| ||  ||    |||||||||||||||||||||||||||||||||||||||||  
      uauga ua  ua    aauACGCAGUAGUUGUAGUUGAGAaguaucaauaauauauu a
---uag     a  gc  caaa                                         c 


mirna_id: ppt-MIR2080
hairpin:
-------g         uguuaag g                                         uuu 
        cugcguguu       u agaaauUCCAUAUCAAUUCGCAGAUGCcgcuucagaacugg   u
        |||||||||       | |||||||||||||||||||||||||||||||||||||||||   a
        gaugugcag       g ucuuuaagguauaguuaagcgucuacggcgaagucuugacc   c
cgauuugg         ------- g                                         uug 


mirna_id: ppt-MIR2084
hairpin:
caguuacaagu    u    u    g           A   U          A    aac 
           aucu gaaa ucgu gaagcgCCUGC UUG UGGAUUGUGG cuac   g
           |||| |||| |||| ||||||||||| ||| |||||||||| ||||   g
           uaga cuuu agca cuucgcggacg agc accuaacacc gaug   a
--------uuu    -    c    a           a   u          c    agg 


mirna_id: ppt-MIR2085
hairpin:
--------aaa    -    g    u           uuc a               ucc 
           aucu gaaa ucgu gaagcgccugc   g uggauugugggcuac   u
           |||| |||| |||| |||||||||||   | |||||||||||||||   c
           uaga cuuu agca cuuCGCGGACG   C ACCUAACAccugaug   c
gucaauguuca    a    a    c           UAA A               uug 


mirna_id: ppt-MIR2081
hairpin:
----guuu   cagua   cagu                                  g    ag 
        gcc     cuc    gaucagacacauaacucuagcuauugggcagaca uguu  a
        |||     |||    |||||||||||||||||||||||||||||||||| ||||   
        ugg     gag    uUAGUCUGUGUAUUGAGAUCGAuaacccgucugu acag  g
aauuucug   ---ac   -aau                                  g    au 


mirna_id: ppt-MIR2082
hairpin:
-------     cca     ug   cu            UU             cg      a  uc  c 
       cucgu   caucu  ccg  ccagauUGUGUG  CCGCUUCUUCUUU  ucaugc ug  cu c
       |||||   |||||  |||  ||||||||||||  |||||||||||||  |||||| ||  ||  
       gagua   guaga  ggc  ggucuaacgcau  ggcgaagaagaag  aguacg ac  ga a
gagucuu     --c     --   ag            uc             au      a  ua  c 


mirna_id: ppt-MIR2083
hairpin:
aaaaguguguguaugcggaaguuggagaaaacccagacuucauugcucgaugaagcauguagcuucgcagucgua            C  C          u uc   cgcauugugguucuccaacaccugcacagcggcggucuuguccggauuagggaucgucuacaccagauaagccacg 
                                                                           cUUCUUGCACUC UC AUCUCUcgca c  uug                                                                            g
                                                                           |||||||||||| || |||||||||| |  |||                                                                            c
                                                                           GAAGAACGUGAG AG UAGAgagugu g  gac                                                                            g
--------------------------------------------------acgcagaccuuguaccuuucucccA            C  U          c uu   ccgucccaacauaggcuugcaccuuuugcgucguuggcaacaacuugguuuccuaccauaaaaagaggcucuuuuu 


mirna_id: ppt-MIR1023e
hairpin:
---ac     u aau     c  A      CU   U           aucguu     ccuc 
     agcuu g   gucau au CACUCU  CCG UUCCCUUCcga      uuucc    a
     ||||| |   ||||| || ||||||  ||| |||||||||||      |||||    u
     ucgaa c   uagua UA GUGAGG  GGC AAGGGAagguu      aaagg    g
cagcc     - guc     c  C      UG   U           ---guc     ucac 


mirna_id: mtr-MIR2086
hairpin:
--uuc    a                         c  ca      c   a 
     acca cuuuCCAGUUCUGCGUUCAUGUCCC ug  gcuuga uuu g
     |||| ||||||||||||||||||||||||| ||  |||||| |||  
     uggu gaAAGGUCAAGACGUAAGUACAGgg ac  cgagcu aag g
gaguc    a                         a  aa      a   g 


mirna_id: mtr-MIR1510b
hairpin:
   uc   uu      --   -   --   c  -       ------uug   cu    uu           c c      c  c   U    C  U        G    c  c     c      
aca  uag  agucau  acc gau  agg ga gagagau         cua  gcaa  guuguuuuacc g uccucc au CCA GGAU CC ACCAUGUG acuc au aucau agauc 
|||  |||  ||||||  ||| |||  ||| || |||||||         |||  ||||  ||||||||||| | |||||| || ||| |||| || |||||||| |||| || ||||| |||| c
ugu  guc  uuagua  ugg cua  ucc cu cucuuua         gau  cguu  caacaaaaugg c aggagg uA GGU CCUA GG UGGUACAc ugag ua uagug ucuaa 
   cu   -u      uu   a   cu   a  a       cuuaguaaa   uu    uu           a u      -  A   C    U  C        -    a  a     u      


mirna_id: mtr-MIR1507
hairpin:
    uaa  uccaa      ug      ag    -GU            AA  U     uuucuu       uc 
acca   ac     uuaaug  guguug  uAGA   UGUAUGGAACGA  GA gggaa      guugaau  u
||||   ||     ||||||  ||||||  ||||   ||||||||||||  || |||||      |||||||  a
uggu   ug     aauugu  cauaac  AUCU   ACAUACCUUGCU  cu cccuu      uaacuua  u
    uuc  uuaac      gu      cG    ACU            CC  -     -----u       cu 


mirna_id: mtr-MIR1510a
hairpin:
     ug   u      u     C     CAU      C    cauaaa        a  u    c  c      u    cca 
aaagu  cua ugcaau gUUGU UUACC   UCCUCC Aucc      ucuauuau ug acuc au aucaua ggau   c
|||||  ||| |||||| ||||| |||||   |||||| ||||      |||||||| || |||| || |||||| ||||    
uuucg  gau acguua CAACA AAUGG   AGGAGG uagg      ggauagua gc ugag ua uaguau ucug   u
     --   u      u     A     AUU      C    uucuaa        c  -    a  a      -    uuc 


mirna_id: mtr-MIR1509a
hairpin:
     -   cu --ucuu         cu    a    uuu     cu   -uc  ----guuuucuuu   u   u c             U      AUA            uuuuucuuuuuauugu 
cccgg ccu  c      gccucauag  aguu gggu   cguug  guc   gu             uga cca u aauuuuuUUAAUC AGGAAA   CGGUGgagaggg                u
||||| |||  |      |||||||||  |||| ||||   |||||  |||   ||             ||| ||| | ||||||||||||| ||||||   ||||||||||||                u
ggguc gga  g      cggaguauu  ucga ccua   guaac  uag   cg             acu ggu a uuaaaGAAAUUAG UCCUUU   GCCAucucuucu                g
     u   au uuuuuc         ac    c    ugu     ag   uau  auuuuuuauuauu   u   c u             U      -AG            gcucucuauaguuaga 


mirna_id: mtr-MIR2087
hairpin:
   ugau     c    c                a   a               a             a      a   u             AG                       agugu    uuuuuu 
gcu    gaaaa ugcu uugacacauaugauag gcu aaaaacauauguaaa gacgaaaaugccc uguagc guu acuaccGAAGUAA  AACCGGCUGCAGuuaacugcuga     gaag      u
|||    ||||| |||| |||||||||||||||| ||| ||||||||||||||| ||||||||||||| |||||| ||| |||||||||||||  |||||||||||||||||||||||     ||||      u
cga    cuuuu acga aacuguguauacuauc cga uuuuuguguacauuu cugcuuuuacggg acguug caa ugauggCUUCAUU  UUGGCUGACGUCaauugacggcu     uuuc      u
   ---u     a    c                c   c               a             g      c   u             CU                       -gcuu    uuuuuu 


mirna_id: mtr-MIR2088a
hairpin:
     gua  uc   guagac  c        c                         aaaac   cca    ug 
ucucu   uc  gaa      gg ggcuuaac gauguAGGCCUAGAUUACAUUGGAC     agu   aacu  a
|||||   ||  |||      || |||||||| |||||||||||||||||||||||||     |||   ||||   
agaga   ag  cuu      uc cugaauug cuacAUCUGGAUCUAAUGUAACCUg     uca   uugg  g
     --a  -u   augaaa  u        u                         guucu   ---    ua 


mirna_id: mtr-MIR2089
hairpin:
        ccaagcauucaaga     a     au  a           C         C  ug    ug u    agau 
gcaggcaa              ucuag gcaag  uu uuUUACCUAUU CACCAAUUC AU  aucc  g uuca    c
||||||||              ||||| |||||  || ||||||||||| ||||||||| ||  ||||  | ||||    u
cguuuguu              agauc cguuc  aa AAAAUGGAUAA GUGGUUAGG ua  uagg  c aagu    g
        uauauauaaaacga     a     ac  c           U         A  ug    gu u    gaaa 


mirna_id: osa-MIR1846e
hairpin:
-  c   c   AA             AC     g 
 cg auc gcC  CGAGGAGGCCGGG  CAccg a
 || ||| |||  |||||||||||||  |||||  
 gc uag cgg  gcuccuccggccu  guggc u
g  c   a   cc             ca     c 


mirna_id: osa-MIR1428f
hairpin:
-u               A   CC            u aa  a      -cgau a 
  gcuuugcgAAUUCAC GGC  UAUCUUGUGgua g  cu aguacg     g u
  ||||||||||||||| |||  |||||||||||| |  || ||||||     |  
  cgaaaugcuuaagug ccg  auagaauaccau c  gg uuaugc     c u
ug               -   ua            u gg  g      auggu u 


mirna_id: osa-MIR1428g
hairpin:
-                  G CC      G     u aa  g    --   g     
 cgcuuugcgAAUUCACAG C  UAUCUU UGgua g  cu agua  cgc auga 
 |||||||||||||||||| |  |||||| ||||| |  || ||||  ||| ||| u
 gcgaaacguuuaaguguc g  auagaa accau c  gg uuau  gcg uauu 
c                  - ua      a     u gg  g    ac   g     


mirna_id: osa-MIR2090
hairpin:
auuauuAAC         A                 c -agg   agaacg 
         UCUGAUUCU GAAUUUUUGcguuaaag g    acg      a
         ||||||||| ||||||||||||||||| |    |||       
         aggcuaaga cuuaaaaacgcaauuuc c    ugu      a
ccuauuccu         c                 a agaa   cacaaa 


mirna_id: osa-MIR2091
hairpin:
-ga    AA       GAGG       c   cg    gu    gu 
   gcUC  CCGAGCC    AGGAGGc aug  ugcg  ggcu  g
   ||||  |||||||    ||||||| |||  ||||  ||||   
   cgag  gGUUCGG    UCCUCCG UAC  ACgu  ccga  g
cga    gc       ---A       U   AU    --    ga 


mirna_id: osa-MIR2092
hairpin:
uug     --    CU   -  C     U    ccc    ga     cacuacu 
   aucuc  cCAA  GAA GU GGUGU UACU   acaa  ugaua       a
   |||||  ||||  ||| || ||||| ||||   ||||  |||||       g
   uGGAG  GGUU  CUU CG CCAca auga   uguu  acuau       u
-ug     AC    AC   A  A     c    ---    -a     ucccacc 


mirna_id: osa-MIR2093
hairpin:
a  -   ugu                 A 
 cu gga   GUGCAUUAAUUGGAAGA C
 || |||   ||||||||||||||||| A
 ga ccu   UACGUAAUUAACCUUCU C
a  u   ucu                 A 


mirna_id: osa-MIR2094
hairpin:
----   gga  agu    C     -     C  G   c 
    ucg   ga   gUGG UGCUA GGCUC UG GUG a
    |||   ||   |||| ||||| ||||| || |||  
    agc   CU   CACC ACGGU UCGAG AC cac a
cggu   gaG  --G    U     G     -  a   c 


mirna_id: osa-MIR2095
hairpin:
-    aaCUG   AUU   CG      A        uagau  a 
 guga     AUA   UUA  AUGAAU Gaagguua     gu g
 ||||     |||   |||  |||||| ||||||||     ||  
 cacu     UAU   AAU  UAUUUA CUUCuaau     ca u
a    cauaa   --G   AG      C        uuaau  g 


mirna_id: osa-MIR2096
hairpin:
--      gca              C                    g  gccg           a      gcgagaauucacugaaauuaccgcgccaucuuaucuccgcaaguugaagaa 
  gacgcc   cUGCCGAUUUCCCC UCGGGCGagccaucggagcg gg    uuggcucccaa gcagac                                                   u
  ||||||   |||||||||||||| |||||||||||||||||||| ||    ||||||||||| ||||||                                                    
  uugcgg   GGCGGCUAAAGGGG AGUCCgcucgguagcuuugc cc    aaccgaggguu cgucug                                                   a
gu      -AG              -                    g  ----           -      uauacaucaucaucuguguacuuaagugauuuuuaaugacgcgggcuuaau 


mirna_id: osa-MIR2097
hairpin:
-guggg         G    G C     AG    uaga  gauagag       a   g ---g   -ag gg u g  uu    g     cg 
      gaAGAGAUG GACG G AGGGA  gaag    ug       uuugggg uag a    gga   g  a a au  gguu uuuuu  g
      ||||||||| |||| | |||||  ||||    ||       ||||||| ||| |    |||   |  | | ||  |||| |||||   
      uuucUUUAC CUGU C UUCUU  CUUu    ac       gaauccc guc u    uuu   c  u u ug  ccaa aaaaa  a
cgaaaa         G    G -     CU    uaag  -----ga       c   g gaca   gua uu u g  uu    a     aa 


mirna_id: osa-MIR2098
hairpin:
-cagucuu    c     C  GGA     -   A     
        gugc auUCC GU   GGCAG CCG UGag 
        |||| ||||| ||   ||||| ||| ||| g
        caCG UGAGG CG   CUGUU GGC auua 
guaaucuu    -     -  -AA     U   a     


mirna_id: osa-MIR2099
hairpin:
--        U     -   UUG    A    U 
  cugcuuug GAAUA UGU   UACA GCUU A
  |||||||| ||||| |||   |||| ||||  
  gacgagac CUUAU GCG   AUGU CGAA C
uu        -     U   ---    -    A 


mirna_id: osa-MIR2100
hairpin:
u    -     U  AG     -     A  caa     caaacaagccguaggguggguggggaagaucggaagaagc 
 uccc UUCUC CA  UUGCC AAACA Gc   guugc                                        g
 |||| ||||| ||  ||||| ||||| ||   |||||                                        g
 aggg gaggG GU  GGCGG UUUGU CG   CAAug                                        c
a    u     -  GA     A     -  --C     ucuuucucuagccauuuuucuuuuuuuuaucgcuagcuca 


mirna_id: osa-MIR2101
hairpin:
-ucuua  u    -       --A       A   ggag     gguauacaaccc 
      uc cACA UGUUUAC   AGUUAAA UGU    cagag            a
      || |||| |||||||   ||||||| |||    |||||             
      ag gUGU ACGAGUG   UCAAUUU gca    gucuc            a
uaccgg  c    U       AAC       A   ---a     acgguuugaaca 


mirna_id: osa-MIR2102
hairpin:
   a  g  -    AA       ---   C     ccaccgcugccaugcggauga 
ccg ug ua GGGC  GCCGCCG   CCG CACca                     c
||| || || ||||  |||||||   ||| |||||                     a
ggc gc gu ccuG  CGGUGGC   GGC GUGGU                     a
   a  g  a    --       CUU   C     ACcuaggcuucucgaucuuca 


mirna_id: osa-MIR396f
hairpin:
-      cUC    CA                g   ucgugugugcaugcuccucauauauuguucuagaucccaugcaugaugcau 
 gccaug   UCCA  GGCUUUCUUGAACUgu aac                                                   a
 ||||||   ||||  |||||||||||||||| |||                                                   u
 ugguac   AGGU  CUGAAAGAACUUGAUA uug                                                   c
g      aAA    UC                g   uucuaccccuaggucuacgcguagcuacuggauuaagucuagucuagcuag 


mirna_id: osa-MIR2103
hairpin:
cggc     -----        U   U   - ---G      g 
    gccuu     UUUCCCUC CCG GCG C    CUCGcc g
    |||||     |||||||| ||| ||| |    ||||||  
    cggag     agagggag ggc cgu g    gagcgg c
----     aacag        -   -   a guag      c 


mirna_id: osa-MIR2104
hairpin:
a  -          g g  u  ga        -    cc   ug     g   g 
 cg ggcgcucacg u gc uc  cccucguc ucgg  gcg  cggua ugc g
 || |||||||||| | || ||  |||||||| ||||  |||  ||||| ||| g
 gc ccgugaGUGC A CG AG  GGGAGCGG Ggcc  ugu  gccgu acg a
g  u          G G  U  --        C    -a   gu     -   g 


mirna_id: osa-MIR2105
hairpin:
-  ug    u    ug     -     a      ga uu u 
 uu  gauc guga  uauuu cauua gaauuu  g  g a
 ||  |||| ||||  ||||| ||||| ||||||  |  | u
 gg  uuag UACU  GUAAG GUAGU UUuaag  u  u u
a  gu    u    UA     U     G      ag uu u 


mirna_id: osa-MIR2106
hairpin:
---u   agaa      -   -          uac     --uga  u 
    gcg    ggaugu ucc gagaaucucg   gccgg     gg u
    |||    |||||| ||| ||||||||||   |||||     ||  
    cgc    cUUACA AGG CUUUUGGAGC   Cgguc     cc u
aagg   --aa      U   U          ---     uagug  c 


mirna_id: osa-MIR827b
hairpin:
-c       c     u    c               c     aug  u    -auug   aauaauuga    gc 
  caugaac uguuu guug uggucaucuagcuac cgugc   cc ggag     gag         cgau  a
  ||||||| ||||| |||| ||||||||||||||| |||||   || ||||     |||         ||||   
  gugcuug ACAAA CGAC ACCAGUAGAUUggug gcacg   gg ucuc     uuc         gcug  g
ga       a     -    U               c     ---  u    gguua   --------g    ac 


mirna_id: zma-MIR396c
hairpin:
-       g  U   -   G   U  UUGAA UG  a 
 cgggcau cu UCC ACA GCU UC     C  ug a
 ||||||| || ||| ||| ||| ||     |  ||  
 guucgua gg agg ugu ugg gg     g  gc c
g       a  u   c   a   u  uggug gu  u 


mirna_id: zma-MIR396d
hairpin:
---- g     --  uUU    AG   UU  UGAA UG  a 
    c ggcau  gc   CCAC  GCU  CU    C  ug a
    | |||||  ||   ||||  |||  ||    |  ||  
    g ucgug  cg   ggug  ugg  gg    g  gc c
ugug g     gu  --u    -g   -u  ugcg gu  u 


mirna_id: gma-MIR167d
hairpin:
aagg   -a   --     aa     A   -  -             cuuu       gggagc 
    guc  caa  gggaa  agUGA GCU GC CAGCAUGAUCUAg    gguuagu      c
    |||  |||  |||||  ||||| ||| || |||||||||||||    |||||||       
    cag  guu  uccuu  ucacu cga cg gucguacuggauc    ccaaucg      a
----   ag   ua     cc     c   u  u             acuc       ugagag 


mirna_id: gma-MIR396c
hairpin:
caac        ------u    c         GC              u     uagug  a 
    aaguccug       uaug uuUUCCACA  UUUCUUGAACUUcu augcc     ca u
    ||||||||       |||| |||||||||  |||||||||||||| |||||     || u
    uucaggau       guac aaaaggugu  aaagaauuugaaga uacgg     gu a
----        cuaaacu    a         aa              -     -ugua  u 


mirna_id: gma-MIR1507b
hairpin:
     a    -                  a     au  uauu uc      
guuug caga gauguauggagugagaga gggaa  ga    u  cgauc 
||||| |||| |||||||||||||||||| |||||  ||    |  |||| c
caagc GUCU CUACAUACCUUACUCUcu cccuu  cu    a  gcuac 
     a    G                  -     cu  ---c uu      


mirna_id: gma-MIR1508b
hairpin:
aauu                    a      a   -   uuaca      
    gcuauucaacugcuauuccc uuucua acc uug     cgagc 
    |||||||||||||||||||| |||||| ||| |||     |||| a
    uggugaGUUGACGAUAAGGG AAAGAU ugg aac     guucu 
uucg                    G      c   u   ---ua      


mirna_id: gma-MIR1510b
hairpin:
uuu      g   A                 U   -u      -  g 
   auggaa ugg GGGAUAGGUAAAACAAC ACU  cuguaa aa u
   |||||| ||| ||||||||||||||||| |||  |||||| ||  
   uaccuu aCC CCUUAUCCAUUUUGUUG uga  gauauu uu a
auc      a   A                 U   uu      g  a 


mirna_id: gma-MIR2107
hairpin:
-aucCA     CC    -CC  U   a 
      AACCU  GUAG   UG AUC a
      |||||  ||||   || |||  
      uugga  cauc   ac uag a
cuacac     cu    cuc  c   c 


mirna_id: gma-MIR2108a
hairpin:
        U    UGUU    UU     a 
cuguguuU AAUG    GUGU  GUCGG a
|||||||| ||||    ||||  ||||| c
gacgcgaa uugu    uaca  uaguc c
        -    -uuu    -u     c 


mirna_id: gma-MIR2108b
hairpin:
       --UG          - UG    ccccu 
guuUUAA    UGUUGUGUUU G  AGaa     g
|||||||    |||||||||| |  ||||      
cgggauu    gcgacgcgaa u  uuuu     a
       uuga          u gu    acauu 


mirna_id: gma-MIR2109
hairpin:
    C        U          ---a     acu 
ggUG GAGUGUCU CGCCUCUGag    gagau   a
|||| |||||||| ||||||||||    |||||    
ccac cucauaga gcggaggcuc    cucua   u
    a        u          cgaa     gag 


mirna_id: lja-MIR167
hairpin:
guuc    -a  -ug      u           GC        ag      uucuu 
    gugc  cc   caauag UGAAGCUGCCA  AUGAUCUG  cuuacc     g
    ||||  ||   |||||| |||||||||||  ||||||||  ||||||     u
    uacg  gg   guuguc acuucgacggu  uacuagac  gaaugg     a
----    aa  uaa      c           -a        aa      uaaua 


mirna_id: lja-MIR396
hairpin:
gu   c       uc            C          ---uucaau  -    c 
  ccu uuuguau  UUCCACAGCUUU UUGAACUGca         ug caug a
  ||| |||||||  |||||||||||| ||||||||||         || |||| u
  gga agauaua  agggugucgaaa aacuuggcgu         ac guac g
-g   u       ga            u          uuuauucuc  a    c 


mirna_id: vun-MIR1507a
hairpin:
  a ua    g    -                  a        c ccuuu        
gu g  uuug caga gguguauggagugagaga gggaaaaa g     gccgauc 
|| |  |||| |||| |||||||||||||||||| |||||||| |     |||||| u
cg u  aagc GUCU CUACAUACCUUACUCUcu ccuuuuuu c     uggcuac 
  a gc    a    G                  -        u ----u        


mirna_id: tca-mir-9a
hairpin:
-   aua  uU       U        G     --g    g 
 cug   uu  CUUUGGU AUCUAGCU UAUga   uauu u
 |||   ||  ||||||| |||||||| |||||   ||||  
 gac   aa  GAGGCCA UGGAUCGA AUAcu   auaa u
u   caa  uu       U        A     aca    u 


mirna_id: tca-bantam
hairpin:
ucagc   a     CU                 GA    uaua 
     gag cgaaa  GGUUUUCACAGUGAUUU  CAGa    u
     ||| |||||  |||||||||||||||||  ||||     
     cuu guuUU  UCGAAAGUGUUACUAGA  GUcu    u
----a   -     AG                 --    uagu 


mirna_id: tca-mir-970
hairpin:
aaac  u       gc    CA         GUAC       guua 
    ga gccggcg  AGCU  GCGUGUGUC    UGAUAgu    u
    || |||||||  ||||  |||||||||    |||||||     
    cu uggccgc  UCGG  CGCACACAG    ACUaucg    c
uccu  c       UA    --         -AAU       auca 


mirna_id: tca-mir-263a
hairpin:
guga   ua   -   c A        G    AA        -  uc 
    gca  ggc cug g AUGGCACU GAAG  UUCACGGG gu  u
    |||  ||| ||| | |||||||| ||||  |||||||| ||  u
    ugu  ccg gaC C UACCGUGA UUUC  AGGUGCcc ca  c
--cc   uc   a   U C        G    --        u  cg 


mirna_id: tca-mir-279b
hairpin:
gguaguuauc     g    u        A         G    u  ua 
          cuaaa uuuu GAUGGGUG GGGUUUGGU CAUG uu  u
          ||||| |||| |||||||| ||||||||| |||| ||   
          gguuu aaaA CUACUCAC CCUAGAUCA GUac aa  u
-------ugu     a    C        A         -    u  uu 


mirna_id: tca-mir-993
hairpin:
ggca         uc    C      UC          uagaau 
    cauccguga  UACC UGUAGA  CGGGCUUuug      u
    |||||||||  |||| ||||||  ||||||||||       
    guaggcauU  AUGG ACAUCU  GCUCGAAGac      u
-aag         CU    -      CU          uagauu 


mirna_id: tca-mir-965
hairpin:
-gg  -  cucc       -  cu    U            C   g   -  -  u 
   cg cg    gauugga cc  ggGG GGAAAGUUGUAC GCU aug gu ga u
   || ||    ||||||| ||  |||| |||||||||||| ||| ||| || ||  
   gc gc    cuaaccu gg  UCCC CUUUUCGAUAUG CGA Uac ca cu u
cua  a  ---a       u  uU    -            -   A   a  u  u 


mirna_id: tca-mir-315
hairpin:
gu       -gcUUU            A       gggug 
  uccuuuu      UGAUUGUUGCUC GAAAGCc     u
  |||||||      |||||||||||| |||||||      
  aggagaa      acuaauaacggg cuuucgg     u
-c       accuuu            -       aaaga 


mirna_id: tca-mir-1000
hairpin:
----------------ac            AUAU       UCA        -  - g 
                  ggcucggccaug    UGUCCUG   CAGCagua cu g u
                  ||||||||||||    |||||||   |||||||| || |  
                  ccgggccgguAC    ACAGGGC   GUCGUCau ga c u
cccgccgcagccgguucu            CAGU       UUC        u  g c 


mirna_id: tca-mir-981
hairpin:
uacaagacuuaua       a   -a         -g    ucg      auu 
             ucucaua guu  cggguuucg  ggca   gaaccg   u
             ||||||| |||  |||||||||  ||||   ||||||   u
             aggguau cag  GUCCAAAGC  CUGU   CUUggu   a
---------acac       -   AC         AG    -UG      cga 


mirna_id: tca-mir-304
hairpin:
augcaauaga  AA       A    -   U      c  uu   u 
          cu  AUCUCAA UUGU AAA GUGUAc ua  guu a
          ||  ||||||| |||| ||| |||||| ||  ||| a
          gg  uagaguu aaua uuu cgcaug au  uaa a
-ccuuuacca  gc       a    a   c      a  uu   u 


mirna_id: aga-mir-190
hairpin:
uguuuggugg       u      -            AU      U  u   gau 
          gacaguu cggugA GAUAUGUUUGAU  UCUUGG UG uaa   u
          ||||||| |||||| ||||||||||||  |||||| || |||    
          cugucag gccauu uuauacaaacua  aggacc ac auu   u
--------ug       u      a            --      c  u   aac 


mirna_id: aga-mir-929
hairpin:
-----c    gcg         a        ag         -   uu 
      cuac   ugggauuaa uugacucu  uagggaguc cuu  a
      ||||   ||||||||| ||||||||  ||||||||| |||   
      gaug   gccuuaGUU GACUGAGG  AUCCCUCag gag  u
ccacgu    ---         A        CA         c   ca 


mirna_id: aga-mir-927
hairpin:
--ua       g               CU       AC    g      
    guuaaug uuuguUUUAGAAUUC  ACGCUUU  Ccgu auuaa 
    ||||||| |||||||||||||||  |||||||  |||| |||| a
    caauugc aagcaaagucuuagg  ugcgaaa  ggcg ugaug 
gcaa       a               uu       -c    -      


mirna_id: aga-mir-993
hairpin:
ugcgc  -    g   cc    -      uuc          -     -----   aau      c 
     uc cucc uga  uacc cuguag   cgggcuuuug ugggu     uga   auuaua a
     || |||| |||  |||| ||||||   |||||||||| |||||     |||   ||||||  
     ag gagg acU  AUGG GAUAUC   GCUCGAAGac auucg     acu   uaauau u
----a  u    g   CU    A      UUU          u     cauau   --c      a 


mirna_id: aga-mir-988
hairpin:
cug    gcauug               u u    ug   -----    g      u 
   ugga      gacauugccggugug g uuug  aca     auga auuuaa a
   ||||      ||||||||||||||| | ||||  |||     |||| ||||||  
   gccu      uuguggcgguCGCAC C AAAC  UGU     uacu ugaauu g
--a    ------               U C    GU   UCCCC    -      u 


mirna_id: aga-mir-970
hairpin:
-au  c  a            a    u        ---u    a   ua u 
   gg ug cggaagauagcc gcgu uguuuuau    uggu ugu  c a
   || || |||||||||||| |||| ||||||||    |||| |||  |  
   cc ac gccuuuUAUCGG CGCA ACAGAAUA    aucg acg  g c
agc  a  -            -    C        CUau    a   uc u 


mirna_id: aga-mir-957
hairpin:
-      -    gu  g              g        uau   g 
 ugauca cugc  gc uuaguuuugggcgg uuuuagug   uuc a
 |||||| ||||  || |||||||||||||| ||||||||   ||| u
 auuggu gacg  CG AGUCAAAACCUGCC AAAGUuau   aag g
c      a    gu  G              -        cuu   a 


