# mirna_hairpin

mirna_id: bra-MIR2111b
hairpin:
     a   cu         C         U       u     g  aauuaaa    g 
gguga gaa  ggUAAUCUG AUCCUGAGG UUAaaaa uuaua gc       acau c
||||| |||  ||||||||| ||||||||| ||||||| ||||| ||       ||||  
ucauu cuu  CCAUUAGGC UAGGGCUCC Aauuuuu gguau ug       ugua a
     c   cu         A         U       u     g  -------    a 


mirna_id: gga-mir-2188
hairpin:
              cu ug       ----   c  -       u   -a         A     CA   U  C       guauag 
gagguuagauggca  u  ggguuuc    cuu ug aggaaua cag  ccuguggga AGGUC  ACC CA AUGUCCU      a
||||||||||||||  |  |||||||    ||| || ||||||| |||  ||||||||| |||||  ||| || |||||||       
uucuagucuaccgu  a  uccagag    gaa ac uucuuau guc  ggacacccu uccag  ugg gu uauaggg      a
              ac gu       acgu   c  a       -   cc         a     ac   u  a       aggaau 


mirna_id: gga-mir-3523
hairpin:
  -c      aa    gccga      gg ccau  u   ccu c   u   u   c g   ug            -  g  u   g 
gc  gagccg  cgga     gcggcg  g    gg gaa   g ggg gug gcg u gag  cgaggcgcugcg gg gc gcu c
||  ||||||  ||||     ||||||  |    || |||   | ||| ||| ||| | |||  |||||||||||| || || ||| a
cg  cucggc  gccu     cgccgc  c    cc cuu   c ucc cgc cgu A CUC  GCUCCGUGACGC CC cg cga g
  uc      --    acacg      aa --uu  u   --- u   u   -   c G   CU            G  g  -   g 


mirna_id: gga-mir-3524a
hairpin:
 ug   -u    uuaag   c  ac  a  -   a       a       c    ucua 
c  gau  aucu     guc cu  ca cc cgg ccauucu ugauucu ugau    a
|  |||  ||||     ||| ||  || || ||| ||||||| ||||||| ||||     
g  cua  uagg     cag ga  gu GG GUC GGUAAGA GCUAAGA acua    a
 gu   cc    -ucua   a  aa  c  A   -       C       C    uuga 


mirna_id: gga-mir-3526
hairpin:
   cu             -cc   ----   u    auauuu    agu      uu u 
gau  cgacuuuauuuuu   ucu    uug aguu      uugg   agcugu  g c
|||  |||||||||||||   |||    ||| ||||      ||||   ||||||  |  
cUG  GUUGAAGUAGAAG   aga    gac ucaa      aacc   ucgacg  c u
   UG             UUa   cugu   c    cgaaau    cuu      cu u 


mirna_id: gga-mir-3527
hairpin:
   ga  ggg ga       gg   ua  au       -  ga       uag  g 
cuc  au   g  uucuaug  gau  ca  gcgaugg uc  cuucuag   gc g
|||  ||   |  |||||||  |||  ||  ||||||| ||  |||||||   ||  
gag  ua   c  aggaugu  uug  gu  UGUUGUC GG  GGGGAUC   ug a
   ag  -aa ug       -a   gg  --       U  AG       Cgg  a 


mirna_id: gga-mir-3528
hairpin:
   -uu      ----g   ---A    -  AGUC   U            ug 
gca   acacag     ucC    UGCC CC    GUG UGCAGAuauggc  u
|||   ||||||     |||    |||| ||    ||| ||||||||||||   
cgu   uguguc     agg    acgg gg    uac guguuuguaccg  a
   uuc      ggaaa   aaag    u  --au   u            ug 


mirna_id: gga-mir-3529
hairpin:
       -c     aA  C     -    -C       --g    ga 
ggccgug  gcccu  GG AGACU GUGA  UUGUUGU   gugg  u
|||||||  |||||  || ||||| ||||  |||||||   ||||   
ccggcgc  cggga  cc ucuga cacu  aacaaca   uacc  g
       ca     ga  u     u    aa       aca    ga 


mirna_id: gga-mir-3530
hairpin:
  a     --au       -   u               g ggcc 
ga ggcug    gcgcccg cuc gcucgcaccauugug c    g
|| |||||    ||||||| ||| ||||||||||||||| |    a
cu ccggc    cgcgGGU GGG CGAGUGUGGUAACac g    a
  c     cggu       A   U               - aaac 


mirna_id: gga-mir-2964
hairpin:
          aca   -        a         guu   ac g 
aaucucugcu   gau guccagac caauucuug   cgu  g c
||||||||||   ||| |||||||| |||||||||   |||  |  
uuagagacga   cuA CAGGUUUG GUUAAGAAC   gcg  c u
          gga   A        C         -AC   -a c 


mirna_id: gga-mir-3531
hairpin:
u            --c     U     G       U   gu uc 
 ugcagaucaaag   cUCCU GUUUG GUUGUAA GAa  g  g
 ||||||||||||   ||||| ||||| ||||||| |||  |   
 acgucuaguuuc   gagga caaac caacguu cuu  u  a
a            aca     -     a       c   ug ca 


mirna_id: gga-mir-3525
hairpin:
      u       CA         C      G    aacu 
gucucu ucagccu  GCCAUUCUG GAUUCU UGAu    u
|||||| |||||||  ||||||||| |||||| ||||     
caggga gguuggg  ugguaagau cuaaga acua    u
      u       cc         a      g    agau 


mirna_id: gga-mir-3532
hairpin:
u      cu   gu  -          gc  uu   c   au 
 gugcuu  cac  ug cacugcagcu  uc  ggg uua  u
 ||||||  |||  || ||||||||||  ||  ||| |||  a
 cacgaa  gUG  AC GUGACGUCGG  GG  ccc agu  a
a      au   GU  U          -A  UU   -   cu 


mirna_id: gga-mir-3533
hairpin:
      g  -    --gu          aa  uac     acu 
gguaug ag uccu    gguauccaug  ac   cuuca   c
|||||| || ||||    ||||||||||  ||   |||||   c
ccguau uc agga    cUAUAGGUGU  UG   GAAGU   a
      g  u    augc          AG  --U     Acu 


mirna_id: gga-mir-3534
hairpin:
u   acu             U GA   U   - A  U  c 
 ggg   gggggggUGUGGG U  CAG GCU G GG cu c
 |||   ||||||||||||| |  ||| ||| | || || c
 ccc   ccccucuacaccc g  guc cga c cc ga c
a   ccc             c uc   u   g c  c  a 


mirna_id: gga-mir-3535
hairpin:
u       AUGAUG   -         AAAu   gau   a 
 gcuGGAU      ACU GAUUAUCUG    gcu   gaa c
 |||||||      ||| |||||||||    |||   ||| c
 cgaccua      uga cugauagau    uga   cuu a
a       --gucg   a         cucc   aau   c 


mirna_id: gga-mir-3536
hairpin:
   a    ---       -A  AGA      C     - u 
gcu ugCU   GCAUACG  GU   CCCUUU ugacu c g
||| ||||   |||||||  ||   |||||| ||||| | c
cga acga   cguaugu  ca   gggaaa gcuga g c
   a    caa       aa  ggg      u     u u 


mirna_id: gga-mir-3537
hairpin:
  u      U     --CU     AU     -U       c 
gg ggaggG GAGUG    GUAGG  GGGGC  Cccggcc u
|| |||||| |||||    |||||  |||||  |||||||  
cc ccuucc cucac    cgucc  ccucg  gggucgg a
  -      -     uccc     --     uc       c 


mirna_id: gga-mir-3538
hairpin:
     UC  U     -AA -      --a  a      g 
gcaGU  GG GAUGA   C CAUGGA   ua gcgcug g
|||||  || |||||   | ||||||   || ||||||  
cgucg  cc uugcu   g gugccu   gu cgcgac c
     ua  -     gag a      aca  c      a 


mirna_id: gga-mir-3539
hairpin:
      gC      A   -   U  U     uu  u 
cuccuu  AGAGGA GAC UGA GC AGUUa  ug u
||||||  |||||| ||| ||| || |||||  || u
gagggg  ucuccu cug acu cg ucagu  ac c
      -a      c   u   c  -     -c  c 


mirna_id: gga-mir-3540
hairpin:
aggaaAU      A   CA     -     gcg 
       GGUGGA GAA  AGGCC UGCcc   a
       |||||| |||  ||||| |||||   g
       ccaccu cuu  uccgg acggg   g
------u      c   cg     g     aau 


mirna_id: rno-mir-3541
hairpin:
-   cag    -      ---          u u a        c uaucc   gca 
 gcu   gacu gcccag   ugugcagugg g g ggaggggg g     uag   u
 |||   |||| ||||||   |||||||||| | | |||||||| |     |||    
 cga   cugg cggguu   acACGUCACU C C CCUCCCUc c     auc   c
c   -ca    u      gag          C - -        u ----c   aca 


mirna_id: rno-mir-3542
hairpin:
c    agaaa   -aga   aug          u     a    ag    ---a      agg 
 cuga     ucg    acu   guagggagag ggggc uugg  cugc    cagagg   g
 ||||     |||    |||   |||||||||| ||||| ||||  ||||    ||||||   u
 ggcu     agc    uGA   CGUUCCUUUC UCUCG AAcc  gaug    gucucc   c
-    ----a   cacg   ---          U     G    aa    gugg      gga 


mirna_id: rno-mir-3543
hairpin:
u    caaa     -------A     G   ----     CA      g        -a     u 
 gauu    cCAGG        GUCGA UGA    UGGUU  AAccac aguuugac  auggu c
 ||||    |||||        ||||| |||    |||||  |||||| ||||||||  |||||  
 cuga    ggucc        cagcu acu    accaa  uuggug ucgagcug  uacca a
a    ----     aaacuuug     a   gaga     ac      -        ag     a 


mirna_id: rno-mir-3544
hairpin:
c     aa       aa   a   a    a      c   a  gc 
 gguug  gggggug  gaa ggc ucau uaggag uga ug  u
 |||||  |||||||  ||| ||| |||| |||||| ||| ||   
 ucaac  cccccaC  CUU CCG AGUA GUCCUC Acu ac  g
-     --       -C   G   C    C      A   a  gu 


mirna_id: rno-mir-203b
hairpin:
   g  gcc c   c u       g           C  A    U    -  a  g gc 
gcu uc   g ugc g gcgcgcc ggucuAGUGGU CU AACA UUCA Ca uu c  u
||| ||   | ||| | ||||||| ||||||||||| || |||| |||| || || |   
cga ag   c acg c cgcgcgg ccaGGUCACCA GA UUGU AAGU gu aa g  a
   -  aca -   u -       a           A  A    C    U  c  - ac 


mirna_id: rno-mir-3546
hairpin:
      gagacgaua   -   c    caaca       u     uc      g  a 
ggcuga         gcu ccu ugac     agcuuuu gcucg  uuauac ug g
||||||         ||| ||| ||||     ||||||| |||||  |||||| || a
ccgacu         uga gga acug     UCGAAAA CGGGC  AAUAug ac g
      gggaacgaa   a   a    ccCAC       C     CC      g  u 


mirna_id: rno-mir-3547
hairpin:
   a  u   agg     a         g  c      uguacccau   a     au 
cug cu cca   uggga gaggggugg gc cgggac         gug ggacu  u
||| || |||   ||||| ||||||||| || ||||||         ||| |||||  c
gac gg ggU   ACUCU CUCCCCACC CG GUcuug         cgc ccuga  u
   -  u   -AG     -         A  A      -----uucu   -     gu 


mirna_id: rno-mir-449c
hairpin:
aa  --g        u    cA  C      UU        G     -A  AC 
  gc   ugggugug caga  GG AGUGCA  GCUAGCUG cuguU  GA  U
  ||   |||||||| ||||  || ||||||  |||||||| |||||  ||   
  cg   auucacgu gucu  cc ucacgu  cgaucggu gaCAA  CU  U
--  aag        c    -c  a      --        -     CC  GC 


mirna_id: rno-mir-3085
hairpin:
gu   -ua        a  u     ucugaa      ---  g  ug 
  ccc   cucuggga gg gccau      ggccag   ga uc  a
  |||   |||||||| || |||||      ||||||   || ||  a
  ggg   gggaccCU CC CGGUA      UCGGUC   cu ag  u
-c   uuc        C  C     ---UCG      Uca  g  ua 


mirna_id: rno-mir-3548
hairpin:
    -g  --      ---      ac  u  aa    g     a         a  -g  aa 
cuuc  gc  gagugu   uggguc  cu ug  cauc uuacc gacaguguu ga  uc  g
||||  ||  ||||||   ||||||  || ||  |||| ||||| ||||||||| ||  ||  c
gaag  ug  uucgua   acccgg  ga ac  GUAG AAUGG CUGUCACGA cu  ag  c
    ga  gu      ugg      -a  c  CC    -     C         C  aa  aa 


mirna_id: rno-mir-3549
hairpin:
-   aaug  --   -cc       c   ga     a     ua   c  u   acug 
 gaa    cc  ggu   ugggagc gag  cuggg cuuug  ggc ag uga    a
 |||    ||  |||   ||||||| |||  ||||| |||||  ||| || |||     
 cuu    gg  ccg   gcccucg cuc  gaCCC GAAAC  CCG UC Acu    c
g   --ga  uu   ccu       a   uc     A     GC   U  U   ccca 


mirna_id: rno-mir-3550
hairpin:
-       a  -----g     u -        uuugagcagu  gg   a   --    -    u 
 cuucugg gu      ccugg g aggggugg          gu  ggc ugg  ggug gccc c
 ||||||| ||      ||||| | ||||||||          ||  ||| |||  |||| |||| a
 gaagacc ca      gGAUC C UCCCUACC          CG  CCg acc  ccac cggg c
a       -  acuuaa     C G        ----------  AG   a   aa    a    u 


mirna_id: rno-mir-3551
hairpin:
       ag    gUC            UU   GA    ag 
uaugggc  uacu   UUCACCAUGGUG  UUU  CAUa  u
|||||||  ||||   ||||||||||||  |||  ||||   
auacucg  augA   GGGUGGUACCAC  AAA  GUau  a
       ga    AAU            UU   --    cg 


mirna_id: rno-mir-344b-2
hairpin:
-   u     A    GC         U        u 
 uga cAGUC GGCU  UGGUUAUAU Ccaggacu c
 ||| ||||| ||||  ||||||||| |||||||| u
 auU GUCAG CCGA  ACCAAUAUG Gguccugg c
a   -     C    -A         -        u 


mirna_id: rno-mir-3552
hairpin:
-    -      ----gc     caA   UG -AGG      U    ----   cag 
 ugug aaucca      ugguu   GGC  C    CCCACU CCCU    ugg   a
 |||| ||||||      |||||   |||  |    |||||| ||||    |||   u
 acau uuaggu      accaa   ccg  g    ggguga ggga    acc   u
u    a      aaaacu     auc   gu aaag      -    cuuu   uuu 


mirna_id: rno-mir-3553
hairpin:
    ---uc  u   -  cu    u      c  uc    --        acc   a 
cgga     ug cuc ug  cugu uauggc cu  ggua  auucacug   gag c
||||     || ||| ||  |||| |||||| ||  ||||  ||||||||   |||  
gucu     ac gag ac  gaca AUACCG GA  CCAU  UAAGUGAC   cuu u
    cucac  u   g  ag    c      U  --    CU        --a   g 


mirna_id: rno-mir-3074
hairpin:
  uuu       --------a       -a    u  u        a    -gc    gugug 
gc   uugcuca         gggcucg  cucc gu ccugcuga cuga   cagu     a
||   |||||||         |||||||  |||| || |||||||| ||||   ||||     a
cg   gacgggu         ccugggc  gagG CA GGAUGACU GACU   Guca     a
  --u       cgacacuaa       gg    C  C        C    AUA    agagu 


mirna_id: rno-mir-31b
hairpin:
u  ccaa   g   -----uca   a   a  au     u             ag   cuc 
 gg    gcu cug        gac gga ag  ggcaa auguuggcauagc  guu   a
 ||    ||| |||        ||| ||| ||  ||||| |||||||||||||  |||    
 cc    cga gac        uug ccu uc  CCGUU UACGACCGUAUCg  caa   g
a  auaa   g   uuugaacc   a   c  cU     C             -a   cuu 


mirna_id: rno-mir-191b
hairpin:
c     g  g   ---a   a   g   a  G    A     -AAGU       gaa  -  c 
 agggc cu cuc    ggc gga agc gg AACG AAUCC     GCAGCUg   ug cu u
 ||||| || |||    ||| ||| ||| || |||| |||||     |||||||   || ||  
 ucucg ga gag    ccg ccu ucg cc uugc uuagg     cgucgac   ac ga g
-     g  g   guua   a   g   c  g    c     guuuu       --a  a  g 


mirna_id: rno-mir-3556b
hairpin:
      g u    cccc     --caua         AAA     -C    caaa 
gcuggu c uuuc    uacau      ACCGAUUUC   UGGUG  UAga    a
|||||| | ||||    |||||      |||||||||   |||||  ||||    a
ugacca g agag    augug      uggcuaaag   accac  gucu    c
      g u    ---a     uccgac         agg     aa    caga 


mirna_id: rno-mir-3557
hairpin:
-   g   aa      ---u         C            A    --A   c    u 
 agc ggg  ggugac    ccacucagG CUUCUGACUCCA GUCC   GUg uauu c
 ||| |||  ||||||    ||||||||| |||||||||||| ||||   ||| ||||  
 ucg ucc  ccacug    ggugggucc GAGGACUGAGGU CAGG   CAc augg g
g   g   -c      ucuc         c            C    ACA   a    a 


mirna_id: rno-mir-3556a
hairpin:
-     gu      -----    aaucauuaua  C      AGA     -C    aaau  u 
 gcaug  gcuuuu     cccc          ac GAUUUC   UGGUG  UAga    uc a
 |||||  ||||||     ||||          || ||||||   |||||  ||||    ||  
 cgugu  uggaga     gggg          ug cuaaag   accac  gucu    ag u
a     ac      acacu    aaucuccuac  a      aaa     aa    ---c  u 


mirna_id: rno-mir-291b
hairpin:
--c ga   ugga   u   a       u cau         g  - c cu    gg 
   g  ucu    agu gga cacaggg c   caaagugga gc c u  ccgu  c
   |  |||    ||| ||| ||||||| |   ||||||||| || | |  ||||   
   c  agg    ucg ccu gugucuc G   GUUUUACCU CG G A  ggcg  u
cca uc   ----   c   -       U AUU         A  U A Ag    gu 


mirna_id: rno-mir-3596d
hairpin:
a   -c      -a   caa              aucuccuaaaca     aa 
 cuc  ucaggg  agg   uagauuguauaguu            gggua  a
 |||  ||||||  |||   ||||||||||||||            |||||  u
 gag  agucuc  UCC   AUCUAACAUAUCaa            cccau  c
-   au      AC   AUC              ---------cac     ca 


mirna_id: rno-mir-466d
hairpin:
-    cauaugacuauA             UCU            aa 
 ugug            UGUGUGUGUAUGU   UUUGUguauaug  u
 ||||            |||||||||||||   ||||||||||||   
 acac            acacacacauaca   aaauacauauac  a
c    ucacaagaacaa             --c            au 


mirna_id: rno-mir-3558
hairpin:
g    -    c  ---    c       uC       GU AUC          uucaag 
 cagc ugga cu   ucac cgggcug  CAUAGAA  C   CCACAGUGCC      g
 |||| |||| ||   |||| |||||||  |||||||  |   ||||||||||      a
 gucg accu ga   ggug guccgac  GUAUCUU  G   GGUGUCAcgg      g
-    u    a  cau    a       -U       UG -GA          cuacgg 


mirna_id: rno-mir-3559
hairpin:
cucagaagaaagccuuuuu   u                         --GAuc   g 
                   cuc cugcgUGACAGACUUAGUACUACAU      cau u
                   ||| |||||||||||||||||||||||||      |||  
                   gag gacGUGCUGUCUGAGUCAUGAUGUA      gua u
-agagaaaccuaaaaaaau   u                         aucaaa   a 


mirna_id: rno-mir-3560
hairpin:
   caca   agaccag    ac    cc A       --G   -     -CAU   aua 
ccu    ugc       gcuu  cuuc  C AAUCCUU   CCC GGGUG    Ugc   c
|||    |||       ||||  ||||  | |||||||   ||| |||||    |||   a
gga    acg       cgag  ggag  g uuaggaa   ggg cccac    acg   a
   --ag   ----aga    ca    -a a       aca   a     uuuu   aua 


mirna_id: rno-mir-3561
hairpin:
      ----gaca     aac    gACU     A    A          ----      
agggca        cucag   cuga    GUGUC AUCC GGGUAGAcac    ucaga 
||||||        |||||   ||||    ||||| |||| ||||||||||    |||| a
uccugu        gaguc   GACU    CACAG UGGG CCUAUcugug    agucc 
      auacgacg     caA    ----     A    A          ucag      


mirna_id: rno-mir-3562
hairpin:
     uaua        ----g     auUU       U  C  G  G    ---   acu 
ucugg    ucaggcuu     cugug    GGGGCAG GG UG AU GGAg   ggg   c
|||||    ||||||||     |||||    ||||||| || || || ||||   |||    
agacc    aguccgag     gacac    cccuguc cc ac ug ucuc   ccc   a
     -uag        aucug     ----       c  a  g  a    uau   gac 


mirna_id: rno-mir-299b
hairpin:
   a   ga -g    -g  -   a   --c      C                     ac 
cgg cug  u  gcug  gc ugg uac   aagaag GGUUUACCGUCCCACAUACau  u
||| |||  |  ||||  || ||| |||   |||||| |||||||||||||||||||||  c
guc gac  g  cgac  ug gcc aug   uucuuu cCAAAUGGCAGGGUGUAUgua  a
   -   ag ga    ag  c   -   aac      a                     aa 


mirna_id: rno-mir-9b-3
hairpin:
  a  ca   gu  uu  a   ---a     a    C            U     cg   c 
gc cg  gaa  ug  ag guc    uuucu cuUU GGUUAUCUAGCU UAUga  gcu u
|| ||  |||  ||  || |||    ||||| |||| |||||||||||| |||||  |||  
cg gc  cuu  ac  uc cgg    agaga gaAA CCAAUAGAUCGA AUAcu  cgg g
  -  cg   --  cc  -   gcaa     -    -            C     ca   u 


mirna_id: rno-mir-3564
hairpin:
g     -aa  -     acuauua       ucugua      -aa  -      -ca   aa 
 uucca   ca gcuuc       ucugucu      ucccuc   gc uuuccc   gug  c
 |||||   || |||||       |||||||      ||||||   || ||||||   |||  a
 agggu   gu cgagg       agacaGA      AGGGAG   CG AAAGGG   cac  c
-     ggg  a     -----ag       ------      AAA  U      Ucc   ga 


mirna_id: rno-mir-218b
hairpin:
u    --aa   --u   u  cg   caug        cgg        uuuacucauaccu g 
 guag    agc   gcg ga  uuc    gugcuuga   aaccaugu             c c
 ||||    |||   ||| ||  |||    ||||||||   ||||||||             |  
 cauc    uug   cgc cu  aag    CACGAACU   UUGGUACa             g a
a    acua   cau   u  aa   acAA        AGA        ------------c a 


mirna_id: rno-mir-3065
hairpin:
-  g    g --a    c            A   A   A     g   cacug 
 ga gcug c   gcug ccucuUCAACAA AUC CUG UGCUg agu     u
 || |||| |   |||| |||||||||||| ||| ||| ||||| |||      
 cu cgac g   cggc ggAGGGGUUGUU UAG GAC ACGAC Uca     g
g  g    g guc    a            A   -   C     -   cccac 


mirna_id: rno-mir-9b-1
hairpin:
  g   u -ua       -a  u   -    C            U     agacuc 
gc cag g   ugggguu  uu uua cuUU GGUUAUCUAGCU UAUga      c
|| ||| |   |||||||  || ||| |||| |||||||||||| |||||       
cg guc c   gccccaa  aa aau gaAA CCAAUAGAUCGA AUAcu      a
  -   - ucc       cc  c   a    -            C     caccac 


mirna_id: rno-mir-3566
hairpin:
    g   c    g ---c         aau        aa   c    c   - u 
agcc cug gcgg g    cugcuggga   guaguuca  guu ggca gag c g
|||| ||| |||| |    |||||||||   ||||||||  ||| |||| ||| | c
ucgg gac cguc c    gaugacccu   CAUCAAGU  CAA CCGU Cuc g a
    -   u    g aacu         caC        AA   U    -   u g 


mirna_id: rno-mir-344a-2
hairpin:
    ----  agg        ------          CC         Uc        a 
gcag    cc   guuuuuac      cagUCAGGCU  UGGCUAGAU  cagguacc a
||||    ||   ||||||||      ||||||||||  |||||||||  ||||||||  
cguc    gg   caaaaaug      gucaguccga  accgaucua  guccaugg c
    agaa  aaa        ucgaau          -a         --        u 


mirna_id: rno-mir-126b
hairpin:
-  a  ---c   -  g  gc    u    ca            cac      a   -   a 
 gc cu    ccg gu cu  gcug ugac  cgcauuauuacu   gguacg guu uga g
 || ||    ||| || ||  |||| ||||  ||||||||||||   |||||| ||| |||  
 cg ga    ggc ca ga  cggc acuG  GUGUAAUAAUGA   CCAUgc cga acu u
u  -  ccuc   a  -  aa    c    UC            AAA      g   c   g 


mirna_id: rno-mir-208b
hairpin:
-     --caccuccu    --        g          C   CG        cu 
 acccc          gcuc  cucucagg AAGCUUUUUG UCG  UUAUguuu  c
 |||||          ||||  |||||||| |||||||||| |||  ||||||||  a
 ugggg          ugag  gggagucu uuUGGAAAAC AGC  AAUAuaag  u
a     uccacccacg    uc        g          A   AG        cc 


mirna_id: rno-mir-216b
hairpin:
----ugcac    g        gA            --CAAA      g  ac 
         guug cagacugg  AAUCUCUGCAGG      UGUGAu uc  u
         |||| ||||||||  ||||||||||||      |||||| ||   
         caac gucugacu  UUAGAGAUGUUC      ACacua ag  g
uacgaacua    a        uc            AUUCAC      a  aa 


mirna_id: rno-mir-3568
hairpin:
-   a   --a       ug    U        C U  AG  G    -a  g 
 ugc cca   acaccag  ggcu GUUCUUCC G GC  AA CAGc  ga a
 ||| |||   |||||||  |||| |||||||| | ||  || ||||  ||  
 acg ggu   ugugguu  ccga caagaagg c cg  uu gucg  cu u
g   -   cag       ca    u        u c  gg  g    ga  a 


mirna_id: rno-mir-3569
hairpin:
c    ccuuc  c -     CA             gaa 
 aguc     cu G GAGGA  GCAGACUCAGGUC   a
 ||||     || | |||||  |||||||||||||    
 ucag     ga c cuccu  cgucugaguccag   u
-    auccc  c u     cg             ggc 


mirna_id: rno-mir-3570
hairpin:
-    g  -aa     -------a   a   GGU   A      --    A  -    uuauu 
 agua au   ugguu        gcu uag   ACA UCAACG  GUCG UG GUuu     u
 |||| ||   |||||        ||| |||   ||| ||||||  |||| || ||||     g
 ucgu ug   accga        cga guc   ugu aguugc  cagc ac caaa     a
g    g  gag     guguccaa   a   acu   a      ga    c  u    ccuua 


mirna_id: rno-mir-9b-2
hairpin:
a   cu   cg    ucuu    -     u   -    C            U     agacc 
 gca  ccu  guga    gaag gaguu uua cuUU GGUUAUCUAGCU UAUga     a
 |||  |||  ||||    |||| ||||| ||| |||| |||||||||||| |||||      
 ugu  gga  cacu    cuuc cucaa aau gaAA CCAAUAGAUCGA AUAcu     a
-   -c   -a    --cc    g     c   a    -            C     cacau 


mirna_id: rno-mir-3571
hairpin:
-      g -cauua     c  a a    C         -CAU      ---      
 uuggcg a      ccuac ca a UACA ACUUCUUUA    UCCAUA   gcauu 
 |||||| |      ||||| || | |||| |||||||||    ||||||   |||| c
 agccgu u      ggaug gu u gugu ugaagaaau    ggguau   uguau 
u      g uaucac     a  c c    a         acau      acu      


mirna_id: rno-mir-1949
hairpin:
-   agaa       caa  gcug             gcc     c  gc  a 
 ggg    aagcagc   ua    guuggcauucugg   ugguu au  ca c
 |||    |||||||   ||    |||||||||||||   ||||| ||  ||  
 ccc    uucgUUG   AU    CGACUGUAGGACC   AUcaa ug  gu u
a   ---a       ---  ---A             -AU     u  uu  c 


mirna_id: rno-mir-3572
hairpin:
u     cagu  g    ggcc           --c        -        ua  u 
 gccac    aa ugga    aguuuggggga   agggcaag gugggcag  gc g
 |||||    || ||||    |||||||||||   |||||||| ||||||||  || a
 cggug    uu gcuu    ucgGACCCCUU   UCCCGUUC CAUUuguc  cg c
a     ----  g    gaua           UUU        A        --  a 


mirna_id: rno-mir-1188
hairpin:
-    c     ----U      AG UU     -A   u  aa c 
 gucu ucagc     GGUGUG  G  GGGCC  GGA ga  c c
 |||| |||||     ||||||  |  |||||  ||| ||  |  
 caga agucg     ccACAC  C  CUCGG  Ccu cu  g a
u    -     ucguc      CA CC     AG   -  cg a 


mirna_id: rno-mir-3573
hairpin:
-    uuU A       U A   A       uccuu 
 augg   G GGGGCAG G UAG AAGGAga     u
 ||||   | ||||||| | ||| |||||||     u
 UACC   C CCCCGUC C AUC UUccucu     c
c    -CU -       U A   C       ucuuu 


mirna_id: rno-mir-1193
hairpin:
    ----     -u  uc  a    a    u a          - C      G    - uuc 
ggug    cuuac  gc  uc gggu gcug g ggAUGGUAAA C GGUGAC UGCa c   a
||||    |||||  ||  || |||| |||| | |||||||||| | |||||| |||| |   u
ccau    gggug  ug  ag ccca cgac c CCUAUCAUUU G CCACUG AUgu g   u
    agua     uc  cc  a    -    - g          U C      G    c uau 


mirna_id: rno-mir-3574
hairpin:
-   a     ucg g  gc     ga   aU           A   -     G  g  ccg 
 gcc ggggu   c cu  ccagg  cag  CAGCCGCUGUC CAC GCACA ug gu   g
 ||| |||||   | ||  |||||  |||  ||||||||||| ||| ||||| || ||    
 ugg ccccg   g ga  ggucc  guc  gucggugacgg gug cgugu ac ca   a
g   -     uca g  --     ga   cu           -   u     g  g  acg 


mirna_id: rno-mir-3575
hairpin:
uggacgccgaugacacag   c       uc a  a            auuagagacuccc 
                  ggg aggggcc  c uc uuacccggcagu             a
                  ||| |||||||  | || ||||||||||||              
                  ccc uccccgg  G AG AAUGGGUCGUCA             a
--------accugaccaa   a       GA C  -            caaacccacgacc 


mirna_id: rno-mir-3576
hairpin:
   -  cagg  - g a   g     c  aa        c     -ua  auuca  c 
ucc gc    gc a u uuu auacu ga  agaaauua ccuug   ug     uc a
||| ||    || | | ||| ||||| ||  |||||||| |||||   ||     || a
agg cg    cg u a aaa uauga cu  UCUUUAAU GGAAC   AC     ag a
   a  -aca  a g c   g     a  CC        A     CAC  Aaacg  a 


mirna_id: rno-mir-3577
hairpin:
   u   -  uuagu  a   u    -u   a                 ---------    c 
acg ggu cc     gg ggu ugcu  guu uaggggcuaagaggggc         cagg g
||| ||| ||     || ||| ||||  ||| |||||||||||||||||         ||||  
ugc cua gg     cc ucg acgg  cgG AUUCCCGGUUCUCCCUG         gucc u
   -   c  --uau  a   u    cu   -                 UCUacuacu    g 


mirna_id: rno-mir-1912
hairpin:
a          ggau  G           GG  A    gauuu 
 cuagucucua    gU CUCAUUGCAUG  CU UGUa     c
 ||||||||||    || |||||||||||  || ||||     u
 gguuagagau    ca GAGUGACGUAC  GA ACau     a
-          aguu  A           AA  C    aauuu 


mirna_id: rno-mir-3578
hairpin:
u   ca    ga    ------  a    -   aaa     a   a   au      --a  u 
 cuc  agcu  gcau      ug uacu gag   agauc acc ugu  uauucg   ag c
 |||  ||||  ||||      || |||| |||   ||||| ||| |||  ||||||   ||  
 gag  ucga  cgug      ac auga cuu   UCUAG UGG ACA  AUAAGC   uc a
g   --    gc    gagacg  c    a   ccc     C   C   AU      Gaa  g 


mirna_id: rno-mir-3579
hairpin:
acccuccacgaaugacuuugauaa          -ug       cu    a  ac  a 
                        ugagaagaug   gaccaua  acau cg  ac g
                        ||||||||||   |||||||  |||| ||  ||  
                        acuuuucuAC   CUGGUAU  UGUA GC  ug a
----gugggagagagguaccaugg          CAA       CU    C  Ga  a 


mirna_id: rno-mir-3580
hairpin:
-   u   a   c     UG    U        G   u  g 
 gug gcu ugc cUGCU  UACU AUUCUGGU ACa ga g
 ||| ||| ||| |||||  |||| |||||||| ||| ||  
 cac uga aug GAUGA  AUGA UGGGAUCA Ugu cu u
c   u   a   A     GU    -        G   -  a 


mirna_id: rno-mir-409b
hairpin:
u  a   -  aaa       CA         A  -    c 
 ug uac cg   AGGGGUU  CCGAGCAAC UU CGuc u
 || ||| ||   |||||||  ||||||||| || |||| c
 ac aug gc   ucuccaa  ggcucguug aa guag c
-  c   a  cuc       ug         a  c    a 


mirna_id: rno-mir-3596b
hairpin:
-   -    a   -   c  c    c        aacuccuugugggc 
 ggc ccua gaa agg ag aggu guauaguu              a
 ||| |||| ||| ||| || |||| ||||||||               
 ccg ggau cuu UCC UC UCCA CGUAUCAA              a
c   a    c   c   A  A    A        aaucccgucucuaa 


mirna_id: rno-mir-3582
hairpin:
-  ug  uguccu      auca    aua    C       U   G           - auu 
 gc  gc      guggca    augc   gcua AGCUGGU GAA GGGACCAAauc c   g
 ||  ||      ||||||    ||||   |||| ||||||| ||| ||||||||||| |   a
 ug  cg      cgccgu    uacg   cgau ucgacca uuu ccuugguuuag g   a
u  gu  -----u      ----    aaa    u       u   a           c gag 


mirna_id: rno-mir-3583
hairpin:
-      u   -  -----          UUC  A   C      g a 
 cacuaa ggu gA     GCAUGAAGAG   AG UCA GUUcau a g
 |||||| ||| ||     ||||||||||   || ||| |||||| | u
 gugguu cua cu     CGUACUUCUC   UC AGU Caagua u g
c      -   u  guuGA          UCU  -   C      g c 


mirna_id: rno-mir-3584
hairpin:
-    a    g c    GGAG     -  G    ga       c 
 guag gcug g GGGA    UCCAG GA GCgg  gcugccg g
 |||| |||| | ||||    ||||| || ||||  ||||||| g
 cguc cgac c CCCU    AGGUC CU CGCC  CGauggu u
a    -    g -    ----     U  A    --       c 


mirna_id: rno-mir-3596c
hairpin:
c   uu  ag   agg    ag      gaa  c       cc       -  ucuccuc   u 
 ccc  cc  ugc   gcgc  ccuggg   ag uaggagg  guauagu ga       ggg g
 |||  ||  |||   ||||  ||||||   || |||||||  ||||||| ||       ||| u
 ggg  gg  acg   cgcg  gggccc   UC AUCCUCC  CAUAUCA cu       ccu c
-   -u  --   --g    gg      gAC  C       AA       a  -------   u 


mirna_id: rno-mir-3585
hairpin:
         a   aau -   -     g            G    U   U      ggga 
gccacaugg gca   c ugu gugca ugcuuUUCACAA AAGG GUC UUCAUg    u
||||||||| |||   | ||| ||||| |||||||||||| |||| ||| ||||||     
ugguguguc cgu   g aca caugu augaggAGUGUU UUCC CGG AAGUac    u
         -   aau u   a     a            G    -   C      aaaa 


mirna_id: rno-mir-3586
hairpin:
c   -ag u      --------  -  -aUC         A      - u          ggga g 
 ggg   g gaguau        ga cg    CCUGUCCUC AGGAGc c cagucuagua    g a
 |||   | ||||||        || ||    ||||||||| |||||| | ||||||||||    |  
 ccc   c cucgug        cu gc    ggacgggAG UCCUCG G GUCAGAUCAU    c g
a   gua -      ucuacuac  c  gaaa         C      A U          ---A a 


mirna_id: rno-mir-2964
hairpin:
a   -   -a   ca     A   -      C A       ------------   u 
 gac cgg  gcu  accac GAU GUCCAG C CAAUUCU            CGg u
 ||| |||  |||  ||||| ||| |||||| | |||||||            |||  
 uug guc  cga  uggug cua cagguu g guuaaga            gcc g
-   a   cc   ag     a   a      u c       acaugcucagac   g 


mirna_id: rno-mir-3587
hairpin:
u   g   u  g  -gc     ---      cc 
 ugu ugg cg ca   gaagu   uguucu  a
 ||| ||| || ||   |||||   ||||||   
 aca auC GU GU   CUUUA   ACAAga  c
a   g   -  G  AAA     GUC      ac 


mirna_id: rno-mir-702
hairpin:
----- U           UU  CA     -   cca  cu  -    -  --  c    u 
     G GAGUGGGGUGG  GG  UGggu ugc   gu  gg ggac uc  ga gcug g
     | |||||||||||  ||  ||||| |||   ||  || |||| ||  || |||| u
     C CUCACCCCAUU  CC  ACCCG acg   ca  cc ccug ag  cu cgac c
cgggA -           UC  --     U   ---  cu  u    u  uc  c    a 


mirna_id: rno-mir-3596a
hairpin:
  ug  u  --u   a -     a  -aa  c   g   c    c    aucucccuu 
gu  cu ug   gca g uccca gg   ag uag agg ugua aguu         g
||  || ||   ||| | ||||| ||   || ||| ||| |||| ||||         u
cg  ga ac   cgu c agggu cc   UC AUC UCC ACAU UCAA         u
  gu  c  ugc   a g     -  gAC  C   A   A    A    aucucaaug 


mirna_id: rno-mir-3588
hairpin:
    -uggu   --u  ccg     g    -a   g            u  uac 
cugc     acc   cu   ccuag uccc  aga ccugacuuguga gu   u
||||     |||   ||   ||||| ||||  ||| |||||||||||| ||   a
gacg     ugg   ga   ggauc AGGG  UCU GGAUUGAACACU ca   a
    uaguu   ucu  aaa     -    AC   G            c  uaa 


mirna_id: rno-mir-3589
hairpin:
    ---cg  c      a   u    a A  AAA    C         ----- -   a 
ucca     aa uuggug uac ccag G GG   CCAG AAGUGUUGA     C gcu a
||||     || |||||| ||| |||| | ||   |||| |||||||||     | ||| c
aggu     uu aacuac gug gguc c cc   gguc uucauaacu     g cgg c
    cauca  u      -   -    a c  cuc    c         acaaa a   u 


mirna_id: rno-mir-3590
hairpin:
     aU  C     A      CA     c -g   a 
ggccg  GC CUUUU ACAUUG  CUGcu g  uac c
|||||  || ||||| ||||||  ||||| |  |||  
ccggc  CG GAAAA UGUAAC  GAUga c  aug g
     CU  A     G      AC     - ag   u 


mirna_id: rno-mir-2985
hairpin:
    -ccacac  a      ccu     a         a   g           g 
aucg       cu aaggau   cauua ggugggugg aua uauaacaaugu c
||||       || ||||||   ||||| ||||||||| ||| ||||||||||| u
uggc       ga uuucug   guagu CCAUCCACC UAU AUAUUGUugua c
    aaucuca  a      --u     C         C   G           a 


mirna_id: rno-mir-1249
hairpin:
-     cu cuc   -uucuu      au  -         a     u    caa     cua 
 ucuug  g   cga      guuugc  gg ggaggaggg gggga gggc   guucc   u
 |||||  |   |||      ||||||  || ||||||||| ||||| ||||   |||||    
 agaac  c   gcu      caagcg  cc CUUCUUCCC CCCCU CCCG   CAagg   g
c     uu -cu   cauccu      gu  A         -     U    ---     ucc 


mirna_id: rno-mir-3591
hairpin:
  ag      -ag   -     u    g uu       ug    c     a      
gu  acggau   ccu agcag agcu u  aguguga  augg guuug uguuu 
||  ||||||   ||| ||||| |||| |  |||||||  |||| ||||| |||| u
cg  ugucug   gga ucguc ucga A  UCACACU  UACC CAAac acagg 
  ga      aga   a     -    g CC       GU    A     -      


mirna_id: rno-mir-344b-1
hairpin:
ag    - --------------ugau     A    GC         U        u 
  agac c                  cAGUC GGCU  UGGUUAUAU Ccaggacu c
  |||| |                  ||||| ||||  ||||||||| |||||||| u
  ucug g                  GUCAG CCGA  ACCAAUAUA Gguccugg c
--    u uaagaaugaaaauaaauU     C    -A         -        u 


mirna_id: rno-mir-3592
hairpin:
-   -  uagaggua  a  ----       -   aaAAGU     C    AAU       caca 
 guc cu        gc uu    ugguacu gaa      GUUGU CGUG   GAUUcgu    a
 ||| ||        || ||    ||||||| |||      ||||| ||||   |||||||     
 cag ga        cg aa    accauga cuu      caaca gcac   cuaagcg    g
a   a  --------  a  agac       a   -cucuu     a    cac       aaau 


mirna_id: rno-mir-3593
hairpin:
    ca  a a -ga    auuuU       GC            gcu 
ccau  cc c c   cugg     GGCCUCC  AGGGUUGAAGCU   a
||||  || | |   ||||     |||||||  ||||||||||||    
ggug  gg g g   gACU     CCGGGGG  UUCCAACUUCga   g
    -a  a a agg    -----       AA            aga 


mirna_id: rno-mir-3594
hairpin:
g   -g   CCA        - A       ca  g 
 gca  agC   GGGCAGAG C GUGUGAA  gc c
 |||  |||   |||||||| | |||||||  ||  
 ugU  UCG   CCCGUCUC G CACACuu  ug u
-   GA   ---        C C       -c  u 


mirna_id: rno-mir-3120
hairpin:
-  u  ucauuca   u             a           ug c      a    ugag 
 gg ug       ggc ggguugucaugug cugccugucug  c ugcugu cagg    c
 || ||       ||| ||||||||||||| |||||||||||  | |||||| ||||    g
 cc ac       cug cucaacaguacac gACGGACAGAU  G ACGACA gucu    g
a  u  -------   u             a           GU A      C    ugua 


mirna_id: rno-mir-741
hairpin:
-      uc   u  a             AU     C  A   ug aa 
 aauguc  aug gc uuggucUACAUAG  UGGUA CU UCA  u  a
 ||||||  ||| || |||||||||||||  ||||| || |||  |  a
 uuacag  uac cg aacUAGAUGUAUC  ACCGU GA Agu  g  u
c      --   u  c             GC     A  A   gu aa 


mirna_id: rno-mir-3595
hairpin:
g   uu  ccaagcagca       cug    c            -   C  Uua  -  uu 
 ugg  uc          uuugaua   aaaa GUGGAUUUUCCU CUA GA   gu ca  a
 |||  ||          |||||||   |||| |||||||||||| ||| ||   || ||  a
 acc  ag          aaacuau   uuuu caucuaagagga gau cu   ca gu  u
g   -u  -cucaacaag       aaa    c            a   a  ---  u  ua 


mirna_id: rno-mir-328b
hairpin:
     ---a   gg  g    gaag   cga   a     -u   a   -       -a    c 
ggagg    ggg  ag gagg    ggg   ggg ggggc  aga ggu agucggc  gaug a
|||||    |||  || ||||    |||   ||| |||||  ||| ||| |||||||  ||||  
ccucc    ccc  uc cucc    ccc   ccc UCCCG  UCU CCG UCggucg  uuac a
     ggug   aa  a    ---a   ---   A     UC   C   G       ga    c 


mirna_id: cin-mir-1
hairpin:
--ACC             C      gac    aaua   ug    a  uu 
     UACUUCUUUACAU UUCaua   uaag    ccg  gcug ca  u
     ||||||||||||| ||||||   ||||    |||  |||| ||  c
     AUGAAGAAAUGUA AGGUau   auuc    ggc  ugac gu  a
UGCGU             -      ---    -aac   cu    -  ua 


mirna_id: cin-mir-3575
hairpin:
--       UU    G C     ua  -  c 
  AUCACCA  ACCA G AGUAu  ga ca a
  |||||||  |||| | |||||  || || c
  UAGUGGU  UGGU C UCAUA  cu gu a
CU       --    G A     Gc  c  a 


mirna_id: cin-mir-9
hairpin:
U          CC      A   cac 
 CUUUGGUUAU  AGUUUG ugc   a
 ||||||||||  |||||| |||    
 gaaaccagua  ucaggc acg   c
u          aa      c   uca 


mirna_id: cin-mir-15
hairpin:
U      A    -      U  uuuu 
 AGCAGC CACA AAACUA Ca    c
 |||||| |||| |||||| ||     
 UCGUCG GUGU UUUGGU gu    u
U      A    C      C  uuaa 


mirna_id: cin-mir-3598
hairpin:
U   A    UU         c   -g  a 
 CAC GUGG  AUAUACUGC ugu  gu u
 ||| ||||  ||||||||| |||  ||  
 GUG UACC  UAUAUGACG Aca  ca u
C   C    --         U   ag  u 


mirna_id: cin-mir-29
hairpin:
     CUC  UU      A   -    gu 
ACCGU   CU  UGGUGC Gga guuu  a
|||||   ||  |||||| ||| ||||   
UGGUA   GA  ACCACG Ucu caag  u
     AAA  UU      A   a    ua 


mirna_id: cin-mir-96
hairpin:
UUU        CA  AU      uc 
   GGCACUUG  CA  AUUgau  g
   ||||||||  ||  ||||||  a
   CCGUGAAC  GU  UAAcua  c
CAU        AG  CU      ug 


mirna_id: cin-mir-125
hairpin:
UCC      C  U  A          
   CUGAGA CC AA ACGUGagac 
   |||||| || || |||||||| g
   GACUCU GG UU UGCAcuuug 
--U      C  C  A          


mirna_id: cin-mir-3599
hairpin:
A   G     C         g u 
 ACA UGACA CAUGUAUUG c c
 ||| ||||| ||||||||| | c
 UGU GCUGU GUAUAUAGC g g
G   A     A         g u 


mirna_id: cin-mir-135
hairpin:
---U       U    UC     U  c uc 
    AUGGCUU CUUU  CUGUG Ga g  a
    ||||||| ||||  ||||| || |   
    UACCGAA GAAA  GACAC cu c  u
CUAU       U    -U     U  - ua 


mirna_id: cin-mir-182
hairpin:
C              AA     gu     g    
 UUGGCAAAAUAUAG  CUCac  uggau uua 
 ||||||||||||||  |||||  ||||| || a
 AGCCGUUUUAUGUC  GGGUG  accua agu 
C              --     --     g    


mirna_id: cin-mir-196
hairpin:
--     A                au 
  UAGGU GUUUAAAGUUGUGGag  u
  ||||| ||||||||||||||||  u
  GUCCG CGGAUUUCGACACCuc  g
UC     G                ag 


mirna_id: cin-mir-367
hairpin:
AG        --        G   uaaua 
  UGCUAUUC  AUGUGCAA Agu     c
  ||||||||  |||||||| |||      
  AUGGUAAG  UACACGUU Ucg     a
--        GU        A   ugccg 


mirna_id: cin-mir-375
hairpin:
    U     C    U   A    cauuauuguucuggcg 
ACGU GGUCG ACGA CAA gcgu                u
|||| ||||| |||| ||| ||||                c
UGCG UCGGC UGCU GUU cgua                a
    C     U    U   C    aaauacugcguuaauu 


mirna_id: cin-mir-4220
hairpin:
          -U    U      cug 
UAGUGCAAUU  GUUG AGCUUG   u
||||||||||  |||| ||||||   u
GUCACGUUAA  UAAC UCGAac   a
          CU    -      uua 


mirna_id: cin-mir-92e
hairpin:
    G    UG      -   a  g 
CGGU UGGG  GGUGCA UGA uc u
|||| ||||  |||||| ||| || u
GUCA AUCC  UCACGU AUu ag g
    G    CU      U   a  u 


mirna_id: cin-mir-92d
hairpin:
-     U UUU      UC     uaag 
 GGUCG G   GGUGUA  AUacu    c
 ||||| |   ||||||  |||||    a
 CCGGC C   CCACGU  UAUga    a
G     C UGU      --     caca 