mirna_id: aga-mir-137
hairpin:
-aa   -     ug  c   c       ug   uac     c  ug 
   aac uuggu  gc acg guauucu  ggu   uaaca ac  u
   ||| |||||  || ||| |||||||  |||   ||||| ||  u
   uug gauca  uG UGC CAUAAGA  UCG   AUugu ug  u
aug   u     gu  A   A       GU   -UU     -  ua 


mirna_id: aga-mir-965-1
hairpin:
cgaa  aaau        u     a      u       a  c    u c  a 
    gu    cgacgaau cugaa ggggaa gcuguac cu uaug g ua a
    ||    |||||||| ||||| |||||| ||||||| || |||| | ||  
    cg    guugcuug gauUU CCCUUU CGAUAUG GA AUac c au a
-aaa  -agc        c     A      U       C  -    - u  a 


mirna_id: aga-mir-1000
hairpin:
--------      a       AU U       UC         cu  uu 
        ccuagc gucgaug  A UGUCCUG  ACAGCAGUa  uu  g
        |||||| |||||||  | |||||||  |||||||||  ||   
        ggaucg cagcuac  u acagggc  uguugucau  ga  c
uacuuuug      -       cu u       uu         uu  uc 


mirna_id: aga-mir-286
hairpin:
   -auaa         --au   -   a          --uc c gu a 
guc     uuuggggcg    ugu cgg cuagucgcug    g a  c u
|||     |||||||||    ||| ||| ||||||||||    | |  |  
cag     aaaucCUGC    ACA GCC GAUCAGUgau    c u  g u
   caagc         GCUC   A   A          ucca u ug c 


mirna_id: aga-mir-263b
hairpin:
-ug     uua     CU      UG     A       uggau  uac 
   accaa   uggac  UGGCAC  GGAGA UUCACag     cg   c
   |||||   |||||  ||||||  ||||| |||||||     ||    
   ugguu   acuug  accgug  uuucu agguguc     gc   a
ccg     uag     cu      cu     -       --uuu  uau 


mirna_id: aga-mir-309
hairpin:
aag            cc      ag    uccgauu 
   augcgacaaacu  guccag  ggug       u
   ||||||||||||  ||||||  ||||       c
   uACGCUGUUUGA  CGGGUC  CUac       a
aaa            AA      -A    ucaagua 


mirna_id: ame-mir-252a
hairpin:
aau  u u  ug  c         A U  C       ugacuagguug   u g 
   cc g cu  uu AUAAGUACU G GC GCAGGAG           ggu a a
   || | ||  || ||||||||| | || |||||||           ||| |  
   gg c gg  aa uauucguga c cg cguccuc           cca u a
---  c u  gu  c         a u  u       -------uaua   u a 


mirna_id: ame-mir-13b
hairpin:
g        -        -u        gc   -uug  u 
 cgauccaa ucgucaaa  ugguugug  gug    cu u
 |||||||| ||||||||  ||||||||  |||    || u
 gcuagguU AGCAGUUU  ACCGACAC  Uac    ga c
-        U        UU        UA   uuua  u 


mirna_id: ame-mir-996
hairpin:
-        aauu  a            a  g    g    uuuug 
 aaacagau    cc uaggcgaguaug au uggu cacg     a
 ||||||||    || |||||||||||| || |||| ||||     u
 uuugucua    gg aUCUGCUCAUAC UA AUCA GUgc     u
u        --au  c            A  G    -    uuuau 


mirna_id: ame-mir-263b
hairpin:
aa   -  ug      CU     C  G    A     a   -      
  ggu uc  gcgggu  UGGCA UG AAGA UUCAC gau gugca 
  ||| ||  ||||||  ||||| || |||| ||||| ||| |||| g
  cca ag  cguuca  accgu ac uucu aggug cua uaugu 
ag   u  gu      cu     a  g    -     -   a      


mirna_id: ame-mir-92b-1
hairpin:
-cacgaa                 a    uaa     --au    ag 
       gcguauucaauuagguc ggac   ugcaa    augu  u
       ||||||||||||||||| ||||   |||||    ||||  g
       cgcgugaguuAGUCCGG CCUG   ACGUU    uaca  u
cuaaaug                 C    CCC     AAac    gc 


mirna_id: ame-mir-985
hairpin:
gaaaggguagaaacgaucgaucgaucgacaaa  g auu    ---     u 
                                ug c   uauu   acguu c
                                || |   ||||   |||||  
                                AC G   AUAA   UGUAA A
------------------ugacuuuauuaugg  G GCU    CCU     A 


mirna_id: ame-mir-1000
hairpin:
-----ac     ----        U     UG     G     c  -  u 
       gucgc    cggggAUA UGUCU  UCACA CAGUa gc cu u
       |||||    |||||||| |||||  ||||| ||||| || ||  
       cggug    gcuccugu acagg  agugu gucau ug ga a
ugcuucc     cccu        u     gu     g     -  a  a 


mirna_id: ame-mir-1006
hairpin:
-au    ucu   aa         aaa     a 
   uggu   gaa  gaauugagu   uuuau u
   ||||   |||  |||||||||   ||||| u
   ACUA   CUU  UUUAGCUUA   AAAua a
AUU    --U   -C         ---     a 


mirna_id: ame-mir-981
hairpin:
gggaa   a    -aa   c          -     g       -u  u 
     ugg ugca   cgu uggguuucgu gacag cgagccg  uc u
     ||| ||||   ||| |||||||||| ||||| |||||||  || u
     acc acgu   gcA GUCCAAAGCA CUGUU GCUUggu  ag a
---aa   a    cua   C          A     -       uc  c 


mirna_id: ame-mir-316
hairpin:
---      cc      gU    U     G        CC  u  aa 
   gugugg  gagggu  GUCU UUUCC CUUUGCUG  Gc ga  u
   ||||||  ||||||  |||| ||||| ||||||||  || ||  g
   cacgcc  cuccca  cgga aaggg gaaacgac  cg cu  g
aac      --      gc    c     -        --  c  ga 


mirna_id: ame-mir-993
hairpin:
ggca         uc    c      uc          uagaau 
    cauucguga  uacc uguaga  cgggcuuuug      u
    |||||||||  |||| ||||||  ||||||||||      g
    guaggcauU  AUGG ACAUCU  GCUCGAAGac      u
-aca         CU    -      CU          uauaaa 


mirna_id: bmo-mir-252
hairpin:
aacuaaa   ug  cC        -  U  C       c  uuu 
       ccu  uu  UAAGUACU AG GC GCAGGAG gu   g
       |||  ||  |||||||| || || ||||||| ||    
       gga  aA  AUUCGUGA UC CG CGUCCuc ua   u
--auuug   gu  CU        A  -  U       -  uga 


mirna_id: bmo-mir-970
hairpin:
---     gaa           UU       C      U     u  gac 
   uggag   uagacagAGCC  GCGUGUG UCUUAU GGUAg gu   u
   |||||   |||||||||||  ||||||| |||||| ||||| ||    
   accuc   gucugUCUCGG  CGCACAC AGAAUA CUauc ua   g
gcg     --a           --       -      -     -  aua 


mirna_id: bmo-mir-965
hairpin:
auauaaaug  -           aC             G    A    ucaau 
         gc ugcauagcuaa  GGGAGAAGCUAUA CGCU UAUG     a
         || |||||||||||  ||||||||||||| |||| ||||     u
         cg acguauuggUU  CCCUUUUCGAUAU GCGA AUac     u
-cucuuaua  u           -C             -    -    uaaaa 


mirna_id: bmo-mir-274
hairpin:
ggcuguu         a   g    -    C     CU       - G   u 
       guuaggcga guu GUUU GUGA CGUCA  AACGGGC A Ugu a
       ||||||||| ||| |||| |||| |||||  ||||||| | |||  
       caguucgcu caa UAAA CGCU GCGGU  UUGCUcg u gca a
-------         -   G    A    A     -U       u g   u 


mirna_id: bmo-mir-993b
hairpin:
---------------------------------   a  uu      c    C      UC          uaaaa 
                                 ggc ca  cgugau UACC UGUAGA  CGGGCUUUCG     a
                                 ||| ||  |||||| |||| ||||||  ||||||||||      
                                 ccg gu  gcacUA AUGG ACAUCU  GCUCGAAAgc     a
gucaagaacugauuaacaucuuuuccaccgcac   -  cg      U    -      CU          uaaac 


mirna_id: bmo-mir-993a
hairpin:
ggca  uu     UC    C      UC          uagauu 
    ca  cguga  UACC UGUAGA  CGGGCUUUUg      a
    ||  |||||  |||| ||||||  ||||||||||       
    gu  gcacU  AUGG ACAUCU  GCUCGAAGac      a
-aag  cg     CU    -      CU          uacauu 


mirna_id: ebv-mir-BART21
hairpin:
          uU        AAG       A   agu 
gggcugggua  CACUAGUG   GCAACUA Cac   u
||||||||||  ||||||||   ||||||| |||    
ccuggccuaU  GUGGUCAC   UGUUGAU gug   a
          UU        CCG       C   cag 


mirna_id: ebv-mir-BART22
hairpin:
       g         c   ag   -    -  u 
gucacag ugcuagacc ugg  uug aacc ag a
||||||| ||||||||| |||  ||| |||| || c
caguguU AUGAUCUGG ACU  AAC UUgg uc c
       G         U   GA   A    c  a 


mirna_id: hsa-mir-2110
hairpin:
       UU       C      --    U  g   u 
caggggu  GGGGAAA GGCCGC  UGAG Ga gcg c
|||||||  ||||||| ||||||  |||| || ||| g
guucuca  cuccuuu cuggcg  acuc uu ugu g
       cc       u      cc    u  g   c 


mirna_id: ath-MIR2111a
hairpin:
   ug   a      ---        c                    U     gcuuaauuuacgcaggaaauuuguaua 
cga  aug guauug   gugaggac gggUAAUCUGCAUCCUGAGG UUAaa                           c
|||  ||| ||||||   |||||||| |||||||||||||||||||| |||||                            
gcu  ugc cauaac   cauucuug uCCAUUAGGCGUAGGGCUCC Gauuu                           g
   ca   a      auu        c                    U     uccauaugauuauguguaugcauauac 


mirna_id: ath-MIR2111b
hairpin:
   c   a  aa    aagaug   -  --a     -   u   c      U   C         U      ccaauuaa  a       au 
caa aac cg  gaag      aag gu   cuuga uga gaa gggUAA CUG AUCCUGAGG UUAaaa        gc uauacau  g
||| ||| ||  ||||      ||| ||   ||||| ||| ||| |||||| ||| ||||||||| ||||||        || |||||||   
guu uug gc  uuuc      uuc ca   gaacu auu cuu uCCAUU GAC UAGGGCUCC Aauuuu        ug auaugua  c
   -   -  aa    ----ga   a  aaa     c   c   c      U   A         U      --------  -       ag 


mirna_id: ath-MIR2112
hairpin:
guau  a                     C  U   a    g   aa   accaaua  ggu    agcgaaa   ac 
    ga augaugCGCAAAUGCGGAUAU AA GUa auca gac  caa       ga   gcuc       aca  a
    || ||||||||||||||||||||| || ||| |||| |||  |||       ||   ||||       |||   
    cu uacuACGCGUUUACGCCUAUA UU cau uagu cug  guu       cu   uggg       ugu  a
cagu  c                     U  C   a    a   gg   acaaaga  auu    --aaaag   aa 


mirna_id: hsa-mir-2114
hairpin:
  u   u   ccU        C     A  -G    gaua 
cc cca gcu   AGUCCCUU CUUGA GC  GUCg    a
|| ||| |||   |||||||| ||||| ||  ||||     
gg ggu cga   UCAGGGAA GAACU CG  Cagu    u
  u   -   acU        C     C  AG    acac 


mirna_id: hsa-mir-2115
hairpin:
acuguc    - --        c           CUC        ggaa  a 
      aucc c  acugcuuc AGCUUCCAUGA   CUGAUGGA    uc c
      |||| |  |||||||| |||||||||||   ||||||||    ||  
      uagg g  ugacgaaG UCGGAGGUACU   GACUACuu    ag a
auuuac    a ua        A           UAA        ---a  u 


mirna_id: hsa-mir-2116
hairpin:
ga     g  a         A    A     U    cca 
  ccuag cu ggGGUUCUU GCAU GGAGG CUuc   u
  ||||| || ||||||||| |||| ||||| ||||   g
  ggauc ga CCUCAAGAA CGUA CCUCC gaag   c
-a     a  C         C    C     u    aau 


mirna_id: hsa-mir-2117
hairpin:
gcucu    uacu       --    u  u       --a  a 
     gauu    ucugucc  ggca gg gaacagc   gg u
     ||||    |||||||  |||| || |||||||   || u
     cuag    aGACAGG  CCGU UC CUUGUcg   uc g
----u    -ucu       AA    U  U       aug  g 


mirna_id: hsa-mir-548q
hairpin:
auauu   C     C         G C G                 c  uu 
     agG UGGUG AAAAGUAAU G G uuuuugccauuacuuuu au  u
     ||| ||||| ||||||||| | | ||||||||||||||||| ||  u
     ucc accac uuuucauua u c aaaaacgguaaugaaaa ua  a
-----   a     u         g a g                 u  cc 


mirna_id: bfl-mir-278
hairpin:
--          c             uu    a   gucgg  u 
  ucucccccgc cggacgagaaccc  cgcc guc     gc u
  |||||||||| |||||||||||||  |||| |||     ||  
  agagggggUG GCUUGCUUUUGGG  GUGG Uag     cg u
gc          A             --    C   ----a  a 


mirna_id: lmi-mir-307
hairpin:
--A         CCU  G       uc gu 
   CUCACUCAA   GG UGUGAUG  c  u
   |||||||||   || |||||||  |  g
   GAGUGAGUU   CC ACACUgc  g  a
AGC         CCU  A       cc ag 


mirna_id: lmi-mir-276
hairpin:
-u    A     AG         G    u 
  AGCG GGUAU  AGUUCCUAC ugug u
  |||| |||||  ||||||||| ||||  
  UCGU CCAUA  UCAAGGAUg auau g
UC    G     CU         -    u 


mirna_id: lmi-mir-281
hairpin:
---        -UA     C      --  a 
   AAGAGAGC   UCCGU GACAGU  ac g
   ||||||||   ||||| ||||||  || u
   UUCUCUCG   AGGUA CUGUca  ug g
AAU        UUG     -      aa  a 


mirna_id: lmi-mir-210
hairpin:
--        -G    U        uuag gau 
  AGCUGCUG  ACAC GCACAAGA    c   u
  ||||||||  |||| ||||||||    |    
  UCGGCGAC  UGUG CGUGUUCu    g   a
UA        AG    -        --ca aaa 


mirna_id: lmi-mir-10
hairpin:
-U   -  G    U           ug    
  ACC CU UAGA CCGAAUUUGUu  aca 
  ||| || |||| |||||||||||  || u
  UGG GA AUCU GGCUUAAAcag  uga 
UU   A  G    U           cg    


mirna_id: lmi-mir-9a
hairpin:
--U       U        G     -gu  a 
   CUUUGGU AUCUAGCU UAUGA   gc u
   ||||||| |||||||| |||||   ||  
   GAAGCCA UGGAUCGA AUAcu   ug g
AUU       U        A     guc  u 


mirna_id: lmi-mir-8
hairpin:
--    -     G     C      uug ga 
  CAUC UUACC GGCAG AUUAGA   c  c
  |||| ||||| ||||| ||||||   |   
  GUAG AAUGG CUGUC UAAUcu   g  u
CU    C     A     A      uua ag 


mirna_id: mcv-mir-M1
hairpin:
   -u     ac    U      AUU     G      g uu 
agg  gccau  guuc GGAAGA   UCUAG UACACU g  c
|||  |||||  |||| ||||||   ||||| |||||| |   
ucc  uggug  uAAG CCUUCU   AGGUC GUGUgg u  c
   uc     gu    U      CUU     -      g ua 


mirna_id: bra-MIR157a
hairpin:
      c    ugUU        -           u     --u        a  aca   gua    -     a   c 
gugaug uggu    GACAGAAG AUAGAGAGCAC aagga   gacaugca gu   uau   ugua ucauc cac g
|||||| ||||    |||||||| ||||||||||| |||||   |||||||| ||   |||   |||| ||||| ||| c
uauuac acca    cugucuuc uaucucucgug uuucu   cuguacgu cg   aua   acau aguag gug c
      c    ----        a           c     cau        c  ---   aaa    u     -   u 


mirna_id: bra-MIR159a
hairpin:
aa            a         c      -uu    ------      aga      g  a  c    a uc     -    cu       aua 
  guagggcuccuu uaguucaaa gagagu   agca      ggguaa   aaagcu cu ag uaug a  ccaua agcc  aauccuu   u
  |||||||||||| ||||||||| ||||||   ||||      ||||||   |||||| || || |||| |  ||||| ||||  |||||||   a
  cAUCUCGAGGGA GUUAGGUUU uucuca   ucgu      cccguu   uuucga ga uc auac u  gguau uugg  uuaggaa   u
-a            A         c      uuu    uaauuu      caa      g  c  u    a uc     a    -u       aaa 


mirna_id: bra-MIR160a
hairpin:
ua       u      a  ugu      C       CU         c u ua  c         
  uguguag uguaua ga   guaUGC UGGCUCC  GUAUGCCAu c c  ag ucaucgac 
  ||||||| |||||| ||   |||||| |||||||  ||||||||| | |  || ||||||| c
  auacauu acauau cu   uAUACG ACCGAGG  UAUGCGgua g g  uc aguaguua 
-c       u      a  -uu      U       AG         a u cc  c         


mirna_id: bra-MIR164a
hairpin:
c   cac       A  CA             ccaacaa   c    u 
 cuc   guUGGAG AG  GGGCACGUGCAaa       aca gaga c
 |||   ||||||| ||  |||||||||||||       ||| ||||  
 gag   caaccuc uc  cucgugcacguuu       ugu cucu u
c   -ua       c  ac             -----aa   a    a 


mirna_id: bra-MIR167b
hairpin:
     -    g  ucu a         C             ua  u   uu     guuga      g 
ggugu acag ca   g UGAAGCUGC AGCAUGAUCUAau  ac uuc  ucucu     uuuuau a
||||| |||| ||   | ||||||||| |||||||||||||  || |||  |||||     ||||||  
ccacg uguc gu   c acuuugacg uuguacuagauua  ug gag  agaga     aaggua c
     c    a  uac c         c             gc  u   -u     ----a      a 


mirna_id: bra-MIR167d
hairpin:
    cac   -  u u a         C               --u   ---     c        
ggcg   cgg ca c g UGAAGCUGC AGCAUGAUCUAauua   cuu   ucuuu ucuguug 
||||   ||| || | | ||||||||| |||||||||||||||   |||   ||||| |||||| a
ccgc   guc gu g c acuuugacg uuguacuagauuagu   gag   agaaa agguagc 
    ucu   a  u c c         c               ugu   uac     -        


mirna_id: bra-MIR171a
hairpin:
  a        ug             -     aca    uuu 
cg gauauugg  ugguucaaucaga aaacc   cucu   g
|| ||||||||  ||||||||||||| |||||   ||||    
GC CUAUAACC  GCCGAGUUaguuu uuugg   gaga   u
  A        GU             g     cua    ugu 


mirna_id: bra-MIR172a
hairpin:
    uu    a gc      c           a    gaa  uga     cu      u 
cguu  uugu g  gcagca caucaagauuc caug   au   aaaau  ccuaau u
||||  |||| |  |||||| ||||||||||| ||||   ||   |||||  |||||| u
gcag  aaca c  CGUCGU GUAGUUCUAAG guau   ua   uuuug  ggauua u
    cc    a UA      A           A    aug  uag     --      a 


mirna_id: bra-MIR172b
hairpin:
u  a         C           A    -gaaau g   aa         ua 
 gu gguGCAGCA CAUUAAGAUUC CAug      u aga  acccuaauu  u
 || ||||||||| ||||||||||| ||||      | |||  |||||||||   
 ca cUACGUCGU GUAGUUCUAAG guau      a ucu  ugggauuaa  a
a  a         A           A    auguau g   --         uu 


mirna_id: bol-MIR157a
hairpin:
   u           -           u     --u  c    a   acaagga 
ggu gUUGACAGAAG AUAGAGAGCAC aagga   ga augc agu       u
||| ||||||||||| ||||||||||| |||||   || |||| |||        
cca uaacugucuuc uaucucucgug uuucu   uu uacg uua       a
   -           a           u     cau  c    c   aaggaau 


mirna_id: bol-MIR172b
hairpin:
u  a         c           a    -gaaau g   aa         ua 
 gu ggugcagca cauuaagauuc caug      u aga  acccuaauu  u
 || ||||||||| ||||||||||| ||||      | |||  |||||||||   
 ca cUACGUCGU GUAGUUCUAAG guau      a ucu  ugggauuaa  a
a  a         A           A    auguau g   --         uu 


mirna_id: bol-MIR398a
hairpin:
uc       A   U A           Auc   --uu     uuuaag 
  ucaaaGG GUG C UGAGAACACGG   cuc    guuuc      a
  ||||||| ||| | |||||||||||   |||    |||||      u
  aguUUCC CAC G ACUCUUGUGUu   gag    caaag      u
-a       C   U G           -au   uuac     ucaccu 


mirna_id: sja-let-7
hairpin:
u    -- G     C            g    uuaaa 
 gGGA  G UAGUU GUUGUGUGGUuu cuua     a
 ||||  | ||||| |||||||||||| ||||      
 cccu  c gucag caacauaccaga gaau     u
a    uu g     c            a    ucuag 


mirna_id: sja-mir-71a
hairpin:
     a  ag     U     A  AU  U          c 
gugau cu  ugcug GAAAG CG  GG AGUGAGAugc a
||||| ||  ||||| ||||| ||  || |||||||||| g
cacua ga  auggc cuuuc gc  cc ucgcucuacg u
     a  --     c     c  -c  u          u 


mirna_id: sja-bantam
hairpin:
  gu       u      c   g   --------    c   u 
aa  cggcuuu auugcg ucu aga        aaaa caa u
||  ||||||| |||||| ||| |||        |||| |||  
uu  GUCGAAA UAGCGC AGA Ucu        uuuu guu c
  UG       U      U   G   auuuauuu    c   a 


mirna_id: sja-mir-125a
hairpin:
  U -      A C     AU     -----    a      au 
gc C CCUGAG C CUUUG  UGUCu     cguu aacaua  u
|| | |||||| | |||||  |||||     |||| ||||||   
cg g ggacuc g gaaac  acgga     guaa uuguau  c
  u u      a u     cg     cuaau    a      au 


mirna_id: sja-mir-125b
hairpin:
aUC       C             a   auuaua   u 
   CCUGAGA UGAUAAUUGCUCu guu      uca u
   ||||||| ||||||||||||| |||      |||  
   ggacucu auuauuaacggga uaa      agu a
ugu       u             a   cauuug   a 


mirna_id: sma-let-7
hairpin:
--     -- G     C            gcuu   a 
  ugGGA  G UAGUU GUUGUGUGGUuu    guc a
  |||||  | ||||| ||||||||||||    ||| a
  acccu  c gucag caacauaccaga    uag a
uu     uu g     c            aaau   u 


mirna_id: sma-mir-71a
hairpin:
u     a  ag     U     A  AU  U          c 
 gugau cu  ugcug GAAAG CG  GG AGUGAGAugc g
 ||||| ||  ||||| ||||| ||  || |||||||||| a
 cacua ga  auggc cuuuc gc  cc ucgcucuacg u
g     a  --     c     c  -c  u          u 


mirna_id: sma-bantam
hairpin:
-  c  gu       u      c   g   aa  u 
 gg aa  cggcuuu auugcg ucu aga  au u
 || ||  ||||||| |||||| ||| |||  || a
 cc uu  GUCGAAA UAGCGC AGA Ucu  ug u
a  u  UG       U      U   G   ac  u 


mirna_id: sma-mir-125a
hairpin:
-  -UC      A C     AU     -----      -    a 
 gc   CCUGAG C CUUUG  UGCCu     uguuau uaca u
 ||   |||||| | |||||  |||||     |||||| ||||  
 cg   ggacuc g gaaac  acgga     acaaua augu a
a  uau      a u     cg     cuagu      c    c 


mirna_id: sma-mir-125b
hairpin:
-aUC       C              uuu    u   aa 
    CCUGAGA UGAUAAUUGCUCuu   auca gau  g
    ||||||| ||||||||||||||   |||| |||   
    ggacucu auuauuaacgagag   uagu uug  g
augu       c              ---    -   ag 


mirna_id: ssc-mir-101-1
hairpin:
gac  -a  ug  c                    c a    guaua 
   ug  ac  uc uuuuucgguuaucaugguac g ugcu     u
   ||  ||  || |||||||||||||||||||| | ||||      
   ac  ug  gg aagAAGUCAAUAGUGUCAUG C AUgg     c
-cu  cg  gu  u                    A -    aaagu 


mirna_id: ssc-mir-101-2
hairpin:
       cuggc                  a    gucca 
ggcugcc     ucaguuaucacagugcug ugcu     u
|||||||     |||||||||||||||||| ||||      
ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
       uaggA                  -    aaauc 


mirna_id: ssc-mir-124a-1
hairpin:
     ac   ------a      c  cc        a   ga        uaau 
ucaag  cag       cucugc cu  guguucac gcg  ccuugauu    g
|||||  |||       |||||| ||  |||||||| |||  ||||||||    u
aguuc  guc       gaggcg ga  CGUAAGUG CGC  GGAAUuaa    c
     ac   ggcaucc      a  AC        G   AC        caua 


mirna_id: ssc-mir-133a-1
hairpin:
   - accca     uuu    a       AA  U  A        aacug 
cgg g     aaugc   gcua AGCUGGU  AA GG ACCAAAUc     u
||| |     |||||   |||| |||||||  || || ||||||||      
gcc c     uuacg   cgau UCGACCA  UU CC UGGUUuag     u
   g gacag     cgu    G       AC  C  C        guaag 


mirna_id: ssc-mir-1
hairpin:
     -u  c  a   -     gg g                gc     ---   a 
ccggu  ga gu ccu gcuug  g acauacuucuuuaugu  ccaua   ugg c
|||||  || || ||| |||||  | ||||||||||||||||  |||||   ||| c
ggcca  cu ca ggg cggac  u UGUAUGAAGAAAUGUA  GGUau   auc u
     cu  -  a   u     uu A                -A     cga   g 


mirna_id: ssc-mir-450a
hairpin:
      caa  aaa     u      -  UU     U              cag 
gucugu   ag   gaugc aaacug gU  UGCGA GUGUUCCUAAUAUg   u
||||||   ||   ||||| |||||| ||  ||||| ||||||||||||||   a
uagaca   uc   cuaug uuuggu cg  acguu uacgaggguuauau   u
      -ua  --a     u      a  -u     u              aaa 


mirna_id: ssc-mir-503
hairpin:
      - -----a       g     UA                 G   u gg g 
gccccg c      cucagcc ugccc  GCAGCGGGAACAGUACU CAG g  c a
|||||| |      ||||||| |||||  ||||||||||||||||| ||| |  | u
cggggc g      gggucgg acggg  cgucgucuuuguuaugg guc c  g c
      c cccuca       a     cc                 g   u au g 


mirna_id: ssc-mir-146b
hairpin:
ga   u    -  -  u   u  G        A    A    Cu  ga  u 
  acu uggc ca cc ggc cU AGAACUGA UUCC UAGG  gu  gc c
  ||| |||| || || ||| || |||||||| |||| ||||  ||  ||  
  uga aucg gu gg ccg gg ucuugacu aagg aucc  ua  cg u
-c   u    u  c  c   u  -        c    -    cg  aa  a 


mirna_id: ssc-mir-181a-1
hairpin:
     ua  -     -  uc  u A   U      CU       A    g  au 
gaguu  ga gguug cu  ag g ACA UCAACG  GUCGGUG GUUu ga  u
|||||  || ||||| ||  || | ||| ||||||  ||||||| |||| ||  c
cucga  cu ccaac gg  uc c ugu aguugc  cagcuac caaa cu  a
     --  a     c  ua  c a   u      --       -    a  aa 


mirna_id: ssc-mir-215
hairpin:
-ag   u           a A  A     -   U         -  gug 
   aga gguguacagga a UG CCUAU GAA UGACAGACa au   g
   ||| ||||||||||| | || ||||| ||| ||||||||| ||    
   ucu cuauaugucuu u ac ggaug cuu acugucugu ua   c
ucg   -           a a  c     u   u         c  aau 


mirna_id: ssc-mir-30a
hairpin:
   --c    ----a    ga                UC           -  gagg 
ucc   ugcg     cagu  gcggcUGUAAACAUCC  GACUGGAAGcu gu    c
|||   ||||     ||||  ||||||||||||||||  ||||||||||| ||     
agg   acgc     guca  cgcCGACGUUUGUAGG  CUGACUUUCgg ca    u
   acu    ccucc    gc                --           g  gaag 


mirna_id: bfl-mir-135b-1
hairpin:
ccg            UU    CUU      -   cu 
   uguccAAUGGCU  CAUC   UGUGAa ugu  g
   ||||||||||||  ||||   |||||| |||   
   acagguuauugg  guag   acacuu aca  a
aga            gg    -uc      g   cg 


mirna_id: hsv2-mir-H3
hairpin:
   ga -ga    g  -                   -         c  acg 
agc  g   cgcg cc ggcgcgcucucgaccgcgg uucccgagu gu   c
|||  |   |||| || ||||||||||||||||||| ||||||||| ||    
ucg  c   gcgc gg ccgcgcGAGGGUUGGCGUC GAGGGUUUa ca   a
   -g acg    g  g                   U         c  ggg 


mirna_id: hsv2-mir-H4
hairpin:
        a      A  C    C     C  --   u 
ggggcggg GAGUUC CU GGCA GCAUG ac  gug a
|||||||| |||||| || |||| ||||| ||  |||  
cccugccc CUCAAG GA CCGU CGUGC ug  cgc a
        a      C  U    U     C  ac   c 


mirna_id: hsv2-mir-H2
hairpin:
u         c  -   -   c      cu ug u 
 cggucgcgc ug ccc ggc cagacu  g  c u
 ||||||||| || ||| ||| ||||||  |  |  
 gccAGCGCG AC GGG CCG GUCUgg  u  g g
g         U  U   U   A      -c gu g 


mirna_id: mdm-MIR482a
hairpin:
    --a            gauu     u          u           -U            rgaaaa        au 
gaga   gagggaaaggga    ggagc gcuggaaguu uAGGAAUGGGC  GUUUGGGAAGAa      uuacaaga  a
||||   ||||||||||||    ||||| |||||||||| |||||||||||  ||||||||||||      ||||||||  a
cucu   uucccuuucccu    ccuug cgaccuuuag AUCCUUACCCG  CGAACCCUUcuu      gguguucu  u
    aug            ----     u          u           CC            ---ugg        gu 


mirna_id: mtr-MIR159a
hairpin:
------- gg                      uau    cuu    -u u      a   g     c      uc  u   cu     -  ucuu 
       g  guggagcuuccuuuaguccaaa   ggau   gcua  g ugauag gcu cuuag uauggg  cc caa  cuacc ca    g
       |  ||||||||||||||||||||||   ||||   ||||  | |||||| ||| ||||| ||||||  || |||  ||||| ||     
       c  cAUCUCGAGGGAAGUUAGGUUU   ucua   ugau  c acuauu cga ggauc auaccu  gg guu  gaugg gu    u
ucucguu ua                      cuu    auu    uu c      c   g     u      uc  u   uu     u  uucu 


mirna_id: gma-MIR2119
hairpin:
    u          u    uaauu         c   a    u           -       uagaaa 
auac ucauuuuuua acuu     uccucuaua cuc cuuu auuggagaaaa aagagaa      a
|||| |||||||||| ||||     ||||||||| ||| |||| ||||||||||| |||||||      u
ugug gguaaaagau ugaA     AGGGGAUGU GAG GAAA Uaacuuuuuuu uucucuu      a
    c          u    -----         U   G    C           c       uaggug 


mirna_id: mtr-MIR2119
hairpin:
uuuauu           aaga      c                 aa    ag     -caa   gg 
      uuuuuuacacu    uacucc uacuuuccuuugauugg  auaa  agaga    aaa  u
      |||||||||||    |||||| |||||||||||||||||  ||||  |||||    |||   
      gaaaaaugugg    AUGAGG GUGGAGGGAAACUaacu  uauu  ucucu    uuu  a
--aaau           ---G      U                 -g    cu     uuaa   aa 


mirna_id: pvu-MIR2118
hairpin:
-------------aa     u        g       a        -           -uaa     ug 
               gagcu gaggaagu augggag uggguggg uugguaaaaca    gagaa  a
               ||||| |||||||| ||||||| |||||||| |||||||||||    |||||  a
               cuugg uuccuuua uAUCCUU ACCCACCU AGCCGUUuugu    cucuu  u
ucucaccuuucuuuc     u        g       -        U           cuca     ua 


mirna_id: pvu-MIR159a
hairpin:
            ga       uu      cu    ----   ug   u     g     c      uc      uu     -  ucag 
guggagcuccuu  aguccaa  gaggau  uacu    ggg  gau gagcu cuuag uaugga  ccacag  cuacc ca    c
||||||||||||  |||||||  ||||||  ||||    |||  ||| ||||| ||||| ||||||  ||||||  ||||| ||    a
cAUCUCGAGGGA  UUAGGUU  uuccua  auga    ucc  cua UUCGA GGGUC AUACCU  gguguu  gaugg gu    u
            AG       Uc      cu    uauc   gu   C     G     U      UC      cu     u  uuug 


mirna_id: pvu-MIR1514a
hairpin:
-          g ------    c  a     u  cu   ucc   ug  ug       ggcuu    -               A        -------------     ac 
 auugaagaac c      cuug cu ccuuc ca  gca   uuu  aa  gaaacag     uccu guuUUCAUUUUGAAA UAGGCAUU             Gcauu  a
 |||||||||| |      |||| || ||||| ||  |||   |||  ||  |||||||     |||| ||||||||||||||| ||||||||             |||||  u
 uaacuucuug g      gaau ga ggaag gu  ugu   aaa  uu  uuuuguc     agga caaaaguagaauuuu auccguaa             cguag  u
u          a cccuca    a  a     u  --   --c   gu  gu       -acau    a               -        ccuuaaccuucug     cu 


mirna_id: pvu-MIR482
hairpin:
    ucc    auu    ca      au ug           -U          C   -gu    ugg 
ggga   ggag   ggag  aucaga  u  ugGGAAUGGGC  GAUUGGGAAG Aau   gugc   u
||||   ||||   ||||  ||||||  |  |||||||||||  |||||||||| |||   ||||   g
uccu   ccuu   ucuu  uagucu  a  auCCUUACCCG  UUAACCCUUC uua   uacg   c
    -uu    ---    ag      cu gu           CC          U   auu    uaa 


mirna_id: pvu-MIR2119
hairpin:
agcaaugguguuauuuuuauacuuuauuuucuaugcuuu                  uauu     uaaau        uu      c   gauu 
                                       uccucuacaacucucuuu    uugga     gaagugga  ucuacu uuu    g
                                       ||||||||||||||||||    |||||     ||||||||  |||||| |||     
                                       AGGGGAUGUUGAGGGAAA    aacuu     uuuuaucu  agguga aaa    g
--------------------------------------A                  --CU     ----u        uu      a   aaga 


mirna_id: pvu-MIR166a
hairpin:
                                                                                                                                                                                                                                uucUCG     GGCU   UUCC   cac    cuuuu cu  uuuucuuuc  ucgu   ucuu cauauuu gca  ugc                                                                                                                     u
                                                                                                                                                                                                                                ||||||     ||||   ||||   |||    ||||| ||  |||||||||  ||||   |||| ||||||| |||  |||                                                                                                                      
                                                                                                                                                                                                                                aagagc     uuga   aagg   gug    gaaga ga  agaagaaag  agua   agaa guguaaa cgu  acg                                                                                                                     u
------------------------------------------------------------------------------------------------------------------------------------------------------------------uucucagugucugagucuguguaucuuagggaucgaacgaucgaagaggacuaagagugaag      ---aa    --c    -uc   aaga     -  ag         ua    aug    a       u   au   aagagucguugaaagucgccgaucacucacguacggaaguugugagcagugacaguaaagugacuucauguaaguaagucuacaacuacuuuuacuaccguucggaaaaaggguuca 


mirna_id: pvu-MIR319c
hairpin:
                                                                                                                                                                                                                                                                                                               gaaggagcuucc ucag cca  uuca gga     aaga  gggu  c                                                 c
                                                                                                                                                                                                                                                                                                               |||||||||||| |||| |||  |||| |||     ||||  ||||  |                                                  
                                                                                                                                                                                                                                                                                                               cUUCCUCGAGGG AGUC GGU  gagu ucu     uucu  ccca  g                                                 u


mirna_id: pvu-MIR399a
hairpin:
-ugcacaagauauuauagucaauaa   a  c g  a   g          gu   c  ga     -    ac    ucaugaaauaucuUGCCAAAGGAGAGUUGCCCUGu 
                         gca ac a uu uag gcuucucuuu  ugg ag  aauga caug  cacu                                   u
                         ||| || | || ||| ||||||||||  ||| ||  ||||| ||||  ||||                                   g
                         cgu ug u aa guc cgaagagaag  acc uc  uuacu guau  guga                                   c
cuacuucaguaaacaaacuagggaa   a  a g  -   a          uu   -  ac     a    ac    cuuaucguaucuucuaauguauaauucgauuucgu 


mirna_id: vun-MIR1507b
hairpin:
  a ua    g    -                  a     aaacgccuuuc       
gu g  uuug caga gguguauggagugagaga gggaa           ccgauc 
|| |  |||| |||| |||||||||||||||||| |||||           ||||| u
cg u  aagc GUCU CUACAUACCUUACUCUcu ccuuu           ggcuac 
  a gc    a    G                  -     ----cuuucuu       


mirna_id: osa-MIR2120
hairpin:
--                   ---a    gaua    u 
  aacaaccgggacuaaagau    ucuu    ucuu a
  |||||||||||||||||||    ||||    |||| a
  UUGUUGGCCCUGAUUUCUA    agaa    aggg c
uC                   GAAA    -aug    c 


mirna_id: osa-MIR2121a
hairpin:
--        cu                     aacacagccgcggccuuaggcuguguu 
  gugcuaau  aucgcuccguuuuccgugcgg                           c
  ||||||||  |||||||||||||||||||||                            
  CGCGAUUA  UGGCGAGGCAAAAggcacguc                           c
uG        CC                     cccuuuacucaaggguagaccaucuac 


mirna_id: osa-MIR2121b
hairpin:
--        aag       a    g      u  ------     uu   gaaccuccugucuaaccaacccaaaauuggguuggccacgu 
  gcgcuaau   ucguuuc uuuu cgugcg ga      gaguu  caa                                         a
  ||||||||   ||||||| |||| |||||| ||      |||||  |||                                          
  CGCGAUUA   GGCGAGG AAAA gcacgc cu      cucaa  guu                                         u
uG        CCU       C    g      -  cccuua     gg   gcguguauuuacuuacguagaguguguguguaggaaccuga 


mirna_id: osa-MIR2122
hairpin:
UUUC      A   -             a         a                         -cacguca  u           ucgugccaccgugaauagga 
    AAAAAU ACC UUUUGUUCagcgc aaaucguau gcgcugaacuuagacaccucagcgc        ac ggcgcugaaug                    g
    |||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||||||||        || |||||||||||                    g
    uuuuua ugg aaaacaagucgcg uuuaguaua cgugauuugaaucuguggagucgcg        ug cugcgacuuac                    c
aaau      a   u             g         c                         auuuaucg  -           auguaaccgugcgacugagu 


mirna_id: gma-MIR167e
hairpin:
      -a  ----     c  u           G        Uaa   c  u ac 
ucaugc  cc    acuac ag UGAAGCUGCCA CAUGAUCU   cuu cc c  u
||||||  ||    ||||| || ||||||||||| ||||||||   ||| || |  u
aguacg  gg    ugaug uc acuuugacggu guacuaga   gaa gg g  g
      cc  ucgu     a  c           -        cua   a  u cc 


mirna_id: gma-MIR167f
hairpin:
      -a  ----     c  u           G        Uaa   c  u  c 
ucaugc  cc    acuac ag UGAAGCUGCCA CAUGAUCU   cuu cc ca u
||||||  ||    ||||| || ||||||||||| ||||||||   ||| || || u
aguacg  gg    ugaug uc acuuugacggu guacuaga   gaa gg gu g
      cc  uugu     a  c           -        cua   a  u  c 


mirna_id: gma-MIR172c
hairpin:
aaauc     cugu    c g  g                a  -   uuu      au     -ug    ag ug  u 
     aguca    uugc g ug agcaucaucaagauuc ca agc   aggggc  uaauu   uuug  g  gu c
     |||||    |||| | || |||||||||||||||| || |||   ||||||  |||||   ||||  |  || c
     ucagu    aacg c AC UCGUAGUAGUUCUAAG gu ucg   uucccg  auuaa   aaac  c  ua u
-auaa     aaau    a G  G                G  a   -uu      --     cca    cu gu  u 


mirna_id: gma-MIR172d
hairpin:
aaaac     cug     aga  g                a  agcu    -      --  ug      - ug  c 
     agucg   auugc   ug agcaucaucaagauuc ca    ucag ggguuu  uu  uuuggg g  gu c
     |||||   |||||   || |||||||||||||||| ||    |||| ||||||  ||  |||||| |  || c
     ucagc   uaacG   AC UCGUAGUAGUUCUAAG gu    aguu cccgaa  aa  aaaccc c  ua u
-acaa     aaa     ACG  G                G  --au    u      uu  gu      u gu  u 


mirna_id: gma-MIR172e
hairpin:
aaaac     cugu    c g  g                a  -   uuu       au     u     a   g ucc 
     aguca    uugc g ug agcaucaucaagauuc ca agc   agggggc  uaauu guuug ggu g   c
     |||||    |||| | || |||||||||||||||| || |||   |||||||  ||||| ||||| ||| |    
     ucagu    aacG C AC UCGUAGUAGUUCUAAG gu ucg   uuucccg  auuaa caaac cua u   u
-auaa     aaau    A G  G                G  a   --u       --     c     -   g uau 


mirna_id: gma-MIR1509b
hairpin:
cu    c                U      U  gugu         aaag   cuuc 
  gcau uuuUUAAUCAAGGAAA CACGGU ga    gaaggagag    ugg    a
  |||| |||||||||||||||| |||||| ||    |||||||||    |||     
  ugua agaaauugguuccuuu guguca cu    cuuccuuuu    gcc    g
cg    u                -      c  ----         --gg   uuua 


mirna_id: gga-mir-2126
hairpin:
-    -c      cc  ca    gugg         g   ugA    C  -   A     Acggag           - c 
 gggg  gggcug  gg  ggau    gccgggacg agc   GCGG GC GGU GGAGC      cggagguggug c a
 ||||  ||||||  ||  ||||    ||||||||| |||   |||| || ||| |||||      ||||||||||| |  
 cccc  cccgac  uc  ccua    ugguccugc ucg   uguc cg cca ccuug      gucuccgccau g c
c    ac      --  --    ---a         -   ---    -  a   a     gaagga           u g 


mirna_id: gga-mir-2127
hairpin:
          ccgg       -  g          uug   g         a  a 
ccuccuuguc    cucgucc cc cuuccucccu   ucu cggccgccg ac g
||||||||||    ||||||| || ||||||||||   ||| ||||||||| || g
ggagggacgg    gagcGGG GG GAGGGAGGGG   AGG GCcggcggu ug c
          ---a       C  -          ---   -         g  c 


mirna_id: gga-mir-2128
hairpin:
u       -u     -   g      -   cc 
 gugggga  gggcg cac gcacgg ggu  g
 |||||||  ||||| ||| |||||| |||  u
 cgCCCCU  UCUGC GUG CGUgcc cca  c
a       UC     A   A      g   cc 


mirna_id: gga-mir-2129
hairpin:
-  ga     g ag  gg      a    gaua    ag       
 gg  aggcu c  ug  acaagg ccag    cugc  ugcugu 
 ||  ||||| |  ||  |||||| ||||    ||||  ||||| g
 cc  uccga g  GC  UGUUUC GGUC    GACG  ACgaca 
c  ac     - gA  AU      -    --AG    --       


mirna_id: gga-mir-2130
hairpin:
    c     -  a   aac      ug   au 
gucc ugcag gc cca   gggggc  agc  c
|||| ||||| || |||   ||||||  |||  g
CAGG ACGUC CG GGU   CCCUcg  ucg  g
    A     U  A   -GA      --   ac 


mirna_id: gga-mir-2131
hairpin:
   c ug        G      UGC    A       guuu   au 
ucu g  gcuuccAU CAGAAG   ACGG AACAGCU    gcu  c
||| |  |||||||| ||||||   |||| |||||||    |||  g
agg c  cggaggua gucuuc   uguc uugucgg    uga  a
   u gu        -      --u    a       ---u   aa 


mirna_id: mmu-mir-2136
hairpin:
---      auc       g g    --    -ga  uuu 
   ccgcgu   cagucag a ucag  uuag   ag   u
   ||||||   ||||||| | ||||  ||||   ||    
   gGUGUA   GUCAGUU U GGUC  aauu   uc   a
ggu      -GA       G G    uu    aag  uga 


mirna_id: mmu-mir-2137
hairpin:
gua   uac   --       cu  -        c 
   gua   cuc  cuuccug  gc cuuguugg u
   |||   |||  |||||||  || ||||||||  
   cgu   gag  GAGGGAC  CG GGGCGGCC u
---   uac   au       CC  A        G 


mirna_id: mmu-mir-2139
hairpin:
ag   ga    agg       cu   auuuggacau        --c     ag 
  aag  gcag   gccagga  ggc          gcagcugc   cagca  g
  |||  ||||   |||||||  |||          ||||||||   |||||   
  uuc  CGUC   UGGUCCU  UCG          CGUCGAcg   gucgu  u
--   gg    -AA       CG   ----------        ccu     gg 


mirna_id: sme-mir-10a
hairpin:
--uaauuu     c         -A     U    C      A  Ug 
        guuuc uugauauaA  CCCUG AGAU CGAGUU GA  g
        ||||| |||||||||  ||||| |||| |||||| ||  u
        uagag aauuauaUU  GGGGC UCUA GCUUAA cu  u
ucuucuau     u         AA     -    A      C  uu 


mirna_id: sme-mir-2148
hairpin:
- u    -aacca     -uc         C     U  UGAU     au 
 g aagu      guuua   agAGAAAUU UGUGG CU    Uguaa  g
 | ||||      |||||   ||||||||| ||||| ||    |||||   
 c uuca      caaau   UUUCUUUAA ACACC GG    AUAuu  a
a -    aguuug     uau         A     C  --UC     au 


mirna_id: sme-let-7d
hairpin:
---cuuccua  u      uac                         uuu 
          ua ucauuu   uAGAGGUAGUGAUUCAAAAAGUUaa   a
          || ||||||   |||||||||||||||||||||||||   a
          gu aguaaa   guuucuauuauuaaguuuuucaguu   c
acuacagaaa  u      -ua                         uua 


mirna_id: sme-mir-753b
hairpin:
--uuuuuau    cauau      -        U           u 
         aaag     uuuaAG GCUUGAAU GUGAUCUCAua a
         ||||     |||||| |||||||| |||||||||||  
         uuuc     aaAUUC CGAACUUG UACUAGAGUau u
guuacuacu    auaau      U        U           u 


mirna_id: sme-mir-61b
hairpin:
----caaa    cg   ac  a     UC   -U        A       g 
        gcgg  auu  ac gAAGA  GUG  CGUUCUAG UUAcaug a
        ||||  |||  || |||||  |||  |||||||| |||||||  
        cgcc  uaa  ug UUUCU  CAC  GUAAGAUC AGUguau u
ucuacuag    --   ga  a     UC   UU        -       a 


mirna_id: sme-mir-87c
hairpin:
----guucuc   u    uc c              GG  CC  gc     c 
          ggc cgug  g aGUCAAUUGAUAAU  GC  CA  cauuc a
          ||| ||||  | ||||||||||||||  ||  ||  ||||| g
          ccg guac  u UCAGUUAACUAUUA  CG  GU  guaag g
ucuacuguua   -    cu -              AA  -A  -A     c 


mirna_id: sme-mir-2149
hairpin:
-gca      c  -a      c  C     -    A          ---a     
    gaagau aa  ugagua CG CAAUG ACAA CUGUUGAUga    gacu 
    |||||| ||  |||||| || ||||| |||| ||||||||||    ||| u
    cuuuug uu  auuuaU GC GUUAC UGUU GACGACUAuu    cugu 
gcua      c  cc      U  A     C    -          aaca     


mirna_id: sme-mir-2147a
hairpin:
---ucuucu     ugc     - C    G       C    Cau  cuaa 
         uugga   caacg g GGAA ACUCGCA GUGA   ug    u
         |||||   ||||| | |||| ||||||| ||||   ||    u
         aaccu   guugc c ccuu ugagcgu cacu   ac    u
acuacucuu     -ua     g -    g       -    -uu  cuuu 


mirna_id: sme-mir-2150
hairpin:
--------ucaaa    acuuc  uauuC                    cagcg     gc  u       a 
             ucgg     uc     GGUUACGUGAUUAUUAGGGG     gcuuc  ug cugguga c
             ||||     ||     ||||||||||||||||||||     |||||  || |||||||  
             agcc     ag     ccaguguacugaugauuccu     ugaag  ac gaucacu u
cuucuuuaacgua    -----  -uacu                    -----     -a  -       g 


mirna_id: sme-mir-2151
hairpin:
u   --ua      cu  uuaCA         A    G      A 
 gcu    agagaa  cu     GAUCAUGUU AGUG AAUUUG U
 |||    ||||||  ||     ||||||||| |||| ||||||  
 cga    ucucuu  ga     CUGGUAUAA UCAC UUAGac a
a   caac      uc  uUAGA         C    G      a 


mirna_id: sme-mir-2152
hairpin:
--cuuauu    aacu   aa  GG     A          CU 
        cuca    uua  uG  UUCGA GUAUGUCUCU  U
        ||||    |||  ||  ||||| ||||||||||  U
        gagu    agu  gc  aagcu uauauagagg  a
uuuuuacc    gauc   aa  au     a          uu 


mirna_id: sme-mir-2153
hairpin:
uaaauuacggau  ug  --u       -CAUA      U     CUucua   --a     au 
            uu  au   aggUAGG     GUCUGU GGUUA      uga   auuga  u
            ||  ||   |||||||     |||||| |||||      |||   |||||   
            aa  ua   uccaucc     caggua ccagu      acu   uaacu  u
gcuuuauaaagu  gu  uuu       cagcg      -     --uccc   aaa     ag 


mirna_id: sme-mir-87d
hairpin:
--uuacauu          uau         U        -    ---        
         guuuuagaau   AAUGUCUUA AUUUUGCU AUUA   UCauugu 
         ||||||||||   ||||||||| |||||||| ||||   |||||| u
         uaaaguuuua   UUACAGAAU UGAAACGA UGgu   aguaacu 
uccuucuuu          uaC         U        G    aaa        


mirna_id: sme-mir-754b-1
hairpin:
--guuuaucauc    - a c          GG    UU C      u 
            cacc c g auGUUGCUUG  GGUA  A UAuauu a
            |||| | | ||||||||||  ||||  | ||||||  
            gugg g c UAUAACGAAC  CUAU  U Auauaa u
ucaacuuauaaa    a a -          UA    UU A      u 


mirna_id: sme-mir-754c-1
hairpin:
--auuuguca      - a c           -    UU        u 
          uccacc c g auGUUGCUUGG GGUA  ACUAUauu a
          |||||| | | ||||||||||| ||||  ||||||||  
          aggugg G C UAUAACGAACU CUAU  Ugauauaa u
acaacuuaua      a G -           U    UU        u 


mirna_id: sme-mir-124d
hairpin:
------uu   auau          AA       AA   A         a a 
        gga    guuuuaauaa  CAUUUAC  GCG GCCUUAAUu g a
        |||    ||||||||||  |||||||  ||| ||||||||| |  
        ccu    uaaaguuguU  GUGAAUG  CGC CGGAAUuaa c u
ucuacuau   ----          GG       -G   A         - u 


mirna_id: sme-mir-124e
hairpin:
-----uuc      uu     ac  C     U    U GA         u 
        aauaaa  auucu  uG CAUUC CAGU G  GUCUUgaua g
        ||||||  |||||  || ||||| |||| |  ||||||||| a
        uuauuu  uaagg  AC GUAAG GUCG C  CGGAAUuau u
ucuucucu      --     -a  C     U    - -A         c 


mirna_id: sme-mir-8b
hairpin:
-ugcauuc         a  -uGC                AG      a 
        auucuaaua uu    UUCUUACUUGAUGGUA  AGAcag u
        ||||||||| ||    ||||||||||||||||  ||||||  
        uaagauuau ag    AAGAAUGGACUGUCAU  Uuuguu u
gcuucuau         c  UCAU                AA      u 


mirna_id: sme-mir-1993
hairpin:
---uuaaccu  g   u      G      C          AA     guaca 
          uc aua guaauU AUGAAU AACAGUAUAA  ACGga     a
          || ||| |||||| |||||| ||||||||||  |||||      
          ag uau cauugA UACUUA UUGUCGUAUU  Ugcuu     c
gcugcuauuu  g   -      G      -          -A     auaaa 


mirna_id: sme-mir-36b
hairpin:
uuuuuua    --       -cuG          -       -     Cuag 
       acag  ucuaacu    GAUUGAUGUU AUUCGGU AUGAU    a
       ||||  |||||||    |||||||||| ||||||| |||||    a
       uguc  agauuga    CUAAUUACAG UGGGCCA Uauua    u
-uccuga    ug       cGUA          A       C     aaaa 


mirna_id: sme-mir-1992
hairpin:
----uu        aag        --UU           U     gaa 
      augaaaua   aauUUGUC    GAACAACUGCU AUgau   a
      ||||||||   ||||||||    ||||||||||| |||||    
      uacuuuau   uugaaCAG    CUUGUUGACGA Uacug   a
uauagu        --a        UUAC           C     uaa 


mirna_id: sme-mir-2154-1
hairpin:
----uucg      uauu     uUC          UU   A      a     aau 
        agugau    agaau   AGCUGUACAA  GGC UUGUGU ugaua   g
        ||||||    |||||   ||||||||||  ||| |||||| |||||    
        ucacua    uuuua   UCGAUAUGUU  CUG AACAca auuau   a
ccaccuaa      --uu     UAU          -U   -      -     aua 


mirna_id: sme-mir-216
hairpin:
--ccuguc       ag    C    -    CC     A       --     a 
        augauuu  caag AAUC UCAG  UGUUA UAGGAGU  Uugga a
        |||||||  |||| |||| ||||  ||||| |||||||  |||||  
        uacuaaa  guuC UUAG AGUC  GCAAU AUCCUCa  aauuu u
aaccauuu       cu    A    U    -U     -       ua     g 


mirna_id: sme-mir-2156a
hairpin:
-uuuuuca    a      -ua        -U     A   C   aaua 
        aguc ugaaaa   AAAAGUUU  GGGUC UAA AUA    a
        |||| ||||||   ||||||||  ||||| ||| |||    u
        uuag acuuuu   UUUUCAAA  CCCGG AUU Uau    u
acgacauc    a      uAC        UC     C   C   aauu 


mirna_id: sme-mir-9b
hairpin:
---acaaaug        a   uU          U   C       aug 
          ucaaauca gau  CUUUGGUUGU UAG UAUAUGA   u
          |||||||| |||  |||||||||| ||| |||||||   c
          aguuuagu cuG  GAAACUAAUA GUC AUAUACu   u
ccuucgaaug        -   UU          C   -       gga 


mirna_id: sme-mir-9a
hairpin:
--u  u   --au   c       UCU     UU     C   A     g   aa 
   ug uua    uga uauaugg   UUGGU  UCUAG UGU UGAUu uaa  u
   || |||    ||| |||||||   |||||  ||||| ||| ||||| |||   
   ac agu    auu auauaCU   AACCA  AGAUC ACA ACuaa guu  u
ucu  u   guau   -       -UU     UU     -   C     a   gu 


mirna_id: sme-mir-1175
hairpin:
--uauu           auG   -    AU      A       -    aa 
      aaaauucuaaa   AGU GGAG  GUUGAA UUCAAAa aaau  u
      |||||||||||   ||| ||||  |||||| ||||||| ||||   
      uuuuaggguuu   UCA CCUC  CAACUU GAGUuuu uuug  u
ucaaac           -aa   U    CU      A       a    cu 


mirna_id: sme-mir-2157
hairpin:
------   a   u  agucaaau        UUG          C  -  g 
      uua agg gc        uuUGAGUA   CAUCAAGAAC GA au u
      ||| ||| ||        ||||||||   |||||||||| || ||  
      aau ucc cg        aAAUUCAU   GUAGUUUUUG Cu ua u
uucucu   c   u  ----aauu        UAA          A  a  a 


mirna_id: sme-mir-2158
hairpin:
-  aa     u   -aau    UG         U   A       c  a   u 
 gg  aguaa uuu    auuu  AGUAUUUUU CGU UACCGAa ag uca c
 ||  ||||| |||    ||||  ||||||||| ||| ||||||| || |||  
 cu  uuauu aaa    uaAG  UCAUAAGAA GCA AUGGCUu uc agu g
g  gc     u   gagu    GU         -   -       -  -   u 


mirna_id: sme-mir-2159
hairpin:
-a   -ca         a   cU       C    A     ug     ag 
  aug   aaugaauuc aaa  GCCUUUU UUUG GUAGC  uccgc  a
  |||   ||||||||| |||  ||||||| |||| |||||  |||||   
  ugc   uuacuuaag uuU  UGGGAAA AAAC CGUCG  AGGug  c
aa   uac         g   AG       U    -     --     ga 


mirna_id: sme-mir-7d
hairpin:
-----aaaa       aacaauc          U  U   UU       ugcga      a      a 
         acuauaa       cuUGGAAGAC AG AAU  UGUUGUa     aauuuu ucagac u
         |||||||       |||||||||| || |||  |||||||     |||||| |||||| u
         ugauauu       gAACCUUUUG UC UUA  ACAACau     uuagga aguuug c
gcaacuaac       ---caaa          -  U   UU       -----      g      a 


mirna_id: sme-mir-2160-1
hairpin:
-aaaauc        -uaaauaU   G        U          guacua 
       uuugugau        GGC CUUAUGUG AGAACCGGuu      u
       ||||||||        ||| |||||||| ||||||||||       
       aaacacua        CCG GAAUGUAC UUUUggucaa      a
cuacuaa        ugauAAAC   A        U          auuuuu 


mirna_id: sme-mir-2161
hairpin:
--uuuuccu   u     a a        U                 cuu  u 
         uug cugua u GUAUCUUU UUAUUACGUACAAAaug   gc u
         ||| ||||| | |||||||| |||||||||||||||||   ||  
         aac gauau a UAUGGAGA AAUGAUGCGUGUuuuac   ug a
cugcuauuu   u     a C        U                 agu  g 


mirna_id: sme-mir-2162
hairpin:
---  gcgu  u  a    -gu      CU          U    -cu u 
   ug    ag cu uggu   auUGUG  UAUUUGUAUA UGCa   g u
   ||    || || ||||   ||||||  |||||||||| ||||   | a
   ac    uc ga acca   UAACAC  AUAAACGUAU AUGu   c a
ccu  aaau  -  -    guu      UU          U    uuu u 