mirna_id: cin-mir-132-2
hairpin:
      UUUU    UC          auu 
UAUGGC    ACAU  CUGUGUguau   a
||||||    ||||  ||||||||||   a
guaccg    ugua  gacacacaug   u
      ---u    -u          acg 


mirna_id: cin-mir-4000c
hairpin:
U     U  CG  G     G  acu 
 GAAAC UG  UG AACGG cc   c
 ||||| ||  || ||||| ||   u
 CUUUG AC  AU UUGCC Gg   g
G     U  AA  G     -  acc 


mirna_id: cin-mir-4000d
hairpin:
U        CAA   C    c    u 
 GAAACUUG   GAA GGGC uugu c
 ||||||||   ||| |||| ||||  
 CUUUGGAC   CUU CCUG aaca u
-        AAC   U    -    a 


mirna_id: cin-mir-4000a-1
hairpin:
--C    C          C      uua 
   GAAA UUGCGUGGAA AGGcug   g
   |||| |||||||||| ||||||    
   CUUU AAUGUACUUU UCCGac   a
UAC    A          -      cua 


mirna_id: cin-mir-4000b-1
hairpin:
-U        CA    C    c    u 
  GAAACUUG  GGAA GGGC uugu c
  ||||||||  |||| |||| ||||  
  CUUUGGAC  CCUU CCUG aacg u
CG        AA    U    -    a 


mirna_id: cin-mir-4000e
hairpin:
U         UC   AC       ---u ua       au  u 
 GAAACUUCU  GGA  AGGccgg    u  aaaucuu  cc a
 |||||||||  |||  |||||||    |  |||||||  || u
 CUUUGGAGG  UCU  UCCGGcc    a  uuuggaa  gg a
A         -C   -C       cuuu gc       cg  u 


mirna_id: cin-mir-4000a-2
hairpin:
--C    C          C      uuu 
   GAAA UUGCGUGGAA AGGcug   g
   |||| |||||||||| ||||||    
   CUUU AAUGUGCUUU UCCGac   a
UAC    A          -      cua 


mirna_id: cin-mir-4000f
hairpin:
          CUG      Gc      
UGAAACUUCG   GAACAG  cgggu 
||||||||||   ||||||  |||| g
AUUUUGAAGC   CUUGUC  Gccca 
          --A      GA      


mirna_id: cin-mir-4000g
hairpin:
      U    U    A         
UGAAAC UCUU AGAA GGGccugc 
|||||| |||| |||| ||||||| u
AUUUUG AGGA UCUU CUCGgauu 
      C    -    A         


mirna_id: cin-mir-4000h
hairpin:
--U         UU  U    G   g 
   GAAACUUGC  AG ACGG ccu a
   |||||||||  || |||| ||| g
   UUUUGAACG  UC UGCC Gga u
UUG         UU  U    -   a 


mirna_id: cin-mir-4000b-2
hairpin:
U        CA    C    c    c 
 GAAACUUG  GGAA GGGC uugu c
 ||||||||  |||| |||| ||||  
 CUUUGGAC  CUUU UCUG aaca c
-        AA    U    -    a 


mirna_id: cin-mir-4000i
hairpin:
-            GG    GG   acg 
 UGAAACUUGCAA  AACA  ccu   a
 ||||||||||||  ||||  |||    
 AUUUUGAACGUU  UUGU  Ggg   u
A            -A    -A   cuu 


mirna_id: cin-mir-4001a-1
hairpin:
UG       UA    CA     cuu 
  GAACUUA  CGAA  GGCug   u
  |||||||  ||||  |||||   g
  UUUGAAU  GCUU  CUGgc   u
-A       UC    CA     uca 


mirna_id: cin-mir-4001i
hairpin:
-A    CUU   AA   A      aac 
  GGAA   CCC  GGA CAGgcu   c
  ||||   |||  ||| ||||||    
  CCUU   GGG  CCU GUCCga   u
AG    -AC   CC   -      cgu 


mirna_id: cin-mir-4002
hairpin:
UUU              U     aa 
   GAACUUGUACGAAU GGcug  c
   |||||||||||||| |||||  a
   CUUGAAUAUGCUUG CCgac  g
AAC              U     ac 


mirna_id: cin-mir-4001a-2
hairpin:
UG      A      CA     ug 
  GAACUU UACGAA  GGCug  c
  |||||| ||||||  |||||  u
  CUUGAA AUGCUU  CCGac  g
AA      C      AA     uu 


mirna_id: cin-mir-4001c
hairpin:
-C    C      A G        uaau  a 
  GGAA UUUCCA G AACAGgcu    gc u
  |||| |||||| | ||||||||    || a
  CCUU AAGGGU C UUGUCCgg    ug u
AC    -      - G        ---c  a 


mirna_id: cin-mir-4001d
hairpin:
--U      U    U  A       caacc 
   GGAACU GUUU GA CAGGcuu     a
   |||||| |||| || |||||||      
   UCUUGA CAAA CU GUCCGag     g
UGC      U    -  C       uacca 


mirna_id: cin-mir-4001e
hairpin:
UG        UU   ACA      a 
  GAACUUAU  UGA   GGcugu u
  ||||||||  |||   |||||| a
  UUUGAAUA  ACU   UCGAca a
--        -U   -AG      a 


mirna_id: cin-mir-4001f
hairpin:
U   A      A  G        -ug    -    ---         uuuu 
 GGA CUUACU AU AACAGgcu   ugua cagc   uuagcacua    c
 ||| |||||| || ||||||||   |||| ||||   |||||||||    g
 CCU GAAUGA UG UUGUCCga   auau guug   gaucguggu    a
A   C      A  -        caa    a    cuc         ugua 


mirna_id: cin-mir-4001g
hairpin:
            uu a   g     c   uuguu 
cuuguuuaggau  g uuc guuuu uag     u
||||||||||||  | ||| ||||| |||      
GGACAGGUUUUA  C AAG Uaaaa guc     u
            UU -   G     u   uaaag 


mirna_id: cin-mir-4001b-1
hairpin:
--   -        -U   C    uguacac 
  UGG AACUUGCA  GAA AGGC       a
  ||| ||||||||  ||| ||||       c
  ACC UUGAACGU  UUU uccg       a
AC   A        UU   u    ccuuagc 


mirna_id: cin-mir-4001h
hairpin:
UG  A    U     CG     uu 
  GA CUUA GCGAA  GGCug  c
  || |||| |||||  |||||   
  CU GAAU UGCUU  CUGac  c
AA  C    U     AA     ug 


mirna_id: cin-mir-4001b-2
hairpin:
U   A    CAU          uuu 
 GGA CUUG   GAACAGGCug   a
 ||| ||||   ||||||||||    
 CCU GAAC   UUUGUCUGac   u
-   G    CAU          uua 


mirna_id: cin-mir-4003a-1
hairpin:
UGA        UAC        -gg   u 
   GUUGGUUA   AUUCUUgc   uau a
   ||||||||   ||||||||   |||  
   CAACCAAU   UAAGAACg   aug a
ACA        -UU        aca   a 


mirna_id: cin-mir-4005a
hairpin:
-U           A  AUA      uau 
  GAGUUGGUGCU UC   CUugug   u
  ||||||||||| ||   ||||||    
  UUCGACCAUGA AG   GAACac   a
GU           A  --G      ugc 


mirna_id: cin-mir-4003c
hairpin:
U A    GU  U         aa   a 
 G GUUG  UA CAUUGUUGc  ugu a
 | ||||  || |||||||||  ||| g
 C UAAC  AU GUAGCAAUg  aca u
A G    UG  U         --   a 


mirna_id: cin-mir-4003a-2
hairpin:
UGA        UAC        ---g    u 
   GUUGGUUA   AUUCUUgc    auau u
   ||||||||   ||||||||    ||||  
   CAACCAAU   UAAGAACg    uaug a
ACA        -UU        auaa    a 


mirna_id: cin-mir-4003a-3
hairpin:
UGA        UAC        -ag   uu 
   GUUGGUUA   AUUCUUgc   uau  a
   ||||||||   ||||||||   |||   
   CAACCAAU   UAAGAACg   aua  a
ACA        -UU        aua   ug 


mirna_id: cin-mir-4005b
hairpin:
U           A  A G      uau 
 GAGUUGGUGCU UC U CUugug   u
 ||||||||||| || | ||||||    
 CUCGACCAUGA AG G GAACac   a
U           -  - G      ugc 


mirna_id: cin-mir-4003a-4
hairpin:
UGA        UAC        -gg   u 
   GUUGGUUA   AUUCUUgc   uau c
   ||||||||   ||||||||   |||  
   cgaccaau   uaagaacg   aug a
aca        -uu        aca   a 


mirna_id: cin-mir-4003b
hairpin:
--UGA         U         Gauauu 
     GUUGGUUAU CAAUCUUGC      u
     ||||||||| |||||||||       
     CAACCAAUG GUUAGAACg      a
AAUCA         -         augaca 


mirna_id: cin-mir-4004
hairpin:
G      U  U    ---U    Ucca 
 UGAGUU GU GUAU    GUGG    u
 |||||| || ||||    ||||     
 acucaa ca caua    cacu    g
a      -  u    uauu    gucg 


mirna_id: cin-mir-4006b
hairpin:
U G        C    G     cg 
 G AACAUGUA GUAA GGCug  u
 | |||||||| |||| |||||   
 C UUGUAUAU CAUU UCGac  u
A G        U    A     cu 


mirna_id: cin-mir-4006c
hairpin:
U        U         C   u 
 GGAACAUG AAAUAAGGG ugu u
 |||||||| ||||||||| ||| a
 CUUUGUAU UUUGUUUCC acg u
A        C         U   c 


mirna_id: cin-mir-4006d
hairpin:
-UG     UA   G          ug 
   GAACA  CAG UAAGGGCugc  u
   |||||  ||| ||||||||||  c
   CUUGU  GUC AUUUCUgacg  a
AAA     GG   A          cu 


mirna_id: cin-mir-4006a-1
hairpin:
UG   -    U      G     u 
  GAA CAUG AAGUAA GGCug c
  ||| |||| |||||| ||||| a
  CUU GUAC UUUAUU CUGac a
-A   C    U      A     a 


mirna_id: cin-mir-4006e
hairpin:
UG        UC U        g 
  GAACAUGA  G AAGGGCug c
  ||||||||  | |||||||| g
  CUUGUAUU  C UUCCUGac g
--        CC U        u 


mirna_id: cin-mir-4006a-2
hairpin:
-          AA    G      cc 
 UGGAACAUGU  GUAA GGCugc  a
 ||||||||||  |||| ||||||   
 AUUUUGUACA  CAUU CUGacg  u
C          AC    G      ug 


mirna_id: cin-mir-4006a-3
hairpin:
U        U      G   ugua 
 GGAACAUG AAGUAA GGC    u
 |||||||| |||||| |||    u
 CUUUGUAC UUCAUU CUG    a
A        C      A   ucuu 


mirna_id: cin-mir-4006f
hairpin:
---UG     U    G      C  uu 
     GAACA GCAG UAAGGG ug  u
     ||||| |||| |||||| ||   
     UUUGU UGUC AUUCCC ac  c
CAAAA     C    A      A  cc 


mirna_id: cin-mir-4006g
hairpin:
GG       CC  U      c  a 
  GAACAUU  GG AAGGGA gu u
  |||||||  || |||||| || u
  CUUGUAA  CC UUCCUU ca u
-G       CA  U      U  a 


mirna_id: cin-mir-4007
hairpin:
U   -     -   AAU      guaguu 
 UGA CUUUC AAG   UAGGUu      u
 ||| ||||| |||   ||||||       
 acu gaaag uuc   auccaa      u
a   u     a   cuu      auuugg 


mirna_id: cin-mir-1502a
hairpin:
-    A     U     A      uaaacc 
 UUGA CUUUC AAGGA UAGguu      a
 |||| ||||| ||||| ||||||       
 AACU GAAAG UUCUU AUCCaa      a
C    -     -     A      caucaa 


mirna_id: cin-mir-1502b
hairpin:
-      UU   AC      G     caua 
 UGAACU  ACC  GAAAAG ucugu    u
 ||||||  |||  |||||| |||||     
 ACUUGA  UGG  CUUUUC AGAca    a
C      --   -A      -     caau 


mirna_id: cin-mir-1502c
hairpin:
U     UUA          G     uaau 
 GAACU   CCAUGAAAAA ccugu    u
 |||||   |||||||||| |||||     
 CUUGA   GGUACUUUUU GGAcg    g
G     ---          G     uaaa 


mirna_id: cin-mir-1502d
hairpin:
-U    UU    A   A       uu uuu 
  GAAC  UCCC GGA UAAGucu  c   g
  ||||  |||| ||| |||||||  |    
  CUUG  AGGG CCU AUUCAga  g   u
CU    --    C   C       cu uau 


mirna_id: cin-mir-4008a
hairpin:
U     UAUGC   A U          u  aa 
 GGCAG     GCA G UAGgcccuuu gu  u
 |||||     ||| | |||||||||| ||   
 CCGUC     UGU C AUUUGGGAaa ca  a
A     -----   C U          -  gu 


mirna_id: cin-mir-4008b
hairpin:
U     UGAUC   A     c       aaca  u 
 GGCAG     GCA GUUAG gcccugu    gc u
 |||||     ||| ||||| |||||||    ||  
 CCGUC     CGU CGAUC UGGGAca    cg a
-     -----   C     -       ---a  a 


mirna_id: cin-mir-4008c
hairpin:
U     UGAUC    G     g      ---  u 
 GGCAG     GCAA UUAGu cccugu   ug u
 |||||     |||| ||||| ||||||   || u
 CCGUC     CGUU AAUCG GGGAca   ac u
A     -----    A     -      uau  g 


mirna_id: cin-mir-4009a
hairpin:
--   U UC         G   uauu 
  GGU U  CAUGUGUAA AGC    a
  ||| |  ||||||||| |||    u
  CCA G  GUACACGUU Ucg    g
AA   U UU         A   uauc 


mirna_id: cin-mir-4009b
hairpin:
--        U     U   G   aa 
  GGUAUGUU AGUGU CAA Agc  g
  |||||||| ||||| ||| |||  c
  CCAUGUAA UCACA GUU Ucg  a
UC        -     C   A   au 


mirna_id: cin-mir-4009c
hairpin:
      c    -u    cc   uuau 
gguaca ugaa  ugca  agc    u
|||||| ||||  ||||  |||     
CCAUGU AUUU  ACGU  Ucg    a
      C    UC    UA   ucuu 


mirna_id: cin-mir-4010
hairpin:
AAC     U   G     A    auga   a 
   GUAUG CGA CAAAC Uugc    guc u
   ||||| ||| ||||| ||||    ||| c
   CAUAC GCU GUUUG AACg    cag a
CUU     C   -     -    -gua   u 


mirna_id: cin-mir-4011a
hairpin:
CA        -            gugaau 
  CAGUGGAG GUAAAGAUUGug      u
  |||||||| ||||||||||||       
  GUCACCUU CGUUUUUAGCac      u
-C        U            aaguaa 


mirna_id: cin-mir-4011b
hairpin:
-UC        G  A    UU     gug 
   ACAGUGGA GU UACC  guugu   a
   |||||||| || ||||  |||||    
   UGUCACUU CG AUGG  CAaca   c
CAA        A  -    --     aug 


mirna_id: cin-mir-4012-1
hairpin:
A         --U    U         g    u 
 AGCUUAUGU   CAUG AUGCugugu uaua a
 |||||||||   |||| ||||||||| ||||  
 ucgagugua   guau uacgacaug gugu u
a         uau    -         -    g 


mirna_id: cin-mir-4012-2
hairpin:
A         U    U        uguau 
 AGCUUAUGU CAUG AUGCugug     a
 ||||||||| |||| ||||||||     u
 UCGAGUGUA GUAU UACGAcau     a
-         U    -        ggugu 


mirna_id: cin-mir-4013a
hairpin:
AGA      A       AUGcgu   u 
   CUUGUA UAGCAGC      cgg u
   |||||| |||||||      ||| a
   GAACGU AUCGUCG      gcc a
CCC      A       ---GAU   a 


mirna_id: cin-mir-4013b
hairpin:
UUA     U   A    A    uu 
   CUUGC UUA CAGU UGcg  a
   ||||| ||| |||| ||||  u
   GAACG AAU GUCG AUgc  u
--C     U   C    G    ua 


mirna_id: cin-mir-4014-1
hairpin:
GC      GA         C   aau 
  UACGCA  CUUUCUGUA ugu   u
  ||||||  ||||||||| |||    
  GUGUGU  GAAAGACAU aca   u
GU      GC         U   aag 


mirna_id: cin-mir-4014-2
hairpin:
G   -    A        G    uua 
 CAC CACG GCUUUUUG AAug   a
 ||| |||| |||||||| ||||    
 GUG GUGU CGAAAGAC UUac   c
-   U    G        A    uug 


mirna_id: cin-mir-4015-1
hairpin:
  A     A       UC    ug 
AC AUGAA UUAACCU  UCug  a
|| ||||| |||||||  ||||   
UG UACUU AGUUGGA  GGac  c
  C     A       UA    ug 


mirna_id: cin-mir-4016-1
hairpin:
ucaaacuuauuuucau          g     --    uau   aa 
                gauuauagaa agaaa  ugau   agg  g
                |||||||||| |||||  ||||   |||   
                CUAGUGUCUU Uuuuu  acug   ucc  a
---------GGAAAUU          G     ug    ucu   ag 


mirna_id: cin-mir-4016-2
hairpin:
U   C              acgaga 
 GUU UGUGAUCUUAAAGG      c
 ||| ||||||||||||||      a
 caa acacuagaauuucc      g
a   a              aaaaca 


mirna_id: cin-mir-4017-1
hairpin:
-U UG              C  uguau 
  G  CUGUAUAUGCACUU Ua     u
  |  |||||||||||||| ||      
  C  GGUAUGUACGUGAA au     u
AU GU              U  uuuaa 


mirna_id: cin-mir-4019
hairpin:
G  U      -C      A    aga 
 GG GCAUUG  GGAGCG GCug   u
 || ||||||  |||||| ||||    
 CC UGUAAC  CCUUGC Cgac   c
G  U      AA      C    aug 


mirna_id: cin-mir-4018a
hairpin:
C  AA      U   A       uac 
 GG  CAUUGU GGA CGGGcug   g
 ||  |||||| ||| |||||||    
 CC  GUAACG CCU GCUCGac   a
C  AC      -   C       ucu 


mirna_id: cin-mir-4018b
hairpin:
A     AUU           g    uu ----aa     uc 
 GGAAC   CUGUGGAACGG cugg  u      accgg  u
 |||||   ||||||||||| ||||  |      |||||   
 CCUUG   GGCACUUUGUC GAcc  g      uggcc  g
A     --C           -    uu ggcuua     ua 


mirna_id: cin-mir-4020a
hairpin:
UGU       -UUG  G -       uguu   a 
   GGUUAAG    GU C Aaaugau    aca u
   |||||||    || | |||||||    ||| a
   ccgauuc    ca g uuuauua    ugu c
uuu       caaa  g a       ---u   u 


mirna_id: cin-mir-4020b
hairpin:
-      ---U   -UU     -   a    guu 
 GUGUGG    UGG   GGUGG UUG uggc   c
 ||||||    |||   ||||| ||| ||||   u
 CACGCC    ACU   CCAcu aac auug   a
A      CCUU   UAC     u   -    aau 


mirna_id: cin-mir-4021
hairpin:
GU   U           AAA       a 
  ACG ACGUCAUAAUA   uauugug g
  ||| |||||||||||   |||||||  
  UGC UGCAGUGUUAU   Auaaugc g
AU   -           GAA       u 


mirna_id: cin-mir-4022
hairpin:
----u       ag    u     uu u 
     guauaag  ucau guuaa  g u
     |||||||  |||| |||||  | c
     UAUAUUU  AGUA UAAuu  u a
ACAUU       -G    -     uu u 


mirna_id: cin-mir-4023
hairpin:
guuuguuuguuuuuuuacauccaa    c  a    UAA 
                        guua aa uuac   G
                        |||| || ||||    
                        CAAU UU AAUG   U
------------------------    C  A    UGU 


mirna_id: cin-mir-4024
hairpin:
UUU       G          uacauagcaacaugca 
   GUAGGAU AAAAGGUGaa                c
   ||||||| ||||||||||                c
   UAUCCUA UUUUCUACUU                a
--G       G          Uuauauuuaaauuaua 


mirna_id: cin-mir-4025
hairpin:
GUAU   UU    --          uuuca 
    GUG  UGGU  GAAAAGAauu     a
    |||  ||||  ||||||||||     a
    cau  acca  uuuuucuuga     a
----   cu    aa          ucuaa 


mirna_id: cin-mir-4026
hairpin:
-   A             UU   ac 
 GUA GUGAUGACGUCAU  Gac  g
 ||| |||||||||||||  |||  u
 CAU CAUUACUGCAGUA  CUg  c
G   -             -U   ca 


mirna_id: cin-mir-4027
hairpin:
GU          CA         ua   au   -u        cg 
  UGAACAUAAA  UAAUAUaaa  aau  auu  uauuuuag  g
  ||||||||||  |||||||||  |||  |||  ||||||||  u
  ACUUGUAUUU  AUUAUAUuu  uua  uaa  auaaaguu  a
-G          UC         ug   ac   uc        ua 


mirna_id: cin-mir-4028
hairpin:
u     -c     c ug       auu 
 gcaac  cagca u  uuaauau   g
 |||||  ||||| |  |||||||    
 CGUUG  GUUGU A  AAUUaua   u
A     UU     - GU       gau 


mirna_id: cin-mir-4029
hairpin:
A       -ACU           auu 
 AAGUGCA    GUGUAAACCug   a
 |||||||    |||||||||||   u
 UUCACGU    UACAUUUGgac   a
A       ACGU           guc 


mirna_id: cin-mir-4030
hairpin:
A   U   AC            uaa 
 AAG GCA  UUUGAUAGUGug   c
 ||| |||  ||||||||||||    
 UUC CGU  AGACUAUCGCac   u
A   U   GU            cuc 


mirna_id: cin-mir-4031
hairpin:
    A    U   CG   A   uuaa 
CCCA AGUG CGG  CAU Uuc    a
|||| |||| |||  ||| |||     
GGGU UCGC GCC  GUA Aag    u
    C    U   AU   C   ccaa 


mirna_id: cin-mir-4032
hairpin:
AC          G  UU       gua 
  ACAGUGAUGA AG  AGCuggu   u
  |||||||||| ||  |||||||   a
  UGUUACUGCU UC  UCGACcg   a
UA          A  --       ucu 


mirna_id: cin-mir-4033
hairpin:
-       AAU     G      uggc 
 GGAGCAC   AUGUA UUUAug    u
 |||||||   ||||| ||||||    u
 CCUCGUG   UACGU GAAUac    a
A       CGU     -      uuuu 


mirna_id: cin-mir-4034
hairpin:
-G A       CU         --   c 
  C CAGUGCU  AGGAAAGUa  aag u
  | |||||||  |||||||||  |||  
  G GUCACGG  UCUUUUCau  uuc c
GA C       UC         gc   a 


mirna_id: cin-mir-4035
hairpin:
G     A     A   G      auuua 
 GCAAU UCACG UGU CUGUUG     g
 ||||| ||||| ||| ||||||      
 CGUUA AGUGU ACA GACAgc     u
A     C     C   -      acaag 


mirna_id: cin-mir-4036
hairpin:
-U          C    A      ug 
  GUGCAAAGCC AAUC UGUCUa  c
  |||||||||| |||| ||||||  c
  UACGUUUUGG UUGG GCAGau  a
UG          -    -      ug 


mirna_id: cin-mir-4037
hairpin:
ACA     AC    C   A     -c  a 
   AUUGC  UCGU UGU CCGcc  cc u
   |||||  |||| ||| |||||  ||  
   UAACG  AGCA ACA GGCgg  gg g
UCG     GU    -   -     ua  c 


mirna_id: cin-mir-4038
hairpin:
C        C   A     Au   guu 
 GGUCAAUA CAG UGCAA  caa   c
 |||||||| ||| |||||  |||    
 CUAGUUAU GUC ACGUU  guu   a
U        U   -     AC   gua 


mirna_id: cin-mir-4039
hairpin:
U   UG    UG          ua 
 AUA  AAGA  UAAGCUAUuc  u
 |||  ||||  ||||||||||   
 UAU  UUCU  GUUUGAUAag  a
U   GU    UU          uu 


mirna_id: cin-mir-4040
hairpin:
   U       C  A        aug 
UCG CUUUCUG AU UGGUUGUU   u
||| ||||||| || ||||||||    
AGC GAAAGAC UA ACCAACaa   g
   U       -  G        ccu 


mirna_id: cin-mir-4041
hairpin:
        C   U     C     cu 
CAGUGAUU AAG CCUAU Ugcug  u
|||||||| ||| ||||| |||||   
GUUACUAA UUC GGAUA ACggc  c
        U   U     -     ua 


mirna_id: cin-mir-4042
hairpin:
U  A     A   A     -   c au 
 CA UGAUU AAG CCUAU Ugc g  g
 || ||||| ||| ||||| ||| |   
 GU ACUAA UUC GGAUA Acg c  a
-  C     G   A     G   a ga 


mirna_id: cin-mir-4043
hairpin:
C    A U  U        -Ua  ugc 
 GUUC G CA UCUAUGCA   cg   u
 |||| | || ||||||||   ||    
 CAAG C GU AGAUACGU   gc   a
A    C U  U        Uug  cau 


mirna_id: cin-mir-4044
hairpin:
-            G         cccuu 
 AGUUGGUAGACU AUUUCAGuu     u
 |||||||||||| |||||||||      
 UCAAUCGUCUGG UAAAGUcag     u
A            A         cuuuc 


mirna_id: cin-mir-4045
hairpin:
C        A   A   G      gg 
 CACAAUGA AGU GAU UCCGuu  c
 |||||||| ||| ||| ||||||  c
 GUGUUACU UCA CUA GGGCaa  a
A        A   -   -      au 


mirna_id: cin-mir-4046
hairpin:
    GU  -UG         U   uauu 
CAGG  GU   CGUGUUACU gug    a
||||  ||   ||||||||| |||    u
GUCC  CA   GCACAAUGA Uac    g
    UG  UAA         C   uaca 


mirna_id: cin-mir-4047
hairpin:
CC           A        -  u 
  AGACACUCAGA ACACGAuu ug c
  ||||||||||| |||||||| ||  
  UUUGUGAGUCU UGUGUUaa ac g
UC           A        c  a 


mirna_id: cin-mir-4048
hairpin:
G     UG   A   U    U    cuuu 
 CACCU  GUC CCA UAUU Gcuc    u
 |||||  ||| ||| |||| ||||     
 GUGGA  CAG GGU AUGA CGag    a
G     --   A   C    -    uuau 


mirna_id: cin-mir-4049
hairpin:
-C       U  UU      G C   -c g    a 
  AGGUAAA CU  CAGCUU U gcg  u cgcc c
  ||||||| ||  |||||| | |||  | ||||  
  UCCGUUU GG  GUCGAA a cgu  a gcgg c
AA       C  GU      g c   aa g    u 


mirna_id: cin-mir-4050
hairpin:
       AU      U         a u 
UAGGUAA  CAAAUU CAGGCUGuu g g
|||||||  |||||| ||||||||| | a
AUCCGUU  GUUUAA GUUCGACaa c g
       --      -         c a 


mirna_id: cin-mir-4051
hairpin:
U    C    A    ACUA      u 
 UCAA CAUC CGGC    Uugggu a
 |||| |||| ||||    |||||| a
 AGUU GUGG GCUG    AACCca a
A    A    A    ---G      c 


mirna_id: cin-mir-4052
hairpin:
C   -    CA        A    a 
 AGG CUUG  UUUCAAGU Aguc c
 ||| ||||  |||||||| ||||  
 UCC GGAC  AAAGUUCA Ucag g
-   A    CC        C    u 


mirna_id: cin-mir-4053
hairpin:
-  -      U       CG       a  u 
 CG CCGGGG AUGACGU  Uacugug cg a
 || |||||| |||||||  ||||||| || g
 GC GGCCUC UGCUGCA  AUgacgc gu g
G  A      U       UG       -  u 


mirna_id: cin-mir-4054
hairpin:
UAU  UU    U    U      ua  aa 
   GA  GAUG UUAA GGCucu  ac  a
   ||  |||| |||| ||||||  ||   
   CU  CUAC AGUU UCGAga  ug  a
-GU  UU    C    U      --  ca 


mirna_id: cin-mir-4055
hairpin:
      G   UG        a  uuau 
UAUUCG AAA  UAGGGUGG cg    c
|||||| |||  |||||||| ||    a
GUAAGC UUU  GUCUUACC gc    u
      -   GU        A  uuaa 


mirna_id: cin-mir-4056
hairpin:
AC   U            AU    aaa 
  UGA GUAGAACAAGGC  GCGc   c
  ||| ||||||||||||  ||||    
  ACU CAUCUUGUUCUG  CGCg   a
CC   -            --    cca 


mirna_id: cin-mir-4057
hairpin:
-GG     C  CU      U     g 
   CUUGG GA  GUAGCA Aacac g
   ||||| ||  |||||| ||||| a
   GAACC CU  CAUCGU UUgug u
CUA     A  UU      -     a 


mirna_id: cin-mir-4058
hairpin:
-----AA    GCCG      G  u 
       GGAU    GUUUGA CU u
       ||||    |||||| || a
       uuug    uaaauu ga a
uuuuggg    auua      g  a 


mirna_id: cin-mir-4059
hairpin:
U        AGA          aug 
 AGCAGCAA   CAGUAUUGga   u
 ||||||||   ||||||||||    
 UCGUCGUU   GUCGUAACuu   u
C        CAC          cgu 


mirna_id: cin-mir-4060
hairpin:
        C UU    U     ucga 
AUUUCACU U  CAAC GUUgg    a
|||||||| |  |||| |||||    a
UGAAGUGA G  GUUG CGAcc    u
        C UU    C     uaua 


mirna_id: cin-mir-4061
hairpin:
A     UC C     UG      a 
 GGCGG  C UCAGA  GUUucg u
 |||||  | |||||  ||||||  
 CUGCC  G GGUCU  CAAagu u
A     UU C     CA      c 


mirna_id: cin-mir-4062
hairpin:
C    GCAUC        -    ---     ug 
 GCCU     UUUACAGC UUca   agugc  c
 ||||     |||||||| ||||   |||||   
 CGGA     AAAUGUCG AAgu   uuaug  g
A    -AAUA        U    cag     uu 


mirna_id: cin-mir-4063
hairpin:
AA         CA        a    ga 
  CACCUUAAU  CCAAUGUG uugu  u
  |||||||||  |||||||| ||||  a
  GUGGAAUUA  GGUUACGC Aacg  a
-G         --        A    ac 


mirna_id: cin-mir-4064
hairpin:
-A U    A    -    A     ua 
  G CAGG UUAC GGUU GUUUU  a
  | |||| |||| |||| |||||   
  C GUCC AAUG CCAA CAAaa  a
GC U    C    G    -     uc 


mirna_id: cin-mir-4065
hairpin:
-     -U          CU     u  cg gc ca 
 CACUG  GGAUCUUGUC  AUACu gu  g  g  g
 |||||  ||||||||||  ||||| ||  |  |   
 GUGAC  UCUAGAACAG  UAUga ua  u  c  c
G     UC          -C     c  au aa au 


mirna_id: cin-mir-4066
hairpin:
CCA         C            
   GAUGUGGUG AGGCAUGCGaa 
   ||||||||| |||||||||| a
   CUGUACUAU UCCGUACguug 
-GC         U            


mirna_id: cin-mir-4067
hairpin:
C        GAA     C      uuga 
 AAGGAACG   AUGAG CGuugg    c
 ||||||||   ||||| ||||||    u
 UUCCUUGC   UACUU GCGAcu    u
A        --A     U      ucaa 


mirna_id: cin-mir-4068
hairpin:
-         CC  A     -     uuu uca 
 AAGUCUUUG  CA CAGCA Acaug   c   c
 |||||||||  || ||||| |||||   |    
 UUCGGAAAC  GU GUCGU Uguac   g   c
G         AA  A     A     uuc uua 


mirna_id: cin-mir-4069
hairpin:
CUA   U  CU          u   aag 
   CCC GU  UUAAGCUGag cgc   a
   ||| ||  |||||||||| |||   g
   GGG CA  AAUUCGACUc gug   g
-GC   U  AU          -   acg 


mirna_id: cin-mir-4070
hairpin:
U   A       CA   A      -c  ca 
 CGA UGUUAUG  GGC CGUGca  gu  u
 ||| |||||||  ||| ||||||  ||   
 GCU ACAGUGC  CUG GCACgu  cg  a
-   -       -A   C      au  ag 


mirna_id: cin-mir-4071
hairpin:
C       UA   U  C      u 
 UUGCUCU  CUG GA AUCccu g
 |||||||  ||| || |||||| c
 AACGGGA  GAC CU UAGGga c
A       CA   -  A      a 


mirna_id: cin-mir-4072
hairpin:
--      UU    C          -  a 
  UUUGUU  AAGG UUCAUUUUCU ac a
  ||||||  |||| |||||||||| ||  
  AAACAG  UUCU AGGUAAAAga ug a
CA      --    -          c  u 


mirna_id: cin-mir-4073
hairpin:
         A   U C       uc 
ACGACAAGU GGG C UUUUgcg  a
||||||||| ||| | |||||||  c
UGUUGUUCA CUU G AGGACgc  c
         G   - U       ua 


mirna_id: cin-mir-4074
hairpin:
UGUU       GG      A  uua 
    GACGGCG  GAUGUU gu   u
    |||||||  |||||| ||    
    CUGCCGC  UUGCAA ca   u
ACUU       UA      C  cgg 


mirna_id: cin-mir-4075
hairpin:
---        A U   GA     ucagc      gc   c    aa 
   GGUCCUUG G UCU  GCACc     ggccgc  agc accg  a
   |||||||| | |||  |||||     ||||||  ||| ||||   
   CCGGGAAC C AGA  Ugugg     uuggcg  ucg uggc  a
CCA        - U   AA     -----      -a   -    gu 


mirna_id: cin-mir-4076
hairpin:
C     G         AAU     cau 
 AACGA UCCCUGAAA   CCCga   a
 ||||| |||||||||   |||||   c
 UUGCU AGGGACUUU   GGgcu   a
A     A         -GU     uaa 


mirna_id: cin-mir-4077a
hairpin:
A       AA UG         guuuc 
 AGUUGGA  U  AUUGACUgg     g
 |||||||  |  |||||||||     a
 ucaaccu  a  uaauugacc     a
a       -c gu         auaua 


mirna_id: cin-mir-4077b
hairpin:
A       AU            -gu  u 
 AGUUGGA  UUGAUUGACUgg   gu g
 |||||||  ||||||||||||   ||  
 ucaacuu  aauuaauugacc   ca a
a       -c            aug  a 


mirna_id: cin-mir-4077c
hairpin:
A       A  UG         guuug 
 AGUUGGA GU  AUUGACUgg     a
 ||||||| ||  |||||||||      
 ucaaccu ca  uaauugacc     a
a       -  gu         auaua 


mirna_id: cin-mir-4078
hairpin:
C       GA      G     gu 
 CUUGUAG  GUAAAG GAAac  u
 |||||||  |||||| |||||  u
 GGACGUC  CGUUUC CUUug  a
U       AC      A     ac 


mirna_id: cin-mir-4079
hairpin:
U   U    UA    -          
 GCU CAUC  CUAG GUUAGCUgg 
 ||| ||||  |||| |||||||| a
 CGA GUAG  GAUC CGAUcgaca 
A   U    UC    U          


mirna_id: cin-mir-4080
hairpin:
U   A    A     A C        
 GCU CAUC GCUAG G Uagcugu 
 ||| |||| ||||| | |||||| u
 CGA GUAG UGAUC C AUCgacc 
A   A    A     - A        


mirna_id: cin-mir-4081
hairpin:
          CC           ug 
UAGUUCAACU  AUACAGAAuug  g
||||||||||  |||||||||||   
GUCGAGUUGA  UAUGUCUUGac  u
          -A           uc 


mirna_id: cin-mir-4082
hairpin:
C  C       -        C  ag 
 AG UCAACUU AUACAGAA ug  a
 || ||||||| |||||||| ||   
 UC AGUUGAG UAUGUCUU ac  c
-  A       G        A  ac 


mirna_id: cin-mir-4083
hairpin:
--     UAUAU       CUU  aucuaugca 
  GUGGG     UAGGAAG   cc         a
  |||||     |||||||   ||          
  CACCC     AUCUUUC   gg         u
GA     -UUUU       UAU  ccaaauuua 


mirna_id: cin-mir-4084
hairpin:
-           CU  A      ---    a   cua 
 AGAUCUUCUGG  AU GUUUgu   uuga cuu   u
 |||||||||||  || ||||||   |||| |||   u
 UUUAGAAGACU  UA CAAAca   aacu gaa   c
C           AU  A      uaa    a   uuu 


mirna_id: cin-mir-4085
hairpin:
U    C    UG   G  -      aaua 
 CGCA GUUG  CAG CA AGCagg    g
 |||| ||||  ||| || ||||||     
 GUGU UAAC  GUU GU UCGUcc    a
-    -    CU   -  G      aaca 


mirna_id: cin-mir-4086
hairpin:
     u uc          a  uuuua 
gggag u  ccaucaaaau cu     u
||||| |  |||||||||| ||      
CCCUC A  GGUAGUUUUA ga     a
     C UC          C  uuuua 


mirna_id: cin-mir-4087
hairpin:
--   UU   U  -   -A      auu 
  UCA  UCC CA CCA  UUAUGU   g
  |||  ||| || |||  ||||||   c
  AGU  AGG GU GGU  Aauacg   a
AU   UC   U  A   GC      aaa 


mirna_id: cin-mir-4088
hairpin:
--    --A  AU     -   GGaguacugggcu 
  GACU   UG  GAGAU GUU             c
  ||||   ||  ||||| |||              
  CUGA   AC  CUCUA cag             u
AC    GUC  AC     a   uuaguacgucuag 


mirna_id: cin-mir-4089
hairpin:
C UG  AA          -    a  a  auu 
 U  GA  UGCAUGUGCU UUgc ug cg   u
 |  ||  |||||||||| |||| || ||    
 a  uu  gcguacacga aacg ac gu   u
a gu  ac          c    -  a  aau 


mirna_id: cin-mir-4090
hairpin:
    ua        ----------   a     -gg    a 
uaac  aaucgacu          cgu uguuu   uacu u
||||  ||||||||          ||| |||||   ||||  
GUUG  UUGGUUGA          gua acgaa   auga c
    UG        UGGAcggaag   a     aga    a 


mirna_id: cin-mir-4091
hairpin:
U  C      CUAUC       g     gcaguggcuacacauc 
 GG AGUGAG     GUAGCag cuguu                a
 || ||||||     ||||||| |||||                u
 CC UCACUC     CAUUGUC GACaa                g
U  A      -----       -     acuaaaguacugcagu 


mirna_id: cin-mir-4092
hairpin:
CG       G   AC   AA     c 
  UGUUGUG AGA  GAC  uagcg a
  ||||||| |||  |||  ||||| a
  ACGACAC UCU  CUG  AUcgu c
-A       A   GU   -G     u 


mirna_id: cin-mir-4093
hairpin:
-CU      C     C       -  ---     a 
   CCGCAG UUUUG UGCAUua gu   ugccc u
   |||||| ||||| ||||||| ||   ||||| a
   GGCGUC AAAAC ACGUAgu ca   gcggg a
AUU      -     A       g  uag     a 


mirna_id: cin-mir-4094
hairpin:
-----    UCU      C       cuucuucu     -cu   -   ca    g 
     GUGC   GGGCCU GUUGGag        uugcu   gag cug  cggu c
     ||||   |||||| |||||||        |||||   ||| |||  |||| a
     UACG   UCUGGA CAACCuc        aacga   uuc gau  gucg u
CGGCU    ---      -       --------     aag   u   -c    u 


mirna_id: cin-mir-4095
hairpin:
CUUC      G   C       uu     
    CCUGGG GUG UGGUAgc  ggua 
    |||||| ||| |||||||  ||| c
    gggccc cac acuaucg  cuaa 
aaac      a   c       -u     


mirna_id: cin-mir-4096
hairpin:
     -uuu    a    g ug     u ug  u 
cacaa    gcua auug c  aaacu u  ua u
|||||    |||| |||| |  ||||| |  ||  
GUGUU    CGAU UAAC G  Uuuga a  au g
     UUAU    A    - --     c gu  g 


mirna_id: cin-mir-4097
hairpin:
---CAAUA              aauaac          cu    ugac 
        UAAAGUUGACCUGA      cucauuaacg  gguu    c
        ||||||||||||||      ||||||||||  ||||    u
        GUUUCGACUGGAcu      gagugauugc  ccaa    u
CAACUACC              -ccagu          -u    uuag 


mirna_id: cin-mir-4098
hairpin:
                     -ua    a 
AUCGCUCUGUUAUGCUUCGGu   agcg u
|||||||||||||||||||||   |||| a
UAGCGAGACAAUGCGAAGCCa   uugc u
                     cug    a 


mirna_id: cin-mir-4099
hairpin:
            A     AA  uauaa       --------   u     c 
UUUGGCACCAUG CGAUC  cu     acuaugu        agu agcaa u
|||||||||||| |||||  ||     |||||||        ||| ||||| u
AGACUGUGGUAC GUUAG  ga     ugauacg        uua ucguu u
            A     GC  -----       aaauaugg   u     a 


mirna_id: cin-mir-4100
hairpin:
--    C        U            
  UGAG UUUCGUCU AUGAUUGaugu 
  |||| |||||||| |||||||||| a
  ACUC AAAGUAGA UACUAAuuacu 
GC    A        U            


mirna_id: cin-mir-4101
hairpin:
gug   c      ---     c   u    u 
   cgc uauaua   aucua cgu acuu u
   ||| ||||||   ||||| ||| |||| a
   GUG AUAUGU   UGGAU gca uggg u
--G   U      UGU     u   -    u 


mirna_id: cin-mir-4102
hairpin:
-CG      A -         U   c 
   CAAUAC C AUGGUGUCA auu a
   |||||| | ||||||||| ||| u
   GUUAUG G UACCGCAGU uga u
UUG      C C         c   a 


mirna_id: cin-mir-4077d
hairpin:
A      C   G           ugua 
 AGUUGG UGU AUUUGGCUggu    u
 |||||| ||| |||||||||||    g
 ucaacc aca uaaauugacua    a
a      -   g           uaau 


mirna_id: cin-mir-4103
hairpin:
ac  -   gu    ga   a 
  ca cgg  cugu  cgu g
  || |||  ||||  |||  
  GU GCC  GGCG  GCG c
-U  C   UG    UC   a 


mirna_id: cin-mir-4104
hairpin:
AC    AA    --    ---    -      uu  a 
  GUGA  UUGU  UGAC   UGau uguaua  ug c
  ||||  ||||  ||||   |||| ||||||  ||  
  uacu  agca  acug   auua acauau  ac g
ca    gc    uu    caa    c      -c  u 


mirna_id: cin-mir-4105
hairpin:
AC        U  GU A u  g   -   uc 
  AAAAAACG GG  C C gu ucc ggu  c
  |||||||| ||  | | || ||| |||   
  uuuuuugc cc  g g cg agg ccg  c
aa        -  ug a u  -   u   aa 


mirna_id: cin-mir-4106
hairpin:
-      cc    -         uu 
 aagauu  auca uguuuugca  u
 ||||||  |||| |||||||||   
 UUUUGA  UGGU AUAAAAUgu  u
U      UU    U         uu 


mirna_id: cin-mir-4107
hairpin:
     UAA   AUU  -    a     aa    u  ag 
AUAUC   UUG   GU UGGu uuaua  guau ua  a
|||||   |||   || |||| |||||  |||| ||   
uguag   aac   cg acca aaugu  caua au  u
     ugc   -gu  u    c     ac    c  ag 


mirna_id: cin-mir-4108
hairpin:
       --A        ACuu 
UGUGUGA   GUAGAGGA    g
|||||||   ||||||||    c
auacauu   caucuccu    c
       aag        cuuu 


mirna_id: cin-mir-4109
hairpin:
AC            AC   A   uaacc       uu 
  CCCGCUUAAUCG  CCA guu     ggaccag  u
  ||||||||||||  ||| |||     |||||||   
  GGGCGAAUUAGC  GGU uaa     ccugguu  g
--            CU   G   ----c       cg 


mirna_id: cin-mir-4110
hairpin:
AA              GU    --c    gu 
  CCAUGUUAAUAGCA  UGua   acau  a
  ||||||||||||||  ||||   ||||   
  GGUACAAUUGUUGU  ACau   ugua  u
--              AC    cca    gg 


mirna_id: cin-mir-4111
hairpin:
--      -u   a   uc     uuuau    aa 
  ucacaa  uaa cag  uuuuc     uuac  u
  ||||||  ||| |||  |||||     ||||  u
  GGUGUU  AUU GUU  Aaaag     aaug  u
UG      UU   A   -U     -uuuu    ac 


mirna_id: cin-mir-4112
hairpin:
--      U    UUG      --  uu    uu 
  AUACAU CAUU   ACAUAC  ua  ggca  g
  |||||| ||||   ||||||  ||  ||||  u
  UAUGUA GUAG   UGUAUg  au  uugu  a
GG      -    UAA      ua  uu    uc 


mirna_id: cin-mir-4113
hairpin:
-UCU    U  AAU         u 
    GGUU UC   GUGUAAAuu g
    |||| ||   ||||||||| g
    ccaa ag   cgcauuuaa u
augc    u  guc         u 


mirna_id: cin-mir-4114
hairpin:
-UAA    UAAU   -U         g     a    uuauuauauua 
    GUUG    AUG  UGUGUcuau uuguc auac           u
    ||||    |||  ||||||||| ||||| ||||            
    uaac    ugc  acacagaug aauag ugug           g
aaac    cagu   cc         a     a    cagacacuuca 


mirna_id: cin-mir-4115
hairpin:
C                     aua   cug 
 UUGUCUGCACUCCCGUUCUUU   ggc   a
 |||||||||||||||||||||   |||   a
 AAUAGACGUGAGGGCGAGAaa   ccg   g
C                     --a   aau 


mirna_id: cin-mir-4116
hairpin:
    C     G  AUU    g 
GGGG AAGAU GG   UUgu c
|||| ||||| ||   ||||  
cccc uucua cu   ggca u
    a     g  -au    a 


mirna_id: cin-mir-4117
hairpin:
----------   -G    UGUAAU         u gg  ua 
          UGU  UGAA      AGAAuuuaa u  uu  a
          |||  ||||      ||||||||| |  ||   
          aca  gcuu      uuuuaaauu a  aa  u
acaucaaaaa   ag    ---uuu         u aa  ua 


mirna_id: cin-mir-4118
hairpin:
           u  ag g    gu 
cuuuggugaca ca  u agaa  u
||||||||||| ||  | ||||   
GAGAUCACUGU GU  A Uuuu  u
           U  AA G    gg 


mirna_id: cin-mir-4119
hairpin:
-C    U           A    g aa 
  GUUU GUUUGCCAUUC GCag g  u
  |||| ||||||||||| |||| |  g
  CAAA CGGACGGUAAG Cguu u  a
UA    U           C    g ga 


mirna_id: cin-mir-4120
hairpin:
CAUGA     A      -- Uu    u 
     UGAUG GAAUUU  G  caua c
     ||||| ||||||  |  ||||  
     acuac cuuaga  u  guau u
aagua     -      gu gg    a 


mirna_id: cin-mir-4121
hairpin:
acaua   cuc      -g     a   ac 
     aca   cccaau  cgaca agg  u
     |||   ||||||  ||||| |||   
     UGU   GGGUUG  GUUGU ucu  a
-----   -UU      AG     G   ag 


mirna_id: cin-mir-4122
hairpin:
u        ug    ----      -a      u 
 guuucaaa  gacu    ucaugg  aauguu c
 ||||||||  ||||    ||||||  ||||||  
 CGAAGUUU  UUGA    aguauu  uuacaa a
A        GU    AUCu      aa      u 


mirna_id: cin-mir-4123
hairpin:
A  U       C  CUC     g 
 GC UCUUCCU AG   GCUUU u
 || ||||||| ||   ||||| c
 CG GGAAGGG UC   CGAaa g
G  C       C  AAA     g 


mirna_id: cin-mir-4003d
hairpin:
u a     guau   c   ug  a g 
 g guugg    cca ucu  ca u a
 | |||||    ||| |||  || | a
 C UAACC    GGU AGA  gu a c
A A     -AAU   A   GU  a a 


mirna_id: cin-mir-4124
hairpin:
ACUGUAUGUGAA      UGguaa   uu 
            AAAAUA      agc  u
            ||||||      |||  u
            uuuuau      ucg  u
---------caa      --uuga   ua 


mirna_id: cin-mir-4125
hairpin:
AUCAUU   -             u      au  a    -ua   u 
      UGG CAAAGACAAAGgu auuaaa  aa guuu   uau u
      ||| ||||||||||||| ||||||  || ||||   |||  
      acc guuuuuguuuuca uaauuu  uu cgaa   aua a
--uuuc   u             -      cu  c    uug   u 