mirna_id: sme-mir-2163
hairpin:
auu    --  uu       -ca             A      UCa       uug 
   acga  ga  uuauuuu   UAACUUGAUAGAU UAUGCA   acgagau   c
   ||||  ||  |||||||   ||||||||||||| ||||||   |||||||    
   ugcu  uu  aguaaag   GUUGAAUUAUCUG AUACGU   Uguuuua   u
-ac    aa  uu       cUG             -      ---       uua 


mirna_id: sme-mir-133a
hairpin:
---aaucgca       u          -      AA U      A     aaaug 
          guauauu auagCAGCUG UUGACG  G AUCAAA uaguu     a
          ||||||| |||||||||| ||||||  | |||||| |||||     u
          cauguaa uauUGUCGAC AACUGC  C UGGUUu auuaa     g
ccuacaauua       -          C      CC -      -     auaua 


mirna_id: sme-mir-2164
hairpin:
----ccauau     ua   aa            -       -     u a 
          ucagg  aua  aUUAUAUUUGAU UCACGUA GAGAu g g
          |||||  |||  |||||||||||| ||||||| ||||| |  
          agucu  ugu  UAAUAUGAACUA AGUGCGU UUcua c a
ucuacuucuc     --   aa            U       G     u u 


mirna_id: sme-mir-2165
hairpin:
--aaacuuuau     uc   UC      C          C    uguaaauuu u 
           augaa  cga  AUUCUA AGGAUCGAAU AGUu         g a
           |||||  |||  |||||| |||||||||| ||||         |  
           uacuu  guU  UGAGAU UCUUAGCUUA Ucaa         c a
gcuccuuauuu     ua   UA      U          A    cuucucuau a 


mirna_id: sme-mir-36c
hairpin:
aauuuca  -       -  C  -   U    CAA     UU     cga   g 
       ac auaaauu ag GA UGA UGUC   CUGGU  ggugu   guu a
       || ||||||| || || ||| ||||   |||||  |||||   |||  
       ug uauuuaa uc cU ACU ACAG   GGCCA  CUacg   uaa a
cucuaac  c       a  u  U   U    AUG     --     ---   a 


mirna_id: sme-mir-96a
hairpin:
---cuucau      auauau        A   A  GA         agu uu   u 
         uugagu      cgUUUGGC CUU AG  AUUGUCACU   g  cuu u
         ||||||      |||||||| ||| ||  |||||||||   |  |||  
         agcuca      GCGAACUG GAA UC  UAACAGUgg   c  gaa u
acuucgcuu      -acuuu        A   A  -A         --- uu   a 


mirna_id: sme-mir-2166
hairpin:
--auaugaaaucuauuuuucucua       a   a a        u   gc 
                        gaauaaa cag u accaauca guu  a
                        ||||||| ||| | |||||||| |||  g
                        CUUAUUU GUU A UGGUUagu uaa  u
cgauaaauuaaaucuaaauaCUCA       C   C C        c   gu 


mirna_id: sme-mir-2167
hairpin:
---ugug    c     uau           a  u    u    u   -a   u 
       aaug aauuc   cuuugaaagac ag cuua acau cuu  gug c
       |||| |||||   ||||||||||| || |||| |||| |||  ||| a
       uugc uuaag   gAGACUUUCUG UC GAAU UGUG gaa  uac a
cugcuaa    -     uac           G  -    -    U   cc   a 


mirna_id: sme-mir-2147b
hairpin:
---ccuucu     uac     gC    A      A    ucc    ca 
         uugga   uaacg  GGAA ACUCGC CGUG   ucgu  a
         |||||   |||||  |||| |||||| ||||   ||||  c
         aaccu   auugc  ccuu ugagcg gcac   agca  u
acagcucuu     -uu     ac    g      -    uuu    cu 


mirna_id: sme-mir-2168
hairpin:
-----a         uuc    g  A          -      A        
      ugccagaaa   ugau cc UAUUCGUUAA GGUUGU ACcagac 
      |||||||||   |||| || |||||||||| |||||| |||||| a
      augguuuuu   acug gG GUAAGCAGUU CCAACA Ugguuuc 
uacuaa         ---    a  A          U      C        


mirna_id: sme-mir-2169
hairpin:
----   uuuuu      ucu   A        AU    U  G   uaa 
    gaa     uaucac   aac ACUUUGAA  UCGA CU AUa   a
    |||     ||||||   ||| ||||||||  |||| || |||    
    cuu     auagug   uUG UGAAAUUU  AGCU GA UAu   a
ccug   --uuu      cuu   G        AU    C  A   uau 


mirna_id: sme-mir-754d
hairpin:
--ac  ugca      - a c                UU        u 
    ga    uucacc c g auGUUGCUUGGGGGUA  AUuauauu a
    ||    |||||| | | ||||||||||||||||  ||||||||  
    cu    aggugg g c uauaacgaacuucuau  ugauauag u
acaa  uaua      a a -                uu        u 


mirna_id: sme-mir-2170
hairpin:
auaaau    -----               u          a     uu 
      ggca     uuauauuuucucuac aaauuucacu ugaau  a
      ||||     ||||||||||||||| |||||||||| |||||  a
      ucgu     aauauaaaAGAGAUG UUUAAAGUGA Acuua  g
---ugu    uaaau               U          C     ug 


mirna_id: sme-mir-2147c
hairpin:
--uuguuuugcuguaa     gC    A  UC  U    C      cg 
                uaacg  GGAA AC  GC CGUG CAUCGU  u
                |||||  |||| ||  || |||| ||||||  c
                auugc  ccuu ug  cg gcac guagca  u
acuccuuuuaacccua     ac    g  ga  -    u      cu 


mirna_id: sme-mir-2171
hairpin:
----gaaaac  aacag    -a   U     AA  C  --U       aug 
          gc     uaca  auG GAUGG  AU GC   AUUUCAa   c
          ||     ||||  ||| |||||  || ||   |||||||    
          cg     augu  uac uugcc  ug cg   uagaguu   u
aaagauaaua  ---ga    ag   -     gg  a  uau       ccc 


mirna_id: sme-mir-2172
hairpin:
-----a    uuu    u    uu  -        A         GG   uu  u 
      auaa   ucca ugau  GG AAAUAAUG CUAUGCAUG  ACA  ag a
      ||||   |||| ||||  || |||||||| |||||||||  |||  || g
      uauu   aggu acug  CC UUUAUUAU GAUAUGUAC  Ugu  uc a
agcgac    --u    u    -U  G        -         -A   --  g 


mirna_id: sme-mir-96b
hairpin:
---uaucaaa     g     aaUUU        A     C     -ca   g 
          caguu ucuga     GGCACUUA GGAAU GUCAC   guu c
          ||||| |||||     |||||||| ||||| |||||   ||| a
          guuag agacU     CUGUGAAU CUUUA CAGug   uag u
ucuacuauug     -     AUUAU        -     -     uua   u 


mirna_id: sme-mir-2173
hairpin:
---acaauucua    u       AA          A     AC     gaaag 
            guaa caaugga  CAACUUGUAU UGCAU  GUAua     a
            |||| |||||||  |||||||||| |||||  |||||      
            uauu guuaCUU  GUUGAAUAUA AUGUA  CAUau     a
agccuacuaaaa    -       AA          C     --     aacaa 


mirna_id: sme-mir-2174
hairpin:
---ucuu   aac        c    a  c    uu   uu     ca 
       ugg   guuaacau ggaa ac cgca  gcg  auugu  a
       |||   |||||||| |||| || ||||  |||  |||||  c
       acc   cgauugua CCUU UG GUGU  CGC  UAaca  c
agcuuuu   -cu        C    G  A    --   UU     cu 


mirna_id: sme-mir-2175
hairpin:
cuau   ua    ---u --a     -       u  a    -        -   c   ac 
    ugg  gcca    g   uguua uuugcaa aa auau caguaaaa uga auu  u
    |||  ||||    |   ||||| ||||||| || |||| |||||||| ||| |||   
    acc  cggu    c   acAGU AAACGUU UU UGUA GUCAUuuu auu uaa  a
-auu   --    ucau gua     U       U  C    A        u   u   ga 


mirna_id: sme-mir-753c
hairpin:
-uuuuaau       -      A         U           u 
        aaaguau auuuaa AGCUUGGAU GUGAUCUCAua a
        ||||||| |||||| ||||||||| |||||||||||  
        uuucaua uaaauu ucgaacuua uacuagaguau u
caacuacu       a      c         u           u 


mirna_id: sme-mir-2176
hairpin:
--    c a                       u       c 
  ugau a aagcaaaaccuuugugaaucgga uguucuu a
  |||| | ||||||||||||||||||||||| ||||||| g
  acua u uucguuuuggaAACACUUAGUCU ACAAGAa u
ac    u c                       U       u 


mirna_id: sme-mir-2177
hairpin:
--aaa   c    ca   ga   -A             U  A      g 
     aau auug  cau  uaC  AGAAAUUCAUUGG UA UUUCau a
     ||| ||||  |||  |||  ||||||||||||| || ||||||  
     uua uaac  gua  aUG  UCUUUAAGUGACC GU AAagua u
uuuac   u    aa   -g   GC             C  A      u 


mirna_id: sme-mir-2178
hairpin:
--uac                 ca       a         c   ucauc 
     gagacauuucaucauug  acauuuc ucauuauag aau     a
     |||||||||||||||||  ||||||| ||||||||| |||      
     cucuguaaaguaguaAC  UGUAAAG AGUAAUauc uua     a
aguaa                 UC       C         -   cacgu 


mirna_id: sme-mir-2179
hairpin:
--caua  -a      uu     U        A      UUUAA       c 
      cu  agucua  uguaU GCAAAAAU UUUAUA     CUCAuuu u
      ||  ||||||  ||||| |||||||| ||||||     |||||||  
      ga  ucggau  acgUA CGUUUUUA AGAUAU     GAguaaa c
acugcc  gg      -u     U        G      ---CA       u 


mirna_id: sme-mir-315
hairpin:
----guu     ag    aua   U      U    CUCU  G     a   aa 
       gagcg  gcuu   gaa UUUGAU GUUG    GA AGUUa uau  u
       |||||  ||||   ||| |||||| ||||    || ||||| |||  u
       uucgu  cgaa   cuU AAACUA CAAC    CU UCAau gua  u
gcuacug     ag    --a   U      C    -AAU  G     a   ac 


mirna_id: sme-mir-2180
hairpin:
-auauauauauauauauac   - -   c   c   a u   gg 
                   caa c ccu auc cau c cau  a
                   ||| | ||| ||| ||| | |||   
                   gUU G GGA UAG GUA G GUa  a
guuauaaaguucauauuaa   C U   A   U   A -   aa 


mirna_id: sme-mir-2181
hairpin:
--ucaa  auu    u   -u  UA      U     GC        ug    a 
      cu   cgau uug  ca  UGCUGU AAUUA  GAUUGGUU  aaag g
      ||   |||| |||  ||  |||||| |||||  ||||||||  |||| u
      ga   gcua aau  gu  acgaca uuaau  cuaaccaa  uuuc u
acuacc  -gu    u   uu  uc      c     -a        --    u 


mirna_id: sme-mir-2155
hairpin:
--uauuugauguaaagu     a  a        u         a 
                 gcauc gg uaagugua agcaguguu a
                 ||||| || |||||||| ||||||||| u
                 cguAG CC AUUCACAU UUGUCACAG u
guaaguuuaaagagacu     C  -        U         u 


mirna_id: mmu-mir-2183
hairpin:
-------au      -       UGACC  -  gc 
         auucUU GAACCCC     UC CU  u
         |||||| |||||||     || ||  u
         uaagaa cuugggg     ag ga  u
uaauacguc      u       ----u  u  ac 


mirna_id: dre-mir-2184
hairpin:
-----------    au  u     aag     AAC        UUU          guu 
           cuga  ga gcccu   cccua   AGUAAGAG   AUGUGCUgag   a
           ||||  || |||||   |||||   ||||||||   ||||||||||    
           ggcu  cu uggga   gggau   ucauucuc   uacacgacuu   a
uuacacugucc    au  u     aaa     -gu        ugu          aaa 


mirna_id: dre-mir-2185-1
hairpin:
ca   uc       -u  -c  c C       GACUC         cgca 
  ggu  ucuggcu  ga  gu c GGUGCAG     CGCGGCUCu    g
  |||  |||||||  ||  || | |||||||     |||||||||    u
  ucg  agaccgg  cu  ca G CCACGUC     GCGCCGaga    g
--   -c       uu  uu  C A       GACUA         cuuu 


mirna_id: dre-mir-429b
hairpin:
ucuauacu  -ag    a    -c     u   u -          a  -     ug ug 
        gc   uaaa uccu  ugauu gug c uuaccaggca gu uuaga  u  a
        ||   |||| ||||  ||||| ||| | |||||||||| || |||||  |  u
        cg   guuu aggg  acuaa UAC G AAUGGUCCGU CA AAUcu  g  a
--------  cua    a    uc     c   C U          -  U     gu uc 


mirna_id: dre-mir-1388
hairpin:
--uga  ga    -    gc    cA  A   U C         A  -  uga 
     ug  ugag cagu  uuuc  GG CUG C AACCUGAGA UG cu   g
     ||  |||| ||||  ||||  || ||| | ||||||||| || ||    
     ac  gcuc guca  aaaG  CC GAC G UUGGACUCU ac gg   u
ccgaa  uc    u    -a    UA  C   U C         A  u  uuu 


mirna_id: dre-mir-1788
hairpin:
ucaaccac      --  a   g            A        C a  uc 
        ugucuu  gu ucc aGGCUUGUUUUA GUUGCCUG G uc  u
        ||||||  || ||| |||||||||||| |||||||| | ||  u
        acagag  cg agg UCUGAACGAAAU CGACGGAC c ag  a
acagcaca      ac  g   G            -        u -  ua 


mirna_id: dre-mir-2187
hairpin:
---uc  a    a          uUUA               --UUUAg      
     ug auug ugauucuggc    AUUAGUAUAGCCUGU       ugauc 
     || |||| ||||||||||    |||||||||||||||       |||| a
     ac uaac auuaagaccG    UAAUCGUAUCGGACA       acuac 
ggugu  g    g          UAUC               UUucuua      


mirna_id: dre-mir-196c
hairpin:
-----------cccgucc     au        U         GA          g u a 
                  agcug  gcgugguu AGGUAGUUU  UGUUGUUGGG u g c
                  |||||  |||||||| |||||||||  |||||||||| | | u
                  uugac  ugcauuag uccgucaaa  acaacagcuc g c u
ugccggaacuacuuccgu     --        u         ga          g u c 


mirna_id: dre-mir-2190-1
hairpin:
gauucaa        -     guC   -        U    U   A      -    c 
       cccggcgg ggcug   GGC CCGUCCGG GCGC CGG Uccccc cccu u
       |||||||| |||||   ||| |||||||| |||| ||| |||||| ||||  
       gggccgcc ccggc   ucg ggcaggcc cgcg gcc aggggg gggg c
-----gc        g     ---   a        -    -   -      a    g 


mirna_id: dre-mir-2191
hairpin:
gugccu   --ucaa        ccu      u  u    a     gu  a      u 
      ugc      gggucuca   cugcca gg auug aggug  ag gagugu u
      |||      ||||||||   |||||| || |||| |||||  || ||||||  
      acg      cucagagu   gACGGU CC UAAC UCCAC  Uc cuuaca g
-----a   uccaaa        cau      C  -    A     AC  a      u 


mirna_id: dre-mir-107b
hairpin:
--    gc   u   --    u  c           c   -ua    
  ucug  cac cug  ggcu cu uacaguguugc uug   gcc 
  ||||  ||| |||  |||| || ||||||||||| |||   || u
  agac  gug gac  UCGG GA AUGUUACGACG Aac   ugg 
ca    au   c   UU    -  C           -   uag    


mirna_id: dre-mir-455b
hairpin:
auc    -----uu  c         g          U      A   U   gag 
   guug       cc ugaagugag GUAUGUGCCC UGGACU CAU gug   g
   ||||       || ||||||||| |||||||||| |||||| ||| |||    
   caac       gg acuucauuc cauauacggg accuga gua cac   c
--a    uacaucc  u         a          u      c   c   gac 


mirna_id: dre-mir-222b
hairpin:
---------     ga  ug a         c    -     -----ag    ug 
         gacgu  uc  c gacucagua ucgg uguag       ucug  u
         |||||  ||  | ||||||||| |||| |||||       ||||  g
         cugca  ag  g CUGGGUCAU AGUC ACAUC       agac  a
caucgcaca     -g  gu A         A    U     GAcgaga    uu 


mirna_id: dre-mir-2196
hairpin:
----------------   -gg   uu     --      --        GUGC   CA         
                cag   uaa  gcuuc  gaaugu  uCCUCUCU    UGC  UUUGGGAC 
                |||   |||  |||||  ||||||  ||||||||    |||  ||||||| c
                guc   guu  ugggg  cuugua  aggaggga    gcg  aagccuug 
aauaaugaaaaacaaa   aaa   uu     uc      au        --aa   --         


mirna_id: dre-mir-2198
hairpin:
cggcgagcaauacucauaacucccaa      gcga    a      -c  -   c 
                          gcgccu    acgc agcucu  cu uac c
                          ||||||    |||| ||||||  || |||  
                          CGCGGA    UGUG UCGAgg  ga gug c
--cguccgggcccaaauccggaccUC      ACCC    C      ua  c   g 


mirna_id: dre-mir-126b
hairpin:
-----ga  c       cc       u           U       C cuaugc 
       gu uuaccgg  ucacggu CAUUAUUACUU UGGUACG G      c
       || |||||||  ||||||| ||||||||||| ||||||| |      a
       ca agugguc  agugucA GUGAUAAUGAG GCCAUGC c      c
aucaaca  -       --       C           U       U aacucu 


mirna_id: dre-mir-2186
hairpin:
aagucuugucgcauacguuuuguaacaacaaauaauaacuu     c   uu au      gu 
                                         gacuu uag  g  cauuuc  a
                                         ||||| |||  |  ||||||   
                                         CUGAA AUC  C  GUGAAg  u
-----------------ucgcauuagaucuccgguaaaaAU     A   -U CG      ac 


mirna_id: dre-mir-2188
hairpin:
-   -c     ca  aa    a  A     C           U   gugagg 
 gga  aauau  gc  ugug ga AGGUC AACCUCACAUG CCu      c
 |||  |||||  ||  |||| || ||||| ||||||||||| |||       
 ccu  uuaug  cg  acac CU UCCAG UUGGAGUGUGU gga      u
c   uc     cc  gc    c  A     A           C   aggaag 


mirna_id: dre-mir-2189
hairpin:
ugcacaguuuu  uccc    a       -              c        -u     
           ga    gccc aauugaa cacagcugaugcaa caaucaaa  uggu 
           ||    |||| ||||||| |||||||||||||| ||||||||  ||| a
           cu    cggg uugauuu GUGUCGACUAUGUU GUUAGUuu  auca 
-------ccug  ucuu    a       U              U        uu     


mirna_id: dre-mir-2192
hairpin:
  c   a     --  a        c  ug      a          ---u     g 
gg aga uguua  ca aauggcag cu  gucacu uucacuuuca    guuug a
|| ||| |||||  || |||||||| ||  |||||| ||||||||||    ||||| u
cc ucu acaau  gu uuacuguC GA  CAGUGG AAGUGAAAgu    uaaau a
  -   -     cg  c        A  GU      A          cauu     a 


mirna_id: dre-mir-196d
hairpin:
-a ug   U  GU     UA      U   cucua 
  g  auu AG  AGUUU  UGUUGU GGG     u
  |  ||| ||  |||||  |||||| |||     u
  c  uaa uc  ucaaa  acaacg ccc     u
uc gu   u  ug     gc      c   uauau 


mirna_id: dre-mir-2193
hairpin:
----------------c        c  ca   au    A  U    AUCAAUU       Aa 
                 aaaaucuu au  auc  gggU UG GUGU       GUGUGAA  a
                 |||||||| ||  |||  |||| || ||||       |||||||  a
                 uuuuagaa ug  uag  uuca ac uacg       uacacuu  u
gcaccggcguaaaauau        a  ag   -c    a  -    -aauauu       cu 


mirna_id: dre-mir-2194
hairpin:
accu  u    acu     cau     c  aauuuuaaauagga    uu   - uu      a 
    gc gggu   gauuu   uucuu ca              aauc  guc a  cauugc a
    || ||||   |||||   ||||| ||              ||||  ||| |  ||||||  
    ug ucua   cuaaa   aagaa GU              UUAG  CAG U  GUAAUG u
---u  u    cuc     ---     u  ------------GG    -U   C UC      u 


mirna_id: dre-mir-2195
hairpin:
-----------------------c       -a   a  ugau      --a   aaa  a   uc     
                        cucugau  acc ca    ucuuaa   ugu   cc cua  aagu 
                        |||||||  ||| ||    ||||||   |||   || |||  ||| u
                        GGGAUUG  UGG GU    AGAguu   aca   gg ggu  uucu 
uuagcuaaguguccacacuugcGU       AG   G  ---U      aua   -ag  -   uu     


mirna_id: dre-mir-2197
hairpin:
---a     aaaggaaaac   -     --     GA    --UAU      a g    aau 
    gugua          guu gugAU  GAUUC  CUCA     GGUGcu u cagu   a
    |||||          ||| |||||  |||||  ||||     |||||| | ||||    
    cacau          cga cacua  cugag  gagu     uuacga a gucg   g
guua     -------gga   u     au     ag    ucguu      - g    gga 


mirna_id: mtr-MIR2118
hairpin:
--a     a  a  -        u aaa    uu        u      u     a   -       aacagaucuaauucau 
   gagag ga ag ggaaaggg g   gagc  gaggaagu auggga auggg gga ucgguaa                c
   ||||| || || |||||||| |   ||||  |||||||| |||||| ||||| ||| |||||||                 
   cucuc cu uc ccuuucuc c   cuug  uuccuuua uAUCCU UACCC CCU AGCCAUU                u
uac     -  c  a        u ---    uu        u      -     A   U       ucuuuaauaaguuaag 


mirna_id: mtr-MIR2199
hairpin:
-------------------------a      c g      u         u           -uaca    a      aaua ug u  a          uuaauuu        u uc    --g         uagguc    auuuucuu     a      u  agaaaauaucauaugauaucuucaucuuugcuuucuauaucacuuauauaauuaacauguuagcuacauagaucuaugcaauacaguaauuaaauaucau 
                          uaugug u ugcaau gugauccgu cuaguguauca     auuc cagcuu    u  a ua uuccaguuua       ggaauaua a  uuuu   auagaggcc      acua        guuuu auauau ua                                                                                                    a
                          |||||| | |||||| ||||||||| |||||||||||     |||| ||||||    |  | || ||||||||||       |||||||| |  ||||   |||||||||      ||||        ||||| |||||| ||                                                                                                     
                          augcac g guguug CACUAGGCA GAUCACAUAGU     uagg gucgag    a  u au aaggucaaau       ucuuguau u  aaaa   uauuuccgg      ugau        uagaa uauaua au                                                                                                    u
uguguggugguacggguaaauaaaaa      u g      c         C           uuuua    -      ---- gu u  a          --caaau        u uu    gua         -uaauu    augccaau     c      c  auaugaacaaaagauuaauauacauaguuguuuuuuaccaucacuaaagaguugguugguuuuuguuuccuuuuucuugcauacuuaaacuauaaaacau 


mirna_id: sbi-MIR156f
hairpin:
--          -    -           u    c  a    aucuauauacggcugcuccuggcg 
  gcUGACAGAA GAGA GUGAGCACgca cggc ag cugc                        a
  |||||||||| |||| ||||||||||| |||| || ||||                         
  cgacugucuu cucu cacucgugcgu gucg uc gacg                        g
cu          u    u           u    -  -    cggaucuguagguagguagguaua 


mirna_id: sbi-MIR156g
hairpin:
--        -    -         a      g  ga       cgg 
  gUGACAGA AGAG AGUGAGCAC cggccg cg  acggcac   c
  |||||||| |||| ||||||||| |||||| ||  |||||||    
  uacugucu ucuc ucacucgug gccggc gc  ugccgug   g
cc        a    g         c      -  --       uag 


mirna_id: sbi-MIR156h
hairpin:
---         -   -         a     gggc          cg     
   gUGACAGAA GAG AGUGAGCAC cggcc    gugacggcac  guca 
   ||||||||| ||| ||||||||| |||||    ||||||||||  ||| a
   uacugucuu cuc ucacucgug gccgg    cgcugccgug  uagg 
gcc         u   g         c     ----          --     


mirna_id: sbi-MIR156i
hairpin:
a        -     -        a      g   a       g   ugaaccgagacg  g 
 cUGACAGA AGAGA GUGAGCAC cagcgg cag cugcauc auc            ac c
 |||||||| ||||| |||||||| |||||| ||| ||||||| |||            ||  
 gacugucu ucucu cacucgug gucguc guc gacguag uag            ug a
a        c     u        c      -   -       -   uaguaguaagga  a 


mirna_id: sbi-MIR160f
hairpin:
------------------------   C         G       u   a   aa   a      cg 
                        UGC UGGCUCCCU AAUGCCA ccg gag  gca ugccau  u
                        ||| ||||||||| ||||||| ||| |||  ||| ||||||  g
                        acg acugaggga uugcggu ggc cuc  cgu gcggua  u
cgacgacuccguuacguucguugg   u         g       u   c   --   -      cc 


mirna_id: sbi-MIR164d
hairpin:
-        C           A   uccua   ucuc  gc   -c        cga      uc      c    u      g 
 UGGAGAAG AGGGCACGUGC ugc     acu    gc  gcu  cucuccgc   gaucca  guucau uaua cuccau g
 |||||||| ||||||||||| |||     |||    ||  |||  ||||||||   ||||||  |||||| |||| ||||||  
 accucuuc ucuugugcacg acg     uga    cg  cga  gagaggcg   cuaggu  caggua auau gaggua a
u        c           c   ucaua   ---u  au   aa        ---      --      u    c      u 


mirna_id: sbi-MIR164e
hairpin:
--------------------------------guUGGAGAAGCAGGGCACGUGCAgagacacgccggccggagcac     c  c    aga         --   u    cu    ca 
                                                                            ggccg cg cgau   ucgaccucg  cac cgca  cgca  c
                                                                            ||||| || ||||   |||||||||  ||| ||||  ||||  c
                                                                            cuggc gc gcua   agcuggagu  gug gcgu  gcgu  a
uaccaccucuuccccucgugcacgucacguccucgaucgcccacuucguuguucguucuccaaggagcgaucgaag     u  u    --g         ag   u    cu    cg 


mirna_id: sbi-MIR166h
hairpin:
--a        uu      cu    gg gc      u    uccg    u       -         cucucuccccuagucuucgcgcgcuucc 
   ggggaaug  gucugg  cggg  c  cgccgc ccgc    cucc uccuucu cuggucucu                            u
   ||||||||  ||||||  ||||  |  |||||| ||||    |||| ||||||| |||||||||                            c
   cCCCUUAC  CGGACC  GCUc  g  guggug ggcg    gagg aggagga gaccagagg                            a
acc        UU      AG    ua au      -    ----    c       c         uucucuuccuccuucucugcuaccucua 


mirna_id: sbi-MIR166i
hairpin:
--      uc      - g     ccggccggacagucggccgg 
  ggaaug  gucugg c cgaga                    c
  ||||||  |||||| | |||||                     
  CCUUAC  CGGACC G GCUcu                    g
cC      UU      A -     ggcaggcuaggucuccugcg 


mirna_id: sbi-MIR166j
hairpin:
--ugu      uu         u   -   cucucuacau       ugga        c 
     ggaaug  gucugguuc agg ccu          gcaagca    uguaguag a
     ||||||  ||||||||| ||| |||          |||||||    ||||||||  
     CCUUAC  CGGACCAGG Ucc ggg          cguucgu    acgucauc g
acucC      UU         C   a   ---------u       --ua        c 


mirna_id: sbi-MIR166k
hairpin:
---        g   a   a         uc   u     -     u    uu 
   gaauggag cug ucc agauccucc  gag gcgaa acaaa gccg  u
   |||||||| ||| ||| |||||||||  ||| ||||| ||||| ||||   
   CUUACUUC GAC AGG Ucugggggg  cuc cguuu uguuu uggu  u
cUC        G   C   C         uu   u     g     -    uu 


mirna_id: sbi-MIR167h
hairpin:
--            C         aag   acgag  c       u 
  UGAAGCUGCCAG AUGAUCUGa   cau     uc uucguua c
  |||||||||||| |||||||||   |||     || ||||||| a
  acuuugacgguc uacuagacu   gua     ag aaguagu u
uu            -         --a   gauaa  a       c 


mirna_id: sbi-MIR167i
hairpin:
--     A    C  -            uu     g   -cc  -u   a     -c      g   cc 
  agUGA GCUG CA GCAUGAUCUAgc  ugguu gca   au  ggc ggcgc  cacaca ugg  u
  ||||| |||| || ||||||||||||  ||||| |||   ||  ||| |||||  |||||| |||   
  uuacu cgac gu cguacuagauug  acuaa cgu   ug  ucg ccgug  gugugu gcc  c
cu     c    a  a            uu     a   cca  uc   -     au      -   uu 


mirna_id: sbi-MIR169e
hairpin:
--      A               auuucuugggucggaugacugaguuguuga 
  UAGCCA GGAUGACUUGCCGGc                              g
  |||||| |||||||||||||||                              c
  aucggu ucuacugaacggccg                              c
gc      g               gccggcagcuaggcccagacaaguaggggu 


mirna_id: sbi-MIR169h
hairpin:
--          U   U      gcuauaugccugagagccugucucuu 
  UAGCCAAGGA GAC UGCCUA                          g
  |||||||||| ||| ||||||                           
  aucgguuccu cug acggau                          g
uc          u   u      auacgagucguguauguuuaaauggu 


mirna_id: sbi-MIR169j
hairpin:
-            ---U          c        ------       cccuguccgggaacgu 
 ugUAGCCAAGGA    GACUUGCCGG cgaucgau      gccucau                c
 ||||||||||||    |||||||||| ||||||||      |||||||                a
 acaucgguuucu    uuggacggcc gcuagcug      cggagug                u
c            cuuc          a        cuacgc       ucaaacguaguguacg 


mirna_id: sbi-MIR169k
hairpin:
--C          -            ccucaaauuug    g   u ua 
   AGCCAAGGAU GACUUGCCGGcu           aagc ucg c  a
   |||||||||| ||||||||||||           |||| ||| |   
   ucgguuccug cugaacggcuga           uucg agu g  g
aca          u            uucaaaaauaa    g   c uc 


mirna_id: sbi-MIR169l
hairpin:
uga          U    U       -u  -     gc      --au  g 
   UAGCCAAGGA GACU GCCUGug  cc uuugu  cgaagg    ca a
   |||||||||| |||| |||||||  || |||||  ||||||    ||  
   aucgguuccu cuga cggauac  gg agaua  guuucc    gu a
-cg          -    -       uu  u     ga      gagu  a 


mirna_id: sbi-MIR169m
hairpin:
---          U    U       uccucucuaaaggaucagcaa 
   UAGCCAAGGA GACU GCCUAua                     a
   |||||||||| |||| |||||||                     u
   aucgguuccu cuga cggguau                     a
ccg          -    -       acucuggugaucuucggaguu 


mirna_id: sbi-MIR169n
hairpin:
-   -         U    U     uauccucuaugaaggaucagca 
 ggU AGCCAAGGA GACU GCCUA                      a
 ||| ||||||||| |||| |||||                      a
 ccg ucgguuccu cuga cgggu                      u
u   a         -    -     acucuggugaguuucggagcua 


mirna_id: sbi-MIR171g
hairpin:
--        a         c    aua         aa 
  uauuggug gguucaauc gaug   gguuuuaca  c
  |||||||| ||||||||| ||||   |||||||||   
  AUAACCGC CCGAGUUAG cuau   cuaaaaugu  a
CU        G         U    -ga         cg 


mirna_id: sbi-MIR171h
hairpin:
--            c          ag         auuu 
  gguauuggcgcg cucaauccga  gcguggcug    g
  |||||||||||| ||||||||||  |||||||||    g
  CUAUAACUGCGC GAGUUAGGuu  uguaccgac    c
cu            C          cu         ggua 


mirna_id: sbi-MIR171i
hairpin:
---        u       c        u aa     ag g  gaa 
   guguuggc cggcuca ucagaagc g  auagu  u au   u
   |||||||| ||||||| |||||||| |  |||||  | ||    
   UAUAACCG GCCGAGU AGUcuuug c  uaucg  g ua   c
uuC        U       U        - gg     au g  aau 


mirna_id: sbi-MIR171j
hairpin:
gc   c          a           aucaucagaugauguauuuuaaauu 
  gag gauauuggug gguucaaucag                         u
  ||| |||||||||| |||||||||||                         a
  uuc CUAUAACCGC CCGAGUUAGUc                         c
-c   a          G           agggaccccuaaguggaaguacgua 


mirna_id: sbi-MIR171k
hairpin:
--  g                       a  cuu c     aaa 
  cg gauauuggcgcgguucaaucaga ag   g gcucc   g
  || ||||||||||||||||||||||| ||   | |||||    
  gc CUAUAACCGUGCCGAGUUAGUuu uc   c cgggg   c
cu  a                       c  -ac u     acc 


mirna_id: sbi-MIR172d
hairpin:
---u                a  ----a -  a g         aaa 
    ggcaucaucaagauuc ca     c cc u gauccaaau   c
    |||||||||||||||| ||     | || | |||||||||   c
    UCGUAGUAGUUCUAAG gu     g gg a cuagguuua   a
uACG                A  acgua a  - g         guc 


mirna_id: sbi-MIR319b
hairpin:
--ga    u            cu   -       u         --ca      g   ac          ac         a   ug   aag 
    gagc cucuucagucca  cua aaauggc guagaguuu    uuagcu ccg  ucauccauuc  cuaccaaga cca  gac   c
    |||| ||||||||||||  ||| ||||||| |||||||||    |||||| |||  ||||||||||  ||||||||| |||  |||   g
    CUCG GGGAAGUCAGGU  ggu uuugucg caucucgaa    aaucga ggc  ggugggugag  gaugguucu ggu  uug   a
uuCC    U            -U   a       -         cuaa      g   gc          cc         -   --   gau 


mirna_id: sbi-MIR390
hairpin:
-  A         G         Cua   aaacac      u          augag                g c      --gc     gca 
 ug AGCUCAGGA GGAUAGCGC   gga      auagau ggagcuagcc     gagaaagagagagaga g agcaga    gagau   u
 || ||||||||| |||||||||   |||      |||||| ||||||||||     |||||||||||||||| | ||||||    |||||    
 ac ucgaguccu ucuaucgcg   ucu      uaucug ucuugguugg     cucuuucucuuucucu c ucgucu    cucua   g
c  c         a         aag   ---aac      -          ---aa                a -      aagu     agu 


mirna_id: sbi-MIR393b
hairpin:
-           C          cacc  -  g  -   -   ug 
 UCCAAAGGGAU GCAUUGAUCu    ug cc cc cgc cgc  c
 ||||||||||| ||||||||||    || || || ||| |||  g
 agguuucccua cgugacuaga    ac gg gg gcg gcg  c
a           a          ----  a  -  a   c   uc 


mirna_id: sbi-MIR394b
hairpin:
---c      U C           uugccgaucgau   g 
    UUGGCA U UGUCCACCUCC            cuu c
    |||||| | |||||||||||            ||| a
    aaccgu a acggguggagg            gaa g
aggu      c u           ---uuuuuuuuu   a 


mirna_id: sbi-MIR395c
hairpin:
--         a              --      ggcu 
  gaguucccu caagcacuucacga  gaccuu    u
  ||||||||| ||||||||||||||  ||||||     
  CUCAAGGGG GUUUGUGAAGUGuu  uuggga    a
uu         -              ug      aaua 


mirna_id: sbi-MIR395g
hairpin:
--       aa              accuu     aa 
  guucccu  aagcacuucacgag     ggcuu  u
  |||||||  ||||||||||||||     |||||   
  CAAGGGG  UUUGUGAAGUGuuc     ccggg  a
CU       -G              -----     aa 


mirna_id: sbi-MIR395h
hairpin:
--       u              gag     -au  --      
  guucccu caagcacuucacau   gcacc   uc  aaacu 
  ||||||| ||||||||||||||   |||||   ||  |||| c
  CAAGGGG GUUUGUGAAGUGua   ugugg   ag  uuugu 
CU       -              --a     auu  aa      


mirna_id: sbi-MIR395i
hairpin:
--       g            a      ----------       aua   ug 
  guucccu caaacacuucac agcuag          accauau   gua  c
  ||||||| |||||||||||| ||||||          |||||||   |||   
  CAAGGGG GUUUGUGAAGUG ucgauc          uggugua   cgu  c
CU       -            a      cauugaccua       aca   uc 


mirna_id: sbi-MIR395j
hairpin:
--       u              gaag   uu   au      g 
  guucccu caagcacuucacau    cuc  ugc  uauauu g
  ||||||| ||||||||||||||    |||  |||  ||||||  
  CAAGGGG GUUUGUGAAGUGua    gag  acg  auguag c
CU       -              acca   uu   --      g 


mirna_id: sbi-MIR395k
hairpin:
--     c                gaagcuucacauuggc 
  guucc uucaagcacuucacau                a
  ||||| ||||||||||||||||                g
  CAAGG AGGUUUGUGAAGUGua                a
CU     -                accagaguucugaugu 


mirna_id: sbi-MIR395l
hairpin:
--       u             ugga      -u   -u   g 
  guucccu caagcacuucaca    gcauua  uug  cuu g
  ||||||| |||||||||||||    ||||||  |||  ||| a
  CAAGGGG GUUCGUGAAGUGu    cguagu  aau  gaa g
CU       -             --ua      uu   uc   a 


mirna_id: sbi-MIR396d
hairpin:
C    CA                g   u   uc   u  ucuu   uu 
 UCCA  GGCUUUCUUGAACUGu aac cga  gcg gc    agc  g
 ||||  |||||||||||||||| ||| |||  ||| ||    |||   
 aggu  cugaaagaacuuggua uug guu  cgc cg    ucg  c
a    uc                g   u   -u   u  -cuc   uu 


mirna_id: sbi-MIR396e
hairpin:
-      CA                g   ucguggggguagaaaccuugcuggguuugguucccaugucggauggaaugcuuggcuccucccag 
 uUUCCA  GGCUUUCUUGAACUGu aac                                                                 c
 ||||||  |||||||||||||||| |||                                                                  
 aaaggu  ccgaaagaacuuggua uug                                                                 g
c      ac                g   uccaucucggccggcucgcuucgcucuuuggggcguuaaguuaagugagugccggccccuucuua 


mirna_id: sbi-MIR397
hairpin:
UC                A      a c        ca    u   u 
  AUUGAGUGCAGCGUUG UGagcc g uggccggc  gccg gcg c
  |||||||||||||||| |||||| | ||||||||  |||| ||| c
  UAACUCACGUCGCGGC ACUcgg c accggccg  cggc cgc g
-U                C      - -        --    -   c 


mirna_id: sbi-MIR399j
hairpin:
---  u           c     ugaa   c     ga  agcuu   a 
   ag gcgguucuccu uggca    cga ggcug  gc     gcc c
   || ||||||||||| |||||    ||| |||||  ||     |||  
   UC CGUUAAGAGGA ACCGU    guu ccggc  cg     cgg a
ccG  C           A     --uc   c     ac  --gcu   u 


mirna_id: sbi-MIR408
hairpin:
--a      c       a   u   auggggccaucaacaacaaaauuuccaauuuccguuugcuugcccacaaaauggagggacuugucaggagagguauca 
   caggga gaggcag gca ggg                                                                              g
   |||||| ||||||| ||| |||                                                                               
   GUCCCU CUCCGUC CGU Ccc                                                                              g
uCG      U       A   -   cuccuucguuguugugguccuguggucgacucgagagaguccgguagugguaaaguggucccuccguggaagagagac 


mirna_id: sbi-MIR437a
hairpin:
--                ugu   a                uauauaa      cua        ccaaguuuacagaaauauauauaaugacaucu 
  aagucaaacuucucua   uuu acuaaguuuauagaaa       caacau   gaauacca                                a
  ||||||||||||||||   ||| ||||||||||||||||       ||||||   ||||||||                                g
  UUCAGUUUGAAGAGAU   AAA ugauuuagauauuuuu       guugua   uuuguggu                                a
ga                -UG   c                --ccacg      --a        uuaauuauagaacucucacgugaacgaacaua 


mirna_id: sbi-MIR437b
hairpin:
---                        ug     c      a         auacaauacuaaauaaaagcauuaucaagacauau 
   ucaaacuucucuaauuuugaucaa  uuaua aaaaau uauuagcau                                   u
   ||||||||||||||||||||||||  ||||| |||||| |||||||||                                    
   AGUUUGAAGAGAUUGAAAcugguu  aauau uuuuua gugguugua                                   u
UUC                        ca     c      c         gacuuuguaguuuaauaaaguaauguagaugguac 


mirna_id: sbi-MIR437c
hairpin:
--             ua         aau      cuaacaauuuauauagguugacaacaaacgauugacaucaauagauuuauuau 
  gucaaacuucuuu  aauuuugau   caauau                                                     g
  |||||||||||||  |||||||||   ||||||                                                     a
  CAGUUUGAAGAGA  UUGAAAcua   guuaua                                                     a
UU             --         agu      aauacuuuuauauaguagaauuacuuuucuuagcauauaauauuuuuuuacca 


mirna_id: sbi-MIR437d
hairpin:
--       u           --cgaa         uauuaacaucuauaucuauacaagauaaaugaa 
  aagucaa cuucucuaacu      gaguuuaua                                 c
  ||||||| |||||||||||      |||||||||                                  
  UUCAGUU GAAGAGAUUGA      uucaaauau                                 c
gg       U           AAuugg         ccuuuuacgugguuauaaauguuguaguguaau 


mirna_id: sbi-MIR437e
hairpin:
----      --a              cauug  u    uacuaaaucaauua 
    cagauu   cugauuuugaucaa     uc gaaa              g
    ||||||   ||||||||||||||     || ||||               
    GUUUGA   GAUUGAAAcugguu     ag cuuu              a
UUCA      AGA              -caaa  u    uuauauauaauugu 


mirna_id: sbi-MIR437f
hairpin:
---                      aaa    c         a a      c   u      ccaaauaaaugcacu   aa     a 
   agucaaacuucucuaacuuuga   aagu uguagaaaa u uauuaa auc acaaua               auc  gacau u
   ||||||||||||||||||||||   |||| ||||||||| | |||||| ||| ||||||               |||  ||||| u
   UCAGUUUGAAGAGAUUGAAAcu   uuca auaucuuuu a gugguu uag uguugu               uag  uugua u
gaU                      -gg    a         c c      c   u      uuaaucaaaguaauu   -g     c 


mirna_id: sbi-MIR437g
hairpin:
--c                              -       a au   c    g     gu      -aaaug     ucaagacauau 
   agucaaacuuuucuaacuuugacuaaguuu uagagaa u  guu acgu uacaa  ucaaau      cacua           u
   |||||||||||||||||||||||||||||| ||||||| |  ||| |||| |||||  ||||||      |||||            
   UCAGUUUGAAGAGAUUGAAAcugguucaaa aucuuuu a  uag ugua auguu  aguuug      guggu           u
gaU                              u       a cg   u    g     gu      aucaaa     uuaagagauac 


mirna_id: sbi-MIR437i
hairpin:
--                      c      c      guuauauuaacaucuucaguaccaaauaaauguacuaucaagacauu 
  gucaaacuucuuuaacuuugac aaguuu uagaaa                                               u
  |||||||||||||||||||||| |||||| ||||||                                                
  CAGUUUGAAGAGAUUGAAAcug uucaaa aucuuu                                               g
UU                      u      u      uuacgugguaauagaugugguaguuaaucaaaacaaucuagguggua 


mirna_id: sbi-MIR437j
hairpin:
--                        a    -a           ccaauaguuucaacgucaaauauguuucauuagauucuccaa 
  gucaaacuucucuaacuuugacca guuu  uagaaaaugca                                          g
  |||||||||||||||||||||||| ||||  |||||||||||                                          a
  CAGUUUGAAGAGAUUGAAAcuggu caaa  guuuuuuaugu                                          a
UU                        a    aa           aauuguagauguucauguuuauuuacacgauaguucuguaua 


mirna_id: sbi-MIR437k
hairpin:
--au                         ac  a          cac    aauaacaucagcuaguuugauuaauucuccauaaa 
    gucaaacuucucuaacuuugaccaa  uu uagaaaaaua   caac                                   a
    |||||||||||||||||||||||||  || ||||||||||   ||||                                    
    CAGUUUGAAGAGAUUGAAAcugguu  aa aucuuuuuau   guug                                   u
gaUU                         ca  a          aca    aagauguuuaaguuuauuuacgugauuauucugua 


mirna_id: sbi-MIR437l
hairpin:
--          g     a   a    a   a          cacc    --g  --aa  cc     a    a      -   ucca 
  gucaaacuuu uuaac uug ccaa uuu uagaaaaaug    aaca   ac    ca  aaauu guuu auuaaa uuu    u
  |||||||||| ||||| ||| |||| ||| ||||||||||    ||||   ||    ||  ||||| |||| |||||| |||     
  CAGUUUGAAG GAUUG AAc gguu aaa aucuuuuuau    uugu   ug    gu  uuuaa cgag uaguuu gaa    a
UU          A     A   c    c   a          auaa    aga  aaga  uu     -    a      c   uaac 


mirna_id: sbi-MIR437m
hairpin:
----        ca         --aaa      ac       augcacc     ---    aa  uc    ua   -   uuaa     c 
    gucaaacu  ucuaacuuu     caaguu  uagaaaa       aacau   cuag  ua  aaau  gcu uca    auuuu c
    ||||||||  |||||||||     ||||||  |||||||       |||||   ||||  ||  ||||  ||| |||    |||||  
    CAGUUUGA  AGAUUGAAA     guucaa  aucuuuu       uugua   gauc  au  uuug  uga ggu    uaaag a
gaUU        AG         aacug      aa       aauauaa     uau    aa  ua    ug   u   ucug     c 


mirna_id: sbi-MIR437n
hairpin:
--    -     c    c                a       -  c  c     -     c   uacaaaaugaaaugaauuucguaaaaucu 
  aagu aaauu ucuc aacuuugaccaaguuu uagaaaa ua ac aacau ggcaa auc                             a
  |||| ||||| |||| |||||||||||||||| ||||||| || || ||||| ||||| |||                              
  UUCA UUUGA AGAG UUGAAAuugguucaaa aucuuuu au ug uugua ucguu ugg                             u
ua    G     -    A                c       u  a  a     g     a   uuuauuaacgugauaguucuuauaaguuu 


mirna_id: sbi-MIR437o
hairpin:
--     --      a        - a         gaaaaaugcaccauccucuacaacaucaaauuaguuucauuaaauucucuaug 
  aaguc  acuuuu uaacuuug c agguuuuua                                                     a
  |||||  |||||| |||||||| | |||||||||                                                      
  UUCAG  UGAAGA AUUGAAAc g uucaaaaau                                                     a
ga     UU      G        u a         auuuuuuauauaauugucgauguccaaguguauuuacgugaugguucuguaua 


mirna_id: sbi-MIR437p
hairpin:
--au                ac             a   c    auau        c     uac     ----------    g      c   --a  c 
    gucaaacuucucuaac  ugaccgaguuugu gga aaau    acuagcau uacaa   caaau          aaau cacuau aag   gu a
    ||||||||||||||||  ||||||||||||| ||| ||||    |||||||| |||||   |||||          |||| |||||| |||   ||  
    CAGUUUGAAGAGAUUG  Acugguucaaaua cuu uuua    ugguugug auguu   guuua          uuua guggua uuu   ca a
gaUU                AA             a   u    --cc        u     uua     aucaaaguag    g      c   aaa  g 


mirna_id: sbi-MIR437q
hairpin:
-gu      c      g      -ga   g  a       aauauaauuaacaucuacgaugccaaaugaaugcaucauc 
   agucaa cuucuc aacuuu   caa uu auagaaa                                        a
   |||||| |||||| ||||||   ||| || |||||||                                         
   UCAGUU GAAGAG UUGAAA   guu ag uaucuuu                                        a
gaU      U      A      aug   g  a       cuccgucgcuacugauguucugaugcuguuguuuaaauaa 


mirna_id: sbi-MIR437r
hairpin:
---   a          u      a      c        a  ------     a     uac  c       u     u    aa    c   g 
   agu aaacuucucu auuuug ccaagu uauagaaa au      guacu auauu   aa aucaaau aguuu auuc  uuca cau c
   ||| |||||||||| |||||| |||||| |||||||| ||      ||||| |||||   || ||||||| ||||| ||||  |||| ||| a
   UCA UUUGAAGAGA UGAAAc gguuca auaucuuu ua      cgugg uauga   uu ugguuua ucaag ugag  aggu gug a
gaU   G          U      c      a        a  uguaac     a     -ca  a       u     -    --    u   u 


mirna_id: sbi-MIR437s
hairpin:
--                      u  ag    a       acacucaaacaucuagaauaucagaugaguuucauuagauucuuuau 
  aagucaaacuucuuuaacuuug cc  guuu uagaaaa                                               g
  |||||||||||||||||||||| ||  |||| |||||||                                                
  UUCAGUUUGAAGAGAUUGAAAc gg  cgaa aucuuuu                                               c
ga                      u  ca    a       auaugacuguaaauguucaaguuuauuuaagagauaguuuuauauaa 


mirna_id: sbi-MIR437t
hairpin:
--         g    u             ----       a   u       a a         ----------ga uc     uc       
  gucaaacuu ucua cuuugaccaaguu    gaaaaau uau aacaucu c auaucaaau            a  cacua  gaaaua 
  ||||||||| |||| |||||||||||||    ||||||| ||| ||||||| | |||||||||            |  |||||  ||||| u
  CAGUUUGAA AGAU GAAAcugguucaa    cuuuuua gug uuguaga g uguaguuug            u  guggu  cuuuau 
UU         G    U             auau       c   u       c a         auauaaguaacg gu     -c       


mirna_id: sbi-MIR437u
hairpin:
---      --        g g  ug u   uu          ua    c     caagcugaaauaagugcacuaucaagaca 
   uuaaac  cucuaacu u ac  a uuu  uggaaaaaua  uuaa aucug                             u
   ||||||  |||||||| | ||  | |||  ||||||||||  |||| |||||                              
   AGUUUG  GAGAUUGA A ug  u aaa  aucuuuuuau  gguu uagau                             g
UUC      AA        A g  gu c   -u          gc    a     acuguaguuuaaucaaaguaauuuaagag 


mirna_id: sbi-MIR437v
hairpin:
--         a  uuca       auaucauggagcauuugaugaaacugcuuugaua 
  gucaaacuu cu    cugacuu                                  u
  ||||||||| ||    |||||||                                  u
  CAGUUUGAA GA    GAUUGAA                                  g
UU         -  ----       Acagguucaaauaucuuuuuacguaguuguagau 


mirna_id: sbi-MIR437w
hairpin:
----    uc        a            a        ugcauc   -   uccaac   aaauu   a   -u     u u cg    a 
    uaaa  ucucuaau uuuaccaaguuu uagaaaaa      aac auu      auc     agu uca  uaaau c c  ugaa u
    ||||  |||||||| |||||||||||| ||||||||      ||| |||      |||     ||| |||  ||||| | |  |||| a
    GUUU  AGAGAUUG AAgugguucaaa aucuuuuu      uug uaa      uag     uca agu  auuua g g  acuu u
UUCA    GA        A            a        ---uuu   a   ---uuu   -augu   -   uc     c u au    a 


mirna_id: sbi-MIR529
hairpin:
              a          ac   guaca       -  aucuc      cu uua 
gggagaagagagag guacagccuu  cau     cacacuc ca     aacagu  c   u
|||||||||||||| ||||||||||  |||     ||||||| ||     ||||||  |    
uCUUCUUCUCUCUC CAUGUCggaa  gua     gugugag gu     uugucg  g   a
              C          --   -----       u  --cca      uc uau 


mirna_id: sbi-MIR821a
hairpin:
          c  cuaaa     C  C  C   A        a    g          c             a  c    u     a                                            g        u 
uaaaugauuu ag     aAAGU AU AA AUA AAGUUGua aacu gucaagaucu caauuuuuauuuu gu auuu uucau ugacaaaguaauaguaacauuguucauaaauuuuacauaucucu auauaguu c
|||||||||| ||     ||||| || || ||| |||||||| |||| |||||||||| ||||||||||||| || |||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| a
auuuacuaaa uc     uuuca ua uu uau uucaacau uuga uaguucuaga guugaaaauaaaa ca uaaa aagua gcuguuucauuaucauuguaacaaguauuuaaaauguauagaga uauaucaa u
          a  aacua     a  c  a   g        g    g          u             c  a    u     g                                            g        a 


mirna_id: sbi-MIR821b
hairpin:
uaaaugauuucaga            G    UA            c g           cac  u               g       a   a a     g            ca      a        a   u   a   u 
              ugaaaAAGUUAU AACA  AAAGUUGuagaa u auuaagaucua   cu uuauuuuggucauuu uucaucc aug a ugaua uaacauuguuca  aaauuu uauaucuc cuc uau guu a
              |||||||||||| ||||  |||||||||||| | |||||||||||   || ||||||||||||||| ||||||| ||| | ||||| ||||||||||||  |||||| |||||||| ||| ||| ||| u
              acuuuuucaaua uugu  uuucaauaucuu a uaguucuagau   ga aauaaaaccaguaaa aaguagg uau u acuau auuguaacaagu  uuuaaa auguagag gag aua caa a
--------------            g    ug            c g           auu  u               a       c   c c     g            -a      -        a   u   c   a 


mirna_id: sbi-MIR821c
hairpin:
             cuaaa        C  C   A        g    g          c             a       u     a  a                   g                     g        u 
uaaaugauuuuag     aAAGUCAU AA AUA AAGUUGua aacu gucaagaucu uaauuuuuauuuu gucauuu uucau ug caaaguaauaguaacauug ucauaaauuuuacauaucucu auauaguu c
|||||||||||||     |||||||| || ||| |||||||| |||| |||||||||| ||||||||||||| ||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||||| |||||||| a
auuuacuaaaauc     uuucagua uu uau uucaacau uuga uaguucuaga guugaaaauaaga caguaaa aagua gc guuucauuaucauuguaac aguauuuaaaauguauagaga uauaucaa u
             cacua        c  a   g        g    g          u             c       u     g  c                   a                     g        a 


mirna_id: sbi-MIR821d
hairpin:
-----------     G    C    AC            a          c  a              uc    auc       u          c  c            u      a   c   g       u 
           aaaAA UCAU AACA  AAAGUUGuagaa ucauuaauau ua aacuuuuauuuugg  auuu   cauucga aaagugauag aa auuguucauaaa uuuaca auc cuc uaugguu c
           ||||| |||| ||||  |||||||||||| |||||||||| || ||||||||||||||  ||||   ||||||| |||||||||| || |||||||||||| |||||| ||| ||| ||||||| a
           uuuuu agua uugu  uuucaacaucuu aguaguuaua au uugaaaauaaaauc  uaaa   guaggcu uuucacuauc uu uaacaaguguuu aaaugu uag gag auaucaa u
cuaaaguaagc     a    c    au            g          u  g              ca    caa       c          a  a            u      a   a   a       a 


mirna_id: sbi-MIR821e
hairpin:
----------------aa        C  A   A        g    a          c c           a       u     a                                            g        u 
                  aAAGUCAU AA AUA AAGUUGua aacu gucaagaucu c auuuuuauuuu gucauuu uucau ugacaaaguaauaguaacauuguucauaaauuuuacauaucucu auauaguu a
                  |||||||| || ||| |||||||| |||| |||||||||| | ||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| u
                  uuucggua uu uau uucaacau uuga uaguucuaga g ugaaaauaaaa uaguaaa aagua acuguuucauuaucauuguaacaaguauuuaaaauguauagaga uauaucaa g
auuuacuaaaaucaacua        c  a   g        g    g          u u           c       u     g                                            g        a 


mirna_id: sbi-MIR1432
hairpin:
gauaggacauaggaggcgagagggacgacgagccguugguuugu    --   c          -    A           G  g          -----   u  a 
                                            gggu  gug guccuaugCU CAGG GAGAUGACACC AC ucggacggac     cgg cg u
                                            ||||  ||| |||||||||| |||| ||||||||||| || ||||||||||     ||| || c
                                            cccg  cau caggauacga gucc cucuacugugg ug agccugccug     gcc gc c
------------------------acuuuugucccucuacauga    ac   u          a    g           g  a          ucugu   -  g 


mirna_id: sbi-MIR1435a
hairpin:
guuguauuaaugcacccaucauauuauu      ----     a   u u      a     c                   U   aauu     ---aauuu      -  a               gu    -auaaaug  a  ccaa  a   aaca 
                            uacucu    guucc aau a agguua uuuag uuUUUCUUAAGUCAAACUU UCu    uugac        uagaaa au uauuaacaucuacaa  ucaa        ca ua    cu cca    u
                            ||||||    ||||| ||| | |||||| ||||| ||||||||||||||||||| |||    |||||        |||||| || |||||||||||||||  ||||        || ||    || |||    a
                            augagg    caagg uua u uccagu aaauc aaaaaggauucaguuugaa aga    aacug        gucuuu ua guaguuguagauguu  aguu        gu au    ga ggu    u
-----------------------acuuc      uauc     c   c c      g     -                   u   ----     guucaaau      c  c               gu    caaacaaa  a  uuag  -   acuu 


mirna_id: sbi-MIR1435b
hairpin:
cuauagaauuauaaaauaaucuuuuac  u       acc       -----       c  a    UUC          C     --aaa    aacaa     a             caaa       gc   -----      aa   u 
                           uc cuccauc   gaauaaa     ucaauuc ua aguU   UUAAGUCAAA CUUUU     guuu     aauuu uagaaaagagcac    auuuaug  acu     aguaua  aug u
                           || |||||||   |||||||     ||||||| || ||||   |||||||||| |||||     ||||     ||||| |||||||||||||    |||||||  |||     ||||||  |||  
                           ag gagguag   uuuauuu     aguuaag au ucaa   aauuuaguuu gaaaa     caaa     uuaaa aucuuuucucgug    uaaauac  ugg     ucguau  uac g
---------------------------  u       gua       aggua       c  c    uaa          u     aaaug    cuaac     c             uuca       ua   uuuag      aa   u 


mirna_id: sme-mir-2156b
hairpin:
-     aacu    -       UU A       AU    au 
 uucau    gaaa AAGGUUU  G GCCGUAA  CAaa  a
 |||||    |||| |||||||  | |||||||  ||||   
 aagua    cuUU UUCCAAA  C CGGCAUU  guuu  a
u     aagu    A       UC C       CC    au 


mirna_id: sme-mir-753e
hairpin:
----u   -        U           a 
     aAG GCUUGAAU GUGAUCUCAua a
     ||| |||||||| |||||||||||  
     UUC CGAACUUA UACUAGAGUau c
auaaC   U        U           c 


mirna_id: sme-mir-76
hairpin:
---gaua        --      U             g   u    
       aacauuuu  UCAUUC UAAACAAUGAAUA uuu ucc 
       ||||||||  |||||| ||||||||||||| ||| || a
       uuguaaAG  AGUAAG AUUUGUUGCUUau aaa agu 
uuuacga        AG      U             g   c    


mirna_id: sme-mir-124c-2
hairpin:
     auauu    aa     A   C   U         a    au 
ccauu     caug  GCAUU ACC UGU GUCUUAGAU guuu  u
|||||     ||||  ||||| ||| ||| ||||||||| ||||   
gguaa     guAC  CGUAA UGG GCA CGGAAUuua caaa  a
     --agu    --     G   C   -         -    ac 