mirna_id: cin-mir-4126
hairpin:
U  G    A --UU    --AAU   a   c 
 AA UGCA C    UGAU     acu cca u
 || |||| |    ||||     ||| |||  
 uu acgu g    acua     uga ggu g
u  g    c uagc    agguu   -   a 


mirna_id: cin-mir-4127
hairpin:
-   AG   G U      G    g  a 
 GAC  CUC C CAGCUG CUgu ug u
 |||  ||| | |||||| |||| || a
 UUG  GAG G GUCGAC GAca ac a
G   AA   A U      G    -  u 


mirna_id: cin-mir-4128
hairpin:
   -     -   a    c    gaa   gc  ga 
uuc ccagu cua uuca acac   ugu  uu  u
||| ||||| ||| |||| ||||   |||  ||   
AGG GGUCA GAU GAGU Ugug   aca  aa  c
   A     A   G    U    ---   aa  ag 


mirna_id: cin-mir-4129
hairpin:
---u  g       aa   c 
    uc uuauugg  gac u
    || |||||||  |||  
    GG AAUAAUU  CUg u
CUAC  A       GC   a 


mirna_id: cin-mir-4130
hairpin:
ucaa     --      agaacuagauaa    ga 
    gacac  agcugu            cugu  c
    |||||  ||||||            ||||   
    CUGUG  UCGACA            GACa  g
AAUG     CG      ------------    au 


mirna_id: cin-mir-4131
hairpin:
A      -               g 
 CCUAGG AAUUUUGCCACAGuu u
 |||||| |||||||||||||||  
 GGAUCC UUAAAACGGUGUUaa u
-      C               c 


mirna_id: cin-mir-4132
hairpin:
C       -AAA   C      guc 
 AAUGCAA    GGC AUUUGu   g
 |||||||    ||| ||||||    
 UUAUGUU    UCG UAAAca   a
A       GUAG   U      aua 


mirna_id: cin-mir-4133
hairpin:
      c          ga   u     ugucuaa        c 
gcuacg aaacguaaca  caa aauca       cuaauugu a
|||||| ||||||||||  ||| |||||       |||||||| g
CGAUGU UUUGUGUUGU  guu uuagu       gauuaaua u
      U          AC   u     uucuguc        u 


mirna_id: cin-mir-4134
hairpin:
UA      GG  G         gu 
  AAAACA  CA UGUAAAUau  u
  ||||||  || |||||||||  a
  uuuugu  gu acauuuaug  u
-a      aa  g         ug 


mirna_id: cin-mir-4135
hairpin:
--     uau     ugaua     aua 
  cuacc   uuaac     cauca   a
  |||||   |||||     |||||    
  GGUGG   AGUUG     Guagu   g
UC     UUU     -UACC     acu 


mirna_id: cin-mir-4136
hairpin:
         c   aca     caa 
uaaacauug aua   uaguu   c
||||||||| |||   |||||   a
AUUUGUAGC UAU   GUCAg   u
         A   GAA     cac 


mirna_id: cin-mir-4137
hairpin:
uuguuaaauua  auuaa    -     aa     a 
           cu     uaug aauua  gcuua a
           ||     |||| |||||  |||||  
           GG     AUAC UUAAU  UGGgu u
----------G  ----G    G     GG     u 


mirna_id: cin-mir-4138
hairpin:
UA       ---AGA      A    u 
  GAUGAAG      GUAAUG uuca u
  |||||||      |||||| |||| g
  uuacuuc      uauuac aggu c
aa       aaacac      a    u 


mirna_id: cin-mir-4139
hairpin:
C        A    U     a  aua 
 ACUGAAAC UAGA CACUU aa   u
 |||||||| |||| ||||| ||    
 UGGCUUUG AUUU GUGAA uu   u
-        C    -     A  caa 


mirna_id: cin-mir-4140
hairpin:
A         UCC  C    cu  ua 
 CGUCGUCGU   CA CUGG  au  a
 |||||||||   || ||||  ||   
 GCAGCAGUA   GU GACC  ua  c
-         UUA  A    Ac  uu 


mirna_id: cin-mir-4141
hairpin:
U     -   C  U    A    a  a 
 GGUCA CAG UG UUGC Cauu ug u
 ||||| ||| || |||| |||| ||  
 CCAGU GUC GC AACG GUaa ac a
G     C   C  U    -    c  u 


mirna_id: cin-mir-4142
hairpin:
UAGC   U        AUA        - a au    cu 
    AGC CAUCUGGU   Aaaagacg c g  guuu  u
    ||| ||||||||   |||||||| | |  ||||   
    UCG GUAGACCA   UUUUuugu g c  uaaa  u
-CCA   U        GAC        a a cu    aa 


mirna_id: cin-mir-4143
hairpin:
-       U    AA UG    a  u 
 CAUGUUU GUGU  U  UGUu uu a
 ||||||| ||||  |  |||| ||  
 GUACAAA CACA  A  ACaa ag u
U       C    AA GU    a  a 


mirna_id: cin-mir-4144
hairpin:
UUCG    A   UCG           --c    guguac 
    UCUG CAU   GCAAGacuuca   cagg      c
    |||| |||   |||||||||||   ||||      a
    AGAC GUG   CGUUCUGAAgu   gucc      g
----    G   CUA           aau    aauuug 


mirna_id: cin-mir-4145
hairpin:
ug    -  ug   -a   g   g  aauga     u 
  acgu ag  guu  guu aau ug     guuau c
  |||| ||  |||  ||| ||| ||     ||||| u
  UGUA UU  UAA  UAA uug gc     uagug g
GG    G  GU   GG   g   g  ---gg     a 


mirna_id: cin-mir-4146
hairpin:
--   a          u   g  ggc   a 
  cuu uuggcaagaa uuu cu   caa g
  ||| |||||||||| ||| ||   |||  
  GAG GACCGUUCUU AAA ga   guu u
GA   -          U   A  auu   u 


mirna_id: cin-mir-4147
hairpin:
     c aa     g ua   gagau 
agcaa c  guaga a  auu     u
||||| |  ||||| |  |||     a
UCGUU G  CGUCU U  UAa     a
     U AA     G GC   aaaua 


mirna_id: cin-mir-4148
hairpin:
GG      GUCU   C    cau  u 
  AGUCGU    GGA AGCu   gg a
  ||||||    ||| ||||   || a
  uuagca    ccu uuga   cc a
ca      aacu   a    -au  a 


mirna_id: cin-mir-4149
hairpin:
UA      GU    -------     -  ua     accg  g 
  AUCUUU  UGAU       GGAAA Ag  gaacc    uc c
  ||||||  ||||       ||||| ||  |||||    ||  
  uggaag  acug       ccuuu uu  uuugg    ag g
-a      ac    cauuguu     a  gc     ----  a 


mirna_id: cin-mir-4150
hairpin:
AUA C            G    aa     -  a c      u 
   G UACUGUGAGUGU Aaag  aucuu cu g uuuugu u
   | |||||||||||| ||||  ||||| || | ||||||  
   c augauacucaca uuuc  uagaa ga c aaaaua u
aua -            a    ac     u  - u      u 


mirna_id: cin-mir-4151
hairpin:
--GUG                   u 
     AUAAUAUGAUGUCAUAAug u
     ||||||||||||||||||| c
     UAUUAUACUGUAGUGUUac u
UUGUA                   a 


mirna_id: cin-mir-4152
hairpin:
A    ---U   U  U UA    -ga   ac    g   gaua g 
 GAUG    AGU GG G  AAgu   cgu  guuu aau    g a
 ||||    ||| || |  ||||   |||  |||| |||    |  
 cuau    ucg cc c  uuca   gcg  caaa uua    c a
c    uuau   u  - --    aug   ca    g   ---g a 


mirna_id: cin-mir-4153
hairpin:
     c    uc     gcg     u aua 
gacgu acua  cgcgg   uuucg g   u
||||| ||||  |||||   ||||| |   a
CUGCA UGGU  GCGCU   aaagc c   c
     U    UU     --A     u aua 


mirna_id: cin-mir-4154
hairpin:
gacug    -u    uu     -      uaua   --      c 
     acga  gcca  uaagc gaaaua    ucu  uuaaua a
     ||||  ||||  ||||| ||||||    |||  ||||||  
     UGCU  UGGU  GUUUg uuuuau    agg  gguuau a
--CGA    UU    -U     a      -uuc   uu      c 


mirna_id: cin-mir-4155
hairpin:
-CAU      -     -UU    Ua  a 
    UUUUUG UUCUG   AUAG  uu c
    |||||| |||||   ||||  ||  
    AAAAAC GAGAC   UAUc  ag u
UGAU      U     UCU    cc  u 


mirna_id: cin-mir-4156
hairpin:
A                      caccac    aca 
 GGUAAGGUCCUACAGCGUggua      gguc   a
 ||||||||||||||||||||||      ||||   a
 CCAUUUCAGGAUGUCGUACUau      ccag   u
-                      uacccu    cuu 


mirna_id: cin-mir-4157
hairpin:
U      AU   A UAU       cau 
 GGUAAG  GCG G   GGUgcuu   a
 ||||||  ||| |   |||||||    
 ccauuc  cgc c   ucacgaa   a
g      --   c --u       cua 


mirna_id: cin-mir-4158
hairpin:
U  CC A  A      -     U   --u   u    --    c    auauguggaguucauu 
 GC  G UG UGUUAU UGUUU gca   gua uaac  uuaa gcag                u
 ||  | || |||||| ||||| |||   ||| ||||  |||| ||||                 
 cg  c ac acaaua acaaa cgu   cgu guug  aauu uguc                c
c  au -  -      u     -   uuu   u    ua    u    aauuacgggagucaca 


mirna_id: cin-mir-4159
hairpin:
----             -cguaaua      u 
    caguuuuacacau        uuuuug a
    |||||||||||||        |||||| u
    GUUAAAGUGUGUA        aaaaac u
GAUG             AUUuaaaa      u 


mirna_id: cin-mir-4160
hairpin:
u    -a  gaa     aa g 
 uaug  ug   ugauc  c a
 ||||  ||   |||||  | a
 GUAC  AC   GUUAG  G u
G    AA  AAA     AA g 


mirna_id: cin-mir-4162
hairpin:
---         CU     CUUGA    u 
   CUGUUGAUU  CUUUU     UUgu a
   |||||||||  |||||     ||||  
   GACAACUAA  GAAGA     Aacg u
AAC         UG     -----    u 


mirna_id: cin-mir-4163
hairpin:
U              -   A uu  g 
 GUAUAUUACAGAGG GGG U  cc u
 |||||||||||||| ||| |  || u
 CAUAUGAUGUCUCC CCC a  gg u
A              A   A uu  a 


mirna_id: cin-mir-4164
hairpin:
     -a     uuua   uu    g 
acggu  auaua    aaa  ugaa c
|||||  |||||    |||  ||||  
UGUCG  UGUAU    UUU  auuu a
     AC     --UG   CU    u 


mirna_id: cin-mir-4165
hairpin:
u       ccac      a    cau 
 gucccau    ccuacu uaug   a
 |||||||    |||||| ||||    
 CAGGGUA    GGGUGA GUac   u
A       AAAC      -    aca 


mirna_id: cin-mir-4166
hairpin:
---------------U         ----        ----Ag     a 
                GGGAAAAUA    UUAAAUGG      uuaua a
                |||||||||    ||||||||      |||||  
                uccuuuuau    gauuuacu      agugu u
acuuuaaaaaguaauu         uuua        aaugaa     u 


mirna_id: cin-mir-4167
hairpin:
U    A  G       ---CC    aaaua 
 UAGU GA UGGAAUG     aagc     u
 |||| || |||||||     ||||      
 guca cu acuuuau     uucg     u
u    -  -       auaac    caacu 


mirna_id: cin-mir-4168
hairpin:
     -    gaaaug    aaua   ggaaaagaaccc 
acugg uuaa      cguc    gcu            a
||||| ||||      ||||    |||             
UGAUU AGUU      GCAG    Uga            u
     U    ----AA    ---G   aagaaauuguuc 


mirna_id: cin-mir-4169
hairpin:
   --c    -  ---      gu 
ccu   cgcu gu   uucacu  g
|||   |||| ||   ||||||   
GGA   GCGA CA   GAGuga  g
   AAA    G  CGC      ag 


mirna_id: cin-mir-4170
hairpin:
-  -GA UU      -   C  a 
 UG   A  GGUGAU UGG UG u
 ||   |  |||||| ||| || a
 ac   u  ccauug acc gc a
g  aug uu      u   a  a 


mirna_id: cin-mir-4171
hairpin:
U      --          CCA 
 GACUCU  CUUAAGGAAG   g
 ||||||  ||||||||||    
 cugaga  ggauucuuuu   g
a      cu          uca 


mirna_id: cin-mir-4172
hairpin:
--       a  u      c  u   a 
  aaguaua ug cauaau au gug u
  ||||||| || |||||| || |||  
  UUUAUAU AC GUAUUA ua uac g
GA       -  U      U  u   u 


mirna_id: cin-mir-4173
hairpin:
AU         C   - -C       -----     aa 
  UUCGUCUGC AAC C  GCAagag     ucauu  c
  ||||||||| ||| |  |||||||     |||||   
  AAGCAGACG UUG G  CGUucuu     aguaa  g
--         C   A AA       cuuug     au 


mirna_id: cin-mir-4174
hairpin:
----  c          aa   aug 
    cu gcaaaaauuu  acu   u
    || ||||||||||  |||    
    GG CGUUUUUAAA  Uga   u
AAAA  C          -C   gcu 


mirna_id: cin-mir-4175
hairpin:
-     c    ug  g   g  g 
 uacca ugga  gc aua ua g
 ||||| ||||  || ||| || u
 AUGGU GCCU  CG UGU Gu g
G     A    --  A   G  a 


mirna_id: cin-mir-4176
hairpin:
UCC      --UUCUUU      accuuu         -   uu 
   AGAAAU        UAAGUa      uauauucaa aag  u
   ||||||        ||||||      ||||||||| |||   
   ucuuua        auucau      auauagguu uuu  u
---      uuuuuuuu      --guac         c   uu 


mirna_id: cin-mir-4177
hairpin:
                     aaucgaaa    c u    aac 
UAUUUUUAAAACAGCAAUUAa        ccca u uuaa   a
|||||||||||||||||||||        |||| | ||||    
AUAAAAAUUUUGUCGUUAAUu        gggu a aauu   g
                     -------g    u c    aac 


mirna_id: cin-mir-4178a
hairpin:
U      -UUGA       -UU    uuau 
 GCAAAC     UCAGGUU   agca    c
 ||||||     |||||||   ||||     
 cguuug     gguucaa   ucgu    a
a      cccaa       ucu    ugcu 


mirna_id: cin-mir-4178b
hairpin:
A       -UUGA       -UU    uuac 
 UGCAAAC     UCAGGUU   Agca    a
 |||||||     |||||||   ||||     
 acguuug     gguucaa   ucgu    a
a       cccaa       uuu    uguu 


mirna_id: cin-mir-4179a
hairpin:
CA   C    G          auacu   uuuc 
  GCU AUCU GUAUAAAaac     gua    c
  ||| |||| ||||||||||     |||     
  CGA UAGA CAUAUUUUug     cau    g
-C   U    A          --cau   uaca 


mirna_id: cin-mir-4180
hairpin:
U         CC     C        ----   a         u 
 CUGCCAUAC  UGAGA UUUaucau    ggu ugauguugg u
 |||||||||  ||||| ||||||||    ||| |||||||||  
 GACGGUAUG  AUUCU AGauggug    uca auuauaauc a
-         UC     A        guca   c         u 


mirna_id: cin-mir-4181
hairpin:
              U          
AUUGUGUCAGCCUG CGUUCUaga 
|||||||||||||| |||||||| a
UAACACAGUCGGAC GCAAGauua 
              U          


mirna_id: cin-mir-4182
hairpin:
   AA  G         -       cc 
CAU  UG AGGUUUUUU ACUagug  a
|||  || ||||||||| |||||||  a
GUA  AC UCUAAAAAA Uggucau  a
   AG  G         C       aa 


mirna_id: cin-mir-4183
hairpin:
AG    AAG      - -   ---U  u         -  aa 
  CGGG   GAGUGG C CGG    ga auaacagag au  u
  ||||   |||||| | |||    || ||||||||| ||  a
  GCCC   UUCGCU G GCC    cu uauuguuuc ug  c
CG    -GU      A U   UAuu  -         a  ga 


mirna_id: cin-mir-4184
hairpin:
--------uugauuaa   ---     aa      a   cu 
                guc   gcgau  uaucgg aca  u
                |||   |||||  |||||| |||   
                UAg   ugcua  gugguc ugu  g
AAUAAGGUAGAAUUUA   gua     gg      c   ac 


mirna_id: cin-mir-4005c
hairpin:
-U          -G UU     --a     
  GAGUUGGUAU  U  CUGGU   guac 
  ||||||||||  |  |||||   ||| u
  uucgaccaug  g  gauca   caug 
ac          aa gg     cug     


mirna_id: cin-mir-4185
hairpin:
-----   -     A   UA    cug      -   ua 
     CAG CGGUG UGA  AUAC   gacgug auu  u
     ||| ||||| |||  ||||   |||||| |||   
     GUC GUCAU ACU  UAUG   Uuguac uag  a
GUCGA   U     -   --    ---      g   ua 


mirna_id: cin-mir-4186
hairpin:
C     G       A U          aca    u 
 UAGAU AGGCAAG G GAGuguuauu   aaag g
 ||||| ||||||| | ||||||||||   ||||  
 aucua ucuguuc c cucacaauaa   uuuc g
a     a       a c          --a    u 


mirna_id: cin-mir-4187
hairpin:
UUU       -   --       -     --------a   g  a    auu 
   GGUGUUG UGC  UGUGCAA cuuau         uca ga cauu   u
   ||||||| |||  ||||||| |||||         ||| || ||||    
   ccauaau aug  acauguu gaaua         agu uu guga   a
auu       u   uu       a     augacauaa   g  a    aau 


mirna_id: cin-mir-4188
hairpin:
UCA        UU     ca     c   cuu 
   AAUGCAAU  UUAUA  uuugc aac   a
   ||||||||  |||||  ||||| |||   u
   uuauguug  aauau  agaug uug   a
aaa        --     uc     -   uac 


mirna_id: cin-mir-4189
hairpin:
AC UG     U      AC  uuaccu     ugu  uu 
  G  CGUGG AGUUUA  CU      uacgu   ag  u
  |  ||||| ||||||  ||      |||||   ||   
  c  gcacc ucgaau  ga      gugcg   uc  g
ua gu     -      gu  ugcugu     -uu  ca 


mirna_id: cin-mir-4190
hairpin:
       U  AUA  UA        ug a 
AUAUGAG UU   UU  CAuauaca  u u
||||||| ||   ||  ||||||||  |  
uauauuu ag   aa  guaugugu  g a
       u  -ga  gg        gu u 


mirna_id: cin-mir-4191
hairpin:
AG    A   U  U         uuga    a 
  GUUU UGA CG AACAAUagg    guua a
  |||| ||| || |||||||||    |||| a
  caaa acu gc uuguuauuu    caau u
ca    c   u  -         uaag    u 


mirna_id: cin-mir-4192
hairpin:
uauaaa    uu       --    uu 
      aauc  uuuuuua  auau  a
      ||||  |||||||  ||||  u
      UUGG  AAAAGGU  Ugua  u
----AA    UU       AC    cg 


mirna_id: cin-mir-4193
hairpin:
--------------------AU    A   AG     UUa  a 
                      GUUU ACA  UGUCU   ug u
                      |||| |||  |||||   ||  
                      cgaa ugu  acgga   ac g
uaucuguucgauugagaacacg    c   aa     --c  u 


mirna_id: cin-mir-4194
hairpin:
UG   UAAA         a    agc 
  ACG    ACGUGUGUG cgca   c
  |||    ||||||||| ||||    
  UGU    UGUAUAUAU GUgu   a
GG   ---G         G    gug 


mirna_id: cin-mir-4195
hairpin:
--    -cu      c      uacaau     
  guca   uauuau uguaua      agcc 
  ||||   |||||| ||||||      ||| u
  CGGU   AUAAUG ACAUau      ucga 
UU    UAC      U      ------     


mirna_id: cin-mir-4196
hairpin:
    C    CA    ACA          aca 
ACUC AAAA  GAGC   GCGggacuac   u
|||| ||||  ||||   ||||||||||    
ugag uuuu  cuug   cgcccugaug   g
    c    uc    ggg          cuc 


mirna_id: cin-mir-4197
hairpin:
C   -  U A        -A   uua 
 ACG GU C GCUGCAUC  GGc   c
 ||| || | ||||||||  |||    
 ugc cg g cgacguag  ccg   c
-   u  u c        gc   caa 


mirna_id: cin-mir-4198
hairpin:
AAU           AA    aucugacauau 
   GAUGUUAUUUU  UGaa           a
   |||||||||||  ||||           u
   uuacgauaaag  acuu           u
ugu           gg    cguuuucccau 


mirna_id: cin-mir-4199
hairpin:
cuuuc        ---          c 
     guuuuuuu   uucgaucgag g
     ||||||||   |||||||||| g
     CGGAAAAG   AAGUuagcuu c
CAAAC        CUU          a 


mirna_id: cin-mir-4200
hairpin:
-        UG          a    c 
 CACUAAAA  AGGGACAGAG gaaa u
 ||||||||  |||||||||| ||||  
 GUGAUUUU  UCCCUGUCUC cuuu a
C        CA          C    u 


mirna_id: cin-mir-4201
hairpin:
GGCA   A     --GGG UG  auau 
    UUG UAUGU     U  Ga    g
    ||| |||||     |  ||    u
    aac augcg     g  cu    g
-cca   a     aagaa gu  aaga 


mirna_id: cin-mir-4202
hairpin:
U   -U      ---UUUC      -    u  ----u        aau 
 GUG  GUUUCA       GUUGcu uaau ag     ugcaaaau   c
 |||  ||||||       |||||| |||| ||     ||||||||    
 cau  uaaagu       cgacga guug uc     auguuuug   a
a   uu      cguuuuu      u    u  cuacu        auu 


mirna_id: cin-mir-4203
hairpin:
uu    u    c    gug   cuu      u 
  uaag ucua agca   guu   aaacuu c
  |||| |||| ||||   |||   ||||||  
  GUUC AGGU UCGU   CAA   uuuggg u
-G    U    -    -AA   -AU      g 


mirna_id: cin-mir-4204
hairpin:
---         U         -A   u 
   UAAAUAUAA GUCAUUUAU  CAU a
   ||||||||| |||||||||  ||| u
   AUUUAUAUU UAGUAAAUa  gua u
GAC         -         ac   u 


mirna_id: cin-mir-4205
hairpin:
   UU    UG    -  Aaau 
CGG  UAAU  GAUG GA    a
|||  ||||  |||| ||    u
gcc  guug  cugc cu    g
   cu    gu    u  gcga 


mirna_id: cin-mir-4206
hairpin:
---c        cgca       -      uuu 
    cuaggcua    uuuaaug aguaaa   a
    ||||||||    ||||||| ||||||    
    GAUUUGAU    AAGUUAu ucauuu   u
GAGU        ----       a      ucu 


mirna_id: cin-mir-4207
hairpin:
   ca    ag   cuuaa  u   g 
cgu  uaau  caa     ca caa a
|||  ||||  |||     || |||  
GCG  AUUA  GUU     Gu guu a
   AC    GG   -UACG  -   c 


mirna_id: cin-mir-4208
hairpin:
----uuu         g  c    -c    g     u 
       aaauaacau au uuug  uauc uuuuu a
       ||||||||| || ||||  |||| |||||  
       UUUAUUGUA Ua aaau  auag aaaaa a
UUUGGAU         G  a    aa    -     a 


mirna_id: cin-mir-4209
hairpin:
          UA  U   U   ---u  u   u 
UAAUGAUUAG  UG GGC Uuu    ua auc a
||||||||||  || ||| |||    || ||| g
guuauuaauu  ac ccg aaa    au uag c
          ua  c   u   uuuu  u   c 


mirna_id: cin-mir-4210
hairpin:
U   U               c  a 
 UUA AGAAUAUGUAUGUAA uu c
 ||| ||||||||||||||| ||  
 agu ucuuauacauacauu aa a
a   u               c  u 


mirna_id: cin-mir-4211
hairpin:
A  GA        ---CUUC         aa 
 CA  AAAGAUUG       Gcaguaagu  a
 ||  ||||||||       |||||||||  u
 gu  uuucuaau       cguuauuca  a
g  -a        uuuuuuu         au 


mirna_id: cin-mir-4212
hairpin:
u cu    a     uua     gu     c 
 g  auga ucguu   aguuu  uuaaa c
 |  |||| |||||   |||||  ||||| u
 C  UGCU AGUAA   UCGAa  aauuu u
A UU    A     ---     au     a 


mirna_id: cin-mir-4213
hairpin:
         AAC   UU   c 
AAUAUUUUU   GAU  UCu u
|||||||||   |||  ||| u
uugugaaga   cua  gga u
         -aa   -c   c 


mirna_id: cin-mir-4214
hairpin:
      AA    ---            u  -------------    a 
UAUGUG  AGUA   AUGGUGccgcgu gu             acag a
||||||  ||||   |||||||||||| ||             |||| a
gugcgc  ucgu   uaccauggcgua ca             uguc a
      -a    cca            -  agaaagaacauuu    c 


mirna_id: cin-mir-4215
hairpin:
         ---        aaugu 
acaaucaua   uacauuaa     u
|||||||||   ||||||||     a
UGUUAGUAU   AUGUAAUU     u
         AUU        aaaau 


mirna_id: cin-mir-4216
hairpin:
         CU A         ---a    ug     cuucuu 
AAGCUCUUC  C AAAUUUauu    gugc  auaua      a
|||||||||  | |||||||||    ||||  |||||      u
UUCGAGAAG  G UUUAAAUaa    caug  uguau      c
         AU G         aaaa    gu     aauaaa 


mirna_id: cin-mir-4217
hairpin:
       --     --auacug    u  ua 
aauagga  auaaa        uauc gu  c
|||||||  |||||        |||| ||  u
UUGUCCU  UGUUU        augg cg  u
       AA     CUAAUcaa    u  uc 


mirna_id: cin-mir-4218
hairpin:
--AAGA       AAAAG      u 
      UUUUAUA     GUGucu g
      |||||||     ||||||  
      agaauau     cacagg a
uuuuga       --gga      u 


mirna_id: cin-mir-4219
hairpin:
C   - -       GA    Au       -u      a 
 AUG C UGAUUGU  CGUA  aaguguu  aaacaa g
 ||| | |||||||  ||||  |||||||  |||||| c
 uac g auuaacg  gcgu  uuuacaa  uuuguu u
c   a u       --    gu       cc      u 


mirna_id: cin-let-7f
hairpin:
-U     A     UUC       -   g   guuaa 
  GAGGU GUGGA   UGUaguu uuu cuc     a
  ||||| |||||   ||||||| ||| |||     u
  CUCUA CACCU   ACGUCaa gga gag     g
UG     C     UAC       u   g   accga 


mirna_id: aly-MIR395i
hairpin:
-----c  aa                    u            - ucc 
      uc  gaguuccuccgaacacuuca ugaaaaaagguu c   a
      ||  |||||||||||||||||||| |||||||||||| |   u
      ag  CUCAAGGAGGUUUGUGAAGU auuuuuuuuuaa g   u
uauagu  ac                    C            u cuu 


mirna_id: aly-MIR399j
hairpin:
--aaa    -    u c     a     a       a          ac      uu  c uu     cu 
     ggug aaaa g auuac gggca gaucucu uuggcaggaa  cauuac  ga c  ugcau  c
     |||| |||| | ||||| ||||| ||||||| ||||||||||  ||||||  || |  |||||   
     ucgc uuuu c uaauG CCCGU UUAGAGG AACCGUucuu  gugaug  uu g  acgua  u
uauaa    g    - u     G     -       A          ga      -u  c uu     uu 


mirna_id: aly-MIR841
hairpin:
g      c  u        c   a   a              c               CU       A  a            ---  -  a  ag    ---a     c 
 caccaa uc accaugug aga acu uggucuugaguugc ugugaaUACGACCCA  GGAAACU AA uaaacaaagaaa   ca gu uc  ugug    aauuu a
 |||||| || |||||||| ||| ||| |||||||||||||| |||||||||||||||  ||||||| || ||||||||||||   || || ||  ||||    |||||  
 gugguu ag ugguacac ucu uga accaggacucaacg acacuuaugcugggu  uuuuuga uu auuuguuucuuu   gu ca ag  acau    uuaaa u
-      c  c        a   a   g              u               ag       c  c            aaa  a  g  aa    gaga     a 


mirna_id: aly-MIR1887
hairpin:
u     A        G U           u 
 uguuC CUUAGAUU U CUUAGUAUGAG u
 ||||| |||||||| | ||||||||||| g
 acaag gaaucuga a gaaucaugcuc u
a     a        g u           u 


mirna_id: aly-MIR4221
hairpin:
---cua    a    u     g     -                 c       u    ugau   uaaug  ua   u 
      guau ccag uaaca uuuuc cugcuuuugaauucuug acuagcu ccau    aga     gu  cau u
      |||| |||| ||||| ||||| ||||||||||||||||| ||||||| ||||    |||     ||  |||  
      caua gguu auugu AGAAG GAUGAAAACUUGAGAAc ugaucga ggug    ucu     cg  gug u
auauac    -    u     -     U                 a       u    ---u   --caa  uc   g 


mirna_id: aly-MIR4222
hairpin:
--acc    cu u     aa           c    -        a  a      c       -ugauau    a     u  u 
     aucc  a guuga  gcgguaacaau ucga ugaaagag gg uguaga gcucaac       agga gcaau gu u
     ||||  | |||||  ||||||||||| |||| |||||||| || |||||| |||||||       |||| ||||| ||  
     uagg  u cgacu  CGCCAUUGUUA AGCU ACUUUcuc cc auaucu cgaguug       uccu cguua ua u
cuuua    uu c     cc           A    U        a  c      a       uuccacu    a     u  g 


mirna_id: aly-MIR4223
hairpin:
---gcu    gc          u                  A       u        cagccguuuucuggug 
      ucuu  uuugcuugac AUGGAAUUUGAUAAAUAA CACaaaa auuaaacg                g
      ||||  |||||||||| |||||||||||||||||| ||||||| ||||||||                g
      agaa  aaacgaacug uaccuuaaacuauuuauu guguuuu uaauuugc                c
uccaac    -a          u                  -       -        uuuuucccuuugaaac 


mirna_id: aly-MIR4224
hairpin:
-aa         ucg -            a   a     cua        aa      uaucugu    cga 
   agguuuuuu   g gacagagaugag aag cucag   uuuguuga  augaaa       gaag   a
   |||||||||   | |||||||||||| ||| |||||   ||||||||  ||||||       ||||    
   ucuagagaa   c cugUCUCUACUC UUC GAGUC   aaacaacu  uauuuu       uuuc   a
gua         uaa a            C   -     AAC        --      -----uu    caa 


mirna_id: aly-MIR4225
hairpin:
--ac      a         ua          -     C         u  -c      uu   gc    auc  uu 
    caaauc uguuuauuu  GAAUCGAUGG UUAAA AACACauuu ga  gacaaa  uug  gacu   ag  a
    |||||| |||||||||  |||||||||| ||||| ||||||||| ||  ||||||  |||  ||||   ||   
    guuuag acaaauaaa  cuuagcuacu aauuu uuguguaaa cu  cuguuu  agu  uuga   uu  u
acca      a         uc          u     c         -  ca      uu   -a    gcu  ua 


mirna_id: aly-MIR4226
hairpin:
--aagcaaugaaua            A    C  U                   caugcccucguggcuuuguucuuccaacc 
              guacauugUACA GAUG AU CGAGCAAUAaaugaguuug                             a
              |||||||||||| |||| || |||||||||||||||||||                             u
              cauguaacaugu uugc ua gcucguuauuuacucaaac                             u
agaguuaacucaaa            -    u  c                   ccacucccauagucuacuacuguuuguuu 


mirna_id: aly-MIR4227
hairpin:
--guucacac    a           U           U    a        a  -   gu 
          gaca cacaauuUCAU UGUGCCAAUCA UCUA caaaguau cc ucg  c
          |||| ||||||||||| ||||||||||| |||| |||||||| || |||  u
          uugu guguuaaagua acaugguuagu aggu guuucaua gg agu  c
augacggcua    a           c           u    c        c  u   ga 


mirna_id: aly-MIR4228
hairpin:
---------     uguuguuuua    ---               UG         cg     aacaaucacacgcgcacacuuccac 
         cggcg          accu   aAAAGCCUUGAACGC  UCGUUucgc  ucgac                         c
         |||||          ||||   |||||||||||||||  |||||||||  |||||                         a
         gucgu          ugga   uuuucgggacuugug  ggcaaagcg  ggcug                         u
uuauuuuag     ----------    auu               gu         ua     cuuggacacaccaccuaucuacuau 


mirna_id: aly-MIR4229
hairpin:
---ac          c   a             G   C                   aggacguuuugcacgu 
     auaaaucguc uaa accUUGGCAGGGA GUC UCCACACacaauauuuaca                u
     |||||||||| ||| ||||||||||||| ||| |||||||||||||||||||                 
     uauuuaguag auu uggaacuguuucu cag agguguguguuauaagugu                g
aauua          -   g             a   -                   aguuaaaguuucuuac 


mirna_id: aly-MIR4230
hairpin:
--aa            cuc   U     G   A              u     -uau  g 
    uuauuauuauac   uca GUCUC GAA UUUGCACCCUguga uaaua    ug a
    ||||||||||||   ||| ||||| ||| |||||||||||||| |||||    ||  
    aauaauaaugug   agu cagag uuu aaacgugggacacu guuau    ac a
auaa            uaa   u     a   c              c     uuuu  u 


mirna_id: aly-MIR4231
hairpin:
---      g   ua     a          UG           u          cgcuu 
   aaucag uca  aaggc guUAGACCUU  UGUUGCCAUCG ucuuggcgcu     c
   |||||| |||  ||||| ||||||||||  ||||||||||| ||||||||||      
   uuaguc agu  uuccg caauuuggag  acaacgguagc agaaccgcga     a
uuu      g   -c     c          ga           c          aaacc 


mirna_id: aly-MIR3444b
hairpin:
--uugaauccaaauuccaaac                    c      c  ca    aa    aa 
                     uauugggagauugaugagau gaccga ac  aauc  gauc  u
                     |||||||||||||||||||| |||||| ||  ||||  ||||   
                     AUAACCCUCUAACUACUCUA cuggcu ug  uuag  uuag  g
cuuuuaaagccaaauccaagC                    -      u  cc    ca    aa 


mirna_id: aly-MIR4232
hairpin:
---u        a   aaau   u ug   a     -    c      acuucauucaauaccaagaaaaaggac 
    uucauuuu caa    agc a  uau ccugg gggu ugaauc                           c
    |||||||| |||    ||| |  ||| ||||| |||| ||||||                            
    gaguaaaa guu    uCG U  GUA GGAUU UUUA ACUuag                           g
gagu        -   acgc   - GU   -     A    C      uuggccaaaccuauugcuauacaauug 


mirna_id: aly-MIR4233
hairpin:
----        u     au             g      ug          c      auuggauccauggcuauauggauua 
    gacaaaug aagau  uuggaguugaugu ggugau  guauguggug ugaaca                         u
    |||||||| |||||  ||||||||||||| ||||||  |||||||||| ||||||                          
    cuguuugu uucua  aaCCUCAACUACA CUACUA  Cauacacuac auuugu                         u
uuuc        u     --             A      CA          a      aaugucuaaugugaaauaaugccau 


mirna_id: aly-MIR4234
hairpin:
uu      --uuu    --cuc           gg            a            c    caaa   a 
  augagg     ucua     auugucaacug  uuuaaguuggaa uucaugauuucu auau    gcu g
  ||||||     ||||     |||||||||||  |||||||||||| |||||||||||| ||||    ||| g
  uacucu     aggu     UAACGGUUGAC  AAAUUCAACcuu agguauuaaaga uaua    ugg u
--      uuauc    uuuuu           UA            c            u    -acc   u 


mirna_id: aly-MIR4235
hairpin:
---cugu     gugu     cu        u                      ---ag   a a        a 
       aguau    gauuu  ggguugua uguuuucaguuccuguucugua     uga u ugaccaau c
       |||||    |||||  |||||||| ||||||||||||||||||||||     ||| | ||||||||  
       ucaug    cuaga  CCCAACAU ACAAAAGUCAaggacaagacau     acu a auugguug u
ucauuuu     -guu     UC        C                      gucga   c c        u 


mirna_id: aly-MIR4236
hairpin:
----auaaaa     aauc           a                       --------   a gg     --   -  c 
          ucgca    uguuaggaggg aacaaauuaaugucuuauaggac        gca g  cacca  aua cu u
          |||||    ||||||||||| |||||||||||||||||||||||        ||| |  |||||  ||| ||  
          ggugu    guaAUCCUCCC UUGUUUAAUUACggaauauucug        cgu c  guggu  uau ga u
cuaaucuuaa     --ac           C                       gaaccuau   - -a     gu   c  a 


mirna_id: aly-MIR4237
hairpin:
--aaagacu   c            --                          aacau    ua 
         guu uaugacaucgau  uauauguuuacguuuguuuuuacguu     guaa  a
         ||| ||||||||||||  ||||||||||||||||||||||||||     ||||  u
         caa auacuguAGCUA  AUAUACAAAUGCAAAcaaaaaugcaa     cguu  a
cauuuauau   a            AU                          -auau    ug 


mirna_id: aly-MIR4238
hairpin:
---uuucaa    gau                           -u        aa      c 
         gagu   uugguuugggguuuuaauuugcaaaaa  uugaaguc  ugugug u
         ||||   |||||||||||||||||||||||||||  ||||||||  |||||| a
         cuua   gaccaAACCCCAAAAUUAAACGUUUUU  aacuucag  auacgc u
guacuaauc    -au                           uu        aa      u 


mirna_id: aly-MIR4239
hairpin:
--uc         ca             A   C  C        ua    --u       ca 
    uuguuugca  cuuuguuUCCGUU UUU CG AUGCUCCu  gaaa   uuuugug  u
    |||||||||  ||||||||||||| ||| || ||||||||  ||||   |||||||   
    aauaaacgu  ggaacaaagguaa aaa gc uacgagga  cuuu   aaaauau  c
ucaa         aa             c   c  a        ua    ccu       ag 


mirna_id: aly-MIR4240
hairpin:
--uu     a c          A   C       A         -      u  u     a  au     cug        ugau ug g          aagag 
    uucgu g cgugaaguua UGG UAGAGUG CUAGACCCG uaacau gc augaa uc  uugaa   aaauuugu    c  c guuuauuuuc     a
    ||||| | |||||||||| ||| ||||||| ||||||||| |||||| || ||||| ||  |||||   ||||||||    |  | ||||||||||     u
    gagca c gcacuuuagu acc aucucac gaucugggc auugua cg uauuu ag  gauuu   uuugaaca    g  g ugaauagaag     c
cucc     c a          c   u       -         u      u  c     a  -c     -ca        ---c gu g          caaaa 


mirna_id: aly-MIR4241
hairpin:
--gaac                 a         -       a  ga    guucauaaacauucgcucuauggcccaugauaauguugagucu 
      gaacuaaaccucauucg uguaagaaa ucccaaa ag  cagg                                           g
      ||||||||||||||||| ||||||||| ||||||| ||  ||||                                            
      cuugauuuggaguaAGC ACAUUCUUU AGGGUUU uc  gucc                                           c
cucuac                 G         U       C  ug    acacauaaccgcacuagacgggcuguuuuuacauucagugcau 


mirna_id: aly-MIR4242
hairpin:
---c    a   uc      u           u            caagcagugucugaugggcugcugauauuuuucucuuccuauuacc 
    ccaa ucc  agaacu gggaaugcuau guuaacuuuucu                                              c
    |||| |||  |||||| ||||||||||| ||||||||||||                                              u
    gguu agg  ucuuga CCCUUACGGUA CAAUUGAAAaga                                              g
cgaa    a   -u      u           U            ucucaaagacauuguguguagaaagguuuacguuacguuguaaggu 


mirna_id: aly-MIR4243
hairpin:
uua        -----     c    G     A                  acaauu      agucucacucucaagauuuugugguuguug 
   agaaccau     gauua aguU AAAUU UAGAUUUCGUACAugaca      ugcucu                              u
   ||||||||     ||||| |||| ||||| ||||||||||||||||||      ||||||                              u
   ucuuggua     uuaau ucaa uuuaa aucuaaagcauguacugu      acgaga                              g
---        gguaa     c    a     c                  --acgu      guauaaacuguacauaagagagcuuaugac 


mirna_id: aly-MIR4244
hairpin:
--auuauc       g    c     U     C               gagau 
        caaaguu ucgu gUUGU GAUUC UUGGAGAUUGaauuu     a
        ||||||| |||| ||||| ||||| |||||||||||||||     u
        guuucaa agua caaca cuaag aaccucuagcuuaaa     u
uacuaguu       a    a     c     a               gcaac 


mirna_id: aly-MIR4245
hairpin:
----a  ccaauuug     -                u     a        acuu       g agaug   uuuuu    ca 
     gc        aagau gaauugucaguauaaa cuuug uccaauau    uugauua u     agu     uuga  a
     ||        ||||| |||||||||||||||| ||||| ||||||||    ||||||| |     |||     ||||   
     cg        uucua cuUAACAGUCAUAUUU GAAAC agguuaug    aacuagu a     uua     aacu  u
gaaga  ---aaaaa     g                U     A        -auu       g -gaaa   -uauu    au 


mirna_id: aly-MIR4246
hairpin:
--  a   au  a  a            AAU              c  g   uuaa 
  uc cuc  ac gc gaaaccAAAUCC   UUUCAUUGCUUAAa cu ugu    u
  || |||  || || ||||||||||||   |||||||||||||| || |||    u
  gg gag  ug cg cuuugguuuagg   aaaguaacgaauuu ga acg    u
au  c   gu  g  c            -gu              a  -   uugu 


mirna_id: aly-MIR4247
hairpin:
--       aa    u    u             U            u   u   uuuaugaacauggaa 
  aaauuau  uucc ugaa aUGUAUCCUAAUA UAGACCCCcauu agu uua               u
  |||||||  |||| |||| ||||||||||||| |||||||||||| ||| |||                
  uuuaaua  aagg acuu uacauaggauuau aucuggggguaa uca aau               u
gu       ac    u    u             u            u   u   auaacaaaggaacgu 


mirna_id: aly-MIR4248a
hairpin:
-ugug       -u               A                  cuu        ucaaaag            c a     a   uaauauauau 
     gugauau  caaaauauACAUUUU UUUUUGGCAAUCAuuuuu   uuauaaau       ucauuuuucuuu u aaaac caa          a
     |||||||  ||||||||||||||| ||||||||||||||||||   ||||||||       |||||||||||| | ||||| |||          u
     cauuaua  guuuuauauguaaaa aaaaaccguuaguaaaag   aauauuua       aguaaaaagaaa a uuuug guu          a
aaaaa       uu               g                  ---        -------            a a     a   ugcaaccaau 


mirna_id: aly-MIR4248b
hairpin:
-           -u               A                  cuu        ucaaaag            c a     a   -----uaa       a 
 uguggugauau  caaaauauACAUUUU UUUUUGGCAAUCAuuuuu   uuauaaau       ucauuuuucuuu u aaaac caa        uauauau u
 |||||||||||  ||||||||||||||| ||||||||||||||||||   ||||||||       |||||||||||| | ||||| |||        |||||||  
 auaccauuaua  guuuuauauguaaaa aaaaaccguuaguaaaag   aauauuua       aguaaaaagaaa a uuuug guu        auauaua a
a           uu               g                  ---        -------            a a     a   ugcaacca       u 


mirna_id: aly-MIR4248c
hairpin:
-ug         -ua              A                  cuu           aaaaagaaaauguauauuuuguuauaua 
   uggugauau   aaaauauACAUUUU UUUUUGGCAAUCAuuuuu   uuauaaauuca                            u
   |||||||||   |||||||||||||| ||||||||||||||||||   |||||||||||                            a
   accauuaua   uuuuauauguaaaa aaaaaccguuaguaaaag   aauauuuaagu                            a
aaa         uug              g                  ---           aaauagaaaaaauuuugaguuugcaacc 


mirna_id: aly-MIR4249
hairpin:
--uacacauuucuu    a   U     U     G       A     -----     cucuugaauuucucacacucu 
              guuc ggu GAAUU GAGAA UUGAGGU gguuu     accaa                     c
              |||| ||| ||||| ||||| ||||||| |||||     |||||                      
              caag cca cuuaa cucuu aacucca ccaaa     ugguu                     g
auuucuaaaaauuc    a   c     c     a       c     cucuu     ugagcuauucucuuugaacua 


mirna_id: aly-MIR4250
hairpin:
--c    cuu  u            -     CA                    c      aug 
   guug   ca gaucaguccUCC AAAGG  CAAGAACAUCAaauagguga accaag   u
   ||||   || |||||||||||| |||||  |||||||||||||||||||| ||||||   g
   caac   gu cuaguuaggagg uuucc  guucuuguaguuuauccacu ugguuu   u
ucc    acc  u            a     -c                    u      guu 


mirna_id: ath-MIR4221
hairpin:
uaguauauccguuucac      U  U  G              u    uu  -u    gccauauuaaguuacaugugg 
                 aguUUU CC CU UUGAAUUCUUGCac agcu  ca  augg                     g
                 |||||| || || |||||||||||||| ||||  ||  ||||                     u
                 ucaaag gg ga aauuugagaacgug ucga  gu  uacc                     g
---------------uu      u  u  a              u    uc  cu    aacgacgugacaaugccgugg 


mirna_id: ath-MIR4227
hairpin:
----     cacgacaa  c       C  G         U         u    acu     u 
    guuca        ca aauuUCA UG UACCAAUCA UCCAacaaa uaua   cgguc c
    |||||        || ||||||| || ||||||||| ||||||||| ||||   ||||| a
    uaagu        gu uuaaagu ac augguuagu agguuguuu auau   guuag g
uuuu     --uuuuaa  u       -  a         u         u    ---     g 


mirna_id: ath-MIR4228
hairpin:
---------     uguuguuuua      --UAG           GU        c       a   -ucacac   cacacuuccac 
         cggcg          accuaA     CCUUGAACGCC  CGUUucgu uccgacg cau       gcg           c
         |||||          ||||||     |||||||||||  |||||||| ||||||| |||       |||           c
         gccgu          uggauu     gggacuugugg  gcaaagcg aggcugc gug       ugc           u
ccauuuuag     ----------      uuuua           ug        u       -   cacacuc   cuaucuaccau 


mirna_id: ath-MIR3440b
hairpin:
u   --         u        g  UU       C               --        a 
 cug  guauuuugc caaguaug UU  CUUGGCC AUCCACUUCuaaugu  guuuugua c
 |||  ||||||||| |||||||| ||  ||||||| |||||||||||||||  |||||||| u
 gac  cguaaaacg guucaUGC AA  GAACUGG UAGGUgaagauuacg  uaaaacgu a
u   gg         u        G  GG       U               ug        a 


mirna_id: ath-MIR4239
hairpin:
---uc    u            c         U   C       uu    acu   ug gca 
     uugu ugcacauuuugu UUUGUUAUU UCG AUGCUCC  ugaa   uuu  u   u
     |||| |||||||||||| ||||||||| ||| |||||||  ||||   |||  |    
     aaua acguguggaaca aagcaauag ggc uacgagg  acuu   aaa  g   g
uuuca    u            a         c   a       uc    cuc   gu uag 


mirna_id: ath-MIR4240
hairpin:
--cu     a c          a   c       A         -      U  c      cau   aa      uuu      ucugaggauuauuuuucaagau 
    uucgu g caugaaguua ugg uagagUG CUAGACCCG UAACAU AC auauau   uug  cugaaa   guuugu                      a
    ||||| | |||||||||| ||| ||||||| ||||||||| |||||| || ||||||   |||  ||||||   ||||||                       
    gagca c guacuuuagu acc aucucac gaucugggc auugua ug uauaua   agc  gauuuu   caaaca                      u
cucc     c a          c   u       -         u      u  c      ---   --      uuu      cgucggugaauagaagcaaaac 


mirna_id: ath-MIR4243
hairpin:
-------------------          ----      c                    U      c   aauu     -------ga   u   -uu    ga 
                   aaagaaccgu    gaauua agUUGAAAUUGUAGAUUUCG ACauga aau    ugcuc         gca cac   ucau  u
                   ||||||||||    |||||| |||||||||||||||||||| |||||| |||    |||||         ||| |||   ||||   
                   uuucuuggua    uuuaau ucaauuuuagcaucuaaagc uguacu uua    acgag         cgu gug   ggug  u
uagggagacauuaacuuua          gguu      c                    u      -   -cau     aguuuaugc   u   ucu    uu 


mirna_id: hsa-mir-4295
hairpin:
-      -        G AAU     ----     --  --u    c 
 cuuugu ggaaCAGU C   GUUUU    CCUUg  cc   gugg a
 |||||| |||||||| |   |||||    |||||  ||   |||| a
 gagaca ccuuguca g   caaag    ggaac  gg   cacc g
a      u        - -au     aauc     uu  cuu    a 