mirna_id: sme-mir-2204
hairpin:
------uac    A    GA    -AA    ACc   cu  ca 
         UGAA UUAG  CGGA   UUAC   aau  ac  a
         |||| ||||  ||||   ||||   |||  ||  c
         AUUU AAUC  GCCU   AAug   uua  ug  a
cuaacccaU    G    AG    ACA    --a   au  ca 


mirna_id: sme-mir-2e
hairpin:
---------u       -    g        --UU     C      u  cca 
          auagguc agau AAACCUAG    GGUUG GAUAUG ug   u
          ||||||| |||| ||||||||    ||||| |||||| ||    
          uauucag ucua UUUGGAUC    UCGAC CUAUac au   u
cuacucuuuu       c    A        UCGU     A      c  aac 


mirna_id: sme-mir-2206
hairpin:
---c        C  A  -UA        cuucucac      a 
    AGGGCAGG AU GC   AGUGguua        uggaaa u
    |||||||| || ||   ||||||||        |||||| g
    uuCCGUCC UA CG   UCACCAgu        aucuuu g
cauu        -  G  UGG        --uuacua      a 


mirna_id: sme-mir-753d
hairpin:
----uC           U           u 
      AGGGCUUGGAU GUGAUCUCgua a
      ||||||||||| |||||||||||  
      UCUCGAACUUA UACUAGAguau u
uaaaUC           U           u 


mirna_id: sme-mir-2147d
hairpin:
u    ----u     u  u     C    AAC     CC    U     ca 
 ugcu     uugga gu aacau GGAA   UCGCA  GUGA AUugu  a
 ||||     ||||| || ||||| ||||   |||||  |||| |||||  c
 acgg     gaccu ca uugUA CCUU   AGCGU  CACU Uaaca  u
-    cuuuu     u  -     C    GUC     --    U     cu 


mirna_id: sme-mir-2205
hairpin:
-ccuc ua      uU   UA     U  A    --    a  u 
     u  guugug  GGA  GUGAG AA GCGG  UGAu gu u
     |  ||||||  |||  ||||| || ||||  |||| ||  
     a  uagcAC  CCU  UACUC UU UGUC  acua ca c
uaauu gc      --   UC     U  A    Ua    -  a 


mirna_id: sme-mir-2f
hairpin:
ggcaA    A   -   A    U     agcu 
     UCUG AGC UGG UGUG UAUga    u
     |||| ||| ||| |||| |||||     
     AGAC UCG ACC ACAC AUacu    u
--UUG    A   U   G    U     auuu 


mirna_id: sme-mir-2154-2
hairpin:
-g      uauu     uUC          UU   A      a    aaau 
  agugau    agaau   AGCUGUACAA  GGC UUGUGU ugau    g
  ||||||    |||||   ||||||||||  ||| |||||| ||||     
  ucacua    uuuua   UCGAUAUGUU  CUG AACAca auua    a
aa      --uu     UAU          -U   -      -    caua 


mirna_id: sme-mir-31b-2
hairpin:
-  A  C     G    C       A   acu 
 ca GG AAGAU CUGG AUAGCUG uaa   a
 || || ||||| |||| ||||||| |||    
 gU CC UUCUA GACU UAUCGAc auu   u
a  A  U     G    -       c   auu 


mirna_id: sme-mir-754c-2
hairpin:
-a      - a c       U   -    UU        u 
  uccacc c g auGUUGC UGG GGUA  ACUAUauu a
  |||||| | | ||||||| ||| ||||  ||||||||  
  aggugg g C UAUAACG ACU CUAU  UGAUauaa u
ua      a A -       U   U    UU        u 


mirna_id: sme-mir-754b-2
hairpin:
uuauca      - a c          GG    UU C      u 
      uccacc c g auGUUGCUUG  GGUA  A UAuauu a
      |||||| | | ||||||||||  ||||  | ||||||  
      aggugg g c UAUAACGAAC  CUAU  U Auauaa u
--uaua      a a -          UA    UU A      u 


mirna_id: sme-mir-2160-2
hairpin:
c        uaa  a   - G        U          guacua 
 uuugugau   au UGG C CUUAUGUG AGAACCGGuu      u
 ||||||||   || ||| | |||||||| ||||||||||       
 aaacacua   ua aCC G GAAUGUAC UUUUGGucaa      a
a        uga  a   U A        U          auuuuu 


mirna_id: sme-mir-2202
hairpin:
ua      au      U   C    A   U         cuu  uua 
  aguugg  uugaua GCG AAAA GAA AUUAAUCGA   ug   a
  ||||||  |||||| ||| |||| ||| |||||||||   ||    
  ucaacu  aauuAU CGC UUUU CUU UAAUUAGcu   ac   u
--      --      U   A    C   -         --c  uug 


mirna_id: sme-mir-2203
hairpin:
a         -GAA  -  UAA      UC     caaa 
 aaaauuuAC    GG CU   UGAUUA  AUuua    c
 |||||||||    || ||   ||||||  |||||     
 uuUUGAAUG    CU GA   ACUAau  uaaau    c
-         AUUG  A  ---      --     uaaa 


mirna_id: sme-mir-2200
hairpin:
aa    g        U   GA  -   AUUA         auu 
  uuuu auacaguu GAA  CG AUU    UUGAUUAUU   g
  |||| |||||||| |||  || |||    |||||||||    
  aaaa uaUGUCGA CUU  GC UAA    AAuuaguag   u
ua    a        -   AA  C   --AA         agu 


mirna_id: sme-mir-2201
hairpin:
-------------cau      g uca    A  GA   AGC       Gac 
                gaugcu c   AGUU CU  AGA   UGAUGCU   a
                |||||| |   |||| ||  |||   |||||||    
                CUACGA G   UCGA GA  UCU   AUuauga   a
uaauuuuucgauaagc      G ---    A  AG   ---       aga 


mirna_id: cel-mir-2207
hairpin:
--    A      A            a  u  g  gga   gg 
  UGUG AUUGAG CUGUGUAUAAGa ug aa ga   gag  g
  |||| |||||| |||||||||||| || || ||   |||   
  ACAC UAACUC GACACGUAuucu gc uu cu   cuu  c
AC    G      G            -  -  g  aug   gc 


mirna_id: cel-mir-2208a
hairpin:
--         C   U   A      --a  a 
  AAGUGUACC GAA CUG UAUCCu   uc u
  ||||||||| ||| ||| ||||||   ||  
  UUCAUAUGG CUU GAC GUAgga   ag c
AC         U   U   -      aaa  u 


mirna_id: cel-mir-2208b
hairpin:
--         CG      A      aucac 
  AAGUGUACC  GAUCUG UAUCCu     c
  |||||||||  |||||| ||||||      
  UUCACAUGG  UUAGAC GUAgga     a
AC         UU      -      gaaaa 


mirna_id: cel-mir-2209a
hairpin:
--G         A  CU    C   -   guau 
   AGUGUAACC CU  UCUC UUC cga    u
   ||||||||| ||  |||| ||| |||     
   UCACAUUGG GA  AGAG Aag gcu    g
ACA         C  CU    -   a   auua 


mirna_id: cel-mir-2209c
hairpin:
--G          CAC     G     aaacu 
   AGUGUAACCG   GUCUU UUUca     c
   ||||||||||   ||||| |||||      
   UCACAUUGGC   CAGAA Aaggu     a
ACA          CAC     A     auaua 


mirna_id: cel-mir-2210
hairpin:
--A  C   U     AAU       u    a 
   GG AGA CAAUC   UUUUAGG uuau u
   || ||| |||||   ||||||| ||||  
   CC UCU GUUAG   GAAAUcc aaua a
CAC  A   C     -CU       u    a 


mirna_id: cel-mir-2211
hairpin:
--C    A    UUC  C       --      
   CUCC UCUA   UC AUCUGAC  Gacgu 
   |||| ||||   || |||||||  |||| c
   GAGG AGAU   AG UGGACUg  cugcc 
AAA    -    UUA  A       cc      


mirna_id: cel-mir-2212
hairpin:
--    AG    UAG   G      caagc 
  UGGC  AUCA   GCU ACUUUG     a
  ||||  ||||   ||| ||||||     u
  ACCG  UAGU   CGG UGAAac     u
CU    AA    UUA   -      auauu 


mirna_id: cel-mir-2213
hairpin:
--U     -A     C         c u 
   GGCGG  CUCUU ACAGUUUGA c c
   |||||  ||||| ||||||||| | g
   CCGUC  GAGAA UGUCGAAcu g g
AAU     AG     -         a a 


mirna_id: cel-mir-2214
hairpin:
--AU      C  ----A         uuaucuu 
    UCGGUC GG     GUCAAUGGG       u
    |||||| ||     |||||||||        
    GGCCAG UC     CAGUUACcc       c
UUGC      U  AACAA         cccaaaa 


mirna_id: cel-mir-2215
hairpin:
--                 G      uaguuc 
  ACAGCACGUGUUACGAU CUCCgu      g
  ||||||||||||||||| ||||||      g
  UGUUGUGCGCGAUGCUA GAggca      a
UU                 A      uuuuug 


mirna_id: cel-mir-2216
hairpin:
--             C          ca 
  GCACAUUUUAAGU GGUAGGCguc  a
  ||||||||||||| ||||||||||  u
  CGUGUAAAAUUCA CUAUCcguag  u
UC             U          uu 


mirna_id: cel-mir-1832b
hairpin:
--             G           ----   a 
  CAGCGAAUCGCUC GCCCACUUUug    uga c
  ||||||||||||| |||||||||||    ||| c
  GUCGCUUAGCGAG CGGGUGAaaac    acu a
UA             A           ugcg   a 


mirna_id: cel-mir-2217
hairpin:
-- AG  UG    GUC  U        a au 
  C  AG  GGCA   GG GUCGAUCu c  c
  |  ||  ||||   || |||||||| |  a
  G  UU  CCGU   CC CAGCUgga g  u
UG CU  GU    GUU  -        c cu 


mirna_id: cel-mir-2209b
hairpin:
---  UG    AA   U    C   -   aaac 
   AG  UAAC  CUC UCUC UUC cga    c
   ||  ||||  ||| |||| ||| |||     
   UC  GUUG  GAG AGAG Aag gcu    a
ACU  GU    GC   U    -   a   aaua 


mirna_id: cel-mir-2218a
hairpin:
--         AGU   AA        aaa 
  CAAACUACA   UUU  GCCUCAcc   a
  |||||||||   |||  ||||||||    
  GUUUGAUGU   AAG  CGGAgugg   g
AU         GAU   AC        guu 


mirna_id: cel-mir-2218b
hairpin:
--AG             UC      -ca    uu 
    ACUACAAACUACA  AUUUUC   ucuc  u
    |||||||||||||  ||||||   ||||   
    UGAUGUUUGAUGU  UAAAag   ggag  g
AGAG             -U      auc    ug 


mirna_id: cel-mir-2219
hairpin:
--A                A         -------   uu 
   CAGCUUUCUCUCGCAC UCGUCagcu       aga  u
   |||||||||||||||| |||||||||       |||  g
   guCGAAAGGGAGCGUG AGCAGUCga       ucu  a
gaa                A         aaguaug   ca 


mirna_id: cel-mir-2220
hairpin:
--     A        U   U     uuc 
  GUAAG CCAUAAAC AUU AUCaa   a
  ||||| |||||||| ||| |||||    
  CAUUC GGUGUUUG UAA Uaguu   u
GA     A        U   C     uac 


mirna_id: cel-mir-2221
hairpin:
-     uuauucuuac      cgaa                 cau      a     aua 
 uacau          uguccu    uacaaacuggcgguuug   ucacuu cauuu   a
 |||||          ||||||    |||||||||||||||||   |||||| |||||   g
 gugua          auaggg    auguuUGAUCGCCAGAC   AGUGAA guaaa   a
a     -----uuuua      -aaa                 CAU      C     aac 


mirna_id: cbr-mir-73b
hairpin:
c   -  aaaau      c     u   -    ga   uc   u  auc 
 guc cc     uccgau cggcu cca cauc  gcc  agc ag   c
 ||| ||     |||||| ||||| ||| ||||  |||  ||| ||    
 cag gg     agguUA GCUGA GGU GUAG  CGG  Ucg uc   a
-   a  -aaau      C     C   U    AA   --   u  aau 


mirna_id: cbr-mir-238
hairpin:
u       a  c   ugaauau      u      u c     u   a     uaua     g 
 ucuucuu uc uca       gacugu ugggug c uugga gua aaagc    aaucu u
 ||||||| || |||       |||||| |||||| | ||||| ||| |||||    |||||  
 agaagaa ag agu       cuggua ACCUAC G AGCCU CAU UUUcg    uuaga u
-       c  c   -------      C      C U     -   G     ----     a 


mirna_id: cbr-mir-76
hairpin:
     u  uu  -   a           -     u       -   cca 
auccc ca  cg cca uuaggacuuca caaca gcgaaua cca   c
||||| ||  || ||| ||||||||||| ||||| ||||||| |||   u
ugggg gu  gc ggu aaUUCUGAAGU GUUGU UGCUUau ggu   u
     c  cu  a   -           A     -       a   auc 


mirna_id: cbr-mir-35c-1
hairpin:
-       aua uc             cg            a u      uu  aag 
 gaaguug   g  uggaucggaccug  ucaguuuuuauc c gugaua  cc   c
 |||||||   |  |||||||||||||  |||||||||||| | ||||||  ||   a
 cuucagc   c  accuagccuggaC  GGUUAAAAGUGG G CACUau  gg   u
a       aag uu             AU            - C      -u  caa 


mirna_id: cbr-mir-35e
hairpin:
-      uu a    - ---ga          c       c ug  g a      uu  gaa 
 uaaucu  g gguc c     gucggaccug ccugauu u  cu c gugaua  uc   c
 ||||||  | |||| |     |||||||||| ||||||| |  || | ||||||  ||   g
 guuagg  c ccag g     cagccuggaC GGAUUAA A  GG G CACUau  ag   g
c      -- -    u auccc          A       C GU  - C      -u  auc 


mirna_id: cbr-mir-35c-2
hairpin:
-  c    u    cg   c   c    g        uu  aag 
 ga ucgg ccug  cca uuu cacc cggugaua  cc   c
 || |||| ||||  ||| ||| |||| ||||||||  ||   a
 cu agcc ggaC  GGU AAA GUGG GCCACUau  gg   a
c  -    u    AU   U   A    -        -u  caa 


mirna_id: cbr-mir-35d
hairpin:
c      -         C         UG  U        uu  aa 
 ccaguu ccggacacu GCAGGUUUU  CU CGGUGAUa  cg  g
 |||||| ||||||||| |||||||||  || ||||||||  ||   
 ggucaa ggccuguGA CGUUUAAAA  GG GCCACUau  gc  a
-      u         A         GU  -        -u  cg 


mirna_id: cbr-mir-90b
hairpin:
      --ugc    -cc        C   C    --     U        ---     c 
agaucc     agca   auuucaag GGC UUCA  ACGAC AUAUCAAC   cgaau c
||||||     ||||   |||||||| ||| ||||  ||||| ||||||||   |||||  
uuuagg     ucgu   uggaguUC CUG AAGU  UGUUG UAUAGUug   gcuua a
      cuuuu    uuu        A   U    UU     -        agc     a 


mirna_id: cbr-mir-235b
hairpin:
----------ucugaaauc      c     C      U     U      c  ua 
                   uuggau AGGCU UGGUCA GUGCA AUAUUg gc  u
                   |||||| ||||| |||||| ||||| |||||| ||  a
                   gaucug UCCGG ACCAGU CACGU UAUaau cg  u
agacuuugacagaaugaaa      c     U      U     -      -  ua 


mirna_id: cbr-mir-56
hairpin:
-    -a   a  au     ucu            UC    UC   UU     uc    caa 
 ugga  cgg ac  caguu   guucuCAGGGGA  CAGU  CGG  GUGCC  aucu   u
 ||||  ||| ||  |||||   ||||||||||||  ||||  |||  |||||  ||||    
 acuu  gcc ug  gucag   uaaGAGUCUCCU  GUUA  GCC  CACgg  uaga   a
g    ac   a  -c     --c            UC    -U   --     --    ccc 


mirna_id: cbr-mir-54a
hairpin:
     -----     -aa  --            G         CAA   U     -c  ua 
cagga     cgucu   gc  cgauccuuggcU GGAUAUGAG   ACG GUACa  ga  c
|||||     |||||   ||  |||||||||||| |||||||||   ||| |||||  ||  u
guccu     gcgga   cg  gcuaggaacCGA UCUAUACUC   UGC CAUgu  cu  u
     ucgug     aaa  cu            G         UUA   C     cc  ua 


mirna_id: cbr-mir-237
hairpin:
u       ---------    --u     g       UG GAA     C    U  u  aa 
 cuugaaa         acca   guuug uggUCCC  A   UGCUC GACA CU cg  g
 |||||||         ||||   ||||| |||||||  |   ||||| |||| || ||   
 gaacuuu         uggu   uaggc accAGGG  U   ACGAG CUGU ga gc  u
-       uuuuaauau    uuu     g       GU ACC     -    C  u  ga 


mirna_id: cbr-mir-1822
hairpin:
    -agaa   u       c       -  aac  -ua      gcacu 
gucu     agg ccgagag cuauccc gg   gc   ucgguu     u
||||     ||| ||||||| ||||||| ||   ||   ||||||     u
caga     uuc gguUCUC GAUAGGG CC   CG   AGCcaa     u
    aagac   -       A       G  ---  UCG      aaaac 


mirna_id: cbr-mir-1834
hairpin:
u     --u   aauacguu         gc          -   uuu 
 gaaau   uuc        ggcuuuuug  uggucucaua ccg   a
 |||||   |||        |||||||||  |||||||||| |||    
 cuuua   gag        CCGAAGAAC  ACUAGAGUau ggu   g
a     cuu   -aaaaaaC         UU          a   cau 


mirna_id: cbr-mir-35b-1
hairpin:
-                 ug    cu   g a      uu   ac 
 uuggaucggaccucugc  guuu  gcc c gugaua  cca  g
 |||||||||||||||||  ||||  ||| | ||||||  |||   
 gaccuagccugGAGAUG  CAAA  UGG G CACUau  ggu  u
a                 GU    AG   - C      -u   ga 


mirna_id: cbr-mir-35b-2
hairpin:
      agucu      a        ug    c u  g        uu - aa 
ucugau     ggaucg aucuuugc  guuu c cu cggugaua  c c  a
||||||     |||||| ||||||||  |||| | || ||||||||  | |  u
aggcug     ccuagc uaGAGAUG  CAAA G GG GCCACUau  g g  g
      ----c      c        GU    A U  -        uc u aa 


mirna_id: cbr-mir-35b-3
hairpin:
u     ----            c    a     u  g        ---c   a 
 ggucu    ggaucggaccuc accg uuuuu cu cggugaua    ucc a
 |||||    |||||||||||| |||| ||||| || ||||||||    |||  
 ccaga    ccuagccugGAG UGGU AAAAG GG GCCACUau    agg u
a     cuga            A    C     U  -        uagc   g 


mirna_id: cbr-mir-35b-4
hairpin:
-        ---  -              a     u  g        c  caa 
 auggucug   gg ucggaccuuugcca uuuuc cc cggugaua uc   u
 ||||||||   || |||||||||||||| ||||| || |||||||| ||   g
 uaccagac   cc agccugGAGAUGGU AAAAG GG GCCACUau ag   c
c        uga  g              C     U  -        u  cag 


mirna_id: cbr-mir-35b-5
hairpin:
-    a c  a   ----             cg ug c    u  a        cu   aa 
 auga g gu guu    ugggucggaccuc  c  g uuuu cc cggugaua  cca  g
 |||| | || |||    |||||||||||||  |  | |||| || ||||||||  |||  c
 uacu c ca cag    accuagccugGAG  G  C AAAG GG GCCACUau  ggu  a
u    a -  c   gcuc             AU GU A    U  -        -u   ga 


mirna_id: cbr-mir-35b-6
hairpin:
                cg ug     uc  g        uu   aa 
gacuggaucggaccuc  c  guuuu  cc cggugaua  ccg  g
||||||||||||||||  |  |||||  || ||||||||  |||  c
cugaccuagccugGAG  G  CAAAA  GG GCCACUau  ggu  a
                AU GU     GU  -        -u   ga 


mirna_id: cbr-mir-35b-7
hairpin:
-       ----          cg  gu     u  g        - uc aa 
 ggucugg    gucggaccuc  cu  uuuuc cc cggugaua c  c  a
 |||||||    ||||||||||  ||  ||||| || |||||||| |  |  g
 ccaggcu    uagccugGAG  GG  AAAAG GG GCCACUau g  g  a
a       gacu          AU  UC     U  -        u cu aa 


mirna_id: cbr-mir-35b-8
hairpin:
   a   ----              cg ug     uc  g        uu   aa 
cga ggu    cuggaucggaccuc  c  guuuu  cc cggugaua  ccg  g
||| |||    ||||||||||||||  |  |||||  || ||||||||  |||  c
gcu cca    gaccuagccugGAG  G  CAAAA  GG GCCACUau  ggu  a
   a   ugcu              AU GU     GU  -        -u   ga 


mirna_id: cbr-mir-35b-10
hairpin:
---c  a - u              cg ug     uc  g        uu   aa 
    ga g g cuggaucggaccuc  c  guuuu  cc cggugaua  ccg  g
    || | | ||||||||||||||  |  |||||  || ||||||||  |||  c
    cu c c gaccuagccugGAG  G  CAAAA  GG GCCACUau  ggu  a
gcua  a a u              AU GU     GU  -        -u   ga 


mirna_id: cbr-mir-35b-11
hairpin:
c   a   ----        ag    cg ug      u   g        uu   aa 
 cga ggu    cugggucg  ccuc  c  guuuuu acc cggugaua  cca  u
 ||| |||    ||||||||  ||||  |  |||||| ||| ||||||||  |||  a
 gcu cca    gaccuagc  gGAG  G  CAAAAG UGG GCCACUau  ggu  a
-   a   ugcu        cu    AU GU      -   -        -u   aa 


mirna_id: cbr-mir-35b-12
hairpin:
a         ----          cg  gu     u  g        - uc aa 
 auggucugg    gucggaccuc  cu  uuuuc cc cggugaua c  c  a
 |||||||||    ||||||||||  ||  ||||| || |||||||| |  |  g
 uaccaggcu    uagccugGAG  GG  AAAAG GG GCCACUau g  g  a
-         gacu          AU  UC     U  -        u cu aa 


mirna_id: cbr-mir-35b-13
hairpin:
-                 ug  a   u  g  a     --    g 
 cugggucggaccucugc  gu uuc cu cg ugaua  uuuu a
 |||||||||||||||||  || ||| || || |||||  ||||  
 gaccuagccugGAGAUG  CA AAG GG GC ACUau  gaaa a
u                 GU  A   U  -  C     uc    a 


mirna_id: cbr-mir-65
hairpin:
-    ----  u      uC           G G  AAU    gc       
 agac    cc caccaa  AUGACACUGAA C GG   GGaa  guaguc 
 ||||    || ||||||  ||||||||||| | ||   ||||  ||||| a
 ucug    gg gugguU  UACUGUGACUU G CC   CCuu  cguuag 
g    agua  c      CA           G G  -AU    aa       


mirna_id: cbr-mir-1817
hairpin:
u   --u        C  C     CC  G         gu   ----aaa     a 
 uca   auuuugag AG CAAUG  AC ACUGUCAUG  cua       auccg u
 |||   |||||||| || |||||  || |||||||||  |||       ||||| a
 agu   uaaagcuc uc guuac  ug ugacaguac  gau       uaggu g
a   uuu        a  u     -a  g         uu   agccuaa     c 


mirna_id: cbr-mir-2222-1
hairpin:
c       g      uaccagu            cc   -     uc           - a 
 augaaug ucaggu       cgaccugugcug  ucu uucuu  gugauauuuuu c c
 ||||||| ||||||       ||||||||||||  ||| |||||  ||||||||||| | a
 uauuuac agucca       gcuggaCACGAC  AGA AAGAA  CACUAUaaaaa g g
-       -      ----uuu            CU   C     --           u c 


mirna_id: cbr-mir-2227
hairpin:
u     gccacgu     ----    gc        -u      c    u    -c      
 ucuuc       gucuc    caau  ucuucacc  cuauuu cacu ccac  caagu 
 |||||       |||||    ||||  ||||||||  |||||| |||| ||||  |||| a
 agaag       cagag    guua  agaaGUGG  GAUGAA GUGA GGUg  guuua 
g     -------     uuuu    -a        UC      U    C    aa      


mirna_id: cbr-mir-41b
hairpin:
  -     u    g          u        gua      caaaacca 
gc ggauc cucu gccuuggagg uucucauc   gugaua        a
|| ||||| |||| |||||||||| ||||||||   ||||||        a
cg ccuag gagg uggaaCCUUC AAGAGUGG   CACUau        a
  u     -    a          U        -GC      agcauacc 


mirna_id: cbr-mir-64b
hairpin:
   guuauucuuu    aggc      uuc    a   cca    u       au   ag 
ucc          ccga    cccgcc   caug cac   agcg gucugga  gac  a
|||          ||||    ||||||   |||| |||   |||| |||||||  |||   
agg          gguu    gggcgg   GUAC GUG   UCGC CAGGCcu  cug  a
   -aaaaucccu    --ga      caa    G   UAG    -       -c   gu 


mirna_id: cbr-mir-2214
hairpin:
u  uucu   -U    C -----  A         uuaucau 
 ca    cAC  CGGU C     GG GUCAAUGGG       u
 ||    |||  |||| |     || |||||||||       c
 gu    gug  gcca g     cc cgguuaccc       u
u  -uuu   uu    c uucaa  a         uuccaac 


mirna_id: cbr-mir-2223
hairpin:
     uauuuuc   a           C   U      A  aa     caaau     c  a 
uccaa       ggc auuUUUGUACU AUG AAGGUG Ca  gauag     uugac gu u
|||||       ||| ||||||||||| ||| |||||| ||  |||||     ||||| ||  
agguu       ccg uaagaacguga uac uucuac gu  cuauu     aacug ca c
     ---uuuu   g           c   -      -  -a     -----     -  c 


mirna_id: cbr-mir-2224
hairpin:
           -----------        ---g  a     c     u  a    uu      aga 
uuuuuuuuuga           gguucgag    cu ucaag ccaaa ga uacc  ucaacu   a
|||||||||||           ||||||||    || ||||| ||||| || ||||  ||||||   u
agagaaaaacu           ucgagcuu    ga aGUUU GGUUU CU AUGG  AGUUga   c
           uccaguacuag        agca  c     U     -  A    --      aac 


mirna_id: cbr-mir-54b
hairpin:
      -------   c     u         -  c    c    uuuu     cga  u 
gagcac       gag ugauc uugacucga ac ugga aucg    guaca   ag c
||||||       ||| ||||| ||||||||| || |||| ||||    |||||   || a
uucgug       uuc gcuag aacuGAGCU UG ACCU UAGU    CAUgu   uc a
      uaaaaau   c     c         A  U    -    -GCC     -cg  g 


mirna_id: cbr-mir-54c
hairpin:
cguga c          -c     c     uauc  u  ua     caaa 
     g cgauccuuga  uggaa uugga    gu cg  uacag    a
     | ||||||||||  ||||| |||||    || ||  |||||     
     c gcuaggaacu  aCCUU AACCU    CA GC  AUguc    u
--gug u          aa     C     ---U  U  CC     cuga 


mirna_id: cbr-mir-54d
hairpin:
-      ---cua  ug       a  a           ga   u u     ugaaucc 
 aaagcg      gg  auccuug cu ggauauaaaaa  acg g guaca       a
 ||||||      ||  ||||||| || |||||||||||  ||| | |||||       g
 uuuugc      cc  uaggaac GA CCUAUAUUUUU  UGC C CAUgu       u
c      uaguug  gu       c  G           -A   - -     ucauaag 


mirna_id: cbr-mir-2225
hairpin:
a   - ---   u       -      U   UC     G    -   aauucc 
 guc c   cuc cuuuguc ACCGCU CCU  CUUGC CACa ccu      a
 ||| |   ||| ||||||| |||||| |||  ||||| |||| |||       
 cag g   gag ggaauaG UGGCGA GGA  GAACG GUgu gga      g
a   a uua   -       A      C   CA     -    a   aaugau 


mirna_id: cbr-mir-2226
hairpin:
-    --         u  A   A    GA   A   GC       ccaau 
 ggcu  agacaugcc gc AUG CACA  AGA CUG  AAUGaaa     a
 ||||  ||||||||| || ||| ||||  ||| |||  |||||||     c
 ccga  ucugugcgg CG UAC GUGU  UCU GGC  UUAcuuu     u
a    uc         u  A   C    -G   -   -A       auuca 


mirna_id: cbr-mir-74b
hairpin:
   -    -uucaa   c         u        U   UC  GUUC        aug 
gcu acua      gcc cugccacac uuUGGACU CCU  UC    CCAGCaaa   c
||| ||||      ||| ||||||||| |||||||| |||  ||    ||||||||    
uga uggu      cgg gacggugug aGACCUGA GGA  AG    GGUcguuu   a
   g    uuuuga   c         u        C   UC  -AAC        gac 


mirna_id: crm-mir-786
hairpin:
a      uuc     -aa  c     a         ac        u   uacaa 
 guaagu   gggac   gu ccaau gagucucgg  agggcauu aca     g
 ||||||   |||||   || ||||| |||||||||  |||||||| |||     a
 uauuua   ccuug   ua gguUA CUUAGAGUC  UCCCGUAA Ugu     u
-      -ca     cac  u     C         GU        -   uuaaa 


mirna_id: crm-mir-41
hairpin:
      uaaguuua      cc  a                c    g a       accauca 
gaaagg        acaggu  cc ugaccuugguaguuuu cgcc c gugauau       a
||||||        ||||||  || |||||||||||||||| |||| | |||||||        
uuuucc        ugucca  gg gcuggaaCCAUCAAAA GUGG G CACUaua       u
      --------      cu  -                A    - C       gcaaaac 


mirna_id: crm-mir-40
hairpin:
    -cu       a            u    g a      -----  -  gc 
aacc   gcccgua ccuaguugaugu cauc c gugaua     ug ac  a
||||   ||||||| |||||||||||| |||| | ||||||     || ||   
uugg   ugggcgu gGAUCGACUACA GUGG G CACUau     ac ug  u
    acu       g            U    - C      uccuu  a  ac 


mirna_id: crm-mir-39
hairpin:
u     -     -     c     u   uuuc      a   aa uuc 
 gagau ccaga gagcc aacug uuc    cccggu aua  c   a
 ||||| ||||| ||||| ||||| |||    |||||| |||  |    
 uucua ggucu cucgG UUGAC AAG    GGGCCA Uau  g   a
-     u     u     A     U   -UAU      C   ca cac 


mirna_id: crm-mir-77-2
hairpin:
uucaaaauaaaaagagcuguuaguuuggauggcugugcucugaggaaacacggugucauUUCAUCAGGCCAUAGCUG         cg  uc  - ac 
                                                                             UCCaaaacu  uu  cc c  u
                                                                             |||||||||  ||  || |   
                                                                             agguuuugg  aa  gg g  a
-----------------------------------------------------------------------------         ag  uu  c aa 


mirna_id: crm-mir-49
hairpin:
     uuua      --   a  g   c         ua  au     c     - a 
guaag    gaacaa  ucu cc auc gcaguuucu  ug  gugcu cgagc c a
|||||    ||||||  ||| || ||| |||||||||  ||  ||||| ||||| | c
cguuu    cuuguu  agg gg uaG CGUCGAAGA  AC  CACGA gcuug g a
     -uac      ug   a  -   A         GC  --     A     u u 


mirna_id: crm-mir-57
hairpin:
u      gaaua      gacug  u    c    C     A  G    G     uu   a 
 aaguuu     ucucau     uu ucgu UACC UGUAG UC AGCU UGUGU  uga g
 ||||||     ||||||     || |||| |||| ||||| || |||| |||||  ||| u
 uucgag     agagua     aa agca gugg acguc ag ucga acaca  acu g
-      -----      ----a  c    a    a     -  a    -     -u   u 


mirna_id: crm-mir-35a-1
hairpin:
-  u  c        u   ug  -   c      u   -   cu 
 gc gg uuggaccu ugc  gu uuc cucggu aua uuu  a
 || || |||||||| |||  || ||| |||||| ||| |||   
 cg cc aaccugga GUG  UA AAG GGGCCA Uau aaa  a
c  -  u        C   GU  C   U      C   c   aa 


mirna_id: crm-mir-35b
hairpin:
                 a ac       ug  u        uu   a 
ucggugggaucggaccu c  ugguuuu  cu cggugaua  uca g
||||||||||||||||| |  |||||||  || ||||||||  |||  
agccacucuagccugga G  ACUAAAA  GG GCCACUau  agu a
                 C GA       GU  -        -u   a 


mirna_id: crm-mir-35c-1
hairpin:
     c           a a            g        cu  ga 
ucggu ggaucggaccu c cugguuuucgcu cggugaua  uc  g
||||| ||||||||||| | |||||||||||| ||||||||  ||   
agcca cuuagccugga G GACUAAAAGUGG GCCACUau  ag  a
     c           C G            -        -u  ua 


mirna_id: crm-mir-35d-1
hairpin:
a   c           c a            u    c   uu   a 
 ggu ggaucggcccu c cugguuuucgcc cggu aua  uca g
 ||| ||||||||||| | |||||||||||| |||| |||  |||  
 cca cuuagccggga G GACUAAAAGUGG GCCA Uau  agu u
-   c           C A            -    C   -u   a 


mirna_id: crm-mir-35e-1
hairpin:
     ---    a      ug     ga       a    accag 
augac   ggga ccgugc  guuuc  acucggu auag     a
|||||   |||| ||||||  |||||  ||||||| ||||      
ugcug   cccu gGCAUG  CAAAG  UGGGCCA Uauc     a
     agc    g      GU     -G       C    gaaag 


mirna_id: crm-mir-35f
hairpin:
  ug  ----cu    gac    a   u  ug     g    u   a    gacuaaa 
au  ca      ugac   ggga cag gc  augcc accu ggu auag       c
||  ||      ||||   |||| ||| ||  ||||| |||| ||| ||||       u
ua  gu      acug   cccu gUC UG  UACGG UGGG CCA Uauc       g
  gu  uauccu    auu    g   U  GU     G    -   C    gaacagu 


mirna_id: crm-mir-35e-2
hairpin:
     ga     a      ug     g   u    a      c auau 
cugac  gggga ccgugc  guuuc acc cggu auaggu c    a
|||||  ||||| ||||||  ||||| ||| |||| |||||| |    u
gacug  ccccu gGCAUG  CAAAG UGG GCCA Uaucca g    g
     ag     g      GU     G   -    C      a aaga 


mirna_id: crm-mir-83
hairpin:
a   a - -a u      a              u  a  u  -  --  - a 
 ggc c c  c cggaaa acugaguuuaugug gu cu ga cg  gc c c
 ||| | |  | |||||| |||||||||||||| || || || ||  || |  
 ccg g g  g gcuuuU UGACUUAAAUAUAC CA GA cu gc  cg g u
-   a a ag u      A              -  C  U  a  aa  a c 


mirna_id: crm-mir-77-1
hairpin:
a    guaaa    --  u                 cu    g     ac   uca 
 aacu     gagc  ug uaguuuggauggcugug  cuga gaaau  ggc   u
 ||||     ||||  || |||||||||||||||||  |||| |||||  |||   a
 uuga     cuug  ac auuaaaCCUGUCGAUAC  GACU CUUua  cug   a
-    --aag    ua  u                 CG    A     --   uaa 


mirna_id: crm-mir-232-1
hairpin:
c    u    ugaa   ug -uug       u        uc   -     u   -  aucu 
 gagg aagu    guc  a    ucggauc ccguaguu  gau cauuu auc cu    c
 |||| ||||    |||  |    ||||||| ||||||||  ||| ||||| ||| ||    c
 cuuu uuca    cag  u    agucuaG GGCGUCAA  CUA GUAAA Uag ga    a
-    u    ----   gu cuua       U        UU   C     -   c  aaca 


mirna_id: crm-mir-228
hairpin:
-   c    -        A    C         A   A   -a  cau 
 auc uauc uuguucgc AUGG ACUGCAUGA UUC CGG  ug   u
 ||| |||| |||||||| |||| ||||||||| ||| |||  ||    
 uag gugg gacaggcg uacc uggcguacu agg gcc  ac   g
a   a    u        a    a         -   c   ag  agc 


mirna_id: crm-mir-90
hairpin:
u    -----       -ac      c         -    u  c     -  auauac 
 guuu     gggccuc   uucgag gguauucaa cgac au ucaac cg      a
 ||||     |||||||   |||||| ||||||||| |||| || ||||| ||       
 caaa     cccggag   aaguUC CCGUAAGUU GUUG UA AGUug gc      u
a    ugauc       cuc      C         U    -  U     a  caacca 


mirna_id: crm-let-7
hairpin:
     c  -ucaaca    gc              U  G            ga ucu 
gcggc gg       cugu  gucuggUGAGGUAG AG UUGUAUAGUUua  a   u
||||| ||       ||||  |||||||||||||| || ||||||||||||  |    
cgucg cu       gaca  uagaccacuccauc uu aacguaucaagu  u   a
     a  cuucuaa    --              u  g            gg ucc 


mirna_id: crm-mir-238
hairpin:
-    aacgu       ugugau             a  -    c   a       --    cgu 
 aguc     ggaccac      accauuugggugg ca cgga gua aaagcua  ugcc   g
 ||||     |||||||      ||||||||||||| || |||| ||| |||||||  ||||    
 uuag     uuuggug      ugguaaaCUUACC GU GCCU CAU UUUcgau  augg   g
g    ---gu       ---ugu             -  A    -   G       uu    auu 


mirna_id: crm-mir-75
hairpin:
-     uu -    g            aua     a    c g   au 
 augca  g auga uugaagucgguu   agcuu aaua a aac  a
 |||||  | |||| ||||||||||||   ||||| |||| | |||   
 uacgu  c uacu gaCUUCAGCCAA   UCGAA UUau u uug  c
a     uu a    a            CCA     A    - g   cc 


mirna_id: crm-mir-74a
hairpin:
u   cg    c   ggaa     cg             u    c    uc     -  a     
 gac  aaga gcu    aaggu  acacguuuggacu ccgu ucuu  ccagc ug uauu 
 |||  |||| |||    |||||  ||||||||||||| |||| ||||  ||||| || ||| g
 cug  uucu cga    uucca  uguguaGACCUGA GGUA AGAA  GGUcg ac auag 
a   --    -   --ac     ca             C    A    -C     u  g     


mirna_id: crm-mir-74b
hairpin:
c   -           a      u   ca    uc      aaacu 
 agc ccgccacacau ugggcu ccu  ucuu  ccagcg     a
 ||| ||||||||||| |||||| |||  ||||  ||||||     c
 ucg ggcggugugua AUCUGA GGA  AGAA  GGUcgc     u
-   u           C      C   AC    -C      auuaa 


mirna_id: crm-mir-73
hairpin:
-   c    --    -  u  a           u  -     aa   uc   uaucgaa 
 cag gaga  gguc cc ca acgacugagcu cc acguc  gcc  agc       u
 ||| ||||  |||| || || ||||||||||| || |||||  |||  |||        
 guc cuuu  ccag gg gu uguUGACUUGA GG UGUAG  CGG  Ucg       g
a   -    aa    a  c  a           C  A     AA   --   uuaaaaa 


mirna_id: crm-mir-76
hairpin:
-    --  ----     u           -      u      ccu    c 
 cccg  uc    caccu uuaggacuuca cgacaa cgaaua   ucca a
 ||||  ||    ||||| ||||||||||| |||||| ||||||   |||| c
 gggc  ag    guggg aaUUCUGAAGU GUUGUU GCUUau   aggu a
g    ua  uucu     u           A      -      ---    c 


mirna_id: crm-mir-61
hairpin:
-  guaa      uc               c  cg  u    c  -   a 
 gc    uaucgg  uuccgaguuggguca gg  cu aguc uu ccg c
 ||    ||||||  ||||||||||||||| ||  || |||| || ||| a
 cg    guagcc  agggcuCGACUCGGU CC  GA UCAG aa ggu u
a  ---a      uc               U  AA  -    U  c   a 


mirna_id: crm-mir-242
hairpin:
-    ---gu     cca         -       U   CCU     U    -  aaac 
 ucga     accaa   cguuaagaa uaUUGCG AGG   UUGCU CGaa ag    a
 ||||     |||||   ||||||||| ||||||| |||   ||||| |||| ||     
 aguu     ugguu   guaguuuuu auaacgc ucc   aacga gcuu uc    c
g    aaaau     uaa         u       c   ucu     c    g  auuu 


mirna_id: crm-mir-70
hairpin:
a      a  agaac                -u     c      -  aaac 
 ugaacg gg     agcuauaggaauaccg  ugaug auuaca cu    a
 |||||| ||     ||||||||||||||||  ||||| |||||| ||    u
 acuugc cc     uugaUAUCCUUGUGGU  ACUGC UAAUgu ga    u
a      -  ----a                UU     A      a  aagu 


mirna_id: crm-mir-249
hairpin:
u       acg             a        u    gc      uau 
 guuuucu   ugacuagcaacgc caaaaguu cugu  gacaaa   g
 |||||||   ||||||||||||| |||||||| ||||  ||||||    
 uagaaga   guugauCGUUGCG GUUUUCAG GACA  CUguuu   a
-       -aa             A        -    --      uaa 


mirna_id: crm-mir-231
hairpin:
a     ---    c    -------u         a     -uc   -         u  cuc 
 aucga   gcac ccga        guuguucug cuguu   cau agcuuauau gu   a
 |||||   |||| ||||        ||||||||| |||||   ||| ||||||||| ||    
 uaguu   cgug gguu        caacaGGAC GACAA   GUG UCGAAUaua cg   a
-     uua    u    uuucuggu         G     CAA   C         -  uaa 


mirna_id: crm-mir-85
hairpin:
a     c     gaag       c       - c         a     guacu 
 gaaga guucu    ucggagc cgucuuu c aauauuuug aacca     c
 ||||| |||||    ||||||| ||||||| | ||||||||| |||||     a
 cuucu cgaga    agucuCG GCGGAAA G UUAUGAAAC Uuggu     u
-     -     --ag       U       A C         A     aaacg 


mirna_id: crm-mir-42
hairpin:
c         uc                 uc  uuuu        ----uu    c 
 aaacccuug  ggaccuuuguggauguu  cu    cggugaag      guuc g
 |||||||||  |||||||||||||||||  ||    ||||||||      ||||  
 uuugggagc  ccuggaGACAUCUACAA  GG    GCCACUuc      uaag u
-         -u                 UU  ----        uucuau    u 


mirna_id: crm-mir-43
hairpin:
-  gc   u     c      a    -     u     u   -   agaga 
 ag  gau cugcc gugaca caag aaacu gugau aug ccu     a
 ||  ||| ||||| |||||| |||| ||||| ||||| ||| |||     u
 uc  cug ggcgg CGCUGU GUUC UUUGA CACUA Uac ggg     g
g  ua   u     a      C    A     -     -   a   aagaa 


mirna_id: crm-mir-252
hairpin:
-    -  ----        A       U  U  C C      -   cuca 
 gguc uc    uuucaguu UAAGUAG AG GC G AGGUaa cca    a
 |||| ||    |||||||| ||||||| || || | |||||| |||     
 ccag ag    aaaguuaa auucguc uc cg c uccauu ggu    a
g    u  cuau        g       u  -  u a      u   auau 


mirna_id: crm-mir-355
hairpin:
  ug uauuuaug       -    a    U         -CU           uau 
gu  a        ucauuug ucga uggU UGUUUUAGC   GAGCUAUGUgu   u
||  |        ||||||| |||| |||| |||||||||   |||||||||||    
ca  u        aguaaau ggcu acca acaaaauug   uucgauacaua   g
  gu --uuucca       u    a    u         uuc           cac 


mirna_id: crm-mir-239b
hairpin:
-      ---ac    a          U C       CU    cu   cu 
 aagaca     uugc auuUUUGUAC G ACAAAAG  CUGa  gcu  g
 ||||||     |||| |||||||||| | |||||||  ||||  |||  a
 uucugu     agcg uaaaaacgug c uguuuuc  gacu  cgg  u
u      cuaua    g          u -       ac    --   ua 


mirna_id: crm-mir-787
hairpin:
u   ca      ---  u        u     -        -u  u   u  c   --  aau 
 cca  uggaua   ug gggaccag ggaug agggaaac  ag cga cu aca  cu   u
 |||  ||||||   || |||||||| ||||| ||||||||  || ||| || |||  ||    
 ggu  acuugu   ac cccugguc ucuaC UCCUUUUG  UC GCU GA Ugu  ga   u
-   -a      uca  c        -     G        UU  U   C  A   aa  cag 


mirna_id: crm-mir-34
hairpin:
-    --g   c   -a A       -U   U     G   -  uau 
 ggac   gug ucg  g GGCAGUG  GGU AGCUG UUG ca   u
 ||||   ||| |||  | |||||||  ||| ||||| ||| ||    
 ccug   uac agc  c ccgucac  cca ucggc aac gu   g
a    aug   a   cc a       uu   -     -   a  uaa 


mirna_id: crm-mir-82
hairpin:
a       -cu      a       c u       g    -   caa 
 aguucuu   agcgac gguuuuc c gugaucu caga gua   a
 |||||||   |||||| ||||||| | ||||||| |||| |||    
 ucaagaa   uuguUG CCGAAAG G UACUAGA GUcu cau   g
-       ccu      A       U C       -    a   aaa 


mirna_id: crm-mir-233
hairpin:
-  -a     - uc          u   - c        c    u  ca  ag 
 ug  agcgu c  ucugucccgc cau c uguuguuc aaua uc  ac  c
 ||  ||||| |  |||||||||| ||| | |||||||| |||| ||  ||   
 ac  ucgua g  agacaGGGCG GUA G GUAACGAG UUau ag  ug  c
u  cg     u uu          U   C C        -    u  --  ac 


mirna_id: crm-mir-124
hairpin:
      --      u      a    uga   a       -   c  c 
uccaga  ugucac uggcau cacc   gug cuuuagu gga au u
||||||  |||||| |||||| ||||   ||| ||||||| ||| || c
aggucu  acggug aCCGUA GUGG   CAC GGAAUca ccu ug a
      ua      c      A    -CG   -       a   u  a 


mirna_id: crm-mir-47
hairpin:
      --    -   ugaga           -a      u      uc  uuc 
gaaaaa  agcc gag     cugaagagagc  uucugu gacagu  ga   c
||||||  |||| |||     |||||||||||  |||||| ||||||  ||    
cuuuuu  ucgg cuc     gaCUUCUCUCG  GAGGUA CUGUca  cu   g
      ga    u   uagug           CG      -      uc  caa 


mirna_id: crm-mir-790-2
hairpin:
u     -ucaa    c ----u    a   C   G    C  G   A       c      
 ucaaa     gguc c     uuug cug UUG CACU GC AAC CCGCGau uuauc 
 |||||     |||| |     |||| ||| ||| |||| || ||| ||||||| |||| a
 aguuu     ucag g     aagc gac aac gugg cg uug ggcgcua aauag 
a     uucac    a uuugu    g   c   g    c  a   a       -      


mirna_id: crm-mir-248
hairpin:
   aguauuuuu      --a  uu     u    a     -a  -   u        uag 
gcu         uggcag   ga  acgau agcg uaucc  gc cgu guauucaa   c
|||         ||||||   ||  ||||| |||| |||||  || ||| ||||||||    
uga         accguu   uu  ugcua UCGC AUAGG  CG GCA CAUGaguu   g
   guuagcuuc      aug  uu     C    -     CA  U   -        uac 


mirna_id: crm-mir-58a
hairpin:
c    -ugau    gccauauc        C    - UU  C        a   ccucc 
 cguu     gcuc        ccauUGCC UACU A  CG AUCUCAUC cuu     a
 ||||     ||||        |||||||| |||| |  || |||||||| |||     g
 gcaa     cgag        gguaacgg auga u  gc uagaguag gaa     u
-    uauau    -----aaa        c    c uu  -        -   uauaa 


mirna_id: crm-mir-236
hairpin:
  uuu      -c    -         -       uu  a    u   -  g  ua 
uc   ggugac  gaug uccagcguc uuaccug  ca uauu aga cu au  g
||   ||||||  |||| ||||||||| |||||||  || |||| ||| || ||   
ag   uuacug  cuau aggUCGCAG AAUGGAC  GU AUAA Ucu ga ua  c
  uau      uu    u         U       -U  C    -   a  g  cu 


mirna_id: crm-mir-35a-2
hairpin:
-  u           u   ug  u      u    u   cu   a 
 gc ggauuggaccu ugc  gu uucacc cggu aua  uca g
 || ||||||||||| |||  || |||||| |||| |||  |||  
 cg ccuaaccugga GUG  UA AAGUGG GCCA Uau  agu u
a  u           C   GU  C      -    C   -u   g 


mirna_id: crm-mir-35c-2
hairpin:
-  uauu   ug     ---------         -  a            u        uu  aa 
 cc    auc  gucgg         aucggaccu cc cugauuuucgcu cggugaua  uc  g
 ||    |||  |||||         ||||||||| || |||||||||||| ||||||||  ||   
 gg    uag  cggcc         uagccugga GG GACUAAAAGUGG GCCACUau  ag  a
a  ---u   gu     cuuaccccu         C  -            -        -u  ca 


mirna_id: crm-mir-230
hairpin:
-      --      auA        -    U           ----  u 
 gauguu  guaccg   CUUGGUCG ACAA CUAAUAUUauc    gg u
 ||||||  ||||||   |||||||| |||| |||||||||||    || c
 cuacaa  uauggc   GGACCAGC UGUU GAUUAUGauag    cc u
a      uu      aGA        G    -           aaga  g 


mirna_id: crm-mir-52-1
hairpin:
u   c    cu    u C       C  A   UUC    C    cau 
 acc ucua  accg c ACCCGUA AU UGU   CGUG Uuga   u
 ||| ||||  |||| | ||||||| || |||   |||| ||||    
 ugg ggau  uggc G UGGGUAU UA ACA   GCAC aacu   g
-   c    uc    c C       A  -   -UU    u    cgu 


mirna_id: crm-mir-55
hairpin:
a    -  ag   c  aaa    cau   a             CU  -     ----     c 
 gagu cc  acu gg   gucg   ggg cuCGGCAGAAGCA  UG GGGUA    Uacuu a
 |||| ||  ||| ||   ||||   ||| |||||||||||||  || |||||    |||||  
 uuca gg  uga cc   cagu   ccc GAGUCGUCUUUGU  AU CCCAU    augag c
-    u  cu   -  --a    --c   -             UU  G     auca     a 


mirna_id: crm-mir-237
hairpin:
-      -cccaguu     -c    g    C      A      U       uu  aa 
 guauuc        accgu  uuug uggU CCUGAG AUGCUC GACUGCU  cg  g
 ||||||        |||||  |||| |||| |||||| |||||| |||||||  ||  u
 cauaag        uggca  aaau aCCA GGAUUC UAUGAG CUGACga  gc  a
c      uuuuuucu     uu    g    A      C      -       -c  ac 


mirna_id: crm-mir-79
hairpin:
-   --uaucaa     --aa  uu    u          UC     AA    ---ua   uc 
 gaa        auaga    gu  ccga CUUUGGUGAU  AGCUU  AUGa     gac  a
 |||        |||||    ||  |||| ||||||||||  |||||  ||||     |||  a
 cuu        uaucu    cg  ggcU GAAACCAUUG  UCGAA  UAcu     uug  u
u   uuuuuuuc     aagc  gc    C          GA     -A    ucaga   ua 


mirna_id: crm-mir-235
hairpin:
     uaca    gaaaauca          UU   C  A    U     -  ucag 
augga    aucu        agaucAGGCC  GGC GA UGCA AUAUU gc    u
|||||    ||||        ||||||||||  ||| || |||| ||||| ||    u
uacuu    uaga        ucuaGUCCGG  CCG CU ACGU UAUaa cg    g
     ----    -augaaaa          CC   -  C    -     u  uuaa 


mirna_id: crm-mir-84
hairpin:
u        ---     aca      u           U U    C   C    cac 
 acgaaaca   gucua   gaagca cUGAGGUAGUU G AAUG UGU Gacg   u
 ||||||||   |||||   |||||| ||||||||||| | |||| ||| ||||    
 uguuuugu   cagau   uuuugu GGCUCCGUCAA C UUAC ACA cugu   g
-        uuu     ---      C           - U    U   u    aau 


mirna_id: crm-mir-60
hairpin:
a     ------ u   u    AG        -   A     A   a   au 
 aaccg      c ugu cuug  CUAGAAAG GUG CAUAA AUC ugu  a
 |||||      | ||| ||||  |||||||| ||| ||||| ||| |||   
 uuggc      g aca gaaC  GAUCUUUU CAC GUAUU Uag gca  a
-     uauuua u   -    CA        A   -     A   c   ac 


mirna_id: crm-mir-48
hairpin:
-    cc   u u    G     UC  U     CGauca   uu       
 caua  gga g UGAG UAGGC  AG AGAUG      gag  gugccu 
 ||||  ||| | |||| |||||  || |||||      |||  ||||| c
 guau  ccu C GCUC AUCCG  UC UCUAC      cuc  ugcgga 
u    uu   u C    A     -U  U     -----A   cu       


mirna_id: crm-mir-1
hairpin:
-     --------    ag           C      GC     -    au 
 gcugu        gccg  cugCAUACUUC UUACAU  CCAUa cuau  c
 |||||        ||||  ||||||||||| ||||||  ||||| ||||  a
 cggca        uggc  gaUGUAUGAAG AAUGUA  GGUau ggua  g
u     aaaaguuu    aa           A      -A     a    au 


mirna_id: crm-mir-72
hairpin:
     ------------      --     a  uA    AG    U   AU      a   aa 
ccgua            agacuc  gucaa gc  GGCA  AUGU GGC  AGCUGa ugc  u
|||||            ||||||  ||||| ||  ||||  |||| |||  |||||| |||   
gguau            ucugag  cgguu cG  CCGU  UACA CCG  UCGAcu gcg  u
     cccuauuuuuaa      au     a  CA    CA    -   GC      c   gu 


mirna_id: crm-mir-81
hairpin:
-   c   -   a    uC         CU      G   ---  uaaa 
 ccu gug gcc gcag  GGUUUUCAC  UGAUCU AGa   gc    c
 ||| ||| ||| ||||  |||||||||  |||||| |||   ||     
 gga cac ugg cguU  UCGAAAGUG  ACUAGA Ucu   cg    a
c   -   a   a    GA         CU      G   auu  uaau 


mirna_id: crm-mir-246-1
hairpin:
a    aaacaaua       A    G     UU            gaa 
 gucc        gaacagc CCUG CCGAU  CAUGUAAUAUcu   a
 ||||        ||||||| |||| |||||  ||||||||||||   a
 uagg        uuugucG GGAU GGCUA  GUACAUUauaga   g
-    -aaaugag       A    G     -U            aaa 


mirna_id: crm-mir-2
hairpin:
       -a   a    C        -     C   U    Uugaauc 
auaguau  cgg aagc CGUCAAAG UGGCU GUG UAUG       u
|||||||  ||| |||| |||||||| ||||| ||| ||||       u
uaucaug  guc uuCG GUAGUUUC ACCGA CAC AUac       g
       aa   c    U        G     -   U    uaaugaa 


mirna_id: crm-mir-784
hairpin:
-        ---u     u     A     CU  C       -  ug   
 acuuugcg    uaccg aUGGC CAAUA  UG AUGUAGa cg  ac 
 ||||||||    ||||| ||||| |||||  || ||||||| ||  | g
 ugaaacgu    auggc UACCG GUUAU  AC UACAUcu gu  uu 
u        ucuu     C     A     CU  A       a  gu   


mirna_id: crm-mir-45
hairpin:
a     --accaaaac      c          -   GU         uaa   cau 
 acugu          gugcca gCUGGAUGUG CUC  UAGUCAUaa   ccu   u
 |||||          |||||| |||||||||| |||  |||||||||   |||   u
 ugaca          cgcggu CGACUUACAC GAG  AUCAGUauu   gga   a
-     aauaucaagc      U          A   --         --c   aug 


mirna_id: crm-mir-250
hairpin:
     -uauucga   uc   --      cc  U    U     C     C  -   acuu 
gcugu        agg  uuc  ggaccg  CC UCAG UGACU GUGAU CG ccg    u
|||||        |||  |||  ||||||  || |||| ||||| ||||| || |||    g
uggua        ucc  aag  ucuggc  GG AGUC ACUGA CACUA gc ggu    a
     uuauuaua   uu   uu      aU  U    C     -     A  a   auau 


mirna_id: crm-mir-87
hairpin:
c   u    cc       -       C     C U    A   -  -    c 
 agg ugug  uuccggc CGCCUGA ACUUU G CUCA CCU cg cugu u
 ||| ||||  ||||||| ||||||| ||||| | |||| ||| || |||| g
 ucc acac  aaggcCG GUGGACU UGAAA C GAGU Gga gc gaua a
-   u    --       U       U     - -    -   u  u    u 


mirna_id: crm-mir-244
hairpin:
c     uuccuu u    uuu      cU         UAC           -   cuu  c 
 uauua      c ccag   cucgau  CUUUGGUUG   AAAGUGGUAUG gca   cu a
 |||||      | ||||   ||||||  |||||||||   ||||||||||| |||   ||  
 auaau      g gguu   gagcua  GAAAUCGGC   UUUCGCCAUac cgu   ga a
c     --uacu u    ucu      aG         --U           u   -cu  u 


mirna_id: crm-mir-86
hairpin:
a  a    ----      -           G   U   A   U    ----     
 cg gucg    gcgccg ucUAAGUGAAU CUU GCC CAG Cuuc    gacc 
 || ||||    |||||| ||||||||||| ||| ||| ||| ||||    ||| a
 gc cagc    ugcggc ggAUUCGCUUA GAA CGG GUC gaag    cugu 
g  a    uuuu      c           -   U   -   c    uaaa     


mirna_id: crm-mir-44
hairpin:
-     gaau      u         -   GU        -   gaauca 
 ugaga    ggccga CUGGAUGUG CUC  UAGUCAUa gac      c
 |||||    |||||| ||||||||| |||  |||||||| |||      a
 acucu    ccgguU GACUUACAC GAG  AUCAGUau cug      g
a     aggu      C         A   --        a   acaaaa 


mirna_id: crm-mir-50
hairpin:
       -        c           G    CUUG      auacu 
cccaccc ccuggccg UGAUAUGUCUG UAUU    GGUUcg     c
||||||| |||||||| ||||||||||| ||||    ||||||     u
ggguggg gggccggC GCUAUGCAGAC AUGA    CCAagc     g
       a        A           G    --AA      aaaaa 


mirna_id: crm-mir-64c
hairpin:
-     ---uuaacca a   -        a A         C    AA      -   auc 
 auaca          g ggc cucgccga U UGACACUGA GCUU  UAUGGa ccg   u
 |||||          | ||| |||||||| | ||||||||| ||||  |||||| |||    
 uaugu          c ccg gagcggcU A ACUGUGACU CGAA  AUACcu ggc   c
u     uaaucccccg c   u        C A         -    -A      a   ccc 


mirna_id: crm-mir-64d
hairpin:
   g   u a cc    ugcuu               AA  C      U   -  gaua 
uca agu c g  gccc     gccagcUAUGACACU  AG GUAGCA GGa cc    g
||| ||| | |  ||||     |||||||||||||||  || |||||| ||| ||     
agu ucg g c  uggg     cgguCGGUACUGUGG  UC CAUUGU Ccu gg    a
   g   u c ua    --uuu               AG  -      -   a  gaau 