mirna_id: hsa-mir-4296
hairpin:
--uug   uuu         U   -G        g  gaagugg 
     ggc   gAUGUGGGC CAG  CUCAgagg cu       u
     |||   ||||||||| |||  |||||||| ||       u
     cug   cuguaccug guc  gggucuuc gg       g
uuuug   ucu         u   ag        g  gaggggu 


mirna_id: hsa-mir-4297
hairpin:
-ag   g   -   -   -     U  G    -   -  u 
   cac cac gUG CCU UCCUG CU UGcc ugc cu c
   ||| ||| ||| ||| ||||| || |||| ||| ||  
   gug gug cgc ggg aggac gg acgg acg ga g
ggg   g   u   u   c     c  g    c   u  a 


mirna_id: hsa-mir-378c
hairpin:
g     ---       GGAC UG        AGAG       gg 
 gaggc   caucACU    U  GAGUCAGA    UGGaguc  g
 |||||   |||||||    |  ||||||||    |||||||   
 cuccg   guggugg    a  uucagucu    acuucag  u
-     uga       ---a gu        --ca       ac 


mirna_id: hsa-mir-4293
hairpin:
--agagacac        u gg a       -acau  cu 
          cuguuccu g  a gcuggug     ug  a
          |||||||| |  | |||||||     ||   
          GACAAGGA C  U CGACcac     ac  a
aagucagucc        - AG C       acuuu  uu 


mirna_id: hsa-mir-4294
hairpin:
---    u    c     U U   -   -----     augu 
   ccga gccu GGGAG C ACA GCA     GGGcc    c
   |||| |||| ||||| | ||| |||     |||||    u
   ggcu ugga cccuc g ugu cgu     cccgg    g
cgu    u    -     u -   a   gggaa     gagu 


mirna_id: hsa-mir-4301
hairpin:
acc   --     C     A      UU   Aa 
   agc  caccU CCACU CUUCAC  GUG  c
   |||  ||||| ||||| ||||||  |||  a
   ucg  gugga ggugg gaggug  uac  u
guc   ac     c     -      cu   gu 


mirna_id: hsa-mir-4299
hairpin:
---ggg     a  aa         agu        c 
      uucug cc  ucauguuac   guuuucuc u
      ||||| ||  |||||||||   |||||||| u
      aagaC GG  AGUACAGUG   CGagagag u
aggaaa     -  AG         -GU        a 


mirna_id: hsa-mir-4298
hairpin:
-g    gg   -  -GG     -GA  ---AG     AG 
  ggga  uac CU   GACAG   GG     GAGGC  c
  ||||  ||| ||   |||||   ||     |||||   
  ccuu  aug ga   cuguc   cc     cuccg  c
ca    gg   u  aaa     aaa  aaaga     uu 


mirna_id: hsa-mir-4300
hairpin:
---  a         a  g      aaa   --  --a    cau     gau 
   ug guuuagaag gg ccagcu   uca  gc   gaga   gaggu   c
   || ||||||||| || ||||||   |||  ||   ||||   |||||    
   ac caaguCUUC UC GGUCGA   GGU  cg   cuuu   uucca   a
aua  -         A  A      --G   ga  aaa    --u     aaa 


mirna_id: hsa-mir-4304
hairpin:
a      --    C    U   -       uc 
 gagaag  uggC GGCA GUC CAGGGCA  c
 ||||||  |||| |||| ||| |||||||  c
 cucuuc  accg ucgu cag gucucgu  c
c      cu    -    -   u       ua 


mirna_id: hsa-mir-4302
hairpin:
-   -ggaggg   ---    U        GA 
 uca       aCC   AGUG GGCUCAGC  G
 |||       |||   |||| ||||||||   
 agu       ugg   ucau uugagucg  g
g   aagguua   aau    -        gu 


mirna_id: hsa-mir-4303
hairpin:
--agaaaa                  -C   uu 
        uagcUUCUGAGCUGAGGA  AGc  g
        ||||||||||||||||||  |||  c
        aucgaggauucgauuucu  ucg  u
ugguacca                  uu   uc 


mirna_id: hsa-mir-4305
hairpin:
-cu  -cuu    CU   ---CA    -     ------       cu      cc 
   gc    agaC  AGA     CCUC CAGUU      Cuggguu  uagagg  u
   ||    ||||  |||     |||| |||||      |||||||  ||||||   
   cg    ucug  ucu     ggag gucag      gacucaa  aucucc  a
uuu  uuau    uc   uaaag    u     acuuuu       ac      ua 


mirna_id: hsa-mir-4306
hairpin:
-aa  -u     g  u    agag          -  -  ccuaaccc 
   gc  gcuua ug ccuu    ucuccagagg ca uc        a
   ||  ||||| || ||||    |||||||||| || ||         
   ug  uggAU AC GGAA    AGAGGUcucc gu ag        g
cca  uc     G  -    --AG          u  c  uuuucuaa 


mirna_id: hsa-mir-4309
hairpin:
--ucu    g   ------    G    G   U         ggg 
     gggg uuC      UGGA UCUA GAU CCAggaucu   u
     |||| |||      |||| |||| ||| |||||||||    
     cccc aag      gucu ggau uug gguucugga   u
guucu    g   uuuggc    g    g   -         guu 


mirna_id: hsa-mir-4307
hairpin:
----uca    aaa          uaaa   ug    a    uu 
       gaag   aaacaggaga    guu  ugau augu  g
       ||||   ||||||||||    |||  |||| ||||   
       cuuC   UUUGUCCUUU    UAA  auug uaua  u
accggga    --C          UUUG   gu    a    uc 


mirna_id: hsa-mir-4308
hairpin:
---uau    uc             uu   c   aa      u 
      gggu  agagggaacucca  gga aga  uuuccu u
      ||||  |||||||||||||  ||| |||  ||||||  
      ucca  UCUUCUUUGAGGU  CCU ucu  aaagga u
ccuuuu    -U             -C   u   --      g 


mirna_id: hsa-mir-4310
hairpin:
---   c uc      c    -       a 
   ugg g  uggggc ugag gcugcag a
   ||| |  |||||| |||| |||||||  
   acc c  aCCCUG ACUU CGACGuu c
acc   - cc      U    A       a 


mirna_id: hsa-mir-4311
hairpin:
-ucaga     -G     --     GAG         ga  --a           
      gaggg  AAAGA  GAGCU   UGUGaccug  gc   gcucaggagg 
      |||||  |||||  |||||   |||||||||  ||   ||||||||| g
      cuccc  uuucu  cuugg   acauuggac  ug   uggguccuuc 
cuuaga     gg     ag     ---         gg  gag           


mirna_id: hsa-mir-4312
hairpin:
--gaa   uug    c    a        ---a  -    c 
     agg   gggg acag gagcaagg    gc cuuc c
     |||   |||| |||| ||||||||    || ||||  
     ucc   CCCC UGUC CUUGUUCC    ug ggag c
gagac   uuA    -    -        GGac  a    a 


mirna_id: hsa-mir-4313
hairpin:
gau       ---A  -      --G    AA    ugc     c   uggagga 
   caggccc    GC CCCCUG   CCCC  ACCC   agccc agc       u
   |||||||    || ||||||   ||||  ||||   ||||| |||        
   guccggg    ug ggggac   gggg  uggg   ucggg ucg       g
-uc       gaaa  u      uaa    -g    --u     -   uagagga 


mirna_id: hsa-mir-4315-1
hairpin:
--u  gc   gc     ----     A  UG  Cccuc 
   gg  uuu  CCGCU    UUCUG GC  GA     u
   ||  |||  |||||    ||||| ||  ||     c
   uc  agg  ggcga    aagac ug  cu     u
guc  ua   aa     cauc     g  gu  ccauc 


mirna_id: hsa-mir-4316
hairpin:
-----a    ccca   --  A    -A     --U    u 
      gugg    gGG  UG GGCU  GCUGG   Gugg c
      ||||    |||  || ||||  |||||   ||||  
      cacc    ccc  ac ccga  cgacc   cacc a
caccaa    ---a   ua  c    cc     ucu    c 


mirna_id: hsa-mir-4314
hairpin:
gg   u  - --u       AAA    A    ua --u     ca  ga 
  cca uc c   CUCUGGG   UGGG CAGg  g   ggcca  gu  g
  ||| || |   |||||||   |||| ||||  |   |||||  ||   
  ggu ag g   gagaccc   accc gucu  c   ccggu  cg  a
-a   c  u ucu       ggg    c    uc ugu     --  aa 


mirna_id: hsa-mir-4318
hairpin:
----  uu    au     cauaa      u   ---------        
    gc  cuua  uaugu     acccac gug         gacaagg 
    ||  ||||  |||||     |||||| |||         |||||| g
    cg  ggaU  GUACA     UGGGUG CAC         cuguucc 
aacu  -u    -C     -----      U   ugacagauu        


mirna_id: hsa-mir-4319
hairpin:
u     ---ug      -     AA   C   g --g    c   c 
 uggcu     agUCCC UGAGC  AGC ACu g   aaug ucc u
 |||||     |||||| |||||  ||| ||| |   |||| |||  
 acugg     ucgggg acucg  ucg uga u   uugc agg g
-     uagua      u     ac   -   g aua    -   a 


mirna_id: hsa-mir-4320
hairpin:
--gaca   g   uuu        c  uu -  a 
      ugu ggg   gcuguaga au  c ag u
      ||| |||   |||||||| ||  | ||  
      acg UCC   CGAUGUCU UA  G uc a
guuuca   g   -UU        -  GG c  a 


mirna_id: hsa-mir-4317
hairpin:
-aaaag  -        ---G C        Uau 
      gc gagACAUU    C AGGGAGUU   u
      || ||||||||    | ||||||||    
      cg uuuuguaa    g ucucucga   u
cacaaa  a        aaua u        ugu 


mirna_id: hsa-mir-4322
hairpin:
----a   c a         -   -   --gu   g    a 
     ccg g guuccgcgc cug gcc    guc cccc c
     ||| | ||||||||| ||| |||    ||| ||||  
     ggc c cGGGGUGCG GAC CGG    Cag gggg g
uacga   - -         C   U   GUGU   -    a 


mirna_id: hsa-mir-4321
hairpin:
--cu           a  -c  ug  c  cccga      cgc 
    ggucuccgcag gc  uc  cc cu     gacacc   u
    ||||||||||| ||  ||  || ||     ||||||    
    ccggggGCGUC CG  AG  GG GA     UUgugg   a
cggu           C  CC  GU  C  -----      ucc 


mirna_id: hsa-mir-4323
hairpin:
cggg    -   - --    a       -       a 
    gccc agg c  gggc ugugggg ugucugg g
    |||| ||| |  |||| ||||||| ||||||| a
    cggg ucc G  UCCG ACACCCC ACggacc c
--ca    c   A AC    -       G       g 


mirna_id: hsa-mir-4324
hairpin:
--    c      --uua          cucca  gaac 
  cggc ccuuug     agggucucag     gg    u
  |||| ||||||     ||||||||||     ||    u
  gucg ggaAAU     UCCCAGAGUC     CC    u
ac    u      UCCAA          -----  aaaa 


mirna_id: hsa-mir-4256
hairpin:
--uguuccau     U        G  G   u 
          uuAUC GACCUGAU AA GUc c
          ||||| |||||||| || |||  
          aguag cuggauua uu cgg c
gucuuuaccu     u        g  a   u 


mirna_id: hsa-mir-4257
hairpin:
--------    uagaaa         gguagga      -----g   a   a 
        ggcu      cagucccua       uuuggg      agg gcu a
        ||||      |||||||||       ||||||      ||| |||  
        ccGA      GUCAGGGGU       AGACCc      ucc cga g
gguugauu    ------         -----GG      gggaca   c   a 


mirna_id: hsa-mir-4258
hairpin:
-    -          ---    CC    -----U           ucuu 
 acgc cccccgCCCC   GCCA  GCCU      GGaggcugacc    a
 |||| ||||||||||   ||||  ||||      |||||||||||     
 ugug gggggcgggg   uggu  cggg      cuucuggcugg    c
c    a          guu    -u    ucccuu           cuuu 


mirna_id: hsa-mir-4259
hairpin:
-ga       -    ug    -  a ug g  ----------g       g g gg 
   ugggccc cuug  uccu ga u  g ug           gggcucu a u  g
   ||||||| ||||  |||| || |  | ||           ||||||| | |   
   acccggg GGAC  GGGA CU G  U AC           uccgggg u a  g
agg       A    UG    U  G GU G  acuggagggga       g g aa 


mirna_id: hsa-mir-4260
hairpin:
--aacaag     ---      CA   A UC   c 
        gugaC   UUGGGG  UGG G  CCA u
        |||||   ||||||  ||| |  ||| u
        cacug   gacccc  acc c  ggu c
caaccaca     uuc      ac   - ga   c 


mirna_id: hsa-mir-4253
hairpin:
c   -  --au g    u  g g     a g  uu 
 cag cc    c cccu ga g gcccu g ac  a
 ||| ||    | |||| || | ||||| | ||   
 guc gg    G GGGA CU U CGGGA c ug  c
c   u  accU G    C  G A     - g  uu 


mirna_id: hsa-mir-4251
hairpin:
------     ccucca         c    u  c 
      cacgu      gcuuuuuuc uuag gg c
      |||||      ||||||||| |||| || a
      gugcA      CGGGAAAAG AGUC Cu a
accuuc     ----AC         -    -  u 


mirna_id: hsa-mir-4254
hairpin:
---c     a    --              ucu    uga 
    uuggg ggag  ggugggguggcucc   gcag   g
    ||||| ||||  ||||||||||||||   ||||   u
    gaccc cCUC  CCACCUCAUCGAGG   CGuc   a
cccc     -    UA              -UC    ugg 


mirna_id: hsa-mir-4255
hairpin:
--  -  au    CAG     -        Agu   ua 
  ga gc  ccuu   UGUUC AGAGAUGG   cag  u
  || ||  ||||   ||||| ||||||||   |||  u
  cu cg  ggag   acggg uuuuuacc   guc  g
ua  a  ac    -aa     a        --g   ug 


mirna_id: hsa-mir-4252
hairpin:
--ug   g     ca   -ca     cca    a 
    ggg gcugg  gcu   ucagu   ggcc u
    ||| |||||  |||   |||||   ||||  
    ccc cgACC  CGA   AGUCA   CCGG c
cuaa   g     -A   CUG     ---    u 


mirna_id: hsa-mir-4325
hairpin:
------     agaug    A   G    ----AG    aga       ag 
      gggga     UUGC CUU UCUC      UGAg   ugcuucu  a
      |||||     |||| ||| ||||      ||||   |||||||  u
      uuccu     gacg gaa agag      acuc   acggagg  c
uagagu     ----a    -   g    guagga    cag       ac 


mirna_id: hsa-mir-4326
hairpin:
--   g  cug       UCU    -       
  gcu cu   cUGUUCC   GUCU CCCAGA 
  ||| ||   |||||||   |||| ||||| C
  cgg gg   gacgagg   uagg gggucu 
ac   g  cug       ---    u       


mirna_id: hsa-mir-4327
hairpin:
ggc      --       C       ---A     aaga    au 
   cugggu  aGGCUUG AUGGGGG    CUGGg    gacc  g
   ||||||  ||||||| |||||||    |||||    ||||  a
   gacuca  uccgaac uacucuu    gaccu    uugg  a
gau      uu       -       gagg     --ga    ac 


mirna_id: hsa-mir-4261
hairpin:
---   ggaag         cccag        
   ggu     uggguuccu     uuccuga 
   |||     |||||||||     |||||| g
   cca     ACCCAGGGA     AAGGAca 
cga   -gagg         ---CA        


mirna_id: hsa-mir-4265
hairpin:
---u  ag   g ug     uc        c    aa   auu     g  u g 
    gc  ugg u  gagcu  agccuaca cugu  aga   gguca cc g g
    ||  ||| |  |||||  |||||||| ||||  |||   ||||| || |  
    cg  guc G  CUCGA  UCGGGUGU gacg  ucu   cuagu gg c g
gguc  -g   G GU     -C        C    --   ---     -  u a 


mirna_id: hsa-mir-4266
hairpin:
cc    -  --          -    cuc 
  acug cu  ggccggggcc ccua   a
  |||| ||  |||||||||| ||||    
  ugac gg  CCGGUUCCGG GGAU   a
-c    a  aa          A    Cgg 


mirna_id: hsa-mir-4267
hairpin:
--cucagca       -  -UC       ----      gaa g 
         ggcUCCA GC   GGUGGCA    Cugggg   g c
         ||||||| ||   |||||||    ||||||   |  
         ccgaggu cg   cuacugu    gacccc   c u
ccucuacac       a  ucc       cucc      aga c 


mirna_id: hsa-mir-4262
hairpin:
--gaaa         - -    -    g 
      gcugcaggu g cuga uguu g
      ||||||||| | |||| |||| g
      cgacGUCCA C GACU ACAG g
ccgaga         U A    U    g 


mirna_id: hsa-mir-2355
hairpin:
--   ac    c   C       -   U     Au       uau 
  cag  gugu AUC CCAGAUA CAA GGACA  augcuau   a
  |||  |||| ||| ||||||| ||| |||||  |||||||   a
  guc  caua UAG GGUUUGU GUU CCUGU  UAcggua   u
ca   gu    a   A       C   -     --       ugc 


mirna_id: hsa-mir-4268
hairpin:
---a  c      g     -     uuuu   c 
    ug acauca guucu agagg    gcc u
    || |||||| ||||| |||||    ||| a
    ac uguaGU UAGGA UCUCC    CGG g
gucc  -      G     C     UCCU   c 


mirna_id: hsa-mir-4269
hairpin:
acagc     ------G     ACA     CCC       ug cucu 
     gcccu       CAGGC   GACAG   UGGCuuc  c    u
     |||||       |||||   |||||   |||||||  |     
     cgggg       guccg   cuguc   accgaag  g    u
----a     agguagg     -ga     -uc       gu uuuc 


mirna_id: hsa-mir-4263
hairpin:
----aua   cucu       uuu        gauugg  ug  c 
       gug    ucagggu   acuuggga      ag  gc a
       |||    |||||||   ||||||||      ||  ||  
       cac    GGUUCCG   UGAAUCUU      uc  ug g
cauacaa   --CC       ---        Aacaaa  cu  u 


mirna_id: hsa-mir-4264
hairpin:
-aaa  u -ga        - AUG        aa 
    gc g   uACUCAGU C   GUCAUUgu  c
    || |   |||||||| |   ||||||||   
    cg c   auggguca g   cagugaua  a
gaua  u aga        u -ga        gu 


mirna_id: hsa-mir-4270
hairpin:
---a  aauag    AGGG  U           agaa 
    ca     cuUC    AG CAGGGGAGGGC    a
    ||     ||||    || |||||||||||    u
    gu     gaag    uc guccccuuccg    a
cugg  -gaaa    --gg  -           guag 


mirna_id: hsa-mir-4271
hairpin:
a     --c       ---a        g a   c 
 aaucu   ucuccau    ucuuuccu c gcc c
 |||||   |||||||    |||||||| | |||  
 uuaga   aGGGGUG    AGAAGGGG g ugg c
c     uua       GAAA        G g   a 


mirna_id: hsa-mir-4272
hairpin:
uuu   ----      a   auc    -     au 
   ucu    gcacaa uua   aguu aaugc  a
   |||    |||||| |||   |||| |||||  g
   aga    ugUGUU AGU   UCAA UUACg  a
--g   auau      -   -GA    C     aa 


mirna_id: hsa-mir-4273
hairpin:
--uc            --  UC  A    -C    ---    uug 
    cccuguguGUGU  UC  UG UGGA  AGua   agcc   a
    ||||||||||||  ||  || ||||  ||||   ||||   c
    gggauacguaca  gg  ac acuu  ucgu   ucgg   u
uuuc            cu  ua  -    cu    aaa    uau 


mirna_id: hsa-mir-4276
hairpin:
--cacag  u   U     A   -  G   -    a 
       uc gaC CAGUG CUC AU UGC uggc g
       || ||| ||||| ||| || ||| ||||  
       ag cug gucau gag ua aug accg u
uaacgaa  u   u     c   a  a   c    g 


mirna_id: hsa-mir-4275
hairpin:
--     uuug   A    C     C   u   -c  --    gc 
  acauu    uCC AUUA CACUU UUU ugc  ac  cuga  a
  |||||    ||| |||| ||||| ||| |||  ||  ||||   
  uguaa    agg uaau gugaa aaa acg  ug  gacu  c
uc     uuga   g    a     a   u   ac  ac    ga 


mirna_id: hsa-mir-4274
hairpin:
g       ---     uaacu   cu     c   --        cucc 
 gggcauu   uaggg     gag  gcugc ggg  gccuggcg    u
 |||||||   |||||     |||  ||||| |||  ||||||||    c
 cccgugg   GUCCC     CUC  UGACG Ccc  uggacugu    u
-       uac     ----C   CC     A   ag        ucca 


mirna_id: hsa-mir-4281
hairpin:
--   g  gg      ga ag  u   g   g 
  gcu gg  uccccc  c  ug gga cug g
  ||| ||  ||||||  |  || ||| |||  
  cgg uc  GGGGGG  G  GC CCU GGc g
ga   g  uu      AG -G  -   G   c 


mirna_id: hsa-mir-4277
hairpin:
-cu    -     - -A UU       CA UA        ugcc 
   gggu cgagG C  G  CUGAGCA  G  CACugggc    c
   |||| ||||| |  |  |||||||  |  ||||||||     
   cccg guucc g  c  gacucgu  c  gugacccg    c
cuc    u     u aa uc       -- cc        ucac 


mirna_id: hsa-mir-4279
hairpin:
ug   ----u        --      c   uu 
  cuc     guggagcu  gaggag aga  c
  |||     ||||||||  |||||| |||  u
  gag     caCUUCGG  CUCCUC UCu  c
--   uccuc        CC      -   cu 


mirna_id: hsa-mir-4278
hairpin:
---a   aa   c   -a       a   aaca   a 
    ucu  cac agg  gaauccc uag    uug c
    |||  ||| |||  ||||||| |||    |||  
    agg  guG UCC  UUUGGGG AUC    aac a
aaga   -g   U   CG       G   --ac   u 


mirna_id: hsa-mir-4280
hairpin:
a    ---     GA  G    UC      GA      a 
 auca   gggug  GU UAGU  UGAGCA  GCcuua a
 ||||   |||||  || ||||  ||||||  |||||| g
 uagu   uccac  ua guca  acuugu  uggagu g
-    guu     ag  a    ga      -a      a 


mirna_id: hsa-mir-4282
hairpin:
--     a     a   -ga         -u     
  gguga guucc ggg   agauuuuag  augc 
  ||||| ||||| |||   |||||||||  ||| c
  cuacu caAGG CCU   UUUAAAAUc  uaca 
uc     a     A   ACG         uu     


mirna_id: hsa-mir-4285
hairpin:
--auua   g g       G    -    AUcaauauuu     aaug 
      gcu g GCGGCGA UCCG ACUC          uaagg    a
      ||| | ||||||| |||| ||||          |||||     
      cgg c cgucguu aggc uggg          guucc    c
cggggg   g g       a    g    ----------     ggcc 


mirna_id: hsa-mir-4283-1
hairpin:
--a   ugauc UG     CA         - aag  gu u 
   cuc     c  GGGCU  GCGAGUUUg c   gg  g u
   |||     |  |||||  ||||||||| |   ||  |  
   ggg     g  uccga  cguucggac g   cc  u u
ccc   uuccu gu     -c         u gua  ug c 


mirna_id: hsa-mir-4284
hairpin:
---g      ga       -AC  C     --A  aaa    g 
    uucugu  gGGGCUC   AU ACCCC   Uc   gugg g
    ||||||  |||||||   || |||||   ||   ||||  
    gagaua  uuucgag   ug ugggg   ag   uacu a
ggcg      -g       gau  a     gag  ggg    c 


mirna_id: hsa-mir-4286
hairpin:
--uac   u g    C   -----  C      -      ca   -   a 
     uua g cACC CAC     UC UGGUAC Cauagu  uaa guu g
     ||| | |||| |||     || |||||| ||||||  ||| |||  
     aau c gugg gug     ag accaug gugucg  auu uag g
guaca   u g    u   aauuc  u      a      ag   g   a 


mirna_id: hsa-mir-4287
hairpin:
ua      --uu       -UG    --   ----U        
  guucuu    UCUCCCU   AGGG  CAC     UUucagu 
  ||||||    |||||||   ||||  |||     |||||| u
  cgagga    agagggg   uccc  gug     agagucc 
cc      uacc       uca    ug   uaacu        


mirna_id: hsa-mir-4288
hairpin:
--aug  g       g   u   -        ag 
     ga guggaga uca cag cagcacug  c
     || ||||||| ||| ||| ||||||||   
     cu caCCUUU AGU GUC GUUgugac  a
guuua  g       G   C   U        gg 


mirna_id: hsa-mir-4292
hairpin:
----gaga     ga     accu       a   - a 
        cacca  aggcc    gcuuagg ggc c g
        |||||  |||||    ||||||| ||| |  
        guGGU  UCCGG    CGGGUCC CCg g a
cccgggga     --     ---C       -   u g 


mirna_id: hsa-mir-4289
hairpin:
--cc   gga    A    --        AU    ca 
    uug   ggGC UUGU  GCAGGGCU  CAgg  g
    |||   |||| ||||  ||||||||  ||||   
    gac   uccg gacg  ugucccgg  gucc  u
acua   aaa    a    uc        --    uu 


mirna_id: hsa-mir-4290
hairpin:
--gccaccaa  a  -u          u   u   aa    aauc     aa 
          ga gg  gaagggaggg cag ccc  ucug    ccacc  a
          || ||  |||||||||| ||| |||  ||||    |||||   
          CU CC  CUUUCCUCCC GUu ggg  agau    ggugg  a
ccagucucca  C  UU          -   -   --    ----     au 


mirna_id: hsa-mir-4291
hairpin:
cgccg      U    -----A         gg  g 
     ggggcU CAGC      GGAACAGCU  gu g
     |||||| ||||      |||||||||  ||  
     ucccga gucg      ucuugucga  cg a
----g      c    gugucg         ga  g 


mirna_id: hsa-mir-4329
hairpin:
uagaga    g   -u  c        -    uuuu 
      ggaa gug  ac aggguuuu ggag    u
      |||| |||  || |||||||| ||||     
      ucuu CAC  UG UCCCAGAG CCuc    u
-cgagg    a   CU  A        U    cuuu 


mirna_id: hsa-mir-4330
hairpin:
-aa   -  a   -   aa u         u    ga  g    gg   u  u 
   uug uc gca ggc  u aucugagga gcag  ga gaag  ggc uc u
   ||| || ||| |||  | ||||||||| ||||  || ||||  ||| || u
   gac gg CGU CCG  A UAGACUCCu cguc  cu cuuc  ccg ag u
ccg   u  a   U   AG C         -    ga  a    au   c  u 


mirna_id: hsa-mir-500b
hairpin:
-      cu -u         UAC       ag g   uuu 
 cccccu  c  AAUCCUUGC   CUGGGUg  a ugc   c
 ||||||  |  |||||||||   |||||||  | |||   u
 ggggga  g  uuaggaacg   gacccac  u acg   g
a      ac uc         ---       -g g   uaa 


mirna_id: hsa-mir-4328
hairpin:
---         g     a   cc    a 
   aacaguuga uccug gaa  auug g
   ||||||||| ||||| |||  |||| a
   uugucaaUU AGGAC CUU  UGAC a
gcc         -     C   -U    C 


mirna_id: ssc-mir-194b
hairpin:
--    a    cU         A      G    cu  gc 
  cgcc ucag  GUAACAGCG CUCCAU UGGA  gu  c
  |||| ||||  ||||||||| |||||| ||||  ||   
  gcgg aguU  CAUUGUCGU GAGGUG ACCu  ua  c
ca    c    UC         A      -    -u  ac 


mirna_id: ssc-mir-296
hairpin:
--  c     c        C  -         G   ugc 
  ga ccuuc gGAGGGCC CC CCCAAUCCU Uug   u
  || ||||| |||||||| || ||||||||| |||   g
  cu ggaag CCUUUCGG GG GGGUUGGGA gac   g
gu  c     u        A  C         -   uua 


mirna_id: ssc-mir-155
hairpin:
--c     g              U   A        uuu  c 
   uauau cugUUAAUGCUAAU GUG UAGGGGuu   ac u
   ||||| |||||||||||||| ||| ||||||||   ||  
   guaug gACAAUUACGAUUG UAC AUCCUcag   ug c
gua     g              -   -        -uc  c 


mirna_id: ssc-mir-411
hairpin:
--cuug   a a    a      a a       - uuu 
      gag g uagu gaccgu u gcguacg c   a
      ||| | |||| |||||| | ||||||| |   u
      cuc C AUCA CUGGCA A UGUAugc g   c
cuauga   c A    C      C A       a ugu 


mirna_id: ssc-mir-133a-2
hairpin:
---------  g       AA  U  A        gccuc 
         ua AGCUGGU  AA GG ACCAAAUc     u
         || |||||||  || || ||||||||      
         au UCGACCA  UU CC UGGUUuag     u
uacguaucg  G       AC  C  C        guaac 


mirna_id: ssc-mir-4331
hairpin:
-ccau     -a    g  g       a      ucagau 
     gagcu  uggc ua aucacag cacagc      c
     |||||  |||| || ||||||| ||||||       
     uucga  ACCG AU UGGUGUC GUGUcg      u
cucgu     CG    G  G       G      uuacgg 


mirna_id: ssc-mir-382
hairpin:
--ac         -A           UG      - uuu 
    uugaagagA  GUUGUUCGUGG  GAUUCG c   a
    |||||||||  |||||||||||  |||||| |   c
    gacuuuuuu  caacaggcacu  cuaagc g   u
ccau         ca           ua      a uau 


mirna_id: ssc-mir-381
hairpin:
--         a  C   G   C    U        g g u 
  ugguacuua AG GAG UUG CCUU GUAUAUUc g u u
  ||||||||| || ||| ||| |||| |||||||| | | u
  acuaugagu uc cuc aac ggaa cauauaag u g g
aa         g  u   g   a    -        g g a 


mirna_id: ssc-mir-362
hairpin:
-ccc     -ca          ACC        -A UG     
    ccucu   AAUCCUUGGA   UAGGUGUG  G  cugc 
    |||||   ||||||||||   ||||||||  |  ||| u
    ggaga   uuaggaacuu   auccacac  c  gauc 
aguc     aac          ---        aa gu     


mirna_id: ssc-mir-490-1
hairpin:
--uu        C      -   -      G   cac   u 
    guucgaca CAUGGA UCC CCAGGU GGU   guu c
    |||||||| |||||| ||| |||||| |||   |||  
    cgaguuGU GUACCU AGG GGUCCA Cca   uag a
uugu        C      C   A      A   -ca   a 


mirna_id: ssc-mir-376c
hairpin:
--    u    g     UA     U         uguua 
  uauu aaaa GUGGA  UUCCU CUAUGUUUA     u
  |||| |||| |||||  ||||| |||||||||     u
  auga uuuu caccu  aagga gauacaaau     u
cu    c    g     ua     -         uggug 


mirna_id: ssc-mir-376b
hairpin:
--    u    g    CUA     U         uguua 
  uauu aaaa GUGG   UUCCU CUAUGUUUA     u
  |||| |||| ||||   ||||| |||||||||     u
  auga uuuu cacc   aagga gauacaaau     u
cu    c    g    uua     -         uggug 


mirna_id: ssc-mir-4332
hairpin:
-   c    -      g   g     g  -  c  -g          g g   gg 
 cgg gggg gguguc cgg ggugg cg gg ug  ggccgggggu g gcc  c
 ||| |||| |||||| ||| ||||| || || ||  |||||||||| | |||   
 gcc ccuu CCGCGG GCC CCGCC GC Cc gc  cuggccccca c cgg  g
c   a    u      -   G     G  A  u  gg          g a   gg 


mirna_id: ssc-mir-4333
hairpin:
--ugagauaaauAUAC     UG      UUU           -  ---   a  u   a 
                CUGCA  UUAGUC   GGUUCUgguag aa   aug ca gca u
                |||||  ||||||   ||||||||||| ||   ||| || |||  
                ggcgu  ggucag   ucaggacuauc uu   uac gu cgu u
aaugauugguuucaca     gu      --c           a  uua   c  -   g 


mirna_id: ssc-mir-652
hairpin:
--ua                  GAGAG           ca  g 
    ugcacugcACAACCCUAG     GGUGCCAUUCA  ua a
    ||||||||||||||||||     |||||||||||  || c
    acgugacguguugggauc     ccgcgguaagu  au u
caac                  ----a           ua  a 


mirna_id: ssc-mir-1224
hairpin:
------  -    cuugg      cuc         a   --u    cu  ca   c   g 
      cc uacc     ugagga   gggaggugg ggg   ggcg  gc  gag cag g
      || ||||     ||||||   ||||||||| |||   ||||  ||  ||| |||  
      gg gUGG     ACUCCU   UCCUCCACc ccc   ucgc  cg  cuc guc c
gacguu  c    -----      CUC         c   ucu    -u  -a   u   a 


mirna_id: ssc-mir-4334
hairpin:
--cu   cu    -       U        ---  aa 
    gug  gagC CCUGGAG GACGGGGG   UG  a
    |||  |||| ||||||| ||||||||   ||   
    uac  CUCG GGACCUC CUGUCCCU   ac  g
ggug   cc    A       -        gag  gg 


mirna_id: ssc-mir-1271
hairpin:
--   au             c     a          ua 
  uag  cagugcuuggcac uagua gcacucagua  u
  |||  ||||||||||||| ||||| ||||||||||   
  guc  guuACGGACCGUG AUCGU CGUgaguugu  a
ga   gu             U     C          uc 


mirna_id: ssc-mir-4335
hairpin:
ccu     ----a    --  -          cac 
   cuucc     gccc  ca cguugggcgc   u
   |||||     ||||  || ||||||||||   c
   gaagg     CGGG  GU GCGACCCGUG   u
--c     gauaA    AC  C          ucg 


mirna_id: ssc-mir-218-1
hairpin:
--a   u      U         CU        gg    -  g 
   gau uucugU GUGCUUGAU  AACCAUGU  uugc ca g
   ||| |||||| |||||||||  ||||||||  |||| ||  
   cug aagGUA CACGAACUG  UUGGUAca  aaug gu u
gca   c      C         UC        -a    a  a 


mirna_id: ssc-mir-421
hairpin:
-   uu      -    UUA            A   aaa 
 aca  guaggC CUCA   AAUGUUUGUUGA UGA   a
 |||  |||||| ||||   |||||||||||| |||   a
 ugu  cgucCG GGGU   UUACAGACAACU Acu   u
g   cu      C    UAA            -   aag 


mirna_id: ssc-mir-146a
hairpin:
---ua       uU            C        g  uc 
     cucagcu  GAGAACUGAAUU CAUGGGUU ug  a
     |||||||  |||||||||||| |||||||| ||  u
     gggucGA  UUCUUGAUUUGA GUGUCCag ac  u
cuaua       -C            A        -  ug 


mirna_id: ssc-mir-383
hairpin:
-cc     -c  a      aa    a        uug   aga 
   ugcuc  uc gaucag  ggug uuguggcu   ggu   u
   |||||  || ||||||  |||| ||||||||   |||    
   acgag  AG CUGGUC  UCAC GACACCga   cua   a
uga     aa  A      CG    -        ---   auu 


mirna_id: ssc-mir-487b
hairpin:
--    ug        UUAU      C U     uuuua 
  uacu  gagaGUGG    CCCUGU C GUUCG     c
  ||||  ||||||||    |||||| | |||||      
  auga  uuuucacc    gggaca g uaagc     u
cu    cu        uacu      u c     uguac 


mirna_id: ssc-mir-484
hairpin:
gca    ---uc   a  c  a       ccc  uaaac    a 
   gcca     guc gg uc guccccu   ga     cccu a
   ||||     ||| || || |||||||   ||     ||||  
   cggu     CGG CC AG CGGGGGA   Cu     ggga a
-aa    uuuuU   A  C  -       -CC  -ucca    u 


mirna_id: ssc-mir-4336
hairpin:
-ccuca   -   AAC   -      UC    A        a   c 
      uag agC   UCU GUGGUU  CUUU CUCAUAGa cua a
      ||| |||   ||| ||||||  |||| |||||||| ||| u
      auc ucg   aga caucaa  gaag gggugucu gau g
aaauaa   g   -ac   a      --    -        a   u 


mirna_id: ssc-mir-1296
hairpin:
--    a           C CU        CU   u     a 
  ccua cugggUUAGGG C  GGCUCCAU  CCu uagga a
  |||| ||||||||||| |  ||||||||  ||| ||||| a
  gggu gacCCAAUCCC G  UUGGGGUG  ggg gucuu c
uc    c           A UU        AG   u     c 


mirna_id: ssc-mir-4337
hairpin:
--                               Guuaaa 
  ggcacuagacAGGGUAUAUAAGCCUUCACUG      u
  |||||||||||||||||||||||||||||||       
  ccgugaucuguucuauauauucggaagugac      c
ac                               auacaa 


mirna_id: ssc-mir-4338
hairpin:
--      c                        Cgu ug 
  aucucu gagAUGUUCAGUCUCAGUGGGAAC   g  u
  |||||| ||||||||||||||||||||||||   |  a
  uaggga cucuacgagucagaguuacccuug   c  a
ac      a                        -uu ug 


mirna_id: ssc-mir-494
hairpin:
---   ga          -G      -   C   -  Uuu 
   cuc  aggagAGGUU  UCGUGU UGU UUC UC   a
   |||  ||||||||||  |||||| ||| ||| ||   c
   gag  uuuucuccaa  ggcaca aca aag ag   u
uau   -g          ag      u   -   u  uau 


mirna_id: ssc-mir-4339
hairpin:
--cug             AGC   CC      G   -  ccc 
     ugcuccgGCUCUG   UGC  CUCCUC UCC gu   c
     |||||||||||||   |||  |||||| ||| ||    
     acgaggccgagac   gcg  gaggag agg cg   u
cggug             --a   cc      -   u  acc 


mirna_id: bmo-mir-92a
hairpin:
g          c     a u      c  c     cg   c 
 gcccguuugg ugggc g gacugg gc auauu  gua g
 |||||||||| ||||| | |||||| || |||||  |||  
 cgggcgagcc AUCCG C CUGACC CG UAUag  cgu u
-          U     G C      A  U     --   g 


mirna_id: tgu-mir-204-5
hairpin:
         U   A     U    --ga    
gcUUCCCUU GUC UCCUA GCCU    gcg 
||||||||| ||| ||||| ||||    || a
cggagggaa cgg agggu cgga    cgu 
         c   c     -    gguc    


mirna_id: tgu-mir-34c-1
hairpin:
    g    cA       U      C       cugca 
cuug uuug  GGCAGUG AGUUAG UGAUUGU     g
|||| ||||  ||||||| |||||| |||||||      
gaac aaac  ccgucac ucaauc acuaaca     a
    a    ca       u      -       ccuua 


mirna_id: isc-mir-1993
hairpin:
g   -   a  g         a        -a   u -  a 
 gcg cca cc cgugaacac agcgugau  ccg g cu g
 ||| ||| || ||||||||| ||||||||  ||| | || g
 cgu ggu gG GCGCUUGUG UCGUAUUA  ggc c gg c
-   u   c  G         A        Cg   u a  u 


mirna_id: isc-mir-278
hairpin:
ugcauua     u        uc        uu       u    gu      u 
       uaggc cugaugug  cggaugaa  ucucgcc ggcc  uuccgg c
       ||||| ||||||||  ||||||||  ||||||| ||||  ||||||  
       auccg gacugcaU  GCCUGCUU  AGGGUGG CUgg  aaggcc c
-----ac     -        UU        UU       -    ac      c 


mirna_id: bta-mir-3600
hairpin:
ca   -g   AC         AC     -      --g  gg 
  gag  gca  AGUUCUUCA  UGGCA GCUUua   cu  g
  |||  |||  |||||||||  ||||| ||||||   ||   
  cuc  cgu  ucaagaagu  accgu cgaaau   gg  u
ga   gg   ca         -c     u      aca  ac 


mirna_id: bta-mir-2957
hairpin:
cg      A       C       --    ---   c 
  ggcCCA GUUCUGU AUGCACU  GAcu   gcu c
  |||||| ||||||| |||||||  ||||   |||  
  ccgggu caagaca uauguga  cuga   cga a
gg      c       c       gg    gcc   g 


mirna_id: bta-mir-3578
hairpin:
uu       -   aaaagu     c    aau       caua 
  ugguacu gaa      guugu cgug   gauucgu    a
  ||||||| |||      ||||| ||||   |||||||     
  accauga cuu      CAACA GCAC   CUAAGcg    g
ac       a   -cuCUU     A    CAC       aaau 


mirna_id: bta-mir-409b
hairpin:
u a   -  aaa       CA         A  -    g 
 g uac cg   aGGGGUU  CCGAGCAAC UU Cguc u
 | ||| ||   |||||||  ||||||||| || |||| c
 c aug gc   ucuccaa  ggcucguug aa guag c
a c   c  ccc       ug         a  c    a 


mirna_id: bta-mir-3601
hairpin:
  -     c    a uu    a  -      a  -   ac 
cc cagac uuuc g  auca uc ugucac ag ugc  a
|| ||||| |||| |  |||| || |||||| || |||   
gg gucug agAG C  UAGU AG ACAGUG UC aug  g
  a     u    C CC    -  U      C  U   gu 


mirna_id: bta-mir-3602
hairpin:
-cacau  aac                  ----A           uaaua 
      cc   acgugacGUGUUGGGAUC     CCGCGGUAAgu     u
      ||   ||||||||||||||||||     |||||||||||     c
      gg   ugcacugcacaacccuag     ggugccauuca     a
acgaau  cua                  gagag           cauag 


mirna_id: bta-mir-26c
hairpin:
c     c c u  g   g       -  g  a      ---------  c 
 aggcc g g cc cgu caaguaa cc ag auaggc         cc u
 ||||| | | || ||| ||||||| || || ||||||         ||  
 uccgg c c gg gcA GUUCAUU GG UC UAUCCG         gg u
u     - a c  a   A       A  -  C      Acacgucca  g 


mirna_id: bta-mir-3604-1
hairpin:
   a   UAA   A   G         GUacaca     ag 
ccc gcc   CCA UGU CAGACUACU       uucag  c
||| |||   ||| ||| |||||||||       |||||   
ggg cgg   ggu aca gucugaugg       aaguc  c
   -   uug   c   a         -----ac     cc 


mirna_id: bta-mir-3604-2
hairpin:
ca c   A   A   GC      -    acaau ug    
  g cUA CCA UGU  AGACUA CUGU     u  gga 
  | ||| ||| |||  |||||| ||||     |  || g
  c gau ggu aca  ucugau gaca     a  ccu 
gg a   g   c   aa      a    ----- gu    


mirna_id: bta-mir-3596
hairpin:
cucga ga   c          auaguuaucuuccgaggggg 
     g  agg aguagguugu                    c
     |  ||| ||||||||||                    a
     c  UCC UCAUCCAACA                    a
----c AC   A          CACCAAagucccaucacuac 


mirna_id: hsa-mir-1233-2
hairpin:
guga        c      acgg    ggga    ca     aug 
    gugggagg cagggc    cagg    gcug  gggcu   g
    |||||||| ||||||    ||||    ||||  |||||    
    CGCCCUCC GUCCCG    GUcu    cgac  cccgg   g
--GA        U      ---A    ---g    --     gga 


mirna_id: hsa-mir-3605
hairpin:
acuuuauac    aauugugaU        A     A   A    cucccac 
         gugu         GAGGAUGG UAGCA GGA GCCg       c
         ||||         |||||||| ||||| ||| ||||       u
         cgca         CUCCUGUC AUUGU CCU Cggc       g
------gcu    -gggugGAU        C     G   C    acuccca 


mirna_id: hsa-mir-3606
hairpin:
uuguugcuau      U        CU       U 
          cuaggU AGUGAAGG  AUUUUAA U
          |||||| ||||||||  ||||||| u
          GAUUCA UCACUUUC  UAAAAuu u
---------g      -        UU       u 


mirna_id: hsa-mir-3607
hairpin:
aagguu cg      GU  UG    -AAAU      ga   a 
      g  guGCAU  GA  AAGC     CAGUau  aug a
      |  ||||||  ||  ||||     ||||||  |||  
      c  cauGUA  CU  UUCG     GUCAua  uac u
---acu au      GU  --    CAAAU      -g   u 


mirna_id: hsa-mir-3609
hairpin:
--  aa    aacuu      -       ccu           
  gu  cagu     uuauuc ucauuuu   uuucucuacc 
  ||  ||||     |||||| |||||||   ||||||||| u
  cg  GUCG     AAUGAG AGUGAAA   gaagagaugu 
cc  ag    GUCAU      U       --C           


mirna_id: hsa-mir-3610
hairpin:
aaga     g   uaa    a   a    guuug     g 
    gccgc gcg   cggc gcc ucuu     uuuga u
    ||||| |||   |||| ||| ||||     ||||| G
    cggcg ugu   GCCG CGG AGGA     AGGCU A
---g     g   -cg    -   -    ----A     A 


mirna_id: hsa-mir-3611
hairpin:
      u   a            uu           augaa 
agcagg cua uaagaauuucuu  ucuucacaauu     a
|||||| ||| ||||||||||||  |||||||||||     g
ucguuu gau AUUCUUAAAGAA  AGAAGUGUUaa     a
      u   c            --           agaaa 


mirna_id: hsa-mir-3612
hairpin:
   a      a  --    G  A   U A   A      gaaug 
ggg cugggg ug  AGGA GC UCU G GAA UGGAag     g
||| |||||| ||  |||| || ||| | ||| ||||||      
cuc gauccc ac  uccu cg aga c cuu accuuc     g
   -      c  ag    g  g   u a   g      aucua 


mirna_id: hsa-mir-3613
hairpin:
u  uug   u    uU    UA               g ugc 
 gg   ggu ugga  GUUG  CUUUUUUUUUUGUUC u   a
 ||   ||| ||||  ||||  ||||||||||||||| |   u
 cu   cca aCUU  CAAC  GAAAAAAAAAACAag a   u
a  uca   c    CC    CC               g uuu 


mirna_id: hsa-mir-3614
hairpin:
gguucuguc ug gC    U                  uuug 
         u  g  CACU GGAUCUGAAGGCUGCCCc    c
         |  |  |||| ||||||||||||||||||     
         a  U  GUGG UCUAGACUUCCGAUgggg    u
ucauucuua gU UU    U                  ucuc 


mirna_id: hsa-mir-3615
hairpin:
    c g  a    ca  c      c     g    uu  u u 
gacu u gg cgcu  ga gccgcg ggggc ggga  gg c g
|||| | || ||||  || |||||| ||||| ||||  || |  
uugg a cc gcgg  CU CGGCGC CCUCG CUCU  cc g u
    c g  g    cg  -      U     G    CU  u g 


mirna_id: hsa-mir-3616
hairpin:
u    -       a              A   A         ugc 
 guca cuccgcc gcaucAUGAAGUGC CUC UGAUAUGUu   c
 |||| ||||||| |||||||||||||| ||| |||||||||   c
 cggu ggggCGG CGUAGUACUUUACG GAG acugugcga   c
a    u       A              G   C         cua 


mirna_id: hsa-mir-3617
hairpin:
   u  u      -      -U   AA        uagaa 
agg ca agAAAG ACAUAG  UGC  GAUGGGau     a
||| || |||||| ||||||  |||  ||||||||      
ucc gu UCUUUC UGUAUC  ACG  CUACucug     c
   c  c      C      CC   -A        uauac 


mirna_id: hsa-mir-3618
hairpin:
       ag        ga   c  a    ug       gguu 
uaagcug  ugcauugu  uuu ca uaau  aggcagu    c
|||||||  ||||||||  ||| || ||||  |||||||     
guucgac  guguaaCG  AAA GU AUUA  UCUGUcg    u
       cg        AG   A  A    CA       aaaa 


mirna_id: hsa-mir-3619
hairpin:
     -a       -a U           C    G AG   g 
acggc  ucuuugc  c CAGCAGGCAGG UGGU C  Ccc u
|||||  |||||||  | ||||||||||| |||| |  ||| g
ugucg  aggaaug  G GUCGUCCGUCC ACCA G  Ggg g
     gc       gG U           U    G --   u 


mirna_id: hsa-mir-23c
hairpin:
a  g       --a    -    --a  --    -  ---     -aa     gu 
 gu acuuucc   ggug ucac   ca  guga gu   ggcau   ucaga  a
 || |||||||   |||| ||||   ||  |||| ||   |||||   |||||   
 ca ugaaagg   CCAU AGUG   GU  CACU ca   ccgua   aguuu  c
g  g       aaC    U    ACC  UA    A  uac     cug     aa 


mirna_id: hsa-mir-3620
hairpin:
g  a    g   cca      a U     GGGC  GG  GG 
 ug ggug ggg   gcaggg G GGGCU    UG  CU  G
 || |||| |||   |||||| | |||||    ||  ||  C
 AC CCAC CCC   CGUCCC C Uccgg    ac  gg  C
G  -    G   -UA      A -     ---a  au  aa 


mirna_id: hsa-mir-3621
hairpin:
gugagcug   -       ------    -   G   UGCAG      gc 
        cug gggaCGC      GGGU CGG GUC     Ggcggu  g
        ||| |||||||      |||| ||| |||     ||||||   
        gac cccugug      uccg gcc cag     ccgccg  g
--------   a       ucuguu    c   g   -ucca      ac 


mirna_id: hsa-mir-3622a
hairpin:
                   C     C         -g   g 
aauagagggugcaCAGGCA GGGAG UCAGGUGAG  cag g
||||||||||||||||||| ||||| |||||||||  |||  
uuaucucccacgUGUCCGU CCCUC AGUCCACUc  guc a
                   A     C         ga   g 


mirna_id: hsa-mir-3622b
hairpin:
agugaua                          G         cu   c 
       uaauagagggugcacAGGCAUGGGAG UCAGGUGAg  cag u
       |||||||||||||||||||||||||| |||||||||  |||  
       guuaucucccacguGUCCGUGCCCUC AGUCCACUc  guc c
----ucg                          G         -c   c 


mirna_id: vvi-MIR3623
hairpin:
        u    a    CA       A             uaaagcucaaac      ac      c 
aagaauuu gaug ucuU  CAAGUUC UCCAAGCACCAuc            aggccu  gguuuu u
|||||||| |||| ||||  ||||||| |||||||||||||            ||||||  ||||||  
uucuugaa uuac agaA  GUUUAAG AGGUUCGUGGUag            uucgga  ucaaaa u
        -    a    UC       C             ------uacuua      --      c 


mirna_id: vvi-MIR2950
hairpin:
uggcuua      c ug                U       UG   --    gc 
       cauggg u  ugauguaUUCCAUCUC UGCACAC  GAc  cagc  u
       |||||| |  |||||||||||||||| |||||||  |||  ||||   
       guacuu g  acuacAUAAGGUAGGG ACGUGUG  uug  gucg  c
-ggugua      a gu                C       GU   ac    ac 


mirna_id: vvi-MIR3624
hairpin:
g                   U    uaucu     a       -c       -          a           cuaugguggcuucucugcuggguuaa 
 ggUAGUAUGCUGCUGUCUU AGAa     ggaug aguuuau  ucugcaa gguggcaaga caucaagagua                          g
 ||||||||||||||||||| ||||     ||||| |||||||  ||||||| |||||||||| |||||||||||                           
 UCAUCAUACGACGACGGGA Ucuu     cuuac ucgagua  agacguu ccaccguuuu guaguucucau                          g
u                   C    cgacu     c       cu       u          g           aacuauaguuuaguggggucuucuuc 


mirna_id: vvi-MIR3625
hairpin:
    a   c     - u      ---u -               C          AA  u      aaac ug   --  c 
caag aga uauac c uauaca    c aguuuuggcUUCCAG AGUCAUCUCC  GG ggagca    u  auu  gc c
|||| ||| ||||| | ||||||    | ||||||||||||||| ||||||||||  || ||||||    |  |||  ||  
guuu ucu guaug g gugugu    g ucaaaacCGAAGGUC UCAGUAGAGG  cc ccucgu    a  uaa  cg u
    g   c     u u      uuau c               A          GC  u      --cu gu   gu  u 


mirna_id: vvi-MIR3626
hairpin:
            A                               a   c 
gccuucaccGGU GUCGCUGUGAAAUUGAAguauaguuugcgcu uuc a
|||||||||||| ||||||||||||||||||||||||||||||| |||  
cggaagugguCA CAGCGACACUUUAACUUCauaucaaacguga agg a
            C                               c   u 


mirna_id: vvi-MIR3627
hairpin:
ga   aaa    -   a --aa           -    u                A    AC     -      uag 
  agg   gcga gaa g    agagggguugg gggu ucUUGUCGCAGGAGAG CGGC  Uugcu cuugug   c
  |||   |||| ||| |    ||||||||||| |||| |||||||||||||||| ||||  ||||| ||||||    
  ucc   cgcu cuu c    uuucuucgacu ccca aGAACAGUGUCCUCUC GCCG  aacgg gaacgu   a
ca   ---    u   a aucc           u    u                -    CU     c      uaa 


mirna_id: vvi-MIR3628
hairpin:
    gauuauu  ug uaa                           C          ugccaccuacuaagauua 
gaau       gu  u   agagauaauggaaagggAUGCGAGAGC GUGCUUAGUA                  u
||||       ||  |   ||||||||||||||||||||||||||| ||||||||||                  u
cuug       cg  a   ucucuauuaccuuucCCUACGCUCUCG CACGAAUCgu                  g
    -gcccuu  gu --c                           A          cuacuucaaaauauauaa 


mirna_id: vvi-MIR3629a
hairpin:
u          CG                    a     ---u g  uuua     uuaucgacuuggauugugcugcuaguugcugcacauu 
 uuuuuuuucc  CAUUUUCUCAGCAGCCAAGc gagug    g gg    agaga                                     u
 ||||||||||  |||||||||||||||||||| |||||    | ||    |||||                                     u
 aagaaaaAGG  GUAAAAGAGUCGUCGGuuug uucac    u cc    ucucu                                     c
a          AU                    a     uauu g  ----     auguuuagguuugggucaaccuuggugaacuuugggu 


mirna_id: vvi-MIR3629b
hairpin:
uuug     g   ---gg          a    ---a   gguu        uuu aa 
    uuuuc ucc     uuucucagca ccaa    cag    cauucgau   g  a
    ||||| |||     |||||||||| ||||    |||    ||||||||   |   
    gggag AGG     AAAGAGUCGU GGuu    guc    guaggcua   c  u
---a     a   AUGUA          C    gugg   ----        cau cu 


mirna_id: vvi-MIR3629c
hairpin:
   g     C          A  -U        c  ugaagcuugaggacauaaaaauagg 
ucu uuuGG UGCUGAGAAA UG  AGGAaaag ga                         u
||| ||||| |||||||||| ||  |||||||| ||                         u
agg aaacc augacucuuu ac  uccuuuuc cu                         g
   g     a          -  uu        -  uucucccguugucggcagaguuugg 


mirna_id: vvi-MIR447b
hairpin:
gccaaca       uuucua   cu      UU U          U   a      gua 
       cgaggca      uug  cACUCU  C CAAGGGCUUC AGc uugcca   a
       |||||||      |||  ||||||  | |||||||||| ||| ||||||   c
       gcucugu      aac  GUGAGA  G GUUUCUGAAG ucg aacggu   a
cguauaa       --ugca   aG      GG -          C   -      aaa 


mirna_id: vvi-MIR3630
hairpin:
       g       --  U  C   A  AGA        --   g  -c      
caguaug uugUGCA  AG GA GAU UC   CAgggaca  uca ca  cucca 
||||||| |||||||  || || ||| ||   ||||||||  ||| ||  |||| a
guuauac aaCACGU  UC CU CUA AG   GUUUcugu  agu gu  gaggu 
       g       AG  U  -   -  --G        uu   a  aa      


mirna_id: vvi-MIR3631a
hairpin:
            guc                                              c          A                    a     c     cua   a 
aggugguguuug   uuugguugaauagaaaaagucaaaauauuuggcuuuuucuauucag uaaaaguaaC UGUUGACAUCAUCCAAUAUA uuaaa ugaac   uug u
||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||| |||||   |||  
uccaccacaaac   aaaccgauuuaucuuuuucgguuuuauaaaccgaaaaagauaaguc auuuucauug ACAACUGUAGUAGGUUAUAU gauuu acuug   aac a
            aaa                                              a          A                    c     u     ---   a 


mirna_id: vvi-MIR3631b
hairpin:
                -a      c    c  c          A                    a     c     cua   a 
gugguguuuguuuuuu  uuuuuu uauu ag uaaaaguaaC UGUUGACAUCAUCCAAUAUA cuaaa ugaac   uug u
||||||||||||||||  |||||| |||| || |||||||||| |||||||||||||||||||| ||||| |||||   |||  
caccacaaacaaaaaa  gaaaaa auaa uc auuuucauUG AUAACUGUAGUAGGUUGUau gauuu acuug   aac a
                cc      a    a  a          A                    c     u     ---   a 


mirna_id: vvi-MIR3631c
hairpin:
    u         c    uuu  u      uuu      uaa   cuaauaaauaua    u           u       uc     -au      c          -gacu    a                  A      C            A c    c c   a   u 
uaga aaauaaaug aaau   ag aaguac   ucuuaa   guu            aauu aggugguguuu uuuuuug  ugaau   aaaaga uaaaauauuu     uuuu uauuuaguuaaaaguaaC UGUUGA AUCAUCCAAUAU a uaaa u aac uau a
|||| ||||||||| ||||   || ||||||   ||||||   |||            |||| ||||||||||| |||||||  |||||   |||||| ||||||||||     |||| |||||||||||||||||| |||||| |||||||||||| | |||| | ||| ||| a
auuu uuuauuuau uuua   uc uuuaug   agaauu   caa            uuaa uccaccauaaa aaaaaac  acuua   uuuuuu guuuuauaaa     aaaa auaagucaauuuucauug acaacu uaguagguuaua u auuu a uug aua u
    u         u    --u  u      --u      uac   ------------    u           c       ua     auc      a          aucau    a                  a      a            c a    c c   a   a 


mirna_id: vvi-MIR3631d
hairpin:
         c     a    caa               g            uaucaauaa                  uau    a      a          a g                  ugau 
uaaaaguaa cuauu auau   ccaacauaauuaaaa ugaacuuguuau         guuuaguuuaguuauauu   ugau uuaaua guuacuuuua c gaauaggaaaaacuaagg    g
||||||||| ||||| ||||   ||||||||||||||| ||||||||||||         ||||||||||||||||||   |||| |||||| |||||||||| | ||||||||||||||||||     
auuuucauu gauaa uaua   gguuguauuaauuuu acuugaacaaua         caagucaaauuaAUAUAA   ACUA AGUUGU Caaugaaaau g cuuaucuuuuuugauuuu    u
         a     c    aua               -            -------ua                  CCU    C      A          a a                  uguu 


mirna_id: vvi-MIR3632
hairpin:
      -     a ua      ga ug  a aa        g c   -        C GAU       -   ccuaa     u 
guguag gagaa g  aaggga  g  ag g  uggggagc u uGG AUUGGGGG C   GGAAAGG guc     acauu g
|||||| ||||| |  ||||||  |  || |  |||||||| | ||| |||||||| |   ||||||| |||     |||||  
uacguc cucuu c  uucccu  c  uc c  acccuucg a ACC UAACCCCC G   CCUUUcc uag     uguag a
      u     c --      ac cu  - --        g A   A        A -AC       a   aagug     a 


mirna_id: vvi-MIR3633a
hairpin:
    u      ugaau           aa    -     A    -      AG    ccucuuaua       u       uc 
gaaa gggaga     auuucgaaagc  uaGG AAUGG UGGU UAGGAG  aacu         uauuucu caucuuc  c
|||| ||||||     |||||||||||  |||| ||||| |||| ||||||  ||||         ||||||| |||||||   
cuuu cccucu     uaaagcuuuug  AUCC UUACC ACCA AUCCUU  uuga         gugaagg guagagg  g
    u      ---uu           gc    C     C    U      gg    --------c       u       cc 


mirna_id: vvi-MIR3634
hairpin:
    u     uu g       u       AU      --        -aa   gu 
aggg ggagu  u ugaagcu auGGCAU  GUGUGA  CGGAAAGA   ggu  u
|||| |||||  | ||||||| |||||||  ||||||  ||||||||   |||   
uccc ccuca  a acuuugg UGCCGUA  CACGCU  GCCUUUcu   cua  u
    u     cu g       u       CU      CA        gua   aa 


mirna_id: vvi-MIR3633b
hairpin:
      ag  cc               -     U     ---    --cuu      a 
ucccgg  gc  augGGAAUGGGUGGC UGGGA CUAau   guuu     cacauc u
||||||  ||  ||||||||||||||| ||||| |||||   ||||     |||||| g
agggcc  ug  uAUCCUUACCUACCG ACCCU Gguug   cgaa     guguag u
      cu  -c               U     U     agu    aaacu      a 


mirna_id: vvi-MIR3635
hairpin:
         a                       g            g   -  c     agugug 
aauaacaag aGGCAUGUGUGGGGCAUAAUAGa aaugcaaagaaa ggu ug uauug      a
||||||||| ||||||||||||||||||||||| |||||||||||| ||| || |||||      u
uuauuguuc UCCGUACACACCCUGUAUUAucu uuacguuuuuuu cca ac guaac      a
         C                       g            a   u  a     aggguu 


mirna_id: vvi-MIR3636
hairpin:
           uc  aua         GU                 U      ---u     aug       g 
uaauuuauuug  ga   gacucuUCG  UUGCUUCUUUGAUAGAU Caguga    auguc   uaauuuu u
|||||||||||  ||   |||||||||  ||||||||||||||||| ||||||    |||||   |||||||  
guuaaguagac  cu   cugaGAGGC  AACGAAGAGGCUGUCUG gucauu    uacag   auuaaaa u
           uu  ---         UG                 u      uauu     -ga       c 


mirna_id: vvi-MIR3637
hairpin:
u    ug   a   u  ga    u                                                uguuuggauaguuugauuuugaaacugac 
 gaca  aug cau au  guaa auuuuauaaaauuaaggguAUUUAUGUAUUGUGUUUUGUCGGAaaaua                             a
 ||||  ||| ||| ||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||                              
 cugu  uac gua ug  uauu uaaaauauuuuaauucucguAAAUACGUAACACAGAACAGCUUUuuau                             u
g    gu   c   -  ag    -                                                cauaauagguuauuaugucagccuuauau 


mirna_id: vvi-MIR3638
hairpin:
          a            c         -                   g                      C                   auauau 
auauaaugau aauaauaaacug uguaacuac uuuauuuuuuguuugccuu ggugcuuuggUGUGCCUUUUCG GCUUGUUGCUAauauauau      a
|||||||||| |||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||       
uauauuacua uuauuauuugac acauugaug aaauaaaaaacaaacggga ccacgaaaCCACACGGAAAAGU CGAACAACGauuauauaua      g
          c            a         g                   g                      A                   aaaacg 


mirna_id: vvi-MIR3639
hairpin:
  u       uc   u   --         auacacga g      cg           c      a    -                  A                  aa 
gu caaaagc  uug uga  auaacaaug        u aagcuu  uuauaaaaaaa uuuuaa accu guuuggAUUGACUUCUGA AGGCUAAAAGCucuuauu  g
|| |||||||  ||| |||  |||||||||        | ||||||  ||||||||||| |||||| |||| |||||||||||||||||| ||||||||||||||||||  c
ca guuuucg  aac acu  uauuguugc        a uuugaa  aauauuuuuuu aaaauu ugga caaaccuaACUGAAGACU UUCGGUUUUCGAGaauaa  u
  u       -c   u   au         ------aa g      au           -      c    a                  C                  au 


mirna_id: vvi-MIR3640
hairpin:
        u g     c   c  a c          a  cc                          c       aaaggguaucuuucgauccuauag 
ggguauaa g aaugg acc ga g uguacacgug ca  ACCUGAUUGGUGAUGCUUUUUUGGua auauuga                        u
|||||||| | ||||| ||| || | |||||||||| ||  |||||||||||||||||||||||||| |||||||                        a
cccauauu u uuacu ugg cu c acgugugcac gu  uGGACUAACUACUACGGAAAAGCUAu uaugacu                        u
        u g     c   a  - a          c  aa                          c       auauucguaugaggcccaaacuag 


mirna_id: dme-mir-3641
hairpin:
--------- UG    U  U     C  Cu   auauuu 
         G  AGUG CC GUUUA AG  ggu      u
         |  |||| || ||||| ||  |||       
         C  UCAC GG CAAAU Uc  ccg      u
gacauCUCA CU    U  U     C  --   aaaagc 


mirna_id: dme-mir-3642
hairpin:
-----------GU   UG -  C C   GAG     --uu   a 
             GAG  G GU G ACG   CGUca    ugg a
             |||  | || | |||   |||||    ||| u
             CUC  C CA C UGC   Gcagu    acc u
gacauuagcUCUU   GU U  - U   AAA     cggu   c 


mirna_id: dme-mir-3643
hairpin:
--------------GU    U  UC   A    C C   u 
                GAGU UA  UAA UAUG C auu a
                |||| ||  ||| |||| | |||  
                CUCG AU  AUU AUAC g uaa u
gacguuccucaaUUUC    U  UU   C    U a   c 


mirna_id: dme-mir-3644
hairpin:
---------   AG   U         A     a 
         GUG  UGA UAUGGUUUA GUAau c
         |||  ||| ||||||||| |||||  
         CAC  AUU AUAUCAAAU Cauua g
gauucuUAU   CA   U         A     a 


mirna_id: dme-mir-3645
hairpin:
-----------------------------------------------G       A    G    UUGc       uuuacuguuuacgauc 
                                                UGAGUGC GGCU UUUA    ggcgcug                g
                                                ||||||| |||| ||||    |||||||                c
                                                ACUCACG CCGA AGGU    ccgcggc                a
gacgccccucucucucuccccuuucuuuccuuuuguuacuuccuuUGA       A    -    --UU       cuuucgcgugaagguc 


mirna_id: hsa-mir-3646
hairpin:
u     a                      ug   ---a   u 
 ucagu gguuggguucauuucauuuuca  aca    ccc a
 ||||| ||||||||||||||||||||||  |||    ||| u
 aguuA CCGACCCGAGUAAAGUAAAAgu  ugu    ggg a
a     C                      gu   aaaa   u 


mirna_id: hsa-mir-3648
hairpin:
     ---cu     -     u  u     gA            G  GA    -           -c     -   -       u   --    g 
cgcga     gcggc ggcgg gg ggggg  GCCGCGGGGAUC CC  GGGc cggucggccgc  ccggg ugc cgcgcgg gcc  gccg c
|||||     ||||| ||||| || |||||  |||||||||||| ||  |||| |||||||||||  ||||| ||| ||||||| |||  ||||  
gcgcu     cgccg ccgcc cc ucccc  cggugccccugg gg  cucg gccggcuggcg  ggccc gug gcgcgcc cgg  uggc g
     cuuuc     g     -  u     ug            -  ag    c           uc     u   u       c   ag    g 


mirna_id: hsa-mir-3649
hairpin:
       ---a    ca       g   cca  u 
gcuugga    cagg  ccugugu ugc   ag g
|||||||    ||||  ||||||| |||   || u
cGAAUCU    GUCC  GGAcaca acg   uc u
       GUGA    AG       a   --a  u 


mirna_id: hsa-mir-3650
hairpin:
   -         U -         -ga u 
uca AGGUGUGUC G UAGAGUCCu   c g
||| ||||||||| | |||||||||   | c
agu uuuacacgg c gucucgggg   g g
   c         u u         acc u 


mirna_id: hsa-mir-3651
hairpin:
  u  g   gg   uagcaauccu      uau  -    a       uc 
ga uc aug  cca          gugauu   gc augg ggcugcu  u
|| || |||  |||          ||||||   || |||| |||||||  c
cu AG UAC  GGU          CGCUGG   CG UACc ucgacga  c
  u  -   AU   ----------      -CC  A    g       cu 


mirna_id: hsa-mir-3652
hairpin:
CG  U   G  -  -    A    -a     -     --gggg    gag      cc  c a  -g   g 
  GC GGA GU GU GAGG uccg  accca ggggu      ggug   gcggcu  ug g uc  aag g
  || ||| || || |||| ||||  ||||| |||||      ||||   ||||||  || | ||  |||  
  cg ccu cg cg cucc gggu  ugggu ucccg      ccgc   cgccgg  ac c ag  uuc g
--  u   g  u  u    -    cg     g     ggagua    --a      cc  u -  ag   a 


mirna_id: hsa-mir-3653
hairpin:
   c      ccccu          c ugaugauu      ccu   cac     ugaug 
ucc ugggga     ggcagccccu c        cuucuu   gag   gcuca     a
||| ||||||     |||||||||| |        ||||||   |||   |||||      
agg accccu     ucgucgggGA G        GAAGAA   Cuc   cgagu     g
   a      -----          A --UCAGUU      --U   ---     caaac 


mirna_id: hsa-mir-3654
hairpin:
u  a g    gcaa   ca  a     a 
 uc u agcu    ucu  uc cugga u
 || | ||||    |||  || |||||  
 AG A UCGA    AGG  AG gaccu g
A  G G    --AC   UC  c     u 


mirna_id: hsa-mir-3655
hairpin:
   - G     G       GC     ga ac  ga      g 
GCU U UCGCU CGGUGUU  Uguug  g  uc  uuguug u
||| | ||||| |||||||  |||||  |  ||  ||||||  
uga a agcga gccguaa  acaau  c  ag  agcgac g
   u g     g       -a     ag -a  aa      a 


mirna_id: hsa-mir-3656
hairpin:
     g   agcggga g       ag       ag 
cuuuc gcc       c gcauccg  gugggcu  g
||||| |||       | |||||||  |||||||  c
ggagG UGG       G CGUGGGC  ugcccgg  u
     G   ------G G       GG       gc 


mirna_id: hsa-mir-3657
hairpin:
       ca      a   a                              --      g 
ugugucc  uaauua aua ugaaaucugaaaucaccaauaaugggacac  uaaugu a
|||||||  |||||| ||| ||||||||||||||||||||||||||||||  |||||| u
auacagg  auuagu uau acuuuagacuUUAGUGGUUAUUACCCUGUG  guugua u
       -a      a   -                              Uu      a 


mirna_id: hsa-mir-3658
hairpin:
   -UU       CACCAU      g   u 
uaU   AAGAAAA      GGAGAU aaa g
|||   |||||||      |||||| |||  
aug   uucuuuu      uuuuua uuu c
   uuu       -----u      g   c 


mirna_id: hsa-mir-1273e
hairpin:
u     a    aa     -  -A       AAG     gc       a  -  a 
 gaggc ggag  UUGCU UG  ACCCAGG   UGGAg  ugcagug gc cg g
 ||||| ||||  ||||| ||  |||||||   |||||  ||||||| || ||  
 cucug ccuc  agcga ac  ugggucc   accuc  augucac cg gc a
a     a    ag     c  ag       --g     --       -  a  u 


mirna_id: hsa-mir-3659
hairpin:
uc    a                       c       a    -   cu 
  uaca gcagauacaaggaugcccuugua acaacac cgug cug  u
  |||| ||||||||||||||||||||||| ||||||| |||| |||   
  gugu ugucuguguuccuACGGGAGCAU UGUUGUG GUac gau  g
gu    g                       C       A    a   au 


mirna_id: hsa-mir-3660
hairpin:
gaa   aga   g      a                   u   -a   g 
   aga   acu gacaaa uuaaaaugcucuucuguca ugu  aua u
   |||   ||| |||||| ||||||||||||||||||| |||  ||| u
   ucu   uga cuguuu AGUUUUACGAGAGGACAGU Acg  uau c
ucg   gug   a      c                   C   gg   a 


mirna_id: hsa-mir-3661
hairpin:
caccuuc    a    cu  U    -UG   C   GA      cuu  a 
       ucgc gagg  cu GACC   GGA UCG  CAGCUG   gc c
       |||| ||||  || ||||   ||| |||  ||||||   ||  
       agug uucc  ga cugg   ccu agc  gucgac   ug u
uuccaca    g    uc  c    uca   -   uc      --u  c 


mirna_id: hsa-mir-3662
hairpin:
----------      uuccucaacgc   -       -    c   c c     cca 
          uguguu           uca caguuac acuu uua u ucaau   u
          ||||||           ||| ||||||| |||| ||| | |||||    
          acacga           aGU GUCAGUG UGAG AGU A AGuua   u
aaccgacuaa      -----------   A       A    U   A A     uac 


mirna_id: hsa-mir-3663
hairpin:
---   ggga         a      -      C             -   u 
   ccc    ccuuggucc ggcGCU GGUCUG GUGGUGCUCGGgu gga a
   |||    ||||||||| |||||| |||||| ||||||||||||| |||  
   ggg    ggaaccagg cCGCGG CCGGAC CACCACGAGUcua ucu a
cuc   ----         g      G      A             g   g 


mirna_id: hsa-mir-3664
hairpin:
cuguaa  -                       C    A    Uac   cc 
      ac uugaagguagggAACUCUGUCUU ACUC UGAG   cuu  a
      || ||||||||||||||||||||||| |||| ||||   |||  a
      ug aacuuccaucccUUGAGACAGAA UGAG ACUC   gag  c
--uagg  u                       A    G    -Uc   ca 


mirna_id: hsa-mir-3665
hairpin:
---  -  -   gc   -  --c     c   -     G       -  -      g 
   gc gg gcg  ggc gg   ggcag agc AGCAG UGCGGGG CG GCGgcc c
   || || |||  ||| ||   ||||| ||| ||||| ||||||| || |||||| g
   cg cc cgc  ucg cc   ucguc uug ucguc acgccuc gc cgccgg c
ccu  a  a   gu   a  ucu     -   c     g       a  u      u 


mirna_id: hsa-mir-3666
hairpin:
aguaa    --cg     --u  a  -      C  U   A    -      -C     cg 
     gguc    ucagu   gu au gagacc AG GCA GUGU AGAUGC  GAcuc  u
     ||||    |||||   || || |||||| || ||| |||| ||||||  |||||  g
     uuag    aguua   ca ug cucugg uc cgu caca uuugcg  uugag  g
----g    auua     ucu  c  u      -  -   -    c      ac     ac 


mirna_id: hsa-mir-3667
hairpin:
u                 U   GA         gcu 
 gaggaugAAAGACCCAU GAG  GAAGGUucu   g
 ||||||||||||||||| |||  |||||||||    
 cuccuacUUUCUGGGUA CUC  CUUCCAaga   g
a                 C   UC         guc 


mirna_id: hsa-mir-3668
hairpin:
           -                  a    cu 
auauaugaAAU GUAGAGAUUGAUCAAAAU guuu  a
||||||||||| |||||||||||||||||| ||||   
uauauauuuua cgucucuaacuaguuuug uaaa  u
           a                  a    ac 


mirna_id: hsa-mir-3669
hairpin:
          a g a        a g a          a 
auauauauau c g auauauau c g auauauauau c
|||||||||| | | |||||||| | | |||||||||| g
uauauAUAUA G C UAUGUAUA G C uauauauaua g
          A G A        A G A          a 


mirna_id: hsa-mir-3670-1
hairpin:
      -cu  u       cuuuug    -    c 
ucuaga   gg auagcug      gagc cuca c
||||||   || |||||||      |||| |||| u
agAUCU   CC UGUCGAC      CUCG GAgu g
      CUU  -       -----A    A    c 


mirna_id: hsa-mir-3671
hairpin:
augu   ug    -u   -   acauuuac   a          u 
    uau  cugc  gcu guc        aug aaauaaaaug a
    |||  ||||  ||| |||        ||| |||||||||| a
    aua  gACG  UGA CAG        UAu uuuauuuuau a
---u   gu    UC   U   GAAUAAAC   c          u 


mirna_id: hsa-mir-3672
hairpin:
            c           UG           agac 
ucuuugugauua cAUGAGACUCA  UAAAACAUCUU    u
|||||||||||| |||||||||||  |||||||||||     
agaaacacuaau guacucugagu  auuuuguagaa    a
            a           --           cauu 


mirna_id: hsa-mir-3673
hairpin:
             gaa          gaa              gaa   a 
auauauauauaug   uguauauacg   uauauauauauaug   ugu u
|||||||||||||   ||||||||||   ||||||||||||||   |||  
uauauauauauAU   GCAUAUAUGU   GUAuauauauauau   gca a
             AAG          AAG              aag   u 


mirna_id: hsa-mir-3674
hairpin:
      cu U       C  AA  UU  C      
acauca  A UGUAGAA CU  GA  GG Cguuu 
||||||  | ||||||| ||  ||  || |||| g
uguagu  u acguuuu ga  cu  cc guaga 
      cu u       u  -a  uu  u      


mirna_id: hsa-mir-3675
hairpin:
    gaua    A     --C    G       -   u 
ggau    aguU UGGGG   UUCU UAGAGAU UUC a
||||    |||| |||||   |||| ||||||| ||| u
cuua    ucaA ACCCC   AAGG AUCUCUA aag g
    --ag    -     CUC    A       C   a 


mirna_id: hsa-mir-3676
hairpin:
u    u      cc  ucua u     -    --   -     UU 
 uggu aaagcg  ug    g aaacA GGAG  AUC CUGGG  c
 |||| ||||||  ||    | ||||| ||||  ||| |||||  g
 accg UUUCGC  AC    C UUUGU CCuc  ugg gaccc  a
a    u      --  --CC C     G    cg   c     ua 


mirna_id: hsa-mir-3677
hairpin:
   A             ------U  -A      
ggC GUGGCCAGAGCCC       GC  GUGcu 
||| |||||||||||||       ||  |||| g
CCG CACCGGUCUCGGG       cg  uacgg 
   G             UGCUCuu  gg      


mirna_id: hsa-mir-3678
hairpin:
                        U   uugaau   ug      uu 
gaauccggUCCGUACAAACUCUGC GUG      gau  gugagu  g
|||||||||||||||||||||||| |||      |||  ||||||   
cuuaGGCCAGGCAUGUUUGAGACG Cac      uua  uacucg  u
                        U   --uaag   gu      uu 


mirna_id: hsa-mir-3679
hairpin:
            --A   CA          guuu 
cguggUGAGGAU   UGG  GGGAAGGGGA    c
||||||||||||   |||  ||||||||||    c
guaCUACUUCUA   ACC  CCCUUCccuu    c
            AUG   -C          aucu 


mirna_id: hsa-mir-3680-1
hairpin:
             G  UC    A    A UG      u  aa 
aaauuuaaggagg AC  ACUC CAGG U  UGCAaa gc  a
||||||||||||| ||  |||| |||| |  |||||| ||  g
uuuaaauuccucc uG  UGAG GUCC A  ACGUUU cg  u
             g  GA    G    C GU      U  gu 


mirna_id: hsa-mir-3681
hairpin:
                  U     C      g  c 
acuuccagUAGUGGAUGA GCACU UGUGCa gg c
|||||||||||||||||| ||||| |||||| ||  
ugaaggUCAUCACCUACU CGUGA ACAcgu uc a
                  U     C      g  a 


mirna_id: hsa-mir-3682
hairpin:
            g                       a   a 
uaaguuauauau uCUACUUCUACCUGUGUUAUCAU aua a
|||||||||||| ||||||||||||||||||||||| |||  
auucaauauaua aGAUGGAGGUGGACAUAGUAGUa ugu g
            a                       c   g 


mirna_id: hsa-mir-3683
hairpin:
           cc   C  C    GAA        Aucuc 
ggguguacacc  cUG GA AUUG   GUAGUAUC     u
|||||||||||  ||| || ||||   ||||||||      
cccacaugugg  gac cu uaac   caucguag     c
           aa   a  a    aag        guucc 


mirna_id: hsa-mir-3684
hairpin:
            c                  uugag 
aaucuaaaggac uguacuagguuuaacaug     c
|||||||||||| ||||||||||||||||||      
uuagauUUCCUG ACAUGAUCCAGAUUguac     a
            C                  ucauu 


mirna_id: hsa-mir-3685
hairpin:
    a   -    -   UA  UG      uga 
guac UUU CCUA CCC  CC  AAGACU   g
|||| ||| |||| |||  ||  ||||||   a
caug aaa gggu ggg  gg  uucuga   u
    -   c    a   --  gu      uau 


mirna_id: hsa-mir-3686
hairpin:
        a         c                 u   ug 
cucaccuc uucauuuac uucucuuacagaucacu uuc  c
|||||||| ||||||||| ||||||||||||||||| |||   
gaguggag aAGUAAAUG AAGAGAAUGUCUAguga agg  a
        a         A                 c   uc 


mirna_id: hsa-mir-3687
hairpin:
       g   c       -g c    ug   
cgcgcgu cgc cgagcgc  g ccgg  gu 
||||||| ||| |||||||  | ||||  | c
gugUGCA GCG GCUUGCG  C GGCC  cc 
       -   U       GA A    Cu   


mirna_id: hsa-mir-3688-1
hairpin:
          c                          au   ugua 
ucuucacuuu aagAGUGGCAAAGUCUUUCCAUAUgu  gua    u
|||||||||| ||||||||||||||||||||||||||  |||    g
agaagugaaa uUCUCACCGUUUCAGAAAGGUAUaca  cau    u
          u                          --   uguc 


mirna_id: hsa-mir-3689a
hairpin:
  ug    g GU         G    UG     ug ga 
cc  ggag U  GAUAUCAUG UUCC  GGAgg  u  u
||  |||| |  ||||||||| ||||  |||||  |   
gg  ccuU G  CUAUAGUGU GAGG  Ccuuc  g  c
  gu    G UG         G    GU     gu uc 


mirna_id: hsa-mir-3690-1
hairpin:
       c   C   AC    C     CAAA   gug 
cccaucu cAC UGG  CCAG GUAGA    Gag   u
||||||| ||| |||  |||| |||||    |||   u
ggguaga gug acc  gguc caucu    cuc   u
       u   -   ca    -     auac   auc 


mirna_id: hsa-mir-3691
hairpin:
u            u  U        G     C   A      gc 
 ugaggcacuggg AG GGAUGAUG AGACU GGU Cccacu  u
 |||||||||||| || |||||||| ||||| ||| ||||||   
 acuccgugacuc UC CCUACUGC UCUGA CCA gggugg  g
a            C  U        G     A   g      ga 


mirna_id: hsa-mir-3692
hairpin:
     C    -UG     GA     U    gag a 
ccauu CUGC   GUCAG  GUGGA ACUG   c a
||||| ||||   |||||  ||||| ||||   |  
ggUGA GACG   CAGUC  CACCU UGac   g u
     A    UCA     -A     -    aua a 


mirna_id: pab-MIR950
hairpin:
                                                                                                                                                                                                                                                                                                           gaag cga  guguu uugucgUCU GGCC CGGUGGUUU UGA cgucu 
                                                                                                                                                                                                                                                                                                           |||| |||  ||||| ||||||||| |||| ||||||||| ||| |||| a
                                                                                                                                                                                                                                                                                                           uuuc gcu  cauaa aacagcaga ccgg gccaccaag acu guagg 
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aagauaaacuccucaguucaaacggcucuagguacauucg    u   cc     g         a    u         -   u      


mirna_id: pab-MIR3693
hairpin:
        A      GC      A             gcggcugcacagaggccuuacucaa 
gcccuuca GAGGGU  UCAUGA CUGCUCauaggug                         a
|||||||| ||||||  |||||| |||||||||||||                         c
cgggaagu cuucca  aguacu gacgaguaucuac                         a
        -      ac      c             guucaaacgagguaaacccgagaac 


mirna_id: pab-MIR3694
hairpin:
aaa      -    g  ugauu   ----a        a 
   gaagcc cauu gc     ccc     cauuauua a
   |||||| |||| ||     |||     |||||||| u
   cuUCGG GUGG CG     GGG     gugaugau u
-ua      C    G  ----U   AAUUA        u 


mirna_id: pab-MIR3695
hairpin:
agc  u  U                      g                     gu 
   cc ca UGUCGCCUGGUCGUUGUGGGgg uugaugaucguuacuagaaaa  g
   || || |||||||||||||||||||||| |||||||||||||||||||||   
   gg gu acagcggaccggcaacauucuc aacuacugguaaugaucuuuu  a
uca  c  u                      g                     ga 


mirna_id: pab-MIR3696
hairpin:
guuuuC    UA       GAC        aauacuaccuggaauucaacauccagaaaggaauu 
      GAGC  CCAUCGU   GAUCcauc                                   c
      ||||  |||||||   ||||||||                                    
      cucg  gguagca   uuggguag                                   c
-----a    ua       aaa        guaauuaucgggcgcggauuagcgauacucuucac 


mirna_id: pab-MIR3697
hairpin:
aga   c    uuaauaa      CC                   a   aa 
   agg gcga       uggUAG  CCUGACUUCAACAUGAGga gag  g
   ||| ||||       ||||||  ||||||||||||||||||| |||   
   ucc cguu       acuauc  ggacugaaguugugcuucu cuc  c
-ug   u    -------      -u                   c   ga 


mirna_id: pab-MIR3698
hairpin:
   g    u              CUUG        g  -ac   cucu  c 
ucu gcug aCUUGCAACUCUGC    GCUUAugg ag   gcu    gc u
||| |||| ||||||||||||||    |||||||| ||   |||    ||  
aga cgac ugaacguugagaug    cggauacc uc   cga    cg u
   a    c              -aaa        g  aca   uauu  a 


mirna_id: pab-MIR3699
hairpin:
---g     gcaaa     -    -g      g u  c  uu 
    uucca     agggc aaag  ugucuu u uc ag  g
    |||||     ||||| ||||  |||||| | || ||   
    gaggu     ucCUG UUUC  AUAGAA A AG uc  u
caaa     ----a     G    AG      G C  u  uu 


mirna_id: pab-MIR3700
hairpin:
  a  gau       g  --a     -a  cg     uu 
gg au   ugaucuu ag   ugggu  cu  uggug  a
|| ||   ||||||| ||   |||||  ||  |||||  u
cc ua   ACUGGAA UC   ACCCG  Ga  accac  g
  a  aau       G  AAA     CA  au     cg 


mirna_id: pab-MIR3701
hairpin:
-ug   c   c       aa           c           cu ug   c            -au        auuaucgucaucaaaugaaaag 
   cca aga gaagggu  gcguuguuugg agaagaguuuu  c  uug agaacauagagg   uugccaaa                      g
   ||| ||| |||||||  ||||||||||| |||||||||||  |  ||| ||||||||||||   ||||||||                      c
   ggu uCU CUUCCCA  CGUGACAAAUu ucuucucaaaa  g  agu ucuuguaucucc   aacgguuu                      u
aca   c   A       CC           c           au ua   u            gau        guuuaacguuauuucgaugacc 


mirna_id: pab-MIR3702
hairpin:
  g     UCU    GC     C                -a  ggaugcc   a 
ac cAAUC   UGGU  UUAUU GCaaucauggcugugg  uc       ugg a
|| |||||   ||||  ||||| ||||||||||||||||  ||       |||  
ug guugg   auca  aguaa cguuaguaccggcacu  ag       auc c
  a     uac    --     u                ag  aagcaaa   a 


mirna_id: pab-MIR3703
hairpin:
             U  A    -    -GUCC     uaauauuugaauaacugguugaaaag 
uuuacaagUAGAC CU UCAG CCUU     ugaua                          u
||||||||||||| || |||| ||||     |||||                           
agauguuuauuug ga gguu ggga     acuau                          u
             c  -    a    aauuc     uaccguuagguaccguccguagauuu 


mirna_id: pab-MIR3704
hairpin:
     -aaua     A  U    UU         guaaca    cuaua    a  -a    ag 
aaggc     GGUCU GG GGAG  GGAAAAAcu      augc     ucac uc  gauc  a
|||||     ||||| || ||||  |||||||||      ||||     |||| ||  ||||   
uuccg     ccaga cc ccuc  ccuuuuuga      uacg     agug ag  cuag  u
     gugac     c  u    -u         -----g    ---uc    -  ca    ag 


mirna_id: pab-MIR3705
hairpin:
uuuu      --          AU    UGGAC   --    aguuuaacgggugagaccuccaacucc 
    gcagac  GUAAGUGGUU  GAUC     ggc  ggca                           c
    ||||||  ||||||||||  ||||     |||  ||||                           u
    uguuug  uauuuauuag  uugg     ccg  ucgu                           c
aguu      uu          cu    --uau   uu    aguauauauuauauaagauagguaucu 


mirna_id: pab-MIR3706
hairpin:
-    augaca   a    g   gg       -----------       gu 
 gcaa      guu uauu cau  uuucgga           ggaaugg  a
 ||||      ||| |||| |||  |||||||           |||||||   
 cguu      cAG AUAG GUA  GAGGCUU           ucuuacc  a
g    ----aa   A    -   AA       Ugguacguuac       ag 


mirna_id: pab-MIR3707
hairpin:
-    c  a     -   ----c     uuauagauu   g      ac     au 
 aagc ac uccag uac     aggau         ugg agauug  uuaua  g
 |||| || ||||| |||     |||||         ||| ||||||  |||||   
 uucg ug agguu aug     UCCUA         ACC UCUAGU  Agugu  a
g    -  -     u   aaAGU     -------UU   G      --     ac 


mirna_id: pab-MIR3708
hairpin:
    a  aau    ----g               auucuggu     acu  cu 
gucc cg   cugg     gcgggaaguguugug        ugaua   ug  g
|||| ||   ||||     |||||||||||||||        |||||   ||   
cggg gc   gacc     UGCUCUUUACAACAC        ACUau   ac  a
    a  --c    gcACA               --------     -gu  ua 


mirna_id: pab-MIR3709a
hairpin:
---       a  a                 U     ca     uugcga 
   aaauuca ga uuUCAGAUGCUUUAAAU CCCGA  gauuc      u
   ||||||| || ||||||||||||||||| |||||  |||||      g
   uuuaggu cu gaaguuuacgaaauuua gggcu  uuagg      a
gua       -  c                 -     --     uaaacc 


mirna_id: pab-MIR3709b
hairpin:
---       a             C      U     --uaa    a  cg 
   aaaucca gaacUUUAAAUGC UUAAAU CCCGA     auuc gg  a
   ||||||| ||||||||||||| |||||| |||||     |||| ||   
   uuuaggu cuugaaguuuacg aauuua gggcu     uaag cc  u
cua       -             a      -     uuaua    -  ag 


mirna_id: pab-MIR3710
hairpin:
aga   uucc   cuc   ug   acc  ac      -c  aag        uua   -auu  -  c    
   agc    aga   ggu  gga   ug  gggccu  ca   ucuuaacc   ucu    gc uc gcc 
   |||    |||   |||  |||   ||  ||||||  ||   ||||||||   |||    || || || c
   ucg    ucu   cca  ucu   AC  UCCGGG  GU   AGGGUugg   aga    cg ag cgu 
---   -uuu   uuu   gu   gaa  -C      CA  CCA        cuc   ccuu  c  a    


mirna_id: pab-MIR3711
hairpin:
aaa   CG   GAAG     CC   --aa     --       acgaggcagucguaagacuccuccacc 
   UGG  CUA    GAGGG  Uga    auuau  uaauggc                           a
   |||  |||    |||||  |||    |||||  |||||||                            
   acc  gau    cuccc  acu    uagua  auuacug                           c
---   aa   -aaa     -c   acaa     aa       aagaaaagugauauccacucaccaacc 


mirna_id: pab-MIR3712
hairpin:
---ga     -  U    AUC     AC     c u 
     gaUGU GA CAAG   AGACU  CAaau c a
     ||||| || ||||   |||||  ||||| |  
     cuaua cu guuc   ucugg  guuua g c
accua     a  c    auc     -a     c a 


mirna_id: pab-MIR160a
hairpin:
aa   uu         C       C    U     a  ca     c     u 
  agg  gaugugUGC UGGCUCC UGUA GCCAc ua  aggcc aguca a
  |||  ||||||||| ||||||| |||| ||||| ||  ||||| ||||| u
  uuc  uugcauacg accgagg acau cggug au  uucgg uuagu g
ca   uu         a       a    u     g  ac     -     u 


mirna_id: pab-MIR160b
hairpin:
     gg   cc  uua     C      C  G       u   c uu  u    aag 
guugg  gca  gc   ucUGC UGGCUC CU UAUGCCA cug g  gc uauc   a
|||||  |||  ||   ||||| |||||| || ||||||| ||| |  || ||||    
cgauc  ugu  cg   agacg accgag ga auacggu gac c  cg auag   g
     uu   --  uca     a      a  g       u   a uc  u    ggc 


mirna_id: pab-MIR166a
hairpin:
    a   u   u          cua     cu   g u  ccu 
ggag ucu ggu gaggggaaug   ucugg  cga g cg   u
|||| ||| ||| ||||||||||   |||||  ||| | ||    
ccuu agg uca cuCUCCUUAC   GGACC  GCU c gc   c
    c   u   u          UUC     AG   g u  uuc 


mirna_id: pab-MIR166b
hairpin:
---------------------uuuca     g    a c         a     gu a         gaa   a 
                          gaguu ggau u gggaaugaa ccugg  c agaugauuu   ggc g
                          ||||| |||| | ||||||||| |||||  | |||||||||   ||| g
                          cucaa ccua g UCCUUACUU GGACC  G Ucuauuaga   uug c
aaaaguuaacucgucgucaugaauuu     a    c U         C     AG C         -ag   u 


mirna_id: pab-MIR482d
hairpin:
       aa      C     -UA        ------   u   -   uau 
aaggcca  GGCUUG GAGGA   GGAAAAAc      ucg gug gug   u
|||||||  |||||| |||||   ||||||||      ||| ||| |||    
uuccggu  ccgaac cuccu   ccuuuuug      agc cac cac   u
       ac      c     cac        acaucu   -   u   ucu 


mirna_id: pab-MIR395
hairpin:
cucaca  u     -uca     g             u       cc   -uc g 
      gc gguuc    augcc ggaguuccuucaa cacuucg  gaa   c a
      || |||||    ||||| ||||||||||||| |||||||  |||   |  
      cg ucaag    ugcgg cUUCAAGGAGGUU GUGAAGU  cuu   g a
------  -     ucac     g             U       Ca   uac a 


mirna_id: pab-MIR396a
hairpin:
-aauc     -   cuc                 A  Aa   uc     g 
     ccgcc aug   UUCCACAGCUUUCUUGA CU  gag  gaucg a
     ||||| |||   ||||||||||||||||| ||  |||  |||||  
     ggcgg uac   agggugucgaaagaacu ga  cuu  cuggc u
gcuua     g   aaa                 c  ga   ga     c 


mirna_id: pab-MIR396b
hairpin:
--  -                       A   acu    ga  a         -----    c 
  uc auaguuUUCCACGGCUUUCUUGA CUU   ucac  uc ggucuguug     gcgg c
  || ||||||||||||||||||||||| |||   ||||  || |||||||||     ||||  
  ag uauuaaagggugccgaaagaacu gaa   agug  gg cuagacaau     cgcu g
gg  a                       a   --c    --  c         agcua    a 


mirna_id: pab-MIR396c
hairpin:
aagccgga    g    --c          -             A    ccg  -    ag        acag 
        gaau cucu   auauuuUUCC ACGGCUUUCUUGA CUUc   au cggg  uguuggcg    a
        |||| ||||   |||||||||| ||||||||||||| ||||   || ||||  ||||||||    u
        cuua ggga   uauaagaagg ugccgaaagaacu gaag   ua gccu  acaaucgc    c
uauuuuaa    -    aau          g             c    -ca  c    ag        cacg 


mirna_id: pab-MIR397
hairpin:
      -     c  c  C           C          -----gaa       c       uu     
agccgu ggcaa ca aU AUUGAGUGCAG GUUGACGaua        auuccac aauagau  gaua 
|||||| ||||| || || ||||||||||| ||||||||||        ||||||| |||||||  ||| a
ucggua ccguu gu ug uaacucacguc caauuguuau        uaaggug uuaucua  cuau 
      a     u  a  a           c          aguuaccg       u       -u     


mirna_id: pab-MIR482a
hairpin:
--------------uugg        a    -     u       cgguuaa     ---ucu  uucaau 
                  aggagugg agga uaggg aagacug       gugag      gc      a
                  |||||||| |||| ||||| |||||||       |||||      ||       
                  uCCUUACC UCCU AUCCC UUCUgac       cacuc      cg      a
uugacacuacuuccguug        C    C     -       -------     uaaucu  uuucuu 


mirna_id: pab-MIR482b
hairpin:
-----     -      a  cuug    u        -    a        uuug uuaa   uc 
     augug gaugga gu    agga ugggagga uagg gaaggcug    c    uuc  a
     ||||| |||||| ||    |||| |||||||| |||| ||||||||    |    |||   
     uacac cuaccu cg    uCCU ACCCUCCU AUCC CUUCUgau    g    aag  g
uuccc     a      c  -uua    U        U    -        --ua ucca   uu 


mirna_id: pab-MIR482c
hairpin:
ugagaa     u        uuugu  aug      uug           c  -    u       c  cuuu 
      gggaa ggaugugu     gg   gaaguc   aggagugggag ag agga aagacug ug    g
      ||||| ||||||||     ||   ||||||   ||||||||||| || |||| ||||||| ||     
      cccuu ccuacaca     cc   cuucgg   uCCUUACCCUC UC UCCU UUCUgac au    a
--gcaa     c        -----  --a      uua           C  A    -       u  uaua 


mirna_id: pab-MIR535
hairpin:
-------aaauauc    cuauucca        A     -           c  u  u   u      aa 
              cguu        uugcUGAC ACGAG AGAGAGCACGC ug au cuc uauaug  u
              ||||        |||||||| ||||| ||||||||||| || || ||| ||||||  u
              gcga        aacgacug uguuc ucucucgugcg ac ug ggg guauac  u
ucaacucuacguca    --------        a     g           u  c  c   u      gu 