mirna_id: crm-mir-67
hairpin:
      -au      A    G     -CU      U     gaaac 
uagauu   ucgauc ACUC UUCUG   GGUUGU AUGcu     a
||||||   |||||| |||| |||||   |||||| |||||      
aucuaa   agcuaG UGAG AAGAU   CCAACA Uacga     g
      cuu      A    A     CCU      C     agaaa 


mirna_id: crm-mir-46
hairpin:
-    gaaua      gguaaag           -CG     U      u   uucu 
 aacc     agagga       cugAAGAGAGC   UCUAU GACAGU cgu    a
 ||||     ||||||       |||||||||||   ||||| |||||| |||     
 uugg     uuuccu       gaCUUCUCUCG   AGGUA CUGUca gua    u
u    --aac      ---agua           CUG     -      u   uuca 


mirna_id: crm-lin-4
hairpin:
     cuga     ---   g    -cU   U    C    A       c   - u 
auguu    ugcuu   ucg ccug   CCC GAGA CUCA GUGUGag gca c g
|||||    |||||   ||| ||||   ||| |||| |||| ||||||| ||| |  
uacag    acgag   ggc ggaC   GGG CUCU GGGU CGCAcuu cgu g u
     ----     uuc   a    CAU   U    C    C       -   a u 


mirna_id: crm-mir-247
hairpin:
    ccca     - uu     c       -c  cc     g   -   c  a 
caaa    aucuu c  ccgag agagaau  gc  cuagu acc cac ac g
||||    ||||| |  ||||| |||||||  ||  ||||| ||| ||| ||  
guuu    uggaa g  gguuC UCUCUUA  CG  GAUCA Ugg gug ug u
    cccg     c uu     U       AC  -A     G   a   -  a 


mirna_id: crm-mir-785
hairpin:
g      - ----       - gu     a         uuu          -  agua 
 aaaccg c    ucuuuuu u  ccguc gcgcagaau   uucgcuuaca cg    a
 |||||| |    ||||||| |  ||||| |||||||||   |||||||||| ||    u
 uuuggu g    agaaaaa a  gguaG UGUGUCUUA   AAGUGAAUgu gc    g
-      a uaau       u ug     C         --U          a  aaau 


mirna_id: crm-mir-38
hairpin:
-      ug  ugaaa   - -    a             a     g        ugacacau 
 uccgau  gu     gag c caga ccuauaccgguuu acuuc uggugaua        a
 ||||||  ||     ||| | |||| ||||||||||||| ||||| ||||||||        u
 agguua  cg     cuc g gucu ggaUAUGGUCAAA UGAGG GCCACUau        u
a      gu  -----   a c    a             A     -        uucuuaca 


mirna_id: crm-mir-357
hairpin:
-   a   u     gccuaacag              -u   a    a     gaa   u 
 uca cga gugcu         cggauuccaguaac  cug gcau uacau   guu c
 ||| ||| |||||         ||||||||||||||  ||| |||| |||||   |||  
 agu gcu cacga         gcuUAAGGUCGUUG  GAC CGUA AUgua   caa a
c   -   -     ------aua              CU   -    A     --a   a 


mirna_id: crm-mir-35g
hairpin:
      ----cu    gac    a  -    ug     g   u         -----   ug 
auugca      ugac   ggga cc gugc  auguu acc cggugauag     gac  a
||||||      ||||   |||| || ||||  ||||| ||| |||||||||     |||   
uagcgu      acug   cccu gg CAUG  UACAA UGG GCCACUauc     uug  a
      uauagu    auu    -  U    GU     G   -         gaaca   cc 


mirna_id: crm-mir-35d-2
hairpin:
u   c         auu a      c     g    c   uu   a 
 ggu ggaucggcc   c cugguu ucgcc cggu aua  uca a
 ||| |||||||||   | |||||| ||||| |||| |||  |||  
 cca ccuagccgg   G GACUAA AGUGG GCCA Uau  agu u
g   c         gaC A      A     -    C   -u   a 


mirna_id: crm-mir-59
hairpin:
u   c  ----u   ----    ua                -      ag     -  aac   a 
 guu cc     uga    uuca  gaugacaucguccuga aaacga  cgaaa cu   auc g
 ||| ||     |||    ||||  |||||||||||||||| ||||||  ||||| ||   |||  
 uaa gg     acu    aagu  uuacuGUAGUAGGACU UUUGCU  GCUuu ga   uag a
g   u  uuuuu   uaca    ua                A      AA     a  --a   a 


mirna_id: crm-mir-259
hairpin:
     acgga      A       -U  U    U   U A   aa a 
agccg     acgagu AAUCUCA  CC AAUC GGU G Cac  c c
|||||     |||||| |||||||  || |||| ||| | |||  | a
ucggu     uguuca uuagggu  gg uuag cca c gug  g a
     aaagg      g       uc  u    -   u -   aa g 


mirna_id: crm-mir-790-1
hairpin:
u     -ucaa    c ----u    a   C   G    C  G   A       c      
 ucgaa     gguc c     uuug cug UUG CACU GC AAC CCGCGau uuauc 
 |||||     |||| |     |||| ||| ||| |||| || ||| ||||||| |||| a
 aguuu     ucag g     aagc gac aac gugg cg uug ggcgcua aauag 
a     uucac    a uuugu    g   c   g    c  a   a       -      


mirna_id: crm-mir-788
hairpin:
-    -ugaa   u    c  -  C      CU       G     uuca 
 ggcc     acu acgu UC CG UUCUAA  UCCAUUU CAGag    u
 ||||     ||| |||| || || ||||||  ||||||| |||||     
 cugg     uga ugua ag gc aagauu  agguaaa gucuc    c
c    uagua   u    a  u  c      --       g     uuaa 


mirna_id: crm-mir-253
hairpin:
     -a   u  a     uu    - a   c       -   aacac 
guucg  guu cc cccuu  caca c ccu acuaaca cua     a
|||||  ||| || |||||  |||| | ||| ||||||| |||      
cgagc  uag gg ggGAA  GUGU G GGA UGAUUgu gau     g
     ag   c  c     GG    U C   -       a   aguua 


mirna_id: crm-mir-245
hairpin:
-      cu     u   -           caa  u   u     uuugc 
 aaagua  caaug cga agagcugcuug   gg acc aauug     a
 ||||||  ||||| ||| |||||||||||   || ||| |||||     c
 uuuugu  guuac guu uCUCGAUGAAC   CC UGG UUAac     a
a      uu     -   a           CUC  C   -     ucuuu 


mirna_id: crm-mir-356
hairpin:
    ----   au          -    c    u  c       uca   au 
cgcu    cca  ucgauguggu gagc acgu gg gcaaauc   guc  u
||||    |||  |||||||||| |||| |||| || |||||||   |||   
gcga    ggu  agcuaCACCA CUCG UGCG CU UGUUUag   uag  u
    aaac   --          A    U    -  -       ---   cu 


mirna_id: crm-mir-241
hairpin:
-------caaaaaa   a -   -u  a   A       G       -     -   aaccuc 
              gcg c gug  ca agu GAGGUAG UGCGAGA AAUGa cgg      a
              ||| | |||  || ||| ||||||| ||||||| ||||| |||       
              cgc g cac  gu uca cuucguc acgcucu uuacu gcu      c
uuuuuucaacuaaa   a u   cc  g   a       g       g     u   acuaaa 


mirna_id: crm-mir-35c-3
hairpin:
-     c           -  A        A   U        uu  ua 
 ucggu ggaucggaccu cC CUGGUUUU GCU CGGUGaua  uc  g
 ||||| ||||||||||| || |||||||| ||| ||||||||  ||   
 agcua ccuagccugga GG GACUAAAA UGG GCCACUau  ag  a
u     c           C  -        G   -        -u  ua 


mirna_id: crm-mir-58b
hairpin:
-    -ugau    gccaua         C    AUU  C        a   ccucc 
 cguu     gcuc      uccauUGCC UACU   CG AUCUCAUC cuu     a
 ||||     ||||      ||||||||| ||||   || |||||||| |||     g
 gcaa     cgag      aggUAACGG AUGA   GC UAGAGUag gaa     u
a    uauau    ----aa         C    CUU  -        -   uauaa 


mirna_id: crm-mir-239a
hairpin:
-      a  uu               CAC      A     c  uga 
 aaucca ga  gcgauuUUUGUACUA   AUAGGU CUGGa ac   g
 |||||| ||  |||||||||||||||   |||||| ||||| ||    
 uuaggu cu  cguuaaaaaCGUGAU   UAUCUA GACcu ug   a
c      -  --               -CU      A     a  uuu 


mirna_id: crm-mir-71
hairpin:
   --     -   --caccaaa   uc  a  a         U         G   u   a 
cgu  gucug uac         cac  ga cg UGAAAGACA GGGUAGUGA ACG cgg g
|||  ||||| |||         |||  || || ||||||||| ||||||||| ||| |||  
gca  uagac gug         gug  cu gC GCUUUUUGU CUUAUCACU Ugc gcu c
   uu     u   uaccauaua   uu  g  C         -         A   u   c 


mirna_id: crm-mir-80
hairpin:
-   -ca   --uu   c  A         --     U  a       -c  c 
 gga   cuc    ucg uc GCUUUCGAC  AUGAU CU aacaaua  gu g
 |||   |||    ||| || |||||||||  ||||| || |||||||  ||  
 ccu   gag    agc aG CGAAAGUUG  UACUA GA Uuguugu  ca a
a   aua   uuuu   a  C         AU     -  G       aa  g 


mirna_id: crm-mir-63
hairpin:
uuc u   acaugu     aa  u   c           --    A     U     - auaaa 
   c cca      cagaa  ca cca uUCUAACUCGU  CGGU GUCAU GUUuc c     c
   | |||      |||||  || ||| |||||||||||  |||| ||||| ||||| |      
   g ggu      gucuu  gu ggu aaGAUUGAGCG  GUCA CAGUA caaag g     c
gaa c   ------     -a  -   a           AA    -     U     u aagga 


mirna_id: crm-mir-2227
hairpin:
u      -------------         c         uca   u     c   cacau 
 gcaggc             ggccugaug cgucuuuca   acu ccacu guu     g
 ||||||             ||||||||| |||||||||   ||| ||||| |||      
 cguucg             uuggacuaC GCAGAAAGU   UGA GGUga caa     a
a      aaauucauuuugu         U         -UG   C     -   aaaac 


mirna_id: crm-mir-2228
hairpin:
-     g    uuga     -  -u          u    c   c  c u     -    a 
 gaucg ugag    auucc au  uuugugucua uuuc gag ug g ugacu gaaa g
 ||||| ||||    ||||| ||  |||||||||| |||| ||| || | ||||| ||||  
 uuagu auuu    ugagg ug  aagcaCAGAU AAAG CUC AC C ACUga cuuu a
u     -    -gua     c  uu          U    U   U  - U     g    a 


mirna_id: crm-mir-62
hairpin:
-  c   aguuag           cc      -c     c 
 gg uau      guggguuagau  cauauc  uuccg g
 || |||      |||||||||||  ||||||  ||||| u
 cc aug      CAUUCGAUCUA  GUAUAG  aaggu a
u  -   ----GA           AU      Ua     a 


mirna_id: crm-mir-2229
hairpin:
-     --   a     a   uu    -   gg     c  a  cau 
 guugu  uau uguuc cag  ccca cag  cuuuc ac cu   u
 |||||  ||| ||||| |||  |||| |||  ||||| || ||    
 caaca  aua acaaG GUC  GGGU GUC  GAAAG ug ga   g
a     uu   g     G   CU    A   -A     U  c  aga 


mirna_id: crm-mir-64e
hairpin:
    -  -ccaa    cc     c   U    C   GUA       C   uaauag   a 
acgg ac     agga  ccacc ggc AUGA ACU   ACAUGUC UGG      cag g
|||| ||     ||||  ||||| ||| |||| |||   ||||||| |||      ||| a
uguu ug     uccu  ggugg ucg uacu uga   uguacag acc      guc u
    a  uuaag    cu     -   u    u   -aa       -   ---uaa   u 


mirna_id: crm-mir-2230
hairpin:
    caa  ug   aggaag                 C  U   A   auc  u  a 
cacu   uu  agu      aacuucAGUCUGUGAUA UG GGU GCa   gg ac g
||||   ||  |||      ||||||||||||||||| || ||| |||   || ||  
guga   aa  uca      uugaaGUCAGGCACUGU AC CCA Cgu   uc ug u
    ---  gu   --aaag                 A  -   A   ---  -  a 


mirna_id: crm-mir-2231
hairpin:
-     -----    u       --               AA    A    U   -  aca 
 uugcu     gauu auguuuu  ggagacugAACGGCA  AACU CAGG AGC ag   u
 |||||     |||| |||||||  |||||||||||||||  |||| |||| ||| ||    
 aaugg     uuga uacgaaa  uuuuugaCUUGCCGU  UUGA GUCC Ucg uc   a
g     aaagc    u       gu               AC    -    C   a  auu 


mirna_id: crm-mir-64a
hairpin:
c       -       aa   GA     UU      -  U  -   augag     a 
 agaaggc cucgccg  UAU  CACUG  GCGUAG CA Ga cca     acucu c
 ||||||| |||||||  |||  |||||  |||||| || || |||     ||||| a
 ucuuccg gagcggc  AUA  GUGAC  CGCAUC GU cu ggu     ugaga a
-       u       CC   AG     -U      A  -  a   --aag     a 


mirna_id: crm-mir-66
hairpin:
   - -    -gaaaa     caa       CA      A A       A     - -    aa 
ucc c accg      gaaca   agccaug  UGACAC G UUAAAGG UGUGa c acuu  c
||| | ||||      |||||   |||||||  |||||| | ||||||| ||||| | ||||   
agg g uggc      cuugu   ucgguaC  ACUGUG C GAUUUCC ACAcu g ugaa  a
   a a    augagg     ---       AG      C -       -     a a    ca 


mirna_id: crm-mir-64b
hairpin:
-     -         C        C  G     C     --   acu 
 ggggc cucgccgau AUGACACU AA CAUAC AUGGa  cug   u
 ||||| ||||||||| |||||||| || ||||| |||||  |||    
 ccccg gagcggcUA UAUUGUGA UU GUAUG UACcu  gac   u
c     u         C        -  G     -     aa   gac 


mirna_id: ppc-mir-1
hairpin:
-     acu    auuc      c              gcc     cuugc    a 
 cucuc   ccuc    accguu cguacuucuuugca   ccaua     ccgc u
 |||||   ||||    |||||| ||||||||||||||   |||||     |||| g
 gagag   ggag    ugguaa GUAUGAAGAAAUGU   GGUau     ggug a
c     --c    ---c      U              -AA     ----u    a 


mirna_id: ppc-mir-45
hairpin:
-      ca      cu          ga   u       -  --c c  a 
 gagucg  gccccg  cuggaugugu  ucu ggucgua uc   g gc a
 ||||||  ||||||  ||||||||||  ||| ||||||| ||   | ||  
 cucggc  cggggu  GACUUACACA  AGA UCAGUau ag   c cg a
u      --      UC          -G   -       u  uaa u  u 


mirna_id: ppc-mir-42a
hairpin:
-     uucag   a               cu   u    cu    -ugu   augc 
 gugca     ugc gcccgcagugggugu  gcc cggu  gaag    gag    a
 |||||     ||| |||||||||||||||  ||| ||||  ||||    |||     
 cacgu     acg cgggCGUUACCUACA  UGG GCCA  CUuc    cuc    u
c     -----   -               AG   -    --    uugc   cuag 


mirna_id: ppc-mir-63g
hairpin:
-  -   ucucc     uc   u   -      c     c  -   cau 
 gc ccg     uuuuc  cgu cgc cuguua gucau gu ccu   u
 || |||     |||||  ||| ||| |||||| ||||| || |||   c
 cg ggc     aaaaG  GCA GCG GACAAU CAGUA ca gga   g
u  a   -uucu     GA   C   A      -     U  u   uag 


mirna_id: ppc-mir-2232-1
hairpin:
c  a       auc  au    a       -   -    g      -  aua u 
 ug gagaccc   cg  ccug acgguuc ccu ggug cauggu cg   c a
 || |||||||   ||  |||| ||||||| ||| |||| |||||| ||   |  
 ac cuuuggg   gc  ggaC UGUCAAG GGG CCAC GUAUca gc   g a
a  -       ---  --    C       C   U    A      a  -ga u 


mirna_id: ppc-mir-87
hairpin:
-    u     cau      -        -   gua    a   -  -   a 
 gggg gacgu   gcucgu cgccugaa cuu   cuca ccu cg uca u
 |||| |||||   |||||| |||||||| |||   |||| ||| || ||| a
 cccc cugcg   cgagCG GUGGACUU GAA   GAGU Gga gc agu g
u    -     -au      U        U   -AC    -   c  g   a 


mirna_id: ppc-mir-124
hairpin:
-  a    -     a   a   c  u       -   a       --g       
 ga gggu cguua uuc cuu gc uucaccg gug cuuuagu   cuuugu 
 || |||| ||||| ||| ||| || ||||||| ||| |||||||   ||||| c
 cu ccua gcaau aag gaa CG AAGUGGC CAC GGAAUca   gagaca 
a  a    a     -   a   C  U       G   -       aga       


mirna_id: ppc-mir-239-1
hairpin:
a    aa    ca     u    u U      UA     -        -  auau 
 ucau  cgca  uuaca gccu g UUGUAC  GGCUA AGGAAUUa cg    a
 ||||  ||||  ||||| |||| | ||||||  ||||| |||||||| ||    u
 agua  gcgu  ggugu cgga c agcgug  cugau uccuuaau gc    u
-    --    -a     -    c u      uc     g        a  gaag 


mirna_id: ppc-mir-37
hairpin:
-     gucc       c  c    a     a  a     -  gag 
 ucuga    cuucgau gc ucug ucacu cg ugaaa cu   a
 |||||    ||||||| || |||| ||||| || ||||| ||   u
 aggcu    gaaguUG CG AGAC AGUGG GC ACUuu ga   a
a     -aua       U  A    A     -  C     u  gca 


mirna_id: ppc-lin-4
hairpin:
c    c  -    ugcu    aa      U  C     C     -       ga   a 
 caca ca cgac    agca  uggcgu CC UGAGA CUCAA UUGUGau  gau c
 |||| || ||||    ||||  |||||| || ||||| ||||| |||||||  |||  
 gugu gu gcug    ucgu  aucgca gg acucu gaguu ggcacug  cug g
-    u  a    ---u    --      c  u     c     u       -a   a 


mirna_id: ppc-mir-252
hairpin:
-     ccuauc     g  c    uC       U  U  CGC      -  aaca 
 gauca      acucu uc gggu  UAAGUAG AG GC   AGGUaa cc    a
 |||||      ||||| || ||||  ||||||| || ||   |||||| ||    u
 cuagu      ugaga ag ucca  auucguc uc cg   uccauu gg    u
u     ------     -  u    ca       u  -  aua      u  agag 


mirna_id: ppc-mir-63b
hairpin:
     aucc      -uc c    a       c      a    u     u    -  guu 
gaacu    gaucca   g ucac ugggaac cucucg cuuu guguc uaga cu   u
|||||    ||||||   | |||| ||||||| |||||| |||| ||||| |||| ||   c
cuuga    cugggu   c agug acccuUG GAGAGC GAAG CACAG AUcu ga   g
     ----      uuu a    -       U      -    U     U    u  aaa 


mirna_id: ppc-mir-63c-1
hairpin:
       -a      g           -      -    u       c  gau 
gaaucau  guccau ugggguuccau ucgcau gagu ucaugga uc   u
|||||||  |||||| ||||||||||| |||||| |||| ||||||| ||    
cuuggua  cgggug gcuccaGGGUA AGCGUA CUCA AGUAUcu ag   c
       ac      -           G      A    C       -  aua 


mirna_id: ppc-mir-63c-2
hairpin:
      c       -aa     g           -      -    u       c  gau 
gguacc gaaccau   uccau cgggguuccau ucgcau gagu ucaugga uc   u
|||||| |||||||   ||||| ||||||||||| |||||| |||| ||||||| ||    
ccaugg cuuggua   aggug gcuccaGGGUA AGCGUA CUCA AGUAUcu ag   c
      -       acc     -           G      A    C       -  aua 


mirna_id: ppc-mir-63c-3
hairpin:
      c a    -uaa     g           -      -    u       c  gau 
gguacc g acca    uccau ugggguuccau ucgcau gagu ucaugga uc   u
|||||| | ||||    ||||| ||||||||||| |||||| |||| ||||||| ||    
ccaugg c uggu    aggug gcuccaGGGUA AGCGUA CUCA AGUAUcu ag   c
      - a    uacc     -           G      A    C       -  aua 


mirna_id: ppc-mir-63c-4
hairpin:
      c       -aa     g           -      -    u       c  gau 
gguacc gaaccau   uccau ugggguuccau ucgcau gagu ucaugga uc   u
|||||| |||||||   ||||| ||||||||||| |||||| |||| ||||||| ||    
ccaugg cuuggua   aggug gcuccaGGGUA AGCGUA CUCA AGUAUcu ag   c
      -       acc     -           G      A    C       -  aua 


mirna_id: ppc-mir-79
hairpin:
c   g     a  u   c        u    u     c   -  aaau 
 gga aauca cu cuu gcuuuggu aucu gcuuu uga cu    g
 ||| ||||| || ||| |||||||| |||| ||||| ||| ||     
 cuu uuagu gg gaa CGAAACCA UGGA CGAAA Acu gg    u
c   g     -  c   U        U    U     U   u  aacc 


mirna_id: ppc-mir-84b
hairpin:
   -c     a   auac     u        UU       U    ----ug  u 
ucc  uucca ucg    cacag UGAGGUAG  AAGAAUA GUGa      cc u
|||  ||||| |||    ||||| ||||||||  ||||||| ||||      || u
agg  aaggu agc    guguc acuccguc  uucuuau cacu      gg c
   cu     -   ---a     c        -c       u    uacuaa  g 


mirna_id: ppc-mir-42b
hairpin:
c      cc u    uu   a      -c    c      ugu  a 
 ucugag  g gccu  guc cagaau  ccug gugacc   ga u
 ||||||  | ||||  ||| ||||||  |||| ||||||   || u
 aggcuc  c cgga  CAG GUCUUA  GGGC CACUgg   cu g
-      uc u    UC   C      UU    -      -uu  a 


mirna_id: ppc-mir-239-2
hairpin:
   -a   cuuacu   g   -    u U      UA     -        -   cau 
gga  gca      cau cau gccu g UUGUAC  GGCUA AGGAAUUa cgu   a
|||  |||      ||| ||| |||| | ||||||  ||||| |||||||| |||   u
ccu  cgu      gua gua cgga c aacgug  cugau uccuuaau gcg   u
   ag   cguaac   a   u    c u      cc     c        u   aag 


mirna_id: ppc-mir-46
hairpin:
    -cc  c     gca   a  -         --    ugu       -  --g   - g 
accc   gg accac   gag cc gaagagagc  cuuc   ugacagu gc   ggc c u
||||   || |||||   ||| || |||||||||  ||||   ||||||| ||   ||| |  
uggg   cc uggug   uuc gg CUUCUCUCG  GAGG   ACUGUua cg   ucg g u
    acu  -     ---   -  a         CU    --U       u  uaa   u g 


mirna_id: ppc-mir-81
hairpin:
     cc     u cg        gu      g    - uaau 
ucacu  cggca g  guuuucac  ugaucu agag c    c
|||||  ||||| |  ||||||||  |||||| |||| |     
aguga  gccgu C  CGAAAGUG  ACUAGA Ucuu g    g
     -a     U AU        AU      G    u uaua 


mirna_id: ppc-let-7
hairpin:
-     c a  ---u    cU   G   -              cggaauaa      c    
 gcgac g gc    ccug  GAG UAG UAGGUUGUAUAGUU        uaccaa ugu 
 ||||| | ||    ||||  ||| ||| ||||||||||||||        |||||| || a
 cguug c cg    ggac  uuc auc guccaacaugucaa        gugguu acu 
g     a c  cuac    cg   g   u              -------a      a    


mirna_id: ppc-mir-63a
hairpin:
u       c   -aa   -      a     c  u     g   ug  u     -ug   acu 
 cucuccc ucu   ucc ccccuu gccgu cc ucucg cuu  gu gucau   ucu   u
 ||||||| |||   ||| |||||| ||||| || ||||| |||  || |||||   |||    
 gggaggg aga   agg ggggag cggca GG AGAGC GAA  CA CAGUA   aga   g
-       -   agg   a      -     U  U     -   GU  -     Uca   gaa 


mirna_id: ppc-mir-71
hairpin:
-     gucgacg     cg     a        A    UU        G    ugaaau 
 gucgu       accga  agcga ggUGAAAG CCUG  GGUAGUGA ACGa      u
 |||||       |||||  ||||| |||||||| ||||  |||||||| ||||      u
 cggua       uggcu  ucguu ccgcuuuc ggac  ccaucacu ugcu      a
c     ----aca     --     c        -    --        a    uuccua 


mirna_id: ppc-mir-63d
hairpin:
c     uggc    cuuuuuu     c         uu  c        -  ucau 
 cuccc    ccgu       uuucu cguucgcuu  gg gucauggu cc    u
 |||||    ||||       ||||| |||||||||  || |||||||| ||    u
 gaggg    ggca       agaGA GCGAGCGAA  UC CAGUAUca gg    g
-     ---u    -------     A         -C  A        u  ucgg 


mirna_id: ppc-mir-2232-2
hairpin:
-   c        g -c     g   -   ag   c     au   c c   u  -   a  u 
 guu gccuaauc u  gccca cuc ggg  cgg ucgcc  ggu g cau ga ccg uu g
 ||| |||||||| |  ||||| ||| |||  ||| |||||  ||| | ||| || ||| ||  
 cga cggguugg a  cgggu gag ccC  GUC AGCGG  CCA C GUA cu ggc ag a
c   -        g ac     -   u   CU   A     GU   - A   U  a   -  u 


mirna_id: ppc-mir-72
hairpin:
-      ---     c uau   a   A   A G    U    U   U  -ug  cga 
 gcaauu   ggucg g   ccg gug GGC A AUGU GGCA AGC Ga   gu   a
 ||||||   ||||| |   ||| ||| ||| | |||| |||| ||| ||   ||   u
 cguuga   ccagc c   ggc cgc ccg u uaca ccgu ucg cu   cg   u
u      cgc     - ---   a   a   a g    -    c   c  uaa  aag 


mirna_id: ppc-mir-86
hairpin:
    g    gc ---au      -        UUUC     A       agccu 
ccuu aucg  c     gccggc UAAGUGAA    UUGCC CAGUCuu     a
|||| ||||  |     |||||| ||||||||    ||||| |||||||      
ggga uggc  g     cggccg guucgcuu    aacgg gucggaa     a
    g    aa aagau      c        ucau     -       cacuu 


mirna_id: ppc-mir-242
hairpin:
       uagucagc       guc      U       GC U     U -     -au   ug 
aaaaggu        ugggacg   cguggu UGCGUAG  C UCGAU G GCGau   uuc  c
|||||||        |||||||   |||||| |||||||  | ||||| | |||||   |||  a
uuuucca        accuugc   guaccg acgcguc  g agcua c cgcua   aag  c
       -------u       -aa      u       ua c     - g     cgu   ua 


mirna_id: ppc-mir-63f
hairpin:
c     ---cu    ccu            -    -g   u       -  uuc 
 agagc     ucca   gggguuccauuc guau  agu ucaugga cu   c
 |||||     ||||   |||||||||||| ||||  ||| ||||||| ||    
 ucuug     aggu   ccccaaGGUGAG CGUG  UCA AGUAUcu ga   c
-     auaau    -au            G    AG   C       c  cau 


mirna_id: ppc-mir-65
hairpin:
-   g  cg u      uU         A   CU        -  g aua 
 uca uc  c gcccuu  AUGACACUG CCC  CAAUGCGG au u   a
 ||| ||  | ||||||  ||||||||| |||  |||||||| || |    
 agu ag  g cgggaa  uacugugac ggg  guuacgcc ua a   c
g   a  -a u      cc         -   -u        a  g ggu 


mirna_id: ppc-mir-84a
hairpin:
-    ccucu   u   gu    cccu    U       UUA      A    ug  cau 
 uacu     ccu ccc  cgau    cagu GAGGUAG   AGAAUA GUGa  ac   c
 ||||     ||| |||  ||||    |||| |||||||   |||||| ||||  ||    
 auga     gga ggg  gcug    guca cuccguc   ucuuau cacu  ug   a
c    caucu   -   ug    ---u    c       -cc      g    ua  aag 


mirna_id: ppc-mir-2252
hairpin:
g    -------g       -   u      uuu        ac 
 aggg        uggcacu cgg cuagaa   gacagauu  c
 ||||        ||||||| ||| ||||||   ||||||||   
 uccu        ACUGUGA GCC GAUCUU   CUgucuaa  g
a    aauaaaaG       A   C      --C        ac 


mirna_id: ppc-mir-2253b
hairpin:
      --------   ----a     ugacugaaca             a   -        ccua 
gaugua        acu     gcagu          uuucggacuuuca cag gccauaca    a
||||||        |||     |||||          ||||||||||||| ||| ||||||||     
uugcau        uga     cgucg          aaaGCCUGGAAGU GUC CGGUAUgu    u
      aaaaaaaa   gaaaa     ----------             C   A        auug 


mirna_id: ppc-mir-2258
hairpin:
u   ucu   ----au     uc       c         --       u  c  u  a 
 cuc   cug      cucaa  gggaguu cgguuucgu  ugguguc au uc ac g
 |||   |||      |||||  ||||||| |||||||||  ||||||| || || || a
 gag   gau      gaguu  cccuuaa GCCAAAGCG  ACCACAG UA ag ug a
-   -uu   guagau     -c       C         AA       -  A  u  g 