mirna_id: pab-MIR947
hairpin:
---------------------u     g              A    U   u    -------- uca   aa   u  a 
                      guuuu UAUCGGAAUCUGUU CUGU UCu aggc        c   agc  cua gg a
                      ||||| |||||||||||||| |||| ||| ||||        |   |||  ||| ||  
                      cagaa auagucuuagacga gacg aga uccg        g   ucg  ggu cc a
guugcuguuuacgcaacggacu     g              c    c   c    cauacuac ucg   ga   c  u 


mirna_id: pab-MIR951
hairpin:
a                      U       A  -     -------------   uuua 
 ggaagcgaaggUGUUCUUGACG CUGGACC CG ugguu             ugc    a
 |||||||||||||||||||||| ||||||| || |||||             |||     
 cuuucguuuccacaagaacugc gaccugg gc aucaa             acg    g
a                      u       c  u     cuacccuauaaug   uuua 


mirna_id: pab-MIR1311
hairpin:
    u        uua    -c       u               
gggc ugguagga   ggcg  acuggca aacucugaccauag 
|||| ||||||||   ||||  ||||||| ||||||||||||| u
uccg guuauccu   CCGC  UGACCGU UUGAGACUgguauu 
    u        uac    CU       U               


mirna_id: pab-MIR1863
hairpin:
ucuugccaugacagagauuaucuccugaucugcaaaacaaa     agug         -     gc   ag   -ucuu u    c 
                                         uaccu    uaggaucua cgugg  uca  gcu     c ugag u
                                         |||||    ||||||||| |||||  |||  |||     | ||||  
                                         auggg    auuUUAGAU GUACC  AGU  CGA     g acuu u
--------------------------auaacaaaaguaaaa     ----         U     AU   CU   uaccu c    c 


mirna_id: hsa-mir-3713
hairpin:
--                   U 
  GGUAUCCGUUUGGGGAUGG u
  ||||||||||||||||||| u
  ccauagguagaccccuauc c
aa                   a 


mirna_id: hsa-mir-3714
hairpin:
--GAA      A   -  C      gac   cu 
     GGCAGC GUG CU CCCUGU   gug  c
     |||||| ||| || ||||||   |||   
     ccgucg cac ga gggacg   cac  c
cucca      c   a  a      ggc   ua 


mirna_id: ame-mir-11
hairpin:
--a  gag  u      ac     -          g      cu    -ug    c 
   ug   ga agccgu  ccuga uggagcucug cuguga  ugug   uuaa u
   ||   || ||||||  ||||| |||||||||| ||||||  ||||   |||| g
   ac   cu uuggca  ggaUU AUCUUGAGAC GACACU  ACac   aauu a
aca  aaa  -      au     G          G      --    uaa    a 


mirna_id: ame-mir-1175
hairpin:
caa          --------u   c     ----        u  uuc    -    a     -   uua         
   aaauaaauaa         aug aagaa    agggauua gg   aagu ggag agugg ucu   cgcuuuga 
   ||||||||||         ||| |||||    |||||||| ||   |||| |||| ||||| |||   ||||||| a
   uuuguuuauu         ugc uucuu    ucccuagu cc   UUCA CCUC UCACU AGA   GUgaaauu 
--c          uuuuuuuuu   -     auaa        -  uCA    A    C     U   ---         


mirna_id: ame-mir-193
hairpin:
agg    a  a    guaaaug         g       c     ug u  u    u  cug g 
   gucg ag guga       gccgagggu auuuggg cuuag  g cc gugg gg   c u
   |||| || ||||       ||||||||| ||||||| |||||  | || |||| ||   |  
   uagc uc cgcu       cggcucuua ugAACCC GAAUC  C GG CAUc cu   g a
--a    g  g    -------         g       U     GU C  U    -  -aa c 


mirna_id: ame-mir-307
hairpin:
ga   gcauc    aaau       a   gga         ccu    -     ----   --u     u 
  gga     ucga    ggcgguc cgu   cucacucaa   gggu gugau    gcu   gccug g
  |||     ||||    ||||||| |||   |||||||||   |||| |||||    |||   ||||| u
  ccu     agcu    uugucag gca   GAGUGAGUU   UCCA CACUa    cga   cggac a
-a   auacc    -auu       c   AGC         -UU    A     cugg   ucc     u 


mirna_id: ame-mir-2788
hairpin:
ag     a uu     c    ggg          uau c     g   ----   g 
  guugg g  cguug ggca   uugggguuuc   g ggcau ugc    cuu c
  ||||| |  ||||| ||||   ||||||||||   | ||||| |||    ||| u
  caacu u  gcaac cugu   AACCCUAAAG   C CCGUA ACg    gag u
-a     a uc     -    aaA          CUU -     -   uaaa   u 


mirna_id: ame-mir-989
hairpin:
c        --  --     uaa  a         a  g   g   -a c 
 agaaucac  cg  auauu   gu uggguggag ga cgg gag  g a
 ||||||||  ||  |||||   || ||||||||| || ||| |||  |  
 UCUUGGUG  GC  UGUAG   Cg gcccgccuc cu gcu cuu  c a
c        AU  AG     -UG  -         -  -   g   ag a 


mirna_id: ame-mir-3717
hairpin:
uug   a  UG  A      -      G   --G  ug g c    g 
   gag gg  AG GAAAAA GAGAGU UCG   gg  g a guuu a
   ||| ||  || |||||| |||||| |||   ||  | | ||||  
   uuc cu  uc cuuuuu cucuua agc   cu  c u uaaa u
--g   g  gu  -      a      -   aca  gu g -    a 


mirna_id: ame-mir-3745
hairpin:
g   g     --    u     -  acaguu    a  gu   a   guu      cc ucc 
 cac ccggg  gggg guggu cc      gguu cg  gaa cgg   uggcca  g   c
 ||| |||||  |||| ||||| ||      |||| ||  ||| |||   ||||||  |   c
 gug GGCCC  CCCC CACCG GG      ccga gc  cuu guc   gccggu  c   c
a   -     GG    C     U  ----GC    -  ug   a   ---      cu uug 


mirna_id: ame-mir-3746
hairpin:
c      ---    uc      -    a  uuaca    aaua          -         u    a    
 uuucgg   aucu  uucucu gaca gu     guac    uuuucuuugu uuuuuuuuc uuuu uga 
 ||||||   ||||  |||||| |||| ||     ||||    |||||||||| ||||||||| |||| || g
 aaagcu   uaga  aagaga cugU CG     UAUG    AGGAGAGGCG aaagaagag gaaa acg 
a      ccg    -c      g    G  -----    --GA          C         c    c    


mirna_id: ame-mir-3747a
hairpin:
ggc  g                          a 
   cu CGAGGCUUUUUUUCAGCGAUGAauaa a
   || |||||||||||||||||||||||||| a
   ga guucugaaaaaagguugcuacuuguu u
--a  g                          a 


mirna_id: ame-mir-3747b
hairpin:
uac     gc   ------------             C        C        a 
   ccagu  cag            uucUGCGAGAUUU UUUUCAGU GUGaauaa a
   |||||  |||            ||||||||||||| |||||||| |||||||| a
   gguua  guc            aaggcgcucuaaa aaaggucg cacuuauu u
--u     --   uagcacauaaaa             a        u        a 


mirna_id: ame-mir-3748
hairpin:
guc  uua    gugcgg     --a   -      acaga       u u  -a    ag 
   gg   cuuu      ggaga   uaa uuuuac     uggaacg g cg  uagc  u
   ||   ||||      |||||   ||| ||||||     ||||||| | ||  ||||  c
   cc   gaaa      ccuuu   gUU AAAAUG     ACUUUGC C GC  auug  c
--c  ucc    auuaaa     aac   C      ---AA       - U  gg    cu 


mirna_id: ame-mir-3749
hairpin:
gac   uacac           cc     ggag   aaucucga   c 
   cga     gaaggugaaag  ggcca    ccg        gga c
   |||     |||||||||||  |||||    |||        |||  
   gcu     CUUCCACUUUC  CCGGU    GGU        ucu u
aua   ---CC           --     --AA   -cuaaaag   a 


mirna_id: ame-mir-3750
hairpin:
uga  uca  -  U   G       -   AGG    g     cgau      --g   aua   a ag 
   gc   uc ag AAA CUUCAUC AGC   ACUG uuuua    uaaaug   ccu   ggg c  u
   ||   || || ||| ||||||| |||   |||| |||||    ||||||   |||   ||| |   
   ug   ag uc uuu ggagugg uug   uggc aaagu    guuuac   gga   cuc g  g
--a  uua  a  c   a       a   --g    g     --au      aua   -aa   - aa 


mirna_id: ame-mir-3718a
hairpin:
u    -----        -----------------       a         au          uag      --------   a 
 ugaa     agucguuc                 ccgauuu cauuaucgg  caggauaggg   ggcagg        gcc u
 ||||     ||||||||                 ||||||| |||||||||  ||||||||||   ||||||        ||| u
 acuu     ucagcaag                 ggcuaag guGAUAGCC  GUCCUGUCCC   CUgucu        ugg u
u    auuug        uauuaaagcuaagucau       a         CU          ---      uaccaaua   c 


mirna_id: ame-mir-3751
hairpin:
aa g   g    gua  ga     ca    a   ggugg      ga   uuuc a      -  au     a ac 
  u uuu ucgc   uu  ccggc  ucca cgc     cacccc  gaa    g aaacug ca  ugcau g  a
  | ||| ||||   ||  |||||  |||| |||     ||||||  |||    | |||||| ||  ||||| |   
  a gaa agug   gg  GGCUG  AGGU GUG     GUGGGg  cuu    c uuuggc gu  acgua c  g
-g g   a    --a  GG     -A    G   -----      -g   ---- a      a  --     g ga 


mirna_id: ame-mir-3752
hairpin:
-  g    acgaau  c      -gag     a        --aauu     caacgc 
 gu cgca      ag gaagcu    cuaua uuuagaaa      aucga      g
 || ||||      || ||||||    ||||| ||||||||      |||||      u
 cA GCGU      UC CUUUGA    GGUGu aaaucuuu      uagcu      u
c  A    ------  -      AAUA     c        accuuu     uccccu 


mirna_id: ame-mir-3753
hairpin:
-         cga  gg   cg   --C     CG -     -GA    ----  -   c 
 acaacagau   uc  cag  UGU   CGUUU  G GACUC   CCGu    cg gca a
 |||||||||   ||  |||  |||   |||||  | |||||   ||||    || |||  
 uguuguuua   ag  guu  aca   gcaag  c uugag   ggcg    gc cgu a
a         cgg  aa   au   uuc     aa a     aag    uaga  u   u 


mirna_id: ame-mir-3754
hairpin:
a  ug  -   u      --    gauu         CAU     A  AC        -----     -  g 
 ca  ug ugg gucuug  acac    gccggcuuU   GGUGA AA  UCAUUCUU     Uacgu gc c
 ||  || ||| ||||||  ||||    |||||||||   ||||| ||  ||||||||     ||||| ||  
 gu  gc gcu caggau  ugug    uggccgaag   ccauu uu  aguaaggg     gugca cg g
a  ua  u   -      aa    --au         ---     a  --        auaag     a  a 


mirna_id: ame-mir-3755
hairpin:
ca     ucaaaAAUG                U      auc  u 
  uaugu         UGUAUAUAUAAUUAUA CGUGuu   gu c
  |||||         |||||||||||||||| ||||||   || g
  auacg         acauauauauuaauau gcguaa   ca c
-g     ----uuaga                u      -ca  a 


mirna_id: ame-mir-3718b
hairpin:
u   a   agua      cu  c       A     C    ---GA   Aau      ac 
 ucg uuc    ccgauu  ca uaUCGGG CAGGA AGGG     CAG   gguuau  c
 ||| |||    ||||||  || ||||||| ||||| ||||     |||   ||||||   
 agc aag    ggcuaa  gu auagccu guccu uccc     guc   ccggua  g
c   -   ----      au  a       a     a    auccc   ---      aa 


mirna_id: ame-mir-3756
hairpin:
a            --ucau         U                      aaua            u 
 agcauacaaaug      CUGAUUUCU UCAUAAGGAGGAuuucaaaaau    uugcaauauugu u
 ||||||||||||      ||||||||| ||||||||||||||||||||||    |||||||||||| u
 ucguauguuuac      gacuaaaga aguauucuucuuaaaguuuuua    aacguuauaaca u
c            uauuuc         u                      -aaa            u 


mirna_id: ame-mir-3049
hairpin:
u c     uaaaagcaauu    -     uc     U        U     C         gguca 
 g aggag           gaau cgugu  ccagg CGGGAAGG AGUUG GGCGGAUuu     a
 | |||||           |||| |||||  ||||| |||||||| ||||| |||||||||      
 c uccuc           cuua gcgcg  gguUC GCCUUUCC UCAAC CUGCCUgaa     c
u c     -----------    a     gu     U        -     -         aacgu 


mirna_id: ame-mir-3757
hairpin:
--gga    ua     g        a      c   c          - ---uucu     u    a 
     uugg  gaugu aaagagaa gaagaa uga uuuaauaugu c       auuau aaaa u
     ||||  ||||| |||||||| |||||| ||| |||||||||| |       ||||| |||| g
     aacu  uuaua uUUCUUUU CUUUUU AUU AGGUuauaua g       uaaug uuuu c
auaug    --     a        A      U   A          c ucuaauc     u    a 


mirna_id: ame-mir-3758
hairpin:
c    cg u       ---   -       UC  GGAC        
 cugg  g ccauuag   cAG UCAUAUG  CU    CAGGUgg 
 ||||  | |||||||   ||| |||||||  ||    |||||| a
 gacc  c ggugguc   guc aguauac  ga    guccacc 
u    -- -       cug   c       -c  ---a        


mirna_id: ame-mir-3719
hairpin:
a     --------auc  c   guc   u    c     ac     u         a       gaaa  g 
 augga           gg gcg   cac auac gggug  cgaaa gucgcgcaa cuguauu    cg c
 |||||           || |||   ||| |||| |||||  ||||| ||||||||| |||||||    || g
 ugccu           cc cgc   gug ugug cccac  GCUUU CAGUGCGUU GGCAUag    gc a
a     gaaacccccac  a   aaa   -    a     cA     U         A       ---g  u 


mirna_id: ame-mir-3759
hairpin:
-    --a u    g   -    au    -   gg    --ag      g 
 ggcu   c cgga gcu aguu  gacg gag  ucug    agcggg g
 ||||   | |||| ||| ||||  |||| |||  ||||    ||||||  
 ucga   g GCCU UGG UCAG  CUGC CUC  Gggc    uugucc u
c    auc C    G   G    --    A   -A    gugg      u 


mirna_id: ame-mir-3760
hairpin:
aa     a           auuuuc    ucu   -      ----------U        A     A  aaa  a 
  auaaa auuuguuuaau      uuau   uaA AUCAUA           GAAUAAUC UUUCU Ga   au g
  ||||| |||||||||||      ||||   ||| ||||||           |||||||| ||||| ||   || a
  uauuu uaaauagauua      aaua   auu uaguau           uuuauuag aaaga cu   ua g
-a     a           ------    uuu   a      uaaacuuacuu        -     a  --g  a 


mirna_id: ame-mir-3761
hairpin:
-      u       -    --gug     g   g   -A    --C        U      auauuuuuuu 
 cugucu uuucauu auug     gucgu ugg UCG  UUCC   GGGCCUCG GUGUuu          u
 |||||| ||||||| ||||     ||||| ||| |||  ||||   |||||||| ||||||          c
 gauaga aagguag uagc     cagca gcc ggc  aagg   cucggagc uacgag          a
a      u       a    agcga     a   g   aa    aac        -      cuuuucucuu 


mirna_id: ame-mir-3762
hairpin:
ugacuu    a  cg     AUC       ----U     AU          c              a 
      agua aa  guAAG   UGUAAAU     AGAUG  Auaugauaua uuauaugauauauu u
      |||| ||  |||||   |||||||     |||||  |||||||||| ||||||||||||||  
      uuau uu  uauuc   auauuua     ucuau  uauauuauau aguauauuauauag a
-----u    a  au     -cu       uauau     au          -              u 


mirna_id: ame-mir-3763
hairpin:
gaa  uuau    gcaauu    -   gU   CAU      -A    - -GG    a 
   ga    ucuu      acca gcg  UCG   UACUAA  AUAU C   UGGg a
   ||    ||||      |||| |||  |||   ||||||  |||| |   ||||  
   cu    agaa      uggu cgu  agc   augguu  uaua g   aucc u
--a  --uu    ---auc    a   gu   cuu      cg    a aca    a 


mirna_id: ame-mir-3764
hairpin:
ac   u    uugugacgu      u  uu        u    gc   c      ----g   g 
  gug gauu         guuggg uu  ggaagaau cuag  auu guugcu     gug u
  ||| ||||         |||||| ||  |||||||| ||||  ||| ||||||     ||| c
  uac cuaa         uAAUUC AG  UCUUUUUA GAUu  uaa caauga     cgc u
-u   -    uguuaauuu      U  UU        -    --   -      gugga   a 


mirna_id: ame-mir-3720
hairpin:
cu           --    -----    G    -AACA      ---acccg       uuu   uc  a     au 
  gagguucAUAC  GGUG     AUGA UUUA     Guuuac        agucugg   cga  ga ccuca  u
  |||||||||||  ||||     |||| ||||     ||||||        |||||||   |||  || |||||   
  cuucaaguaug  ucgc     uacu agau     caaaug        uuagacc   gcu  cu ggggu  u
--           ag    auuga    g    guuug      agaaagua       -uu   --  a     cu 


mirna_id: ame-mir-3765
hairpin:
acaugacaacagaaaa     A           --GAA        aac g       -----   aa    a 
                uGAAG AAAGGCAAGUU     AGAaucga   u auuugga     uug  auau a
                ||||| |||||||||||     ||||||||   | |||||||     |||  ||||  
                auuuc uuuccguucaa     uuuuaguu   g uaaauuu     aau  uaua a
---------------c     c           aaaaa        aaa g       cuaca   gc    u 


mirna_id: ame-mir-3766
hairpin:
gaa    ug    uggaauu    u    aacaa   u   ---        g    uuuu  a    a    c 
   uauu  auaa       uucg cgau     uuu uca   ucgaaauc aucu    cu gucg uauu g
   ||||  ||||       |||| ||||     ||| |||   |||||||| ||||    || |||| |||| a
   auag  uauu       aagu gcua     aaG AGU   AGUUUUGG UGGA    ga cagu auga a
--a    gu    uuagauu    -    -----   C   AAA        -    ---U  -    a    a 


mirna_id: ame-mir-3767
hairpin:
-       ----------   -a             a  a      uguuuaa          a    ua 
 uguggaa          aua  acaauuucaauua ua uaguaa       aauguguaaa uauu  c
 |||||||          |||  ||||||||||||| || ||||||       |||||||||| ||||  a
 acaucuu          uau  uguuaaaguuaaU AU AUCAUU       UUACACAUuu auaa  u
u       acauuuauaa   ac             C  C      -----UA          -    ug 


mirna_id: ame-mir-3768
hairpin:
-   -c  u c    aa   -    --     aug   g   u  a 
 gcg  ug g ggga  guc uugg  gcuuu   ggg uga ca c
 |||  || | ||||  ||| ||||  |||||   ||| ||| || a
 UGC  AC C CUCU  CAG AACC  uggag   ccu gcu gu u
u   CA  - U    GG   C    uc     -ga   g   c  g 


mirna_id: ame-mir-3769
hairpin:
a    -a      g  gg  c    u  gg       g  aaaaaaa  -a  -   g 
 ucuu  uagccu uu  uu ggcu au  aaaauug ga       gg  ga ucg a
 ||||  |||||| ||  || |||| ||  ||||||| ||       ||  || ||| a
 agaG  GUUGGA AG  AA UCGA UG  uuuuaau cu       cc  cu agc a
g    CA      -  AG  C    -  Ga       g  ------c  gg  g   u 


mirna_id: ame-mir-971
hairpin:
gga ag    aga a   g     ac   ggc  gu     u    uuc           c   cu 
   g  ggag   g cga gaugc  cgg   cg  ucacu uaag   gaauaccaagc ugu  a
   |  ||||   | ||| |||||  |||   ||  ||||| ||||   ||||||||||| |||   
   c  ccuu   c gcu cuaug  gcc   gc  AGUGA AUUC   CUUGUGGUUug aca  u
--a aa    --g a   g     gu   --a  uG     C    CAU           -   aa 


mirna_id: ame-mir-3770
hairpin:
-c       aug     A       AUCA           --    uu 
  aacgcac   gacgc AUCCUGC    AGUGCGUUGUu  uugu  u
  |||||||   ||||| |||||||    |||||||||||  ||||   
  uugugug   uugug uaggacg    uuacguaacga  aaua  u
ga       --a     a       aaug           cu    uc 


mirna_id: ame-mir-3721
hairpin:
--------ugaauc       au  a       cac     -  -agaaa       a 
              gagcauu  uu cuccuuu   uucga ga      aauaaaa a
              |||||||  || |||||||   ||||| ||      ||||||| g
              cucgUAG  AA GAGGAGA   AAGUU CU      uuauuuu a
uuaauuacuaccuc       --  -       -AA     G  agacac       u 


mirna_id: ame-mir-3771
hairpin:
-ga       -    a    a     gaac    cu 
   ugcucgu uaau ucgc guguu    gugg  a
   ||||||| |||| |||| |||||    ||||   
   acGAGCA GUUG AGCG CACAA    Uauu  a
ugc       C    -    A     --AA    ag 


mirna_id: ame-mir-3772
hairpin:
aaa   a   gg      ggg       ccca  gc  ac     aaacg 
   agg gcu  uguucc   uucgauu    gg  ug  ucgag     c
   ||| |||  ||||||   |||||||    ||  ||  |||||     c
   ucc cgg  GCAAGG   GAGUUAG    UC  Gc  agcuc     g
--a   g   AA      -AA       ---A  UA  -c     ccuuc 


mirna_id: ame-mir-3773
hairpin:
aua  u  u   -     u      u     u  aa    u  aa 
   ca cu cca uuaca ggcaag gcugu gc  acug cu  a
   || || ||| ||||| |||||| ||||| ||  |||| ||   
   gu ga ggu AAUGU CUGUUC CGACA CG  Ugac ga  a
--a  -  u   c     -      U     -  AA    u  ag 


mirna_id: ame-mir-3722
hairpin:
au    -a  cg   aaa    gg    g  -c   -u  -      AG   U AC      g 
  ggaa  gu  gug   ccuu  gauc gc  aga  CC GAUUCG  GUG G  GGUUuc u
  ||||  ||  |||   ||||  |||| ||  |||  || ||||||  ||| |  ||||||  
  ucuu  ca  uac   ggga  uuag cg  ucu  gg cuaagc  cgu c  uuaaag u
--    ag  au   cag    au    g  uu   cc  a      aa   u ga      c 


mirna_id: ame-mir-3774
hairpin:
---cua     c   uug      -----            a      u   uuucuuaucua     a 
      uuuca aag   gauuaa     aauuuuaaguga uuuuuc aag           acaau a
      ||||| |||   ||||||     |||||||||||| |||||| |||           ||||| g
      aaagu uuu   uuaauu     UUAGAAUUCAUU AAAAAG uuc           uguua u
gguuaa     u   uua      gaCUG            -      -   --uuucuugca     c 


mirna_id: ame-mir-3775
hairpin:
aaucuuuuu   uuu   -G   G   A     UU     gau     uggu   aaaaau     ua  c 
         uac   uGA  GCG AUG GGAGG  GAAUA   gaucg    ugc      uugug  ca g
         |||   |||  ||| ||| |||||  |||||   |||||    |||      |||||  || u
         aug   auu  ugu uac ucucu  uuuau   uuagu    acg      aacau  gu u
--------u   uuc   ag   a   a     -c     auu     ---u   ------     gg  a 


mirna_id: ame-mir-3776
hairpin:
c   g     ------      -a  -A      G   AGA    A     g 
 ggu cguga      aggggc  gg  GGAGGG GGG   GAGA GCGuu u
 ||| |||||      ||||||  ||  |||||| |||   |||| ||||| a
 cca gcgcu      uccuug  cc  cuuuuu ccc   uuuu ugcga c
a   a     uagcua      ca  gg      g   --g    a     g 


mirna_id: ame-mir-3777
hairpin:
aa    --agg   g  a        gcucuc          cgaaaaau      gcgcu            
  ugaa     ucu cg ggaggaaa      uuuuauuaaa        uggauc     ugucggaaugc 
  ||||     ||| || ||||||||      ||||||||||        ||||||     |||||||||| a
  acuu     AGG GU CCUUCUUU      AAGGUgguuu        acuuag     gcagcuuuaua 
-a    aaaaa   -  C        ---ACA          --------      -----            


mirna_id: ame-mir-3778
hairpin:
cua     -gg      uuauaaagauguu   -       --a ug          --a   g  g 
   ugaaa   guacga             gcg cuaauug   a  aauacuuguu   cuu ug a
   |||||   ||||||             ||| |||||||   |  ||||||||||   ||| || c
   auuuu   CGUGUU             CGU GGUUAAU   U  uuaugagcag   gaa gc c
--a     aaa      ------------U   A       AUA Gu          aaa   a  a 


mirna_id: ame-mir-3779
hairpin:
ca          C     ----C    CAC   ccgucc    cg       -  uug 
  ccgGCCGGGC UGCCG     UCGA   Gca      gcuu  uugaacu ug   c
  |||||||||| |||||     ||||   |||      ||||  ||||||| ||    
  ggcuggucug acggc     agcu   cgu      ugga  aacuugg ac   g
-a          u     caacu    ---   ------    aa       u  uuc 


mirna_id: ame-mir-965
hairpin:
-ug    u  u                   G  A     a aaa 
   gaca au ccaagGGGGAAAGGUUAUA CG UUAUG g   u
   |||| || ||||||||||||||||||| || ||||| |    
   uugu ua gguUUCCCUUUUUCGAUAU GC AAUac c   u
uua    u  c                   -  G     - gaa 


mirna_id: ame-mir-3780
hairpin:
aa   cgu    agua    U    C    --UA  -  A   aacuuu   ua  -     u 
  cuc   cgag    uAAC GCGG AUCG    AC UG Caa      ccg  gc ugcau u
  |||   ||||    |||| |||| ||||    || || |||      |||  || |||||  
  gag   gcuc    auug cgcc uagu    ug ac guu      ggc  cg gcgua a
-a   auu    ----    u    u    gaaa  c  -   ---gcc   -c  u     u 


mirna_id: ame-mir-3781
hairpin:
gaa     - gc     c    gugauugau        --a    g        ugaaua 
   gaauu g  ucuau gucg         gucaauua   acgc uauacaua      u
   ||||| |  ||||| ||||         ||||||||   |||| ||||||||       
   cuuaa c  AGGUG UAGC         UAGUUAGU   Ugug auaugugu      g
--a     a uU     C    ---------        GAA    a        ugagcg 


mirna_id: ame-mir-3782
hairpin:
-   uuu      --------a     ---u    c  -  -      C U      A AU   G   A    cau 
 gcu   gccaga         gacuu    cucc gc gc cugguc C GCAGAG C  CUG CGG CACg   u
 |||   ||||||         |||||    |||| || || |||||| | |||||| |  ||| ||| ||||    
 cga   uggucu         cugaa    gagg cg cg gaccag g cgucuc g  gac gcc gugc   u
c   --c      gacaaggag     cauu    a  g  u      c u      - cu   -   -    auu 


mirna_id: ame-mir-3783
hairpin:
a        aa  --ag  ag     g     c  c       g          --  aa 
 agaggacg  ga    ug  auggu ucauc ca caaacaa ugagagugug  uc  u
 ||||||||  ||    ||  ||||| ||||| || ||||||| ||||||||||  ||   
 ucuuuugc  uu    au  uacua agUGG GU GUUUGUU ACUUUCAUau  gg  a
g        ag  aaua  cu     a     A  A       A          cu  au 


mirna_id: ame-mir-3716b
hairpin:
c     ugaa    aa  acu   a     -     a    ucua      uu     ug 
 aaacu    auug  ga   uga uucga uggca ucgu    uguauu  ugcaa  u
 |||||    ||||  ||   ||| ||||| ||||| ||||    ||||||  |||||  a
 uuuga    uaaC  UU   ACU AAGUU AUUGU AGCa    acauag  acguu  u
a     -uaa    GG  ---   A     U     -    -uua      --     ua 


mirna_id: ame-mir-3784
hairpin:
-    uuuc  gc     c   a  -a    u   -uccg    uu 
 gcca    cg  gaaua aga ua  uucc cga     uucg  c
 ||||    ||  ||||| ||| ||  |||| |||     ||||   
 cggu    gc  UUUAU UUU AU  AAGG GCU     gagc  a
u    ccua  ua     C   A  AA    C   cucua    ua 


mirna_id: ame-mir-3785
hairpin:
- cg    u   uc     ---     u            c     g    c  cg  -   cuc 
 g  uaaa gug  ucgau   ucucc ugggaggucuca gacgu auag gg  cc cga   u
 |  |||| |||  |||||   ||||| |||||||||||| ||||| |||| ||  || |||   c
 c  guuu cac  agcug   agggg guccuUCAGAGU CUGCA UGUC CC  gg guu   g
u cu    -   cc     ucu     c            C     A    -  AU  u   aaa 


mirna_id: ame-mir-3786
hairpin:
aca  aacaaa   u   c     C         UU         C gaa  u 
   gg      acg guc gacgu UUGUCCUGG  CAUGUAGGG G   ug u
   ||      ||| ||| ||||| |||||||||  ||||||||| |   || a
   cc      ugc cgg cugca agcaggacu  guaugucuc c   ac c
--a  --aacc   u   u     u         cg         a -aa  g 


mirna_id: ame-mir-3787
hairpin:
c      c      uagggaa      -aa     --UC    -----   -    -   AAac      a  a 
 aucacg guuaua       ucgaua   acGAG    GAGC     UUG UGUG UGG    guucua ca c
 |||||| ||||||       ||||||   |||||    ||||     ||| |||| |||    |||||| ||  
 uagugc caaugu       agcuau   uguuu    uucg     aac gcgc acc    caaggu gu a
u      c      uuuggac      aaa     uaac    uuaaa   u    g   -aaa      -  u 


mirna_id: ame-mir-3788
hairpin:
cuc    g  ccuuaauca   -ua   -   UUAC       CC   -gcaa    - auc     
   gacc cu         ggg   GUU CCG    CUCCUGU  CUC     ucgu c   gucc 
   |||| ||         |||   ||| |||    |||||||  |||     |||| |   ||| c
   cugg ga         ccc   cga ggc    gagggcg  gag     agca g   cagu 
--a    -  ---------   uag   a   ---c       -a   aaccc    a aac     


mirna_id: ame-mir-3789
hairpin:
-  g u  a    gg      uu g a   -   a  a  ug  ------     
 cc c cg acuc  cccucg  u g ccg gca ca au  gc      cgcc 
 || | || ||||  ||||||  | | ||| ||| || ||  ||      ||| g
 gg g gc uggg  ggGAGU  A U GGC CGU GU UA  cg      gcgc 
u  g c  a    --      GG G -   U   G  C  gu  uaguac     


mirna_id: ame-mir-3790
hairpin:
a  AA      -------------------A    --      ga    g     ugag 
 GA  GCGAUU                    AGCG  AUCGAG  gucu ggcgg    a
 ||  ||||||                    ||||  ||||||  |||| |||||     
 cu  cgcuag                    uugc  ugguuc  caga ccguc    a
c  ag      gagggagagagaaggagaag    au      -g    a     uaaa 


mirna_id: ame-mir-3791
hairpin:
aau      a u c   c       a   cg       u    ggaa 
   auagag c g ugu ggaugaa ucu  uccggug gguu    a
   |||||| | | ||| ||||||| |||  ||||||| ||||     
   ugucuc g c gua CCUACUU AGG  GGGCCAC ccaa    a
--u      c c u   A       -   AU       U    aaaa 


mirna_id: ame-mir-279b
hairpin:
aaa    u    aau  u  a     gu            a     - -       gca   uugua 
   uguu guga   uu au cucuu  uauuagggacga guauu c aucuagu   acg     a
   |||| ||||   || || |||||  |||||||||||| ||||| | |||||||   |||      
   acaa uacu   aa ua gagag  auaauCCCUGCU CAUAA G UAGAUCA   Ugc     a
--a    c    aau  c  a     --            -     A C       --G   uaaag 


mirna_id: ame-mir-9c
hairpin:
gcu      --        -uaccaaauc   c  uu      u     g       a  g      gaau 
   guuuca  cacauuuc          guc cg  uauuuu cuuug ugagcua cu uauggu    u
   ||||||  ||||||||          ||| ||  |||||| ||||| ||||||| || ||||||     
   uaaagu  guguaaag          cag gc  auagaA GGAAC ACUUGAU GA AUaccg    g
--u      ca        uacuucgaua   a  uu      C     G       C  A      gaaa 


mirna_id: ame-mir-2944
hairpin:
a    -------------    aauuu  a         -    a g    c             uug cg 
 cucc             agaa     ag ugaaagaau ucgg g aacu uugcugugauaug   c  u
 ||||             ||||     || ||||||||| |||| | |||| |||||||||||||   |  a
 gagg             ucuu     uc gcuuucuua GGUC C UUGA GACGACACUAUac   g  a
c    aaccauuuccacu    -----  c         U    - A    U             uua aa 


mirna_id: ame-mir-318
hairpin:
ac   ---c   au    -ua     a  --      ug          uguu       aau 
  gca    uga  auua   aguac uc  auggga  aacgugaucc    ugacggu   a
  |||    |||  ||||   ||||| ||  ||||||  ||||||||||    |||||||    
  cgu    gcu  uaau   ucaug ag  uaCCCU  UUGUAUUGGG    ACUgcua   a
-a   uauc   ac    uag     -  ca      GU          --UC       guu 


mirna_id: ame-mir-3792
hairpin:
c    ucuc  c    uuac    auuc    -  --g     AG   ---A  -     -   --    aaa    
 ggcc    gu cgag    gugu    cgug ga   GACUG  GAA    GA GAGAA GGA  ucgg   cgc 
 ||||    || ||||    ||||    |||| ||   |||||  |||    || ||||| |||  ||||   || a
 ccgg    ca gcuu    uaca    gcgc cu   uugac  cuu    cu cuuuu ccu  ggcc   gca 
u    --uu  a    ----    gcua    u  auu     aa   guag  a     g   ua    aac    


mirna_id: ame-mir-927b
hairpin:
-     ca  ------g    -   u        UU      U           --u    c 
 uucga  gu       uguu acg uauuuaUU  AGAAUU GUACGCUCUGU   guca a
 |||||  ||       |||| ||| ||||||||  |||||| |||||||||||   ||||  
 gaguu  ca       acaa ugc gugaauaa  ucuuag caugcgagaca   uagu a
g     cc  acuauua    c   u        uu      c           cuu    a 


mirna_id: ame-mir-3793
hairpin:
uuU     U     CC    -A  -        -     cgc 
   GAGCG GUUUU  CUGG  CU Ggucuauc ugucg   g
   ||||| |||||  ||||  || |||||||| |||||    
   uuugc caaag  gacc  ga ccaggugg gcagu   a
--c     u     aa    gc  u        u     ucu 


mirna_id: ame-mir-3794
hairpin:
cga    gag      uaua  -   U        AC      g  ag 
   auug   gaucga    UG GAA GGAAGAGG  GUUUCC cg  u
   ||||   ||||||    || ||| ||||||||  |||||| ||  a
   ugac   cuaguu    ac cuu ucuuuucu  caaagg gc  a
--g    -ag      uaac  g   -        -a      a  ag 


mirna_id: ame-mir-306
hairpin:
aa     u    aag  -caaaca           u  C      UG   GA  C      uaca 
  uucag aagu   gu       aauauuuacuu gU AGGUAC  AGU  CU UGAGua    u
  ||||| ||||   ||       ||||||||||| || ||||||  |||  || ||||||     
  aaguu uuua   ca       uuauaggugag ca uccaug  ucg  ga acucau    u
-a     -    --a  acauaag           u  a      gu   ac  a      uaaa 


mirna_id: ame-mir-3795
hairpin:
aau    U -       UG   G      a    --      c 
   uGCG C GACACGU  GAC UGUUua uuaa  uucauu g
   |||| | |||||||  ||| |||||| ||||  |||||| u
   acgc g cugugca  uug gcaggu aauu  aaguga g
--c    u u       ca   -      -    ua      u 


mirna_id: ame-mir-3796
hairpin:
u  -  -   ----g      a          --g     g   ------    a   -uua      a 
 cc au cgu     acgaau uucuucucuc   gggau cga      cucg gag    ucgggu a
 || || |||     |||||| ||||||||||   ||||| |||      |||| |||    |||||| u
 gg ua gca     ugUUUA GAGAGGAGGG   UCCUA Gcu      gagu uuc    gguucg u
u  c  u   guuaa      G          GAA     -   uaguuu    a   uuug      a 


mirna_id: ame-mir-3797
hairpin:
-  gg   GA  U  C  G -A         -aagug  aaac       cgaaacc       ---       g 
 cg  aCA  AC GG UC U  UUUUAUUuc      uc    cuccucu       uccgcuc   cgugaga a
 ||  |||  || || || |  |||||||||      ||    |||||||       |||||||   |||||||  
 gc  ugu  ug cc ag a  gaaauaaag      ag    gaggaga       aggcgag   gcgcuuu c
u  ua   gc  -  a  g ga         aaggaa  -aaa       ------a       ccu       g 


mirna_id: ame-mir-3477
hairpin:
-uu       guu  a     U         C     C       gug  a 
   ugguagc   gg guggg AAUCUCAUG GGUAA UGUGAGu   ug a
   |||||||   || ||||| ||||||||| ||||| |||||||   || u
   accauug   cc caccc uuggggugc ccauu auacucg   au u
auu       ---  -     u         u     -       aaa  g 


mirna_id: ame-mir-3798
hairpin:
-c       uu       -c    -cuc   uaau      -a     a 
  uuuuaaa  aaauaca  uuau    gaa    uucucc  guauc a
  |||||||  |||||||  ||||    |||    ||||||  ||||| a
  agaAUUU  UUUAUGU  AAUA    CUu    aagagg  cauag a
ua       -C       CU    AAUA   ---u      ga     u 


mirna_id: ame-mir-3799
hairpin:
uc   cuua   uu        AUU      C     -   a 
  gau    gcg  ggAACGAU   GAUUGA UCGAU aga a
  |||    |||  ||||||||   |||||| ||||| ||| a
  cua    cgu  cuuugcua   uuagcu agcug ucu c
-a   --ag   gc        acc      c     g   u 


mirna_id: ame-mir-279c
hairpin:
aua        u  u          -c       ua     u ga 
   uauucuaa cg uggacgggug  acucugg  ucaug g  u
   |||||||| || ||||||||||  |||||||  ||||| |   
   auaagguu gu ACCUGCUCAC  UGAGAUC  AGUac c  u
--c        c  u          AC       --     u gu 


mirna_id: ame-mir-3800
hairpin:
--uac     uc    c   ga u      -c    ac  uccuuaa       uaaau 
     ugugg  caca guu  c gucucg  ggcc  gu       aaggcgg     c
     |||||  |||| |||  | ||||||  ||||  ||       |||||||     a
     AUACC  GUGU UAG  G CGGAGC  ccgg  ca       uuccgcu     c
aauac     --    -   UC C      ca    -c  uuuuucc       uugcg 


mirna_id: ame-mir-3801
hairpin:
auu     -c   acag     ag   u  gguac     G  A    G AGG        aa   -----ag    a 
   ggauc  ggu    uguac  uuu gc     aAAUC CG UUGA A   CGAGCcgu  ugc       gcgu u
   |||||  |||    |||||  ||| ||     ||||| || |||| |   ||||||||  |||       ||||  
   ucugg  ccg    gcaug  aga cg     uuugg gc gacu u   gcuuggca  acg       ugca g
---     uu   ----     ga   u  agcua     g  -    g --a        --   cuaacaa    u 


mirna_id: ame-mir-3723
hairpin:
ga    aagucacuau        u  CA -   ----UU    --       -----     gu 
  ccgg          uuucggag uA  G CGU      CAAA  GUUUUCG     UAaau  a
  ||||          |||||||| ||  | |||      ||||  |||||||     |||||   
  ggcc          aaggccuc au  c gca      guuu  caaaggc     auuug  a
-a    ----------        u  ag a   cacuuu    cc       uaaaa     ua 


mirna_id: ame-mir-3724
hairpin:
u   g   -       ucc    ---u    --  a gg  a     -aa    ua         -   -   gaa 
 ucu aua auuuaaa   guuu    cgau  uc u  au gaacg   ugag  gaauauuug guu aau   u
 ||| ||| |||||||   ||||    ||||  || |  || |||||   ||||  ||||||||| ||| |||   a
 aga uAU UAAGUUU   CAAA    GCUA  ag g  ua uuugu   acuu  uuugugaac cga uua   c
-   a   A       ---    UGGU    aa  a uu  a     aaa    --         u   a   aua 


mirna_id: ame-mir-2796
hairpin:
aa   ------   aaga  ag  a   -         -  u  gg      au      c    agca 
  gga      ggg    ga  ga cgu agcgauaag gu ag  guuucu  cggccu cagc    a
  |||      |||    ||  || ||| ||||||||| || ||  ||||||  |||||| ||||     
  ccu      ccc    cu  cu gca ucgcuguuc CG UC  CAAAGG  GCCGGA Guug    c
-a   agaaag   --gg  -g  a   a         u  U  AU      CG      U    guag 


mirna_id: ame-mir-3725
hairpin:
----uau      -aaa   a    aucg      ----       a    g g    cuu 
       uuggau    guu uuau    gaagaa    ggaagag gaga a agau   u
       ||||||    ||| ||||    ||||||    ||||||| |||| | ||||   u
       aaccug    uaG AAUG    CUUCUU    UCUUUuc cuuu u ucua   a
gguugcu      gucg   A    ----      UACA       -    g g    ucu 


mirna_id: ame-mir-3726
hairpin:
u   gaaagauaa     c       c    cc    ccgcgAA          -AU           cau 
 ggc         acagg cgagugg acgg  uugu       CGAGUGGUGG   GCCAGCGUuua   u
 |||         ||||| ||||||| ||||  ||||       ||||||||||   |||||||||||    
 ccg         ugucc guuuacu ugcc  aacg       gcucaccgcu   ugguugcaaau   c
g   ---------     c       c    --    ---acaa          auc           uac 


mirna_id: ame-mir-3727
hairpin:
uc  ---c  u   uc       ac     -  ag 
  gc    ag cgg  gcgcguu  cgagc ca  u
  ||    || |||  |||||||  ||||| ||   
  cg    UC GCC  CGCGCAA  GCUUg gu  g
-u  aaAA  -   CU       GC     a  ag 


mirna_id: ame-mir-3728
hairpin:
gagc    g   cuauua  ---a    uaaCCAU       AU     A    g    ua    a 
    gcgc ugu      gu    gcgg       CCGUGGG  UCGUA UUUA uuuc  guuu u
    |||| |||      ||    ||||       |||||||  ||||| |||| ||||  |||| c
    ugcg aca      cg    cgcc       ggcgcuu  agcau ggau gaag  uagg u
---a    g   uaaaug  gaag    -------       --     a    g    -c    u 


mirna_id: ame-mir-3729
hairpin:
----u   c   u    auc      -  -     u  gaag     a 
     caa gug aguu   ggaaaa ac agagu cg    agauc a
     ||| ||| ||||   |||||| || ||||| ||    |||||  
     GUU CAC UCAA   CCUUUU Ug uuuca gu    ucuag g
aaaAC   -   -    --C      G  c     -  auaa     a 


mirna_id: ame-mir-3715
hairpin:
-------g       ug   U        A        GAC       acg 
        ugugucg  cua CGGUAAGC GAGUAUAA   CUuugag   c
        |||||||  ||| |||||||| ||||||||   |||||||    
        gcgcggc  ggu gcuauuug cucguauu   gaaauuu   g
cgagcaaa       gu   u        c        -au       aaa 


mirna_id: ame-mir-3730
hairpin:
uaacuucauuauguauc  ---     -   ---         A    U   U  auu 
                 gc   gauga ACA   ACGAGGGUG AGAU GCG Gu   u
                 ||   ||||| |||   ||||||||| |||| ||| ||    
                 cg   cuacu ugu   ugcuccuau ucua cgc ua   g
----------------u  acc     a   cuu         c    -   u  aau 


mirna_id: ame-mir-3731
hairpin:
-  -   a  ag    aa    A    --------    A    -  AACu   g  u 
 gg uau gu  cuug  GAAC UCGA        CCAA GCUU GC    gau cc g
 || ||| ||  ||||  |||| ||||        |||| |||| ||    ||| ||  
 cu aug ua  gagc  cuug agcu        gguu cgaa cg    cua gg a
g  g   a  ca    ac    a    uuccguuu    g    a  ----   a  a 


mirna_id: ame-mir-3732
hairpin:
a    ---ucg   c    -u    u     --ugu    -   a   -     uaucaa    ucu    uuc 
 aucg      gag auca  ugug guguu     augc uuu cua cuuuc      auug   gggu   u
 ||||      ||| ||||  |||| |||||     |||| ||| ||| |||||      ||||   ||||    
 uagu      CUC UGGU  GUAC CGCAG     ugcg aaa ggu gaaag      ugac   ccca   c
a    uuUCUA   -    UU    -     Cgguu    u   g   u     ------    uuu    uuc 


mirna_id: ame-mir-3716a
hairpin:
ug       ag   ----gu       u     -      c     uu   -uggccuc     --g     a 
  uaaagcu  gcu      uuuuauu uauau auuucg aauuu  cau        uguau   aaaug c
  |||||||  |||      ||||||| ||||| |||||| |||||  |||        |||||   ||||| c
  auuucga  uga      agaauaa AUAUA UAAAGU UUAGG  GUA        gcaua   uuuac u
-g       --   auaaau       c     C      -     -U   Uaaauuau     aca     a 


mirna_id: ame-mir-3733
hairpin:
gc        cg   accaa        --AU     A       cgc c   g 
  cguuucug  auu     guUUACUA    CUCGA UUUUUCU   g aac a
  ||||||||  |||     ||||||||    ||||| |||||||   | |||  
  guaaaggu  uaa     uagauggu    gagcu aagaaga   c uug u
-u        aa   ---ga        agau     a       -au c   c 


mirna_id: ame-mir-3734
hairpin:
aa   uuaau  a      cg    -   uuu  - ug     
  agg     gc guuagc  gucc ccc   ug g  gccc 
  |||     || ||||||  |||| |||   || |  ||| u
  ucc     cg cGAUUG  CAGG GGG   AC C  Uggu 
-c   ----u  -      --    A   --C  G UU     


mirna_id: ame-mir-3735
hairpin:
uaaa       --CAA       --------------------    GC       augc 
    uaACGAG     AGUUUCC                    UCGU  Cgauaag    a
    |||||||     |||||||                    ||||  |||||||     
    auugcuu     ucaaagg                    agca  gcuauuc    a
---a       ccaag       ucaaaaagauaaccaaaaca    --       guuu 


mirna_id: ame-mir-3736
hairpin:
cga      cg     gg GA      ---       ---   -   a   au   c 
   gaucug  uccuc  C  UUACCC   UGAGUAU   GCU CCg ugc  agg g
   ||||||  |||||  |  ||||||   |||||||   ||| ||| |||  ||| u
   cuggac  ggggg  g  gauggg   guucaug   cgg ggc gcg  ucc g
--g      uu     -a aa      cug       cuc   u   a   cc   u 


mirna_id: ame-mir-3737
hairpin:
g            - ga     -    AAU         ----------UUu         ugu 
 aucaaaguaugg c  aaGAU CGGA   UUUGAUAUG             guuuguaua   a
 |||||||||||| |  ||||| ||||   |||||||||             |||||||||    
 uaguuucauauu g  uuuua guuu   gaacuguac             uaaauauau   u
g            u aa     a    -au         cacauaguaauuu         uua 


mirna_id: ame-mir-3738
hairpin:
-   aa    -    ---A    -AU  U      -----A    gc 
 cgg  ucgc GUUU    CCGG   GU UUCGCA      Uuuc  g
 |||  |||| ||||    ||||   || ||||||      ||||   
 guu  agcg cgag    ggcc   cg aagugu      aaag  g
a   ga    u    cagg    guu  u      guaaaa    gg 


mirna_id: ame-mir-3739
hairpin:
----------c    aauc  c  - ga      g     c    a  aau      cu 
           uucu    gc gc c  uccucc cccga gagg uc   uucuau  c
           ||||    || || |  |||||| ||||| |||| ||   ||||||  u
           aaga    CG CG G  AGGGGG GGGUU uuuc ag   gaggug  a
uaauaagcuca    ccgU  A  A AG      A     u    a  --g      cg 


mirna_id: ame-mir-3740
hairpin:
uu   ga u   -              UGAC  -      Auu   ---  a 
  uca  g uga aaagaGGAAAAGGA    GA GGAUUA   uga   gg u
  |||  | ||| ||||||||||||||    || ||||||   |||   ||  
  agu  c auu uuuuuuuuuuuccu    cu ccugau   acu   cc g
-u   ag u   g              -uua  a      ---   uaa  u 


mirna_id: ame-mir-3741
hairpin:
a   auua    --ua    c  gg       gauaauauugaugg    -     -gua   uugcaagaaua     gg 
 ccg    auga    ccca ac  cucuuuc              cccc cucgu    ccu           ucucg  g
 |||    ||||    |||| ||  |||||||              |||| |||||    |||           |||||   
 ggu    uauu    gggu UG  GAGAGAG              GGGG GAGCA    ggg           agagc  a
a   aaug    uuca    A  AA       --------------    A     aaaa   -----------     au 


mirna_id: ame-mir-3742
hairpin:
-    uu a      uc   -----a       ---UUUU     A    C aa 
 ucuu  u uccgug  guu      AAAUAUA       AAACG CGGA g  u
 ||||  | ||||||  |||      |||||||       ||||| |||| |   
 agga  a gggcac  uag      uuuguau       uuugc gccu c  c
a    uu -      cu   auaccg       uauuuau     -    c cc 


mirna_id: ame-mir-3743
hairpin:
ua     u     a   g           uc  c  -c     
  cuugg ccgag ggc gagaaggaagu  cg gg  gcgu 
  ||||| ||||| ||| |||||||||||  || ||  ||| u
  ggacc gguUC CCG CUUUUCUUUCA  GC cc  cgcc 
-c     -     C   A           GU  U  cu     


mirna_id: ame-mir-3744
hairpin:
-   ---uau       ------        C     GAAA      -  g        ---auuuu   uuua 
 gag      uaaaguu      gaCGGUAU UUUGU    AAUUUC Ga aagaggga        gaa    a
 |||      |||||||      |||||||| |||||    |||||| || ||||||||        |||     
 cuc      guuucaa      cugucaua aaaua    uuaaag uu uucuccuu        cuu    a
c   uaccuu       cuacuu        -     agaa      a  g        guaucuau   ugcu 


mirna_id: ame-mir-980
hairpin:
a     u    a  cg    g   uc     c     uauuu 
 gcuga uacg ug  gcuc uca  gggca uuugc     u
 ||||| |||| ||  |||| |||  ||||| |||||      
 ugacu augc AC  CGGG AGU  UCCGU GAAcg     u
g     c    c  AA    A   UU     C     caaau 


mirna_id: ame-mir-750
hairpin:
ggg    gcau   cu      u   u     gc         -uga      a    -  -----    ag 
   cguu    gga  gugauc gca gacuu  aguuggaag    ggaucu ggca gu     gagc  c
   ||||    |||  |||||| ||| |||||  |||||||||    |||||| |||| ||     ||||   
   gcaa    ucu  uauuag ugu cugga  UCGACCUUC    UCUAGA CCgu ca     cucg  a
--a    accc   ac      u   u     aC         UCAA      -    u  auagu    cg 


mirna_id: tgu-mir-25
hairpin:
--------ccc     -   - ag       --aaugg      u 
           gagca gua c  gggacag       gggcug g
           ||||| ||| |  |||||||       ||||||  
           cuugu CAU G  CUCUGUU       Cuugac g
gguugcuucua     U   C -G       CACGUUA      u 


mirna_id: tgu-mir-192
hairpin:
uuccccauc uc   --c    a    CCU   AAUUAA       g 
         g  ucc   agca CUGA   AUG      CAGAGuu g
         |  |||   |||| ||||   |||      |||||||  
         c  agg   ucgu gacu   uau      guuuuag u
-------ga ga   auu    c    --u   ccccuc       u 


mirna_id: tgu-mir-10a
hairpin:
aca   u   a  a     u        A    G     C          uga   u 
   gaa guu uu cguug cuauauaU CCCU UAGAA CGAAUUUGUg   uau c
   ||| ||| || ||||| |||||||| |||| ||||| ||||||||||   |||  
   cuu caa aa guagc gguauaua gggg aucuu gcuuagacac   aua a
-ca   -   a  c     u        a    -     a          -ug   u 


mirna_id: tgu-mir-132
hairpin:
auccgac   --g     g           u     a      g      
       gcc   cccgg cgaccguggcu uagau guuacu uucca 
       |||   ||||| ||||||||||| ||||| |||||| |||| c
       cgg   gggcc GCUGGUACCGA AUCUG CAAUga ggggu 
gcucaga   aca     -           C     A      g      


mirna_id: mghv-mir-M1-10
hairpin:
UU       C  A   C        gucu 
  AAGAACC UC GUG AAUCacuu    g
  ||||||| || ||| ||||||||    c
  UUCUUGG AG CAC UUAGUgag    a
UU       A  G   A        guuu 


mirna_id: mghv-mir-M1-11
hairpin:
                        a 
gacAGCUGUCAGGGGUUACAUGag g
|||||||||||||||||||||||| a
CUGUCGACAGUCCCCAAUGUacuu a
                        c 


mirna_id: mghv-mir-M1-12
hairpin:
-guAA    ---       U      U  aaauuaa 
     GGGU   ACUCUCA CACCAA GU       u
     ||||   ||||||| |||||| ||       a
     CCCA   UGAGGGU GUGGUU ca       u
uUUUC    UCC       -      U  aacgaug 


mirna_id: mghv-mir-M1-13
hairpin:
U        -  UGU    -    -c   u 
 GGGAAGAG UC   UGAG UGGC  gcg a
 |||||||| ||   |||| ||||  ||| g
 UUCUUCUC AG   ACUC AUcg  ugu g
U        G  UGU    U    aa   u 


mirna_id: mghv-mir-M1-14
hairpin:
gcCC       G         G   - ug 
    CGUUCUG AUGCUGUGG ACa c  a
    ||||||| ||||||||| ||| |  a
    GCAAGAC UGCGACAUC Ugu g  a
uUUU       G         G   c uu 


mirna_id: mghv-mir-M1-15
hairpin:
  CU     ---C    -CC    U  U 
AG  ACCCG    GUGG   GGAG GU U
||  |||||    ||||   |||| ||  
uc  ugggc    cacc   ucuc ca a
  uc     cuuc    caa    c  g 


mirna_id: tca-mir-3802
hairpin:
cacuu      acuuuau      ---aucaacaaa  u     UU   -   -       GA 
     gaugua       acaaaa            ag auggc  GCU UGA AUGACGA  U
     ||||||       ||||||            || |||||  ||| ||| |||||||  A
     uuauau       uguuuu            uc uaCCG  UGA GCU UAUUGCU  a
auuuu      ---acuu      guaacaucgcug  -     -C   U   A       Aa 


mirna_id: tca-mir-3803
hairpin:
cacac      A     ---AA     A  U    ----aa   uc 
     gaggGA UAUUA     AAUGG GG Acau      cgu  u
     |||||| |||||     ||||| || ||||      |||   
     cuccCU GUGGU     UUACC CC UGUA      gcg  g
accuu      -     CAAUG     A  -    AUaacc   uu 


mirna_id: tca-mir-3804a
hairpin:
auauu           AUCA   UCC       U    cu 
     uuuUGGCACAC    AUG   ACGUUUU guga  u
     |||||||||||    |||   ||||||| ||||   
     AAGAUCGUGUG    UAC   UGUAaag cgcu  g
ccaaC           --AA   -CU       u    ua 


mirna_id: tca-mir-3804b
hairpin:
cucgg      a   --ca        AACA   UCC       U c   uu 
     guuauc gcu    UUGCACAC    AUG   ACAUUCU g gau  c
     |||||| |||    ||||||||    |||   ||||||| | |||  a
     cgaugg cga    agCGUGUG    UAC   UGUAAGG c cug  u
gaaaa      -   cuaa        --AA   -CU       U a   ca 


mirna_id: tca-mir-995
hairpin:
cuaau     a   c c           U  A      UC  u   u 
     uuagc gaa u ugAGCUGAAUC UG GGUGCU  Cg ggu u
     ||||| ||| | ||||||||||| || ||||||  || |||  
     aaucg cuu G AUUCGACUUAG AC CCACGA  gc ucg g
ccauc     c   u C           U  A      -U  -   g 


mirna_id: tca-mir-2765
hairpin:
a  ag    gaaa     -   ----          -agU  U      A C          u     
 aa  uacc    uucuu gga    uauagugagg    GG AACUCC C ACCGUUGGCg gugu 
 ||  ||||    ||||| |||    ||||||||||    || |||||| | |||||||||| ||| u
 uu  augg    aggaa ccu    augucgcucC    CC UUGAGG G UGGCGACcgu caug 
g  ga    -aac     a   cuua          AAUU  -      A C          -     


mirna_id: tca-mir-3805a
hairpin:
uuuug    ag      u   A   C       U        uucaau 
     ucca  cucaag ccG UCA AUGUGGG CGUAuauu      a
     ||||  |||||| ||| ||| ||||||| ||||||||       
     gggu  ggguuC GGC AGU UACGCUC GUAUAUaa      u
uuguu    -g      U   -   C       U        uacuau 


mirna_id: tca-mir-3806
hairpin:
aacaa      uu  uuuu ag   ----auuuca      uu    uU             U U         uuua 
     aaaguu  au    c  agc          accaau  ccug  UCUGUUCCCGGAU G CACAUAUuu    a
     ||||||  ||    |  |||          ||||||  ||||  ||||||||||||| | |||||||||     
     uuuuag  ua    g  ucg          ugguug  gGAU  AGAUGAGGGCCUA C GUGUAuaaa    a
---ua      uu  ---u cu   gcaacuaaca      gg    CU             - -         uuau 


mirna_id: tca-mir-3807
hairpin:
auuaa         c  gc A      U     G    C    c  aauu 
     uaauuaauu gg  g UGGCGA GAUGU CGGC Aaau ga    c
     ||||||||| ||  | |||||| ||||| |||| |||| ||     
     auuaauuga cc  U ACCGCU CUACA GCCG UUua cu    u
cgaac         -  uA C      C     A    -    -  aaag 


mirna_id: tca-mir-3808
hairpin:
uuuaa  gg  uuua         uca               U  -          ga 
     ga  gu    accaauuuu   gucUCAUAUUCGCAC UG ACAUAUUuug  u
     ||  ||    |||||||||   ||||||||||||||| || ||||||||||  u
     cu  ca    ugguugaag   cGGGGUAUAGGUGUG AC UGUAUaaaau  a
ggcaa  ga  ----         --c               C  A          aa 


mirna_id: tca-mir-3809
hairpin:
ucauu        g     A        U   C        aauu 
     aauguuug cggaa UCAUAACU GCU GCUGAugu    u
     |||||||| ||||| |||||||| ||| ||||||||    u
     uuguaaau gucuu AGUAUUGG UGA UGGCUGca    a
cucgu        a     A        U   C        gaca 


mirna_id: tca-mir-3810
hairpin:
aaaua  a  u    uc    u     --UUUA      UU       u  u 
     ga ga aaug  cgau UGUAG      CACGAA  UGGUCCU uu u
     || || ||||  |||| |||||      ||||||  ||||||| ||  
     cu uu uuac  gcua ACAUC      GUGCUU  ACUAgga aa u
cugca  g  u    gu    C     UAAUGG      --       u  u 


mirna_id: tca-mir-3811c-1
hairpin:
uuuau     uc     a UC UG    G    -           guu 
     ccaau  ucagg U  U  CUCA GGUU UACAUGUuuug   u
     |||||  ||||| |  |  |||| |||| |||||||||||   a
     gguug  gguCC A  G  GAGU CCAA AUGUAUaaagu   a
ugacu     ga     - GA GU    G    C           aua 


mirna_id: tca-mir-3812
hairpin:
uuuuu       - -   ---g           u        UUU     --A  C     guu 
     uaggauu g uga    cugaggcucgu uUAAGUGA   UGAUG   CA UAUUG   a
     ||||||| | |||    ||||||||||| ||||||||   |||||   || |||||    
     aucuuga c gcu    gauuucgagua GAUUCACU   ACUAC   GU Auaac   u
aaacc       a u   uuua           C        ---     ACG  C     aag 


mirna_id: tca-mir-3813
hairpin:
uuuaa      c              -      U         aaa 
     guguug aaauuuuUAUUCUG CUCUUU CGACGUUUU   a
     |||||| |||||||||||||| |||||| |||||||||   u
     cacagu uuuaaaAAUAGGAC GAGGAA GCUGCAAaa   u
cuaaa      u              U      -         agu 


mirna_id: tca-mir-3811d
hairpin:
aaguu   u            a    U    G    -           guc 
     uua ccaauucucagg UUCU CUCA GGUU UACAUGUUuug   u
     ||| |||||||||||| |||| |||| |||| |||||||||||   a
     gau gguuggggguCC GAGG GAGU CCAA AUGUAUaaagu   a
caacu   u            A    U    G    C           aua 


mirna_id: tca-mir-3814
hairpin:
uucuc     ug            UU       U  U     uaaa 
     uuugu  aaaguuUACAAU  AGCGCUC AU Cuagu    u
     |||||  ||||||||||||  ||||||| || |||||     
     aaacg  uuuuagauGUUG  UUGCGAG UA GAUca    u
uuuaa     gu            -U       -  C     cauu 


mirna_id: tca-mir-3815
hairpin:
gaaaa                  G     -U     AAU     ugu 
     aauuauuugcgauUGGGG UAGGA  GCUCA   GUuug   u
     |||||||||||||||||| |||||  |||||   |||||    
     uuaauaaauGUUGACUCC AUCUU  UGAGU   caaau   u
uaucg                  A     CC     AUU     uaa 


mirna_id: tca-mir-3816
hairpin:
gauag     a       uu  -   uua   gagc   --gcaaauu     u        AC    C   UU          -ua  u 
     ugcag uuuagaa  gu auu   guu    ugg         uauug ggccgguu  AAGG AUG  UGGCAGCAAU   gc u
     ||||| |||||||  || |||   |||    |||         ||||| ||||||||  |||| |||  ||||||||||   ||  
     auguu agauuuu  ca uaa   caa    gcc         gugac cugguuaa  UUCC UAC  ACCGUCGUUa   ug u
-----     a       uu  c   uuc   -aua   acaaccuuu     u        CA    A   UU          uaa  u 


mirna_id: tca-mir-3817
hairpin:
uccaa     cugc   aua  ug          C         -   UG         u 
     gguug    gag   ac  gggccaguuU GGGGUGUGG GAG  GUAUuauuu u
     |||||    |||   ||  |||||||||| ||||||||| |||  ||||||||| u
     ccaac    uuc   ug  ucugguuaaA CUCCACAUC CUC  UAUAAUgaa u
aucag     ----   --a  gu          C         A   GU         a 


mirna_id: tca-mir-3818
hairpin:
agaaa       c   u    -    C     AAU    --     a 
     ugugcug aaa uUUC CUUU GUUCC   GAUG  CUuua a
     ||||||| ||| |||| |||| |||||   ||||  |||||  
     acacggu uuu aaag gAAA CGAGG   CUAC  Ggagu u
uauaa       u   c    c    U     CGU    AA     u 


mirna_id: tca-mir-3805b
hairpin:
aagaa    u c   uau   -    U    U    UU      U    GUGa 
     gauu g gcc   ucc cagg CCGU CACA  CGGAUU UAUU    a
     |||| | |||   ||| |||| |||| ||||  |||||| ||||     
     cuag c ugg   ggg GUUC GGUA GUGU  GCUUAG AUaa    u
aacaa    c -   -cu   u    U    -    CU      U    auua 


mirna_id: tca-mir-3811e
hairpin:
auacg   --               ga   UU   UG    -          -ug  a 
     guu  uuaacuaauucucag  UUC  ACU  CGGU GUACAuguuu   gu u
     |||  |||||||||||||||  |||  |||  |||| ||||||||||   ||  
     caa  gauugguugggggUC  AGG  UGA  GCCA CAUGUAUaaa   ua g
uucga   cu               AG   --   GU    A          uga  a 


mirna_id: tca-mir-3820
hairpin:
aaaaa     ug      -C    C     GU     C     aua 
     uugug  caauuu  UUGC AAGCC  UACAG auuuu   u
     |||||  ||||||  |||| |||||  ||||| |||||    
     agcac  guuaaa  AACG UUUGG  AUGUC uaaag   u
uuaca     gu      AU    U     AC     C     aau 


mirna_id: tca-mir-3821
hairpin:
augua       c  u           -   -           aua 
     uguguug aa uuAGCAUCCUC CUC UUAGGAAUUUu   u
     ||||||| || ||||||||||| ||| |||||||||||    
     acacggu uu aAUUGUAGGAG GAG GAUCUUUAaag   u
acuaa       u  u           U   U           agu 


mirna_id: tca-mir-3822
hairpin:
aaaau          --   u    a  --     u  c  --------u      u        G UG     UU        acc 
     auaauauuuu  auu uaga cu  gacaa ag ug         aguucg uuCGAGGU U  CACAG  AAUAUUGu   u
     ||||||||||  ||| |||| ||  ||||| || ||         |||||| |||||||| |  |||||  ||||||||    
     uguuauaaaa  uag auuu gg  cuguu uc ac         ucaggu agGCUCCA A  GUGUC  UUAUAacg   u
auagu          au   c    a  uc     u  a  uuuuagguu      u        - GU     UU        aaa 


mirna_id: tca-mir-3823
hairpin:
aauuu  u    ug       GU        U  CAUUu     uu 
     ug gucu  uuuAAAG  CGUGGUUU GG     ugcug  g
     || ||||  |||||||  |||||||| ||     |||||  a
     ac cgga  agguuUC  GCAUCAGA CU     AUGac  a
uuuuu  u    gu       UG        -  ---AU     ua 


mirna_id: tca-mir-3824
hairpin:
augga  aa        cg             GU            ga 
     ca  gacugaua  cggUGUAAAAUUG  UCGACUAUUUgu  a
     ||  ||||||||  |||||||||||||  ||||||||||||  c
     gu  uugacuau  gCCACGUUUUGAC  AGUUGGUAaaua  u
--aca  aa        au             UG            aa 


mirna_id: tca-mir-3811b
hairpin:
uuuau            a UC UG    G    -   uaaaua 
     ccaauucucagg U  U  CUCA GGUU UAC      u
     |||||||||||| |  |  |||| |||| |||       
     gguugggaguCC A  G  GAGU CCAA AUG      g
ugacu            - GA GU    G    C   UAUaaa 


mirna_id: tca-mir-3825
hairpin:
aaaau      g            U      U      UA    aua 
     guuuug ugaagauuUGUU UCUUCU CUGCAC  UUUu   c
     |||||| |||||||||||| |||||| ||||||  ||||    
     uaaaac auuucuGAACAA AGAAGA GGCGUG  Aaaa   u
cuucu      a            C      -      CC    aau 


mirna_id: tca-mir-3826
hairpin:
agggu     ugua  ug                     -   C    A     gu 
     uguga    ac  gggccgguuuCGAGGCGUGGU GGG GGUA UAUua  a
     |||||    ||  ||||||||||||||||||||| ||| |||| |||||  a
     acacu    ug  uuugguuaaGGCUCCGCAUCA CCC CUAU auaau  a
caaac     uuug  gu                     G   -    C     aa 


mirna_id: tca-mir-3827
hairpin:
gcuuc   CU   CU          ----C  C     a 
     UCA  GCG  GCUGCGGAUG     CG AAgau a
     |||  |||  ||||||||||     || ||||| a
     aGU  CGU  UGAUGUUUAC     GC Uucua a
uuuaa   UU   --          UUUUA  C     a 


mirna_id: tca-mir-3811a
hairpin:
uuuau            a UC UG    GA   -           guu 
     ccaauucucagg U  U  CUCA  GUU UACAUAUUuug   u
     |||||||||||| |  |  ||||  ||| |||||||||||   a
     gguuggggguCC A  G  GAGU  CAA AUGUAUaaagu   a
ugacu            - GA GU    GC   C           aua 


mirna_id: tca-mir-3828
hairpin:
ucucu   ag      aac          A    -   A           aa 
     gcg  aacuga   ucgguUCUGA GUGC AGG UAGUuauuuuu  a
     |||  ||||||   |||||||||| |||| ||| |||||||||||  u
     cgu  uugacu   aGCUAAGGCU CAUG UCC AUCGAUAaaag  a
----a   ga      aga          -    C   G           aa 


mirna_id: tca-mir-3829
hairpin:
-gu   a          aC  A      C  U    UU  -u  g 
   uca ucagcagcau  AG GUUCCU GA GCCG  UC  uc a
   ||| ||||||||||  || |||||| || ||||  ||  || g
   agu ggucgucgua  UC CAAGGA CU UGGU  ag  ag u
auu   -          AA  C      A  U    UC  uu  g 


mirna_id: tca-mir-3830
hairpin:
gaa c     g   GG      ACC   --AU   gg  g 
   g guggu CUC  UGCGGC   GGC    uau  ug a
   | ||||| |||  ||||||   |||    |||  || a
   c cgccg gGG  GCGCUG   CCG    aua  ac g
uua -     a   UU      GCU   GUUu   -a  a 


mirna_id: tca-mir-3831
hairpin:
-    g      C         U       C -C   A    -  - u 
 guga cuuuuc AAACAUUGC AUUUUGU G  UCG Uguc cg c c
 |||| |||||| ||||||||| ||||||| |  ||| |||| || |  
 uacu gaaaag uuugUAACG UAAAACA C  AGC AUag gc g c
u    -      -         U       A AC   -    u  u a 


mirna_id: tca-mir-3832
hairpin:
uua a              a    C         C        --   uuu 
   g uuaacuggaguaaa cGGG GAAAUGAUU UGGUGUGU  agu   g
   | |||||||||||||| |||| ||||||||| ||||||||  |||    
   c aauugacuuuauuU GUCC CUUUGCUAA ACCACAua  uua   u
gca g              -    U         A        cu   ucc 


mirna_id: tca-mir-3833
hairpin:
uuuug        -aaCG      CA   -C          --g a 
     uuaguuuu     GCAAGU  CAG  AGGCUguuau   g a
     ||||||||     ||||||  |||  ||||||||||   |  
     aguuaaaa     CGUUCG  GUC  UCCGACAAUG   c a
uguca        gagaa      AA   CU          ACA u 


mirna_id: tca-mir-iab-8
hairpin:
uga     --g         U            G    A  G  Caga 
   aaugu   gccuccugU ACGUAUACUGAA GUAU CC GA    a
   |||||   ||||||||| |||||||||||| |||| || ||     
   uuaca   ugggggaca uGCAUAUGACUU CAUA GG cu    a
guc     auu         -            A    -  A  caca 


mirna_id: tca-mir-3834
hairpin:
--  aug         U      G   UCCacc 
  gg   gaaUGAUGU AUUUUC ACC      a
  ||   ||||||||| |||||| |||      c
  cc   cuUACUGCA UGAAAG UGG      c
cu  --a         -      A   UCUCUc 


mirna_id: tca-mir-3835
hairpin:
uaaaa   -ug     A UGAU   UU     UA        --   ua 
     ucu   uUGCC C    GAA  ACUGC  GAAUcuuc  cuu  a
     |||   ||||| |    |||  |||||  ||||||||  |||   
     aga   AACGG G    CUU  UGACG  CUUAGGAG  gaa  u
--aaa   uua     A ---U   --     --        UU   uu 


mirna_id: tca-mir-3836a
hairpin:
uuuuu      u    c          C      -----      ua 
     gaaaug cugu AGGUCUACCU UGCUUA     AGUUAA  u
     |||||| |||| |||||||||| ||||||     ||||||  u
     cuuugc gaCA UUCAGAUGGA ACGGGU     uuaauu  u
aacuu      c    U          -      CACUa      ua 


mirna_id: tca-mir-308
hairpin:
ucaaa   -  --u   ug  g               G       A     gu 
     ugg gg   aau  gc cccugCGCAGGAUUU CUUGUGA UGGgu  g
     ||| ||   |||  || ||||||||||||||| ||||||| |||||  c
     acc cu   uug  ug gggGCGUGUCUUAAA GGACACU Acuua  u
---ac   a  guu   gu  a               A       A     gu 


mirna_id: tca-mir-3837
hairpin:
aaaAA     GUCUA     -UA      ga    uuu     aa      aaga 
     CAUUU     AUAAA   AAUcuu  gacg   uuuua  cuuguu    c
     |||||     |||||   ||||||  ||||   |||||  ||||||    a
     guGAA     UAUUU   UUAGAA  cugu   agagu  gagcga    u
gacaa     ---AG     UUG      gg    uau     ga      guau 


mirna_id: tca-mir-3836b
hairpin:
uuuuu      u   ccA    C    C      A  U    uuua 
     gaaaug cug   GGUC ACCU UGCUUA GU GAUa    u
     |||||| |||   |||| |||| |||||| || ||||     
     cuuugc gac   UCAG UGGA ACGGGU CA CUau    u
aacuu      c   aUC    A    -      -  -    uaau 


mirna_id: tca-mir-2796
hairpin:
aucga  uu   g  - -a        uauuaac      --   c         -       U       C    Ggaua 
     gc  ucg ug c  gaagccgc       guggug  acg aagaguAGG GGUUUCU UCGGCCU CAGC     a
     ||  ||| || |  ||||||||       ||||||  ||| ||||||||| ||||||| ||||||| ||||      
     cg  agu ac g  cuucggcg       cauuac  ugc uuuuCGUUC UCAAAGG GGCCGGA Guug     u
uuuug  -u   a  u cc        ucgcuuc      gu   a         A       C       U    agaaa 


mirna_id: tca-mir-9c
hairpin:
ugauu   c  -           cu    U     UC   C       a  au 
     uug ua acgcguuauca  UCUU GGUGA  UAG CGUGUGa uu  u
     ||| || |||||||||||  |||| |||||  ||| ||||||| ||  u
     aac au uguguaguaGU  AGAA CCGCU  AUC GCGCAcu aa  u
agguc   a  c           UU    -     GA   U       a  gu 


mirna_id: tca-mir-316
hairpin:
-gc  c       a  gU     UU   G        C  c  uu 
   ca acuugug ac  GUCUU  UCC CUUUGCUG cg ug  c
   || ||||||| ||  |||||  ||| |||||||| || ||   
   gu ugagcac uG  CGGAG  AGG GAGACGAC gc gc  u
cca  -       g  AU     -U   A        C  u  ug 


mirna_id: tca-mir-2944a
hairpin:
aacuc               G     U   -      U  uuca 
     gcugaaacugugGAG AACUA UGG UGUGAU UG    u
     ||||||||||||||| ||||| ||| |||||| ||     
     ugacuuugaCACUUC UUGAU ACC ACACUA ac    u
uuuua               A     U   G      U  uaau 


mirna_id: tca-mir-3838
hairpin:
--aca   aua    -        uag    UUA  CUAA    -U     uaa      uuu    a        
     gag   uucg cgcaaagu   agGU   GC    GUCG  CUUAa   aauguu   aaua uugagaa 
     |||   |||| ||||||||   ||||   ||    ||||  |||||   ||||||   |||| |||||| a
     cuu   aagu guguuucg   UCCA   UG    UAGC  GAGUU   Uuacaa   uugu aauuuua 
uaaaa   cgg    a        CCG    -UC  -UCC    CU     ---      -uc    a        


mirna_id: tca-mir-3839
hairpin:
auaau     -a   -a u       u   --       U      U     -  u 
     gagcg  gau  g aguuuug CAC  AGGAAAU GCGAUA GUUCG aa a
     |||||  |||  | ||||||| |||  ||||||| |||||| ||||| ||  
     uucgu  cua  c uuaaaac gUG  UCCUUUG CGUUGU CAagu uu u
-----     aa   ag -       -   CA       C      U     a  u 


mirna_id: tca-mir-3840
hairpin:
cauca   -    c  ug   G         AA    G    auuu 
     gug aaug uu  uAG GGGUACUGU  GUAC UAcg    u
     ||| |||| ||  ||| |||||||||  |||| ||||     
     cac uugc aa  AUC CUCAUGGCA  CAUG AUgc    u
uuuga   a    -  gU   A         AG    -    aauu 


mirna_id: tca-mir-3841
hairpin:
cucuu   g  u     uuC   C   CU    AUUC         g 
     uuc ca uaucu   GUG GAU  UUCC    CUACUUGuu u
     ||| || |||||   ||| |||  ||||    |||||||||  
     gag gu auaga   CAC CUA  AAGG    GAUgaauag u
cuuuu   g  u     uua   U   UU    -CAU         u 


mirna_id: tca-mir-3842
hairpin:
uccca    ---cu           GG         U  G   g   gg 
     caac     aacaacaAGGA  AAAAACGAG CG ucg cau  c
     ||||     |||||||||||  ||||||||| || ||| |||  a
     guug     uuguuGUUCCU  UUUUUGCUU GC AGc gua  c
uaaaa    cuauu           -A         C  A   -   gu 


mirna_id: tca-mir-279c
hairpin:
-uu  g    --uuaaa          uuu          UU  G       uu  g 
   uc ccgc       uucauauuuu   CGGGUGUUCG  UC AGUCACA  gu a
   || ||||       ||||||||||   ||||||||||  || |||||||  || u
   ag ggcg       agguaugaaG   GCUUACAAGC  AG UCAGUgu  ua u
uuc  -    ccuaaaa          CUC          -U  A       uu  g 


mirna_id: tca-mir-3843
hairpin:
ugugg      ag    c                     Gg  au 
     cugaca  uuuu AGUUGUUGAUGUGGCUUUAGU  ag  u
     ||||||  |||| |||||||||||||||||||||  ||   
     ggcugu  aaaa UUAACGACUGUAUCGAAAUUa  uc  u
uucug      aa    A                     ag  au 


mirna_id: tca-mir-3844
hairpin:
auuua      gagA         GAAAACCC        u    g 
     uguuuu    GGCACCUCA        CACGCaca guuu u
     ||||||    |||||||||        |||||||| ||||  
     acgagA    CCGUGGAGU        GUGUGUGU UAaa a
guuaa      ----         --AAAAUA        -    c 


mirna_id: tca-mir-3477
hairpin:
ugcac  uu   ug     c  UA        UG   AC G     uuug 
     gc  gac  cguuu gu  AUCUCAUU  GUA  U UGAGG    u
     ||  |||  ||||| ||  ||||||||  |||  | |||||     
     ug  uug  guaaa CA  UAGGGUAA  CAU  A ACUcc    u
acuuu  uu   gu     a  GC        GU   -C G     uuau 


mirna_id: tca-mir-3845
hairpin:
cgaaa    -       g  auaaa    -    UCAAU      C  -    Gag     u    c gauua   c 
     uggu gauuuau ua     guug gugg     GUCCCA GC CUUG   uuauc uggc g     agu g
     |||| ||||||| ||     |||| ||||     |||||| || ||||   ||||| |||| |     ||| a
     acua cugggua au     caaC CACC     CAGGGU UG GAAU   ggugg accg c     ucg a
uauug    a       g  accug    G    -----      -  U    Aaa     u    - augug   u 


mirna_id: tca-mir-3846
hairpin:
---   aua      c  -    ------       a  aa   UUCUU   UUAUAA  CU     -    g 
   gga   gaguua uu ccau      ugaugau gu  aUG     GGC      GU  UUGUG Ucaa a
   |||   |||||| || ||||      ||||||| ||  |||     |||      ||  ||||| |||| a
   ccu   cuuaau aa ggua      acuacug ca  uac     CCG      CA  AACAC AGUu u
uaa   ---      c  c    caguca       -  gc   uaACU   ---UUG  UU     C    a 


mirna_id: tca-mir-3847
hairpin:
gaagu    u     U        UUUAUUU       ca       c 
     gcug uuaaa UCGAACUU       AAUUUgg  augugug g
     |||| ||||| ||||||||       |||||||  ||||||| a
     cggc aauuu agcUUGGA       UUAAGCU  ugcacau g
aaauu    c     u        -CUAGCU       -C       u 


mirna_id: tca-mir-3848
hairpin:
uauua   gc    -    GC       A    ---        u 
     ucc  ucua uGUA  GGUAUAU AGGU   UAgcgcgc g
     |||  |||| ||||  ||||||| ||||   |||||||| a
     agg  aggu acAU  UCGUGUA UUCA   AUUgugcg c
-uuaa   -a    u    --       A    CCC        c 


mirna_id: tca-mir-2944b
hairpin:
acuuc        u      uu     -      A G          gauu 
     auuucgca aaugca  UAAGG AACUAC G UGUGAUGUGu    u
     |||||||| ||||||  ||||| |||||| | ||||||||||    c
     uaaagugu uuaugu  AUUCC UUGAUG C ACACUAUgca    a
aacuc        -      -C     G      C G          aauu 


mirna_id: tca-mir-9d
hairpin:
aauac   u   u                -    A   -      aac 
     guc acu uauauuuCUUUGGUGA UCUA CUU AUGAuu   u
     ||| ||| |||||||||||||||| |||| ||| ||||||   u
     cgg ugg guauaaaGAAACCACU AGAU GAA UAcuga   u
----a   u   u                U    C   A      aua 


mirna_id: tca-mir-309a
hairpin:
aaaac     -u     A  UG    C       C     auaa 
     gcuaa  cuguu GA  AACU GACUCGG Ugaug    a
     |||||  ||||| ||  |||| ||||||| |||||     
     cgauu  gGUAA CU  UUGA UUGGGUC ACUac    a
aaaau     uu     C  GU    C       -     aaaa 


mirna_id: tca-mir-3849
hairpin:
guaac         u c         AAC             uuuau 
     uguucgaaa g UGACAUUUU   CAUAGUGCUguug     a
     ||||||||| | |||||||||   |||||||||||||     u
     acaagcuuu C GCUGUAAAG   GUGUUACGAuaau     u
aucaa         u U         GUU             uaaac 


mirna_id: tca-mir-3850
hairpin:
guaau    ------------     --u    u                AAac  g   gag   a uc    aa      - aa 
     ugca            uuuga   agau AGGCCGAUAUUAGUCU    aa guu   acu u  uaua  uuauua c  a
     ||||            |||||   |||| ||||||||||||||||    || |||   ||| |  ||||  |||||| |   
     acgu            aagcu   uuua uuUGGUUGUAAUCAGA    UU uaa   uga g  auau  aauaau g  a
aaaau    uuuuuuucauaa     cau    c                --GC  g   -aa   c ga    gg      c cu 


mirna_id: tca-mir-3851b
hairpin:
cggac    ca        auu  a            GUA        - u  u 
     gaau  uaaauuug   ac AGUUGAUUUGGA   GUACUAUG g gu u
     ||||  ||||||||   || ||||||||||||   |||||||| | || g
     cuua  auuuaaac   uG UCAACUAAGCCU   CAUGAUac c ca g
aacaa    -a        aau  C            -UG        a u  u 


mirna_id: tca-mir-3851a-1
hairpin:
cggac     a        gc c                A        guuuug 
     gaauu ugaauuug  g cgAGUUGAUUUGGAGU GUACUAUG      g
     ||||| ||||||||  | |||||||||||||||| ||||||||       
     cuuaa auuuaaac  u GCUCAGCUAAGCCUUA CAUGAUac      g
aacaa     -        aa u                -        acucau 


mirna_id: tca-mir-3852
hairpin:
--cuccaugacgucacacuc         ----   C UU       uc 
                    uuaauACGG    GGC U  AAGGAGU  u
                    |||||||||    ||| |  |||||||   
                    aauuAUGUU    CCG G  UUCUucg  g
cagcaacgcaguggcgcuau         AAUA   C UC       gc 


mirna_id: tca-mir-3853
hairpin:
uu  -    a   a        ug   cu  U          U    U    u   u 
  uc auga aaa uauccuug  cau  uG GUGUAUUUUG GAAA GCUA agu g
  || |||| ||| ||||||||  |||  || |||||||||| |||| |||| ||| a
  gg uauu uuu gugggaac  gua  AC CGUAUAAAAC UUUU UGau uua a
-u  c    g   a        gu   au  U          U    U    u   u 


mirna_id: tca-mir-3854
hairpin:
cgacA       - CC   U    -      gcau 
     CCACAAU C  AGC CCAC auuauu    u
     ||||||| |  ||| |||| ||||||     
     GGUGUUA G  UUG GGUG Uaauaa    u
uuaaa       U AU   C    A      aaac 


mirna_id: tca-mir-3851a-2
hairpin:
cggac     a        gc c                A        guuuug 
     gaauu ugaauuug  g ugAGUUGAUUUGGAGU GUACUAUG      g
     ||||| ||||||||  | |||||||||||||||| ||||||||       
     cuuaa auuuaaac  u GCUCAGCUAAGCCUUA CAUGAUac      g
aacaa     -        aa u                -        acucau 


mirna_id: tca-mir-3855
hairpin:
aguuu         GA             U   aa 
     uuUUCGUCA  UUUGUUAAAGGUU CGC  u
     |||||||||  ||||||||||||| |||  U
     aaaggCAGU  AAACGGUUUUUAA GCG  A
ccuau         -G             U   CA 


mirna_id: tca-mir-87b
hairpin:
----c      ugccugcc               -        UU    ugca 
     ggggga        gucgacACGCUUGAA CUUUGUUU  CCUg    u
     ||||||        ||||||||||||||| ||||||||  ||||     
     cucucu        caGUUGUGUGGACUU GAAACGAG  Ggau    u
gacua      ----caau               A        -U    cuua 


mirna_id: tca-mir-3856
hairpin:
gugug uu         --           --------     cu 
     g  uuuuUGCAA  GAAAGUCAUUU        GAAca  u
     |  |||||||||  |||||||||||        |||||  u
     c  aAAGGCGUU  UUUUUAGUGAg        uuugu  c
cugaa uu         GC           ucaaacgc     aa 


mirna_id: tca-mir-3851c
hairpin:
ccgga     cau       gc c               U         -  uuu 
     cgaau   gaauuug  g cgAGUUGAUUUGGAG CGUACUaug gu   u
     |||||   |||||||  | ||||||||||||||| ||||||||| ||   g
     gcuua   uuuaaac  u GCUCAGCUAAGCCUU GCAUGAUac cg   g
uaaca     aau       aa u               -         a  cau 


mirna_id: tca-mir-3857
hairpin:
agaac     a   g         U  C    U  UAU  -   G    g a 
     gagaa uug gcuguggUG GC UUGA AC   CC CAC Uguu c g
     ||||| ||| ||||||||| || |||| ||   || ||| |||| | g
     cuuuu aac cgguacuaC CG AACU UG   GG GUG Acaa g a
guaua     -   g         U  U    C  --U  U   G    g u 


mirna_id: tca-mir-3049
hairpin:
augug   g      acga    gag    g  g -agg acauggg     c    g    C     GA    UGC         c uu 
     gug aacgau    uggu   uggg gc c    g       ggcgc acau gggU GGGAA  CAGU   GGCGGAuuu g  u
     ||| ||||||    ||||   |||| || |    |       ||||| |||| |||| |||||  ||||   ||||||||| |   
     cau uuguug    aucg   acuc cg g    c       ccgug ugug cccg CCCUU  GUCG   UUGCCUgaa c  u
----a   -      gagg    --g    g  g ggaa gacggag     c    g    a     AC    --C         - uu 


mirna_id: tca-mir-3851d
hairpin:
auacu       guucc  a            u  uu  uacuc         - UU   AA  G     u  ac      uaaauucaac 
     gcuaaug     gg gucguacuaugg uu  ga     acaUAGUAC G  CCG  UC ACUCG ua  aaauuu          a
     |||||||     || |||||||||||| ||  ||     ||||||||| |  |||  || ||||| ||  ||||||          a
     cgguugu     cc cggcaugauacc ag  uu     ugUGUCAUG U  GGU  AG UGAgu au  uuuaaa          u
-----       ----a  -            c  uu  --uaa         G GG   AC  G     u  aa      uuaaccaaau 


mirna_id: tca-mir-3851e
hairpin:
u       -    -gc  cgC            U         guuuuu 
 guuugaa uuug   gc   GUUGAUUUGGAG CGUACUAUG      g
 ||||||| ||||   ||   |||||||||||| |||||||||       
 uaaauuu aaac   uG   CAGCUAAGCCUU GCAUGAUac      g
-       u    aau  -AU            -         acucau 


mirna_id: tca-mir-3858
hairpin:
    u    U       -  UUU       ggcc 
guuu uuAG GAAGCGA AG   UUUCauu    a
|||| |||| ||||||| ||   |||||||    a
uaaa AAUC CUUCGUU UC   AAAGUaa    u
    u    U       C  -UC       aaaa 


mirna_id: tca-mir-3851f
hairpin:
u       -    gc c  C            U     g   guuuuu 
 guuugaa uuug  g cg GUUGAUUUGGAG CGUAc aug      g
 ||||||| ||||  | || |||||||||||| ||||| |||       
 uaaauuu aaac  u GC CAGCUAAGCCUU GCAUG Uac      g
-       u    aa u  U            -     A   acucau 


mirna_id: tca-mir-92c
hairpin:
uuua   -        --  a  --a     c  u    uG     U    U      A    uuau 
    cuu aacauuuu  cg gg   uggaa gg cggu  GGUCG GAUU GUGCAA uaug    u
    ||| ||||||||  || ||   ||||| || ||||  ||||| |||| |||||| ||||     
    gag uugugggg  gc cc   accuu uc guCA  CCGGC CUGA CACGUU AUac    u
-agg   g        cc  a  agg     c  -    GU     C    C      -    uugc 


mirna_id: tca-mir-279d
hairpin:
aucaa    -   --------     aaaccaa       a  g   U     U             C   -   u 
     gagu ggc        cccaa       ugaaaac cu ugu GGCGA UGUGGGUUUAGUC ACG uuu a
     |||| |||        |||||       ||||||| || ||| ||||| ||||||||||||| ||| |||  
     cuca ccg        ggguu       auuuuug ga AUA CUGCU AUACCUAGAUCAG Ugc aaa g
accuc    a   aacacccc     cagcacg       -  G   U     C             -   c   u 


mirna_id: tca-mir-3859
hairpin:
cacAC      CAUUUA   Cg   g      guc 
     CCCACA      AGC  gcc uuucau   u
     ||||||      |||  ||| ||||||    
     GGGUGU      UCG  UGG GAAGua   u
uacaa      ---UGC   UG   A      aaa 


mirna_id: tca-mir-3860
hairpin:
uagUA      GACGA   AA     u    uu 
     GCACUG     UCU  acaug cuuc  u
     ||||||     |||  ||||| ||||   
     CGUGAC     GGA  UGUGU gaag  a
uaaaA      --AAA   AA     U    ua 


mirna_id: tca-mir-375
hairpin:
ucaaa            U         u  -  aau 
     cugACUUGAGCC UGCGAAUAA uc cu   u
     |||||||||||| ||||||||| || ||   u
     gAUUGAGCUCGG GUGCUUGUU ag ga   a
aaaua            U         U  c  gaa 


mirna_id: tca-mir-3861
hairpin:
guuua u ug         gua uu          UU             uuu 
     g g  uuucgaagg   c  aAUGGAAUUA  UGGUAUCaauuga   u
     | |  |||||||||   |  ||||||||||  |||||||||||||    
     c u  aaagcuuuu   G  UUACCUUAAU  ACCAUGGUUaauu   c
gugua u gu         aag CU          UU             uag 


mirna_id: tca-mir-2788
hairpin:
gacau     u     au            U  C      U  cucaa 
     uuguu augca  uuUGGGGUUUCU AG GGCAUU gc     a
     ||||| |||||  |||||||||||| || |||||| ||     u
     agcag uacgu  aaaCCCUAAAGG UC CCGUAA Cg     u
aacuc     -     ac            U  -      -  ucaca 


mirna_id: tca-mir-3862
hairpin:
ugcaa     cu    a  GG       UC          u  u 
     gguug  cgaa uU  GCAAAAG  CGCCUGAACA uu u
     |||||  |||| ||  |||||||  |||||||||| ||  
     ccaac  guuu AG  CGUUUUC  GCGGACUUgu aa c
caaca     cg    C  UA       UC          u  u 


mirna_id: tca-mir-29
hairpin:
uuug     gaacaauag    a  -      cuu    c    U            G  AG   uu 
    uggug         uugu gg auuugg   uggg ACUG UUUCGUGUGGUG UG  auu  a
    |||||         |||| || ||||||   |||| |||| |||||||||||| ||  |||  u
    accac         agcg cc uaaacc   guuC UGAC AAAGUAUACCAC AU  uag  u
guga     -----auaa    a  a      -au    U    U            G  cu   uu 


mirna_id: tca-mir-252a
hairpin:
aaaga    -      aC        A U  C       ua a 
     cugu ccuguu  UAAGUACU G GC GCAGGag  c u
     |||| ||||||  |||||||| | || |||||||  |  
     gaca ggguaa  AUUCGUGA C CG CGUCCuc  g u
aguaa    c      CU        A U  U       ca c 


mirna_id: tca-mir-252b
hairpin:
gccuc ug    cc      U         C     A  U   guu 
     u  ucca  cgguaU AAGUAGUUG GCCGA GG gau   u
     |  ||||  |||||| ||||||||| ||||| || |||   u
     a  aggu  gccauA UUCGUCGGU UGGCU CC cua   u
cuaaa gu    ac      U         C     -  U   aag 


mirna_id: tca-mir-3863
hairpin:
ugcca      ga     U            C    U    uuuga 
     gggugu  agaau GAUCAAGUAGCG CGCU GGUC     a
     ||||||  ||||| |||||||||||| |||| ||||      
     ccuacg  ucuUA CUAGUUCGUUGC GCGA CUag     u
uaaca      uc     C            U    -    uuagu 


mirna_id: tca-mir-2944c
hairpin:
gccga    cac  a         gc   A   -    U    -          auu 
     gcga   uc gggaaucug  uuG AGG AACU CUGG UGUGAUAUGu   u
     ||||   || |||||||||  ||| ||| |||| |||| ||||||||||    
     cguu   ag cccuugggu  agc uCC UUGA GACC ACACUAUaua   a
gacaa    ---  -         aa   a   A    U    G          acu 


mirna_id: tca-mir-3864
hairpin:
aguga   ggG         -GCAU     -          
     ugu   GCGACAUAG     GGUUU GAGUUUGuu 
     |||   |||||||||     ||||| |||||||| u
     aua   CGCUGUAUC     CCAAA Uucaaauaa 
gauua   aga         AUCCU     G          


mirna_id: tca-mir-3865
hairpin:
uccaa          uaauaaauuaA      --AU  UGA          gcc 
     aauuguuuuu           GGCAAG    CU   GCUGgugugu   g
     ||||||||||           ||||||    ||   ||||||||||   u
     uuaauaaaga           cCGUUC    GG   UGACCACACG   u
-----          ---uaaaaaga      CUUU  -UG          AUU 


mirna_id: tca-mir-279e
hairpin:
cggug      uc   -      C       A     UUGUU     -   g 
     gagcuc  ggu guaaGC AGUGUUC GUCUA     UCAca uug u
     ||||||  ||| |||||| ||||||| |||||     ||||| |||  
     uuuggg  cca CGUUCG UCACAAG UAGAU     AGUgu agc u
----g      -u   a      C       C     ----C     u   u 


mirna_id: tca-mir-1175
hairpin:
cgcuu   u       ugu     A  -     C   G UC   U    uggu 
     uga cgagcuc   aaagu AG UGGAG AGU G  UCU CACu    u
     ||| |||||||   ||||| || ||||| ||| |  ||| ||||     
     auu gcucgag   uuuua UC ACCUC UCA C  AGA GUga    u
gcaac   u       -uu     C  U     C   A UU   -    uauu 


mirna_id: tca-mir-750
hairpin:
agaaa     g    c   G       -         UC   UGau 
     gcaaa ggcc uuG GUGGAAG GUUGGAUCU  GCA    u
     ||||| |||| ||| ||||||| |||||||||  |||     
     cguuu cugG AGU UACCUUC CAAUCUAGA  Cgu    c
acaac     a    C   A       U         -C   ugaa 


mirna_id: tca-mir-989
hairpin:
uuuuu      aa  u cC       G       A     cau  u 
     gcuccc  gg c  GCCACUA GUCGCAU ACACg   ug c
     ||||||  || |  ||||||| ||||||| |||||   ||  
     ugaggg  uc g  uGGUGAU CAGUGUA UGUgc   ac a
uccgu      ga  u ua       G       G     --c  a 


mirna_id: tca-mir-3866
hairpin:
guaau         --------      UU GAUC     -   a  u 
     uuuuuuuUC        GCACAG  U    AAUCG Gua cc u
     |||||||||        ||||||  |    ||||| ||| || g
     aaaagaagg        CGUGUC  A    UUGGC CAU GG a
cgagu         uaauaaaU      CU -AUA     U   C  u 


mirna_id: tca-mir-3867
hairpin:
-ucc     u     ga  A A UG  -   A         ---   a 
    gcccc auaag  CC C G  GA AGC GGGAACGGU   AUC u
    ||||| |||||  || | |  || ||| |||||||||   ||| u
    ugggg uguuc  GG G C  UU UUG CCCUUGCCA   uag u
gaca     -     gg  C A GU  A   -         CAU   c 


mirna_id: tca-mir-3868
hairpin:
guaaa            ACC   ACC   A  -UA      a     ucuuuuu 
     cggaauuaaagu   AGC   AGU UG   UUuugu ugcau       a
     ||||||||||||   |||   ||| ||   |||||| |||||       c
     gucuuaguUUUA   UUG   UCA AC   agaaca acgua       a
uggua            -AU   AAA   -  UAa      -     uuuaaca 


mirna_id: tca-mir-3869
hairpin:
uaauu        AU         AA     a      
     ACUGAUAG  GGUCUCGAA  GCCuu uagcg 
     ||||||||  |||||||||  ||||| |||| a
     UGAUUGUC  CCAGAGCUU  Cgggg guugu 
ucCAU        -C         -A     -      


mirna_id: tca-mir-3870
hairpin:
gccaa    A     AA A  AAAAa    ---  a   uac 
     uUCG GGCAC  G GG     gagc   gc aaa   a
     |||| |||||  | ||     ||||   || |||    
     AGGC CCGUG  C CC     cucg   cg uuu   c
uuaUA    -     AA A  --GAg    agg  g   caa 


mirna_id: tca-mir-3871
hairpin:
auccc   au       UCU  -CU    C  Cucccu 
     aca  cccGAUU   GC   UGUG CG      c
     |||  |||||||   ||   |||| ||      c
     ugu  GGGCUAA   CG   ACAC gc      u
caccc   aC       -UC  UUU    c  ccuuaa 


mirna_id: tca-mir-3872
hairpin:
g   -A    U -UAC  CC         ----   --u     u  gcg 
 UGA  GUGA C    AG  AGAAAUGCA    uua   uaugc cu   a
 |||  |||| |    ||  |||||||||    |||   ||||| ||    
 acU  UACU G    UC  UUUUUACGU    aau   auacg ga   a
-   CG    U UUAA  AU         uuuu   ucu     u  aug 


mirna_id: tca-mir-3873
hairpin:
uuauu         -CGA   UUA       u       uua      ua   a   uuaaaa 
     aguuguuGC    AUG   UAAGGUU gcauucg   ggaaua  uua uug      c
     |||||||||    |||   ||||||| |||||||   ||||||  ||| |||       
     uuaauaaug    UAC   AUUUUAA UGUAagu   ucuugu  aau aac      g
ccaau         uUAA   UCG       -       ---      ua   a   cuaaaa 


mirna_id: tca-mir-3874
hairpin:
agcaa   -   ---    g   ga      CU   -A    A   Gacu   cacug    --a      ---a  aaa 
     gug gca   gauu gcu  ugGAUG  GUC  UAAU AGG    cga     guuc   gauaag    gc   c
     ||| |||   |||| |||  ||||||  |||  |||| |||    |||     ||||   ||||||    ||    
     cac cgu   cuag cga  gccUAU  CAG  GUUA UCC    GCu     uagg   cuauuc    cg   a
--aca   a   uag    g   -a      -U   CA    C   ----   --aaa    gug      aaaa  cac 


mirna_id: tca-mir-3875
hairpin:
cacuu    -C      U   UAA     aga   g uu 
     GCGU  UUUAGC CAA   Auauu   ggu c  u
     ||||  |||||| |||   |||||   ||| |  a
     CGCG  AGAUCG GUU   UAUaa   ccg g  u
uuaug    AU      C   ---     ---   g uu 


mirna_id: tca-mir-3876
hairpin:
uuucG               -UA   ccaa 
     UUUUAUUUUACCACU   Cua    g
     |||||||||||||||   |||     
     aGAGUAAAAUGGUGA   GAU    u
aaaaa               CCA   cagu 


mirna_id: tca-mir-3877
hairpin:
gucaA       AAAAA   -            c 
     CCUUCCA     GCA CUCguuugguua u
     |||||||     ||| |||||||||||| a
     GGAAGGU     UGU GAGUGAACCAAu a
agaga       --CAC   U            a 


mirna_id: tca-mir-3878
hairpin:
ugaua    uggU G     GA     UU  a     --auu  uac 
     ggug    G ACGGA  ACUAA  GU uuaaa     gc   c
     ||||    | |||||  |||||  || |||||     ||   u
     cuau    U UGCCU  UGAUU  UA aguuu     cg   a
----a    -uGU G     -G     UU  a     agcuu  uuc 


mirna_id: tca-mir-3879
hairpin:
caauU     A     U      ca      c  u 
     GGGUU UUGUG GCCGGU  uuacau au a
     ||||| ||||| ||||||  |||||| || c
     CCCGA AAUAC CGGCCA  Aaugua ug a
caaCU     -     -      --      c  g 


mirna_id: tca-mir-998
hairpin:
gggac  --uuu    cu   u  UA      UU    U G     ugu 
     gc     gcca  acg ug  CUGAAU  CAUG G GCugc   u
     ||     ||||  ||| ||  ||||||  |||| | |||||    
     cg     uggu  ugc AC  GACUUA  GUAC C CGAUg   u
ucaau  ucuau    -u   u  UC      GG    - A     cgu 


mirna_id: tca-mir-11
hairpin:
caaac  uuaca            -u           A      CC    u  g 
     gc     uuguaaaugcau  cUGGGAUUCUG CUGUGA  UGUg gu u
     ||     ||||||||||||  ||||||||||| ||||||  |||| || c
     cg     gacauuugcgua  GAUCUUGAGAC GACACU  ACac ua u
cucuu  --uuc            UC           G      --    u  g 


mirna_id: tca-mir-3880
hairpin:
cuuca ug  UC   G AA   AA   U   g       -ug    cu  gu   
     u  gg  CAA A  CGA  GAA UCG cgauuuu   uccu  ga  cu 
     |  ||  ||| |  |||  ||| ||| |||||||   ||||  ||  | u
     A  CC  GUU U  GCU  CUU AGC GUuagag   aggg  cu  ga 
cauaa GU  -U   G -A   GC   C   -       uua    -c  ug   


mirna_id: tca-mir-3881
hairpin:
acgc    uc      UUU      UGUU   UCU    gau       
    agac  uUCGAG   AAAUUA    GAG   UUcc   agcgau 
    ||||  ||||||   ||||||    |||   ||||   ||||| c
    ucug  aGGCUC   UUUAAU    UUC   AGGG   UCGUuu 
cuuu    -u      ---      ----   --U    AUU       


mirna_id: tca-mir-3882
hairpin:
ucucc  a -U  ACA         -------   A       guu 
     gc c  UG   CAUCGGUGU       UCU CCAUGCA   c
     || |  ||   |||||||||       ||| |||||||   c
     cg g  AC   GUAGCCACA       AGA GGUgcgu   u
uuugu  a uc  --G         AUCGCUA   A       guc 


mirna_id: tca-mir-3883
hairpin:
u  uc   U    ACC  C     C   -     Cg 
 uc  cca AAGA   CU GUUAG GAG UUUGG  a
 ||  ||| ||||   || ||||| ||| |||||  a
 ag  gGU UUCU   GA CAAUU CUC AAACC  g
u  gu   -    -AC  -     U   C     Uc 


mirna_id: tca-mir-980
hairpin:
uugac   ug g     caG     G   UG        a  g   g 
     aac  g ugccg   GGCUC UCA  GGGUAGCu gc ugu a
     |||  | |||||   ||||| |||  |||||||| || ||| u
     uug  u acggu   UCGGG AGU  UCCGUCGA cg aca u
auuuu   gu -     aUA     A   UU        C  -   a 


mirna_id: tca-mir-3884
hairpin:
aaaAC   A    AC   UU  CUG     uac 
     UGA GCUG  GAG  AA   CCGGg   u
     ||| ||||  |||  ||   |||||    
     ACU CGAC  CUU  UU   GGCCC   u
gaagA   C    CC   UU  --A     Uug 


mirna_id: tca-mir-3885
hairpin:
aacaa        --GC     C G   a       u uu    cu 
     cgAAGGCG    GGCGG G CCG ugcgcuu u  uuca  g
     ||||||||    ||||| | ||| ||||||| |  ||||  u
     gcuUUUGC    UUGUU U GGc gugugaa g  aagu  u
aaugg        AUUU     U G   -       c gu    aa 


mirna_id: tca-mir-3886
hairpin:
uacaa   -  A  -  GCUU    A        gg  g  g 
     cUC AC GC GA    UGAC Ggugauga  gu gu a
     ||| || || ||    |||| ||||||||  || ||  
     ggg uG UG CU    AUUG CUAUuauu  cg ua g
ggcga   a  G  A  AUAU    G        ag  g  g 


mirna_id: tca-mir-3887
hairpin:
gagau       UC       C  a  c ------u     aa 
     GGGGUUG  AUAAAAA GC cc c       uauuu  c
     |||||||  ||||||| || || |       |||||   
     ccucAAC  UAUUUUU CG GG g       auaag  a
guaau       CU       C  C  U uuccaau     ca 


mirna_id: tca-mir-3888
hairpin:
-g  aaa   -     U       --         C  uaaaaauaa         a  gaa 
  ga   uuu cgcuG GCUUUGA  AUGUCACGC ga         uuuuuguau uu   u
  ||   ||| ||||| |||||||  ||||||||| ||         ||||||||| ||    
  cu   aag gcgAU UGGAAUU  UGCAGUGCg cu         aaaagcaua ag   a
ca  aug   u     -       GA         c  uuaacuuaa         g  uaa 


mirna_id: tca-mir-3889
hairpin:
uguaa        c     -     U     UC           U ga 
     uaaacuca aaaau gcgAC UGUUC  UCUGUAUUGUG G  g
     |||||||| ||||| ||||| |||||  ||||||||||| |   
     auuugagu uuuug CGCUG ACAAG  AGGCAUGAUac c  u
uucgc        -     u     C     UU           u gu 


mirna_id: tca-mir-3890
hairpin:
caccc     uua           cgaa      -  gaauu  a          CUGCGG    uua    c 
     uguag   uaacaugggau    aauaua cu     ag GCAGCUGUAU      AACu   guua a
     |||||   |||||||||||    |||||| ||     || ||||||||||      ||||   |||| u
     acauu   guuguauucug    uuguau ga     uc cGUCGGCAUG      UUGG   CGAu u
uacac     uug           ----      u  aauuu  a          ----UA    --C    u 


mirna_id: tca-mir-3891
hairpin:
uc  -a     --A     UAA  UG CG AAA    -uuacug    a 
  gg  gaugC   GAGGU   UG  U  U   acac       uaau a
  ||  |||||   |||||   ||  |  |   ||||       ||||  
  cc  cuaCG   CUCCA   AU  G  g   ugug       auug a
-a  aa     CCA     UAA  GU Au ---    uaaaaua    a 


mirna_id: tca-mir-3791
hairpin:
aucaa         uC         AUUA         CGa 
     guuaaacgu  GGUGGUUUU    CGGUGGUUG   u
     |||||||||  |||||||||    |||||||||   u
     caauuugua  CUACUAAAG    GCCACUaac   u
uaaac         cU         AUGG         auu 


mirna_id: tca-mir-3892
hairpin:
auuuc    -A    UG   -   -AAC      auuu 
     guuA  CCCC  GUG GAA    CCauac    g
     ||||  ||||  ||| |||    ||||||     
     uaau  GGGG  UAC CUU    GGUGUG    u
cuuaa    aC    GU   A   AAUU      AAuu 


mirna_id: tca-mir-309b
hairpin:
cauuu  c  uc     uC   U             U      a 
     gc ca  acauc  GAC AACUCGAUUCAGU Gauguu a
     || ||  |||||  ||| ||||||||||||| |||||| u
     cg gu  uguag  CUG UUGAGUUGGGUCA CUauag u
cuacc  u  uu     cU   U             -      a 


mirna_id: tca-mir-3893
hairpin:
   uu     u   G       -          CA   aau 
ggu  uauuu uCC AUGUUAC GACGGCUUUA  UGA   u
|||  ||||| ||| ||||||| ||||||||||  |||    
uca  auaaa AGG UGCAAUG CUGUCGAAAU  Acu   u
   uu     C   -       A          --   aag 


mirna_id: tca-mir-3894
hairpin:
ugaaa        UU        ---UAA   Ag   au   ua g 
     uuugcGGU  UAAUUCCA      UGC  acg  uuu  c a
     ||||||||  ||||||||      |||  |||  |||  |  
     aaaugUUA  AUUAAGGU      GCG  ugc  aag  g c
aaaac        --        UAUUUG   ag   --   gc g 


mirna_id: tca-mir-3895
hairpin:
cgau    UG  U     ACGA    a     cuagcucucgaagu    cu 
    uuAU  AG UGAUU    UGGu ucggu              uccg  g
    ||||  || |||||    |||| |||||              ||||  u
    aaua  UC GCUAA    GCCA GGCca              aggc  a
ugau    GU  C     ---G    A     --------------    ua 


mirna_id: tca-mir-3896
hairpin:
ccgau      -A    U  AG  AAA   C  - gacg g   --  u    a 
     uuugac  UAUC CG  UG   UUC Aa c    g cug  gg cucc a
     ||||||  |||| ||  ||   ||| || |    | |||  || ||||  
     aaacUG  AUAG GC  AC   AAg uu g    c gac  uc gagg c
uuuuu      GA    -  AA  GUC   a  a auca a   aa  -    c 


mirna_id: tca-mir-193
hairpin:
-  aaa     --c     gg      C    -     U    UGaucau 
 gc   cuggu   guaau  uuUGGG CUUA UAGGU CAGU       u
 ||   |||||   |||||  |||||| |||| ||||| ||||       u
 cg   ggccg   cauua  GAACCC GAAU GUCCG GUCA       u
u  -aa     uua     uU      U    U     -    Ucgaaau 


mirna_id: tca-mir-3897
hairpin:
caaaa     uacu                  G       - u 
     guguu    uCACUCUCGCCUUCGCCG CAuggcg c g
     |||||    |||||||||||||||||| ||||||| | a
     cgcgg    ggugGGGGUGGGGGUGGU GUGCcgc g u
-----     -cac                  G       c g 


mirna_id: tca-mir-3898
hairpin:
gaccu     -uu  UGUA    C      CAuguu     a   g  -  c 
     ugcga   GC    CCGG UCAUAG      uaauu ucu cg cg u
     |||||   ||    |||| ||||||      ||||| ||| || ||  
     acgUU   UG    GGCC AGUAUu      guuga aga gu gu a
gacgu     CAU  -UAG    A      ---aau     -   g  a  u 


mirna_id: tca-mir-3899
hairpin:
uauaa   aCU     A CC    UU  ga 
     ccc   UCGAG G  CGCC  GG  c
     |||   ||||| |  ||||  ||   
     GGG   AGCUC C  GCGG  uc  a
aaaUA   -AU     A -A    cu  ag 


mirna_id: tca-mir-3900
hairpin:
auuuu  c      uucU  G   G         U 
     gu ccauuu    GG GGU GCACCUCCU G
     || ||||||    || ||| ||||||||| c
     ca gguaaG    UC CUA UGUGGAGGA g
gucau  c      --UU  G   G         a 


mirna_id: tca-mir-3901
hairpin:
cuuau   cu    -AUU    UUU       C     uc        c     --uu    ua  u 
     gug  aagC    UUGA   UAUGAGU aaaaa  uaauaaaa gauau    guaa  aa u
     |||  ||||    ||||   ||||||| |||||  |||||||| |||||    ||||  || g
     cac  uuUG    AACU   AUAUUUA uuuuu  auuauuuu uuaug    uauu  uu a
uaaau   -u    CAUU    -UU       C     -u        -     uuuc    gc  c 


mirna_id: tca-mir-3902
hairpin:
cc  c                  AA    -C    U             aa 
  gu auauaaccgugguuAUAU  CCGG  AUAU ACcaugguuauau  c
  || ||||||||||||||||||  ||||  |||| |||||||||||||  c
  ca uauauugguaCCAAUAUA  GGCU  UAUA ugguaccaauaua  a
gc  a                  -C    AA    u             cg 


mirna_id: tca-mir-3903
hairpin:
cu   --     u     -      -    aa   --cca      u 
  ucu  auuua uuaug uugggg agug  gug     uuuuac u
  |||  ||||| ||||| |||||| ||||  |||     |||||| u
  aga  ugaau aaugc AACCUU UCAU  CAU     aaaaug u
--   uc     u     c      A    -A   UAUAc      a 


mirna_id: tca-mir-3904
hairpin:
auaaa     u      c      -----         ----       G uguaa      uaag 
     aucau aguuau uuaaAA     GAUAUUAUU    AAUAAGU c     ucuauu    c
     ||||| |||||| ||||||     |||||||||    ||||||| |     ||||||     
     uagug ucagug gguuuu     UUGUAAUAA    UUAUUCa g     agauaa    u
acaaa     -      u      uaauu         AAAU       - --uaa      uuac 


mirna_id: tca-mir-3905
hairpin:
uuauc    ucuca   -g  g aa    -     -AA     A  C  C       ----      
     gggu     aac  gc g  cugg cggGG   GGGGG GC GC UUGccuu    cggcc 
     ||||     |||  || |  |||| |||||   ||||| || || |||||||    |||| g
     ccca     uug  cg u  gacc gcccc   ccuuc cg cg aacggaa    gccgg 
aacuc    -cuca   ag  g gc    a     aaa     a  a  -       ccac      


mirna_id: tca-mir-3819
hairpin:
agcua      -------------u         UUCGUAU    A  C   uu  uuc        
     ggaagc              aacagguAA       UAAU UU CAu  ag   uggagca 
     ||||||              |||||||||       |||| || |||  ||   |||||| a
     ccuucg              uuguuuauu       auua aa gua  uc   aucucgg 
aauca      uaaaaauguaguuu         -------    a  u   -u  -uu        


mirna_id: dre-mir-3906
hairpin:
  u      a  gu    c       aaacucuuauuccagugggacuug 
ga agaccu ca  gaag ucugcau                        u
|| |||||| ||  |||| |||||||                        c
cu uuugga gu  uUUU AGACGUA                        c
  c      -  --    -       AGUUUUACGAAAAuagacuggaaa 


mirna_id: hsa-mir-3180-4
hairpin:
          --a       u    -c     aac   ---U     G A  U         -- -  g       g   ac 
gcuccgcccc   cgucgca gcgc  ccggg   gcg    GGGGC G GC UCCGGAGgc  c cc cucugcu ccg  c
||||||||||   ||||||| ||||  |||||   |||    ||||| | || |||||||||  | || ||||||| |||   
cgaggcgggg   gcggugu cgcg  ggucc   cgc    cccug c cg aggccuccg  g gg gaggcga ggu  c
          gaa       -    cu     ggu   uacu     a -  u         aa u  -       -   gu 


mirna_id: hsa-mir-3180-5
hairpin:
          --a       u    -c     aac   ---U     G A  U         cc      g    - g    
gcuccgcccc   cgucgca gcgc  ccggg   gcg    GGGGC G GC UCCGGAGgc  cgcccu cugc c acc 
||||||||||   ||||||| ||||  |||||   |||    ||||| | || |||||||||  |||||| |||| | || c
cgaggcgggg   gcggugu cgcg  ggccc   cgc    cccug c cg aggccuccg  guggga ggcg g ugu 
          gaa       -    cu     ggu   uacu     a -  u         aa      -    a g    


mirna_id: hsa-mir-3907
hairpin:
       aaa   gu   ugu       cau   uacg     cau       -   u    g     c ag      cc  ag 
ggguugg   gcu  agg   ggagggg   gga    ggggc   gagggug ggg ccag cugga c  gccugc  ug  u
|||||||   |||  |||   |||||||   |||    |||||   ||||||| ||| |||| ||||| |  ||||||  ||  c
cccaacc   cgg  ucc   ccuucuc   ucu    cuccg   cucccAC CUC GGUC GACCU G  UGGAcg  ac  c
       --c   --   -uu       ---   ----     --u       A   -    G     C --      --  cc 


mirna_id: hsa-mir-3689b
hairpin:
    cu ug uc  ug      --cu    cu ug     ug    g  UG        G    UG     ug  a 
gauc  g  c  cc  gggggu    gauc  g  cuucc  ggag UG  AUAUCAUG UUCC  GGAgg  ug u
||||  |  |  ||  ||||||    ||||  |  |||||  |||| ||  |||||||| ||||  |||||  ||  
cuag  u  g  gg  cccucg    cuag  u  ggagg  ccuU GU  UAUAGUGU GAGG  Ccuuc  gc c
    -- gu ga  gu      ugcc    -- gu     gu    G  GU        G    GU     gu  c 


mirna_id: hsa-mir-3908
hairpin:
     A  A  GU   U     --             ---u         --   -aa   -    u 
gccuG GC AU  AGG AGACU  GUUUcuaaaaaaa    aaaaaguua  aaa   auu uaug u
||||| || ||  ||| |||||  |||||||||||||    |||||||||  |||   ||| ||||  
cggac cg ug  ucc ucuga  cagagguuuuuuu    uuuuuuaau  uuu   uaa gugc a
     -  c  uc   c     ga             uuuu         ca   gug   u    a 


mirna_id: hsa-mir-3909
hairpin:
   aug   u    c    -  -    c     -a        cg         gaaaagc 
ggu   cug ugcg uguc cu uccu ugggg  gcaggcuc  ggggacagg       a
|||   ||| |||| |||| || |||| |||||  ||||||||  |||||||||       c
cca   gac acgu acag ga aggg acUCU  CGUCCGGG  CUCCUGUuc       a
   --g   c    -    u  g    u     GA        AU         aaggaac 


mirna_id: hsa-mir-3910-1
hairpin:
      cu          ---c                              auca 
cuuuug  gucaguuuuu    uguugcuugucuugguuuuaugccuuuuau    a
||||||  ||||||||||    ||||||||||||||||||||||||||||||     
gaagac  uaguuaggaa    acaacgaACAGAACCAAAAUACGGAAAaua    g
      ac          aaaa                              cacg 


mirna_id: hsa-mir-3911
hairpin:
     a    g  U U     CUG      -    ag   ac    -agcuu    g 
gggug ggau UG G GGAUC   GAGGAG GCAg  aag  agug      gcca u
||||| |||| || | |||||   |||||| ||||  |||  ||||      ||||  
cccac ucua ac c cuuag   cucuuc cguc  uuc  ucac      uggu u
     g    g  - -     ---      g    cu   cu    aaccuu    c 


mirna_id: hsa-mir-3912
hairpin:
        auga                              g      u   g 
agagagga    acaguuaaauuauaacauguccauauuaug guuagu gug a
||||||||    |||||||||||||||||||||||||||||| |||||| |||  
ucuuuccu    ugucaauuuaauauUGUACAGGUAUAAUAC CAAUca uac c
        ----                              G      -   a 


mirna_id: hsa-mir-3913-1
hairpin:
u                                                a 
 uguuuauaauaaacugaaauaUUUGGGACUGAUCUUGAUGUCUgccaa a
 ||||||||||||||||||||||||||||||||||||||||||||||||  
 acagauauuauuugacuuuauAAACCCUGACUAGAACUACAGAcgguu c
g                                                c 


mirna_id: hsa-mir-3913-2
hairpin:
u  c                                            g 
 gu uauaauaaacugaaauaUUUGGGACUGAUCUUGAUGUCUgccaa g
 || ||||||||||||||||||||||||||||||||||||||||||||  
 ca auauuauuugacuuuauAAACCCUGACUAGAACUACAGAcgguu u
a  a                                            u 


mirna_id: hsa-mir-3914-1
hairpin:
    c   ag                              au    au 
ugga uuc  auuuaacuucucauuuucugguuccuucua  gagu  g
|||| |||  ||||||||||||||||||||||||||||||  ||||  c
aucu aag  ugaguUGAAGAGUAAAAGACCAAGGAAgau  uuca  u
    c   ga                              gg    au 


mirna_id: hsa-mir-3915
hairpin:
-c   u      ug                A             c  a 
  aag uggcac  uagaauaUUGAGGAAA GAUGGUCUUAUUg aa g
  ||| ||||||  |||||||||||||||| ||||||||||||| ||  
  uuc acugug  gucuuauaacuccuuu cuaccagaauaac uu a
gu   u      gu                c             u  u 


mirna_id: hsa-mir-3914-2
hairpin:
  g   cuacuc                          cca   ua 
ga uuc      aacuucucauuuucugguuccuucua   agu  a
|| |||      ||||||||||||||||||||||||||   |||  g
cu aag      uUGAAGAGUAAAAGACCAAGGAAgau   uca  c
  g   ucuaaa                          uac   ua 


mirna_id: hsa-mir-3916
hairpin:
        gaagaa      A     A  A   ---G    UU     gu a 
aucccaga      ggaagA GAGGA GA AUG    CUGG  CUCAG  g a
||||||||      |||||| ||||| || |||    ||||  |||||  |  
uagggucu      ucuuuu cuccu cu ugu    gacu  ggguc  u u
        ------      -     -  g   aggg    -u     ug g 


mirna_id: hsa-mir-3917
hairpin:
 g       -g  c  g    g   ug  gg       ag  u    a 
g cgcuuuu  ug gc cccg guc  uu  ugcucag  ug gguc g
| |||||||  || || |||| |||  ||  |||||||  || ||||  
c gcggagg  gc cg gggc uGG  GG  ACGAGUC  GC UCGg g
 g       ag  u  -    g   GU  --       AG  -    c 


mirna_id: hsa-mir-3918
hairpin:
   c     --a    u  gA     -  G   A        g  caa 
agg gguua   gcca gg  CAGGG CC CAG UGGAGACU cu   g
||| |||||   |||| ||  ||||| || ||| |||||||| ||   g
ucc ccgau   uggu cc  guccc gg guc accucugg ga   u
   -     gcu    -  ac     a  -   g        g  aac 


mirna_id: hsa-mir-3919
hairpin:
                                 a   - uu gu 
ccugagcaccauuuacugaguccuuuguucucu cua g  u  a
||||||||||||||||||||||||||||||||| ||| |  |   
ggacucgugguaaaUGACUCAGGAAACAAGAGA Gau c  g  g
                                 C   g uu au 


mirna_id: hsa-mir-3150b
hairpin:
     a                 G       C    -    g 
gaggg aagcaggcCAACCUCGA GAUCUCC CAGC cuug c
||||| ||||||||||||||||| ||||||| |||| |||| g
cuccc uucguccGGUUGGAGCU CUAGAGG GUcg ggac u
     c                 G       A    u    u 


mirna_id: hsa-mir-3920
hairpin:
            a               g           gu 
acugagugaggg gucagagaguuaaga aauuaguacag  g
|||||||||||| ||||||||||||||| |||||||||||   
ugacucacuccc cAGUCUCUCAAUUCU UUAGUCAuguu  a
            c               A           ag 


mirna_id: hsa-mir-3921
hairpin:
                              a         aa 
ccuagcccaguacaaggcauaugguacuca gagacuuag  a
|||||||||||||||||||||||||||||| |||||||||   
ggaucgggucaUGUUCCGUAUACCAUGAGU CUCUgaauc  u
                              -         cc 


mirna_id: hsa-mir-3922
hairpin:
                                 CAgg   g 
ggaagagucaagUCAAGGCCAGAGGUCCCACAG    gcu g
|||||||||||||||||||||||||||||||||    |||  
cUUUCUCAGUUCAGUUCCGGUCUucaggguguc    cga a
                                 caca   a 


mirna_id: hsa-mir-3923
hairpin:
                               ---       a 
gguagagugagcucuaauccaauauuacuag   cuucuuu u
|||||||||||||||||||||||||||||||   |||||||  
ucaucucacucGGGAUUAGGUUGUAAUGAUC   ggagaag a
                               AAa       a 


mirna_id: hsa-mir-3910-2
hairpin:
u                                     gc 
 uuuuuuguugcuugucuugguuuuaugccuuuuaugu  c
 |||||||||||||||||||||||||||||||||||||   
 aaaagacaacgaACAGAACCAAAAUACGGAAAauaua  u
a                                     gu 


mirna_id: hsa-mir-3924
hairpin:
    ug               a       g    a   c 
uaaa  aaaaaguaguaguca auaugca aucu ugu a
||||  ||||||||||||||| ||||||| |||| ||| u
auuu  uuuuUCAUCGUCAGU UAUAUGU UAga aua a
    gu               G       A    c   u 


mirna_id: hsa-mir-3925
hairpin:
                        G     C   uca 
gugggaauagcAAGAGAACUGAAA UGGAG CUg   c
|||||||||||||||||||||||| ||||| |||   a
caccuuuaucGUUCUCUUGAUUUU ACCUC gac   u
                        G     A   cuc 


mirna_id: hsa-mir-3926-1
hairpin:
                                uuu 
aaaauggagcUGGCCAAAAAGCAGGCAGAGAc   a
||||||||||||||||||||||||||||||||   a
uuuugccucgaccgguuuuucguccgucucug   a
                                cga 


mirna_id: hsa-mir-3927
hairpin:
u              C           U  u   a 
 gccaauGCCUAUCA AUAUCUGCCUG cc aug c
 |||||||||||||| ||||||||||| || ||| a
 cgguUACGGAUAGU UAUAGAUGGAC gg uac a
a              U           -  -   a 


mirna_id: hsa-mir-676
hairpin:
   ug    UU      C     UU   gaauu 
gca  acUC  CAACCU AGGAC  GCA     a
|||  ||||  |||||| |||||  |||      
cgu  UGAG  GUUGGA UCCUG  Cgu     a
   gU    UU      A     -U   aaggu 


mirna_id: hsa-mir-3926-2
hairpin:
                           gcu 
ggagcUGGCCAAAAAGCAGGCAGAGAc   u
|||||||||||||||||||||||||||   u
ccucgaccgguuuuucguccgucucug   u
                           aaa 


mirna_id: hsa-mir-3928
hairpin:
                   gc    ggg 
gcugaagcucuaagguucc  cugc   c
|||||||||||||||||||  ||||   a
CGGCUUCGAGGUUCCAAGG  GGcg   g
                   -A    aag 


mirna_id: hsa-mir-3929
hairpin:
     ----      c    aa      c 
agugg    cucaca cagu  ucccag a
|||||    |||||| ||||  ||||||  
UCACC    GAGUGU GUCG  AGgguu c
     AGAU      A    -G      u 


mirna_id: smr-mir-282
hairpin:
-gaa      u     uAA   U   C A           uuug 
    ccggca uguau   GCC CUC C GGCUUAGUCUg    u
    |||||| |||||   ||| ||| | |||||||||||    u
    gguugu acaua   cgg gag g cugagucaggu    u
uuua      u     caa   u   a c           uaau 


mirna_id: smr-mir-965
hairpin:
aac    --   ug     a              ag   -   au   u  gu 
   uggu  ggu  ccuag gggagaagcuguac  gcu aug  ucg ac  a
   ||||  |||  ||||| ||||||||||||||  ||| |||  ||| ||  u
   acca  uca  ggaUC CCCUUUUCGGUAUG  CGA Uac  agc ug  c
uca    aa   ga     -              --   A   --   -  aa 


mirna_id: smr-mir-3930
hairpin:
uaa       u  uucA  GU              G  ---g  a 
   ucgccuu gc    CG  UCUGUUACGGUGUA Ag    ga u
   ||||||| ||    ||  |||||||||||||| ||    || u
   agcggga cg    GC  AGACGAUGCCGCAU uc    cu a
aug       c  caUC  UG              G  aaaa  c 


mirna_id: isc-mir-276
hairpin:
aggggaa    - -     c       g    c    g     -   uga  g 
       gucg c gcuau gcgagcg ggua ggag ucuua cug   gc u
       |||| | ||||| ||||||| |||| |||| ||||| |||   || c
       cagc g cggua cgCUCGU CCAU CUUC AGGAU gac   cg a
---ugca    a a     u       A    A    A     c   ---  a 


mirna_id: isc-mir-305
hairpin:
-ca      a    A          UC      U    -a  u    
   gucacu guua UUGUACUUCA  AGGUGC CUgg  gu cgg 
   |||||| |||| ||||||||||  |||||| ||||  || || u
   cgguga uagu aacgugaggu  ucuacg gacc  ca gcu 
gca      a    a          uu      -    aa  c    


mirna_id: isc-mir-iab-4
hairpin:
------g    -g   c c        -           U    -  U   ugu 
       auuc  cgg g cucccguU CGUAUACUGAG GUAU CC GAg   u
       ||||  ||| | |||||||| ||||||||||| |||| || |||   u
       uaag  gcc c gggggcaa gcauaugacuu caua gg cuu   a
aggcgcg    ag   - a        u           c    u  c   uua 


mirna_id: dpu-mir-279b
hairpin:
aucuug  c     u  gu   -     -uc         ug    uuaaa 
      ag auacg ca  cgg cgagu   gguuuuagu  uauu     u
      || ||||| ||  ||| |||||   |||||||||  ||||      
      uc uaugu gu  GCC GCUCA   CCAAGAUCA  augg     u
-cuuua  u     c  uG   U     CAC         GU    cugau 


mirna_id: dpu-mir-305
hairpin:
-------agua     g     u   U       UAU    U      uuugaa 
           gagaa ugacc gcU UGUACUU   CAGG GCUCUg      a
           ||||| ||||| ||| |||||||   |||| ||||||       
           cucuu guugg cga acaugaa   gucc cgggac      u
agccgcuccua     -     u   u       cgu    c      uccauu 


mirna_id: hvu-MIR156
hairpin:
U      -    A        A         g  a     gauaa       -   a            a 
 GACAGA AGAG GUGAGCAC cagcggcag cu cgucu     gagcaug guu auaguauagcca c
 |||||| |||| |||||||| ||||||||| || |||||     ||||||| ||| |||||||||||| u
 cugucu ucuc cacucgug guugucguc ga gcaga     uucgugc cga uaucauaucggu g
u      c    c        c         -  c     -----       a   g            c 


mirna_id: tae-MIR156
hairpin:
uccucucucucucucucucu   u     ccgucu      -uc        u    c     --c  c      -        -       c     g        -    A        A         a  a      guaaagagga  gau 
                    gcg gucga      gcugug   cgauggga cggu ggggg   ug ggugga ggguugau gauggug gaaug cUGACAGA AGAG GUGAGCAC cagcggcag cu cgucug          cg   g
                    ||| |||||      ||||||   |||||||| |||| |||||   || |||||| |||||||| ||||||| ||||| |||||||| |||| |||||||| ||||||||| || ||||||          ||    
                    cgu cagcu      cgacgc   gcuacccu gccg ucccc   ac cuaccu ucuaacua cuaccgc cuugc gacugucu ucuc cacucgug guugucguc ga gcagau          gc   g
-------------------c   -     ------      uuc        u    u     ucu  -      a        a       -     -        c    c        c         -  c      auagagagaa  gua 


mirna_id: hvu-MIR159b
hairpin:
cuga   c  U       G     A    UG  ucu   ucuauuacuaauuaguuuccucuu 
    ccg ug UUGGAUU AAGGG GCUC  ca   uga                        c
    ||| || ||||||| ||||| ||||  ||   |||                         
    ggu ac gaucuag uucuc cggg  gu   acu                        c
----   -  c       a     c    gu  -uu   aaagguccgaacguacgucgucuu 


mirna_id: hvu-MIR159a
hairpin:
g ug        a   u     uga  -    uac  ga    u   -u  a   g    u     guuc    uau         auuag 
 g  gagcuccu uca uccaa   ag gguc   cg  aggg uug  gc gcu cuug ucaug    ccac   ccuaucucc     a
 |  |||||||| ||| |||||   || ||||   ||  |||| |||  || ||| |||| |||||    ||||   |||||||||      
 c  CUCGAGGG AGU AGGUU   uc ccag   gc  uccc agc  cg cga gagc aguac    ggug   ggauagagg     a
a GU        A   U     -Ug  g    -uc  --    u   uu  c   g    u     guuu    uuc         agcac 


mirna_id: tae-MIR319
hairpin:
-aguu           a          cu     g   u  cg    uu      g  g   a  -     a    ag a       g    gagacuaguccaggg 
     ugagggagcuc cuucagucca  caugg agg ag  ggga  gaacga cu ccg cu cauuc cucg  c cacagua auau               c
     ||||||||||| ||||||||||  ||||| ||| ||  ||||  |||||| || ||| || ||||| ||||  | ||||||| ||||                
     acUCCCUCGAG GAAGUCAGGU  guacc ucc uc  uucu  cuuguu ga ggc ga guaag gagu  g gugucau uaua               a
ucucu           G          Uc     -   -  cu    cu      a  g   -  c     c    aa c       g    acauuguaugaccau 


mirna_id: ttu-MIR160
hairpin:
auau       C   C   C         cu    -   a   ac     uu 
    gaugUGC UGG UCC UGUAUGCCA  cauc cag gca  accuu  g
    ||||||| ||| ||| |||||||||  |||| ||| |||  |||||  c
    cuauacg acc agg acgugcggu  guag guc cgu  uggaa  a
---g       a   u   c         ag    c   -   --     ua 


mirna_id: hvu-MIR166a
hairpin:
c    uu    a         cn  g     naaaga     ncuc    g   u 
 augg  gucg ggggaauga  cc ggucc      gagac    gcau gcg g
 ||||  |||| |||||||||  || |||||      |||||    |||| |||  
 uacc  cagu CCCCUUACU  GG CCAGG      CUuug    cgug ugc c
-    -u    a         UC  A     ------     ----    g   g 


mirna_id: tae-MIR167b
hairpin:
cu   caa     c      A    --A    ---------A     UAuc 
  gcc   gggaa gagUGA GCUG   CAGC          UGAUC    u
  |||   ||||| |||||| ||||   ||||          |||||    c
  cgg   cccuu uucacu cgac   gucg          acuag    c
-g   ---     c      c    ggc    caaagaacaa     ugag 


mirna_id: hvu-MIR168
hairpin:
guc   c  c    c   g gc             AU     Ccc    -    cc 
   cgu gc gccg cuc g  UCGCUUGGUGCAG  CGGGA   uccg cccg  c
   ||| || |||| ||| |  |||||||||||||  |||||   |||| ||||   
   gcg cg cggc gag c  AGUGAACCACGUU  GCCCU   AGgc gggc  c
---   a  -    c   g UA             CC     ---    c    ag 


mirna_id: ata-MIR169
hairpin:
gagugguau       ua     u     u  gg g    ---           AG     A     --A   -    g 
         caucuuu  gcucu gcaug gg  a gagg   acaugUAGCCA  GAUGA UUGCC   Gcg cgga u
         |||||||  ||||| ||||| ||  | ||||   |||||||||||  ||||| |||||   ||| ||||  
         guagaag  cgagg cguac cc  u cucc   ugugcaucggu  uuacu aacgg   cgc gccu g
--------u       --     u     u  uu g    guu           ca     g     acg   u    a 


mirna_id: hvu-MIR169
hairpin:
u   a           --     ----AAGG      UG    a 
 aac cgccagaaaua  AAGCC        AUGAGU  CCUG u
 ||| |||||||||||  |||||        ||||||  |||| c
 uug gugguuuuugu  uucgg        uacuca  ggac a
u   a           cu     gauggagg      --    u 


mirna_id: tae-MIR1433
hairpin:
-     ----        ccau     -a     a   a             a    c  uu   a   ga          
 ugggg    guaagagg    cuucg  uagcc agg ugauuugccugug aacu cc  ggc gcc  gcucucugc 
 |||||    ||||||||    |||||  ||||| ||| ||||||||||||| |||| ||  ||| |||  |||||||| c
 acccc    cauucucc    gaagc  AUCGG UCC ACUGAACGGGuac uugg gg  cug cgg  cgagagaca 
u     acac        --au     CC     G   C             c    c  -c   -   --          


mirna_id: hvu-MIR171
hairpin:
gcggguugauggccaggaacucc      a   g  u  -     c  u     u         U  A    C     -  -a     g   ga 
                       gacaag gga ga gc ugaaa gg cacua gaUGUUGGC CG CUCA UCAGA cc  cgccg agg  g
                       |||||| ||| || || ||||| || ||||| ||||||||| || |||| ||||| ||  ||||| |||   
                       cuguuc ccu cu cg acuuu uc gugau CUAUAACCG GC GAGU AGUcu gg  gcggc ucu  c
-----------cacccacuaccg      -   g  -  u     c  -     u         U  C    U     u  cg     g   ac 


mirna_id: ata-MIR172
hairpin:
u  uu    ug  ga     aa   uu      u  ugaugguugau            c a  ---- ug               a      --------------  -        cccuc     cu    cucucu    cucucuc   cu 
 uc  ucag  au  uagcg  ggg  gauaua gu           gguggguguuug g gc    g  guaucaucaagauuc caucca              uc augcaucu     ucucu  cucu      cucu       ucu  c
 ||  ||||  ||  |||||  |||  |||||| ||           |||||||||||| | ||    |  ||||||||||||||| ||||||              || ||||||||     |||||  ||||      ||||       |||   
 ag  aguc  ua  gucgc  ccc  uuauau ca           cuacccgcgaac c cg    C  CGUAGUAGUUCUAAG GUaggu              ag uacguaga     agagg  gagg      gggg       gga  u
u  uu    gu  --     --   --      -  -----------            a a  ccUA GU               A      uucauacaauagau  a        uauac     uc    uauauc    uauaucu   uc 


mirna_id: tae-MIR395a
hairpin:
cuua   u         g            - a      au 
    cag ggguuccuu caagcacuucau g ggcauu  u
    ||| ||||||||| |||||||||||| | ||||||   
    guu CUCAAGGGG GUUUGUGAAGUG c ccguaa  a
----   -         -            u a      aa 


mirna_id: tae-MIR395b
hairpin:
cU          -         u     uc              aga      cca   a  au 
  GAAGUGUUUG GGGGAACUC uggug  accaagcauuuagu   cauugg   cau uc  a
  |||||||||| ||||||||| |||||  ||||||||||||||   ||||||   ||| ||   
  cuucacgaac uuccuuggg accau  ugguuuguaagucg   guaacu   gua ag  a
--          g         u     uc              --g      -ac   g  ag 


mirna_id: hvu-MIR397
hairpin:
----c         C     A           A       -       a   cccguc 
     gcagaggug CGUUG GUGCAGCGUUG UGaaccg uccggcc ugg      c
     ||||||||| ||||| ||||||||||| ||||||| ||||||| |||       
     cgucuccgc guaac cacgucgcggc acuuggc aggccgg gcc      g
ucuuu         a     g           c       g       a   accucc 


mirna_id: tae-MIR398
hairpin:
agac       aa    u      u   a              ---    c  ac     ga 
    gcgagga  uucc gcgggg cga cugggaacacaugg   gaua ga  cgcuu  u
    |||||||  |||| |||||| ||| ||||||||||||||   |||| ||  |||||  u
    cgcuccu  gagg cGCCCC GCU GACUCUUGUGUacu   cuau cu  gcgag  g
----       cc    u      C   G              caa    u  ca     ga 


mirna_id: tae-MIR444b
hairpin:
ga           c    c     a       a         u             g        -  -a a   -----   u 
  uaugcaugugg ggca cgagc ugaggca caacugcau acuugcggggaag cgcaagua gg  c ccu     gca u
  ||||||||||| |||| ||||| ||||||| ||||||||| ||||||||||||| |||||||| ||  | |||     ||| a
  auauguacacc cCGU GUUCG ACUCCGU GUUgacgug ugaacguucuuuc guguucau cc  g gga     cgu c
--           u    C     A       C         c             g        a  ac c   acaaa   u 


mirna_id: tae-MIR171b
hairpin:
ugaguuaaucc     ----g     ugaa    --       ug          ag  a cu  c     agg 
           ugcga     gggag    cgcg  guauugg  cgguucaauc  ag g  gg gcccc   a
           |||||     |||||    ||||  |||||||  ||||||||||  || |  || |||||   g
           acgcu     cucuu    gcGC  UAUAACC  GCCGAGUUag  uc c  cc ugggg   g
----uccuccu     aagua     --ug    AC       GU          cu  - cu  u     aac 


mirna_id: gma-MIR4340
hairpin:
--ac          -      g     ugaagu 
    aagcguguuc ugucuu gcagc      u
    |||||||||| |||||| |||||       
    UUCGCGCAGG AUAGAG CGUcg      c
aucA          G      A     uuaagc 


mirna_id: gma-MIR4341
hairpin:
    -      g                   c      gguguaaccacaccuuccc 
accc ucaugu aaacuuucaacauauuucu uauuua                   u
|||| |||||| ||||||||||||||||||| ||||||                   c
ugGG AGUACA UUUGAAAGUUGUGUagaga auagau                   a
    C      A                   a      auauucuuagauaacucac 


mirna_id: gma-MIR4342
hairpin:
ucuuu      -             a   g  u 
     ucacca cuuacauucuaag cga uu g
     |||||| ||||||||||||| ||| ||  
     ggUGGU GGAUGUAAGAUUC GCU Ag u
uuuac      A             A   A  u 


mirna_id: gma-MIR4343a
hairpin:
   c        c       AA                        a 
auc guauuguu uguAAAA  CUUACGGAUCAAGUUGAUuuguaa a
||| |||||||| |||||||  |||||||||||||||||||||||| g
uag cauaacaa acauuuu  gaaugccuaguucaacuaagcauu g
   c        a       cc                        c 


mirna_id: gma-MIR4344
hairpin:
uu     a        c   a                 GA    C       U    ga 
  aagac gugcuuac uca caacgucuuugaAAGUA  CAUU UAAGACG UGCU  u
  ||||| |||||||| ||| |||||||||||||||||  |||| ||||||| ||||   
  uuuug cacgaaug agu guugcagaaacuuucau  guaa auucugc acga  a
-u     c        u   c                 gc    a       c    au 


mirna_id: gma-MIR4345
hairpin:
g    c              C              -          a 
 gaag UAAGACGGAACUUA AAAGAUUguucagg uagacauuug g
 |||| |||||||||||||| |||||||||||||| ||||||||||  
 uuuc auucugcuuugaau uuucuaacaaguuc gucuguaaau a
-    a              u              u          a 


mirna_id: gma-MIR4364b
hairpin:
u           C                      c   - u       g a 
 gaaaaUAACAA AGCGGAAGAACCUUCUUccgug gau c cacagaa a u
 ||||||||||| |||||||||||||||||||||| ||| | ||||||| |  
 cuuuuauuguu ucgccuucuuggaagaaggcac cua g gugucuu u c
-           a                      -   a c       g u 


mirna_id: gma-MIR4346
hairpin:
----                C               A         a        -   a 
    ugggaauggaGAAAGA CAAACGAGAAGCUGC Uaacagcgu uugauuua cau a
    |||||||||||||||| ||||||||||||||| ||||||||| |||||||| ||| g
    acccuuaccucuuucu guuugcucuucgacg auugucgcg aacuaagu gua u
uggu                u               c         g        c   a 


mirna_id: gma-MIR4347
hairpin:
u      a           C              c  a        uu  c      c              
 ugguuc cAAGCUUCUUA GGAUCAAGUUGAUc gu agcuucuu  gc gaucaa uugauucguaaga 
 |||||| ||||||||||| |||||||||||||| || ||||||||  || |||||| |||||||||||| a
 acuaag guucgaagaau cuuaguucaacuag cg ucgaagag  ug cuaguu aacuaggcguucg 
a      c           a              a  a        --  c      u              


mirna_id: gma-MIR4348
hairpin:
-                             a           a      aa  g  c  c        aucaa 
 auguguuAAACUUGUAAGAUGGUGACAUU ugaugguuaug auguaa  au ac uu uauauugg     g
 ||||||||||||||||||||||||||||| ||||||||||| ||||||  || || || ||||||||      
 uacauaguuugaacguucuacuacuguaa acuaucaauac uacauu  ua ug aa auguaacc     u
a                             c           c      --  g  a  a        aacau 


mirna_id: gma-MIR4349
hairpin:
                           A A    u   a                           --g    ag uuu 
ccaagucccaUAUUGGCUAGAGAUAAG C AAGA aga uauauaaguggggcgcaauccucaccc   agcu  g   u
||||||||||||||||||||||||||| | |||| ||| |||||||||||||||||||||||||||   ||||  |    
gguucaggguguaaccgauuucuauuc g uucu ucu auauauucacuccgcguugggaguggg   uuga  u   g
                           c g    u   c                           aua    gu ggg 


mirna_id: gma-MIR4350
hairpin:
                U                   a                  c            c   --     u 
ucaaaauUCAAAUGAU UUGUGUCGUUGGuucauca uucaaaauuuucaauaug cauuuucacaaa ucu  gguaa c
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||| |||  |||||  
aguuuuaaguuuauua aacacggcaaucaaguagu aaguuuuaaaaguuauac guaaaaguguuu aga  ccauu g
                c                   c                  a            a   aa     a 


mirna_id: gma-MIR4351
hairpin:
u                c        G                         uucaacugaauugggauucaguugaaccu 
 ugggauuugggacuaa ugaAUUGG AUUCAGUUGGAGUUGGuuacagaag                             u
 |||||||||||||||| |||||||| |||||||||||||||||||||||||                             u
 acccuaaacccugauu acuuaacc uaagucaaucucaaccaaugucuuc                             u
a                a        a                         uucuugagucuugucucuuaauguugacu 


mirna_id: gma-MIR4352a
hairpin:
                a     a   c         cg a         a  a      uucaac    a 
agaaccgucguaguau ucuua aaa uaaggcggu  u ugaauagcc uc uagaau      agca a
|||||||||||||||| ||||| ||| |||||||||  | ||||||||| || ||||||      ||||  
ucuUGGCAGCAUCAUA AGGAU UUU auucugcca  a gcuuauugg ag aucuua      ucgu a
                C     C   A         au a         c  a      ------    a 


mirna_id: gma-MIR4353
hairpin:
C      U   C       UU         
 AAGUCG AGC GGUGUUA  ACUucuga 
 |||||| ||| |||||||  ||||||| g
 uucagc uug ccacaau  ugaagacu 
a      u   u       cc         


mirna_id: gma-MIR1520e
hairpin:
ua       cg a         g                   a      a    a     ucaaugaaaacagcaaugcau 
  acuguca  u ucacguucu auuggaugaugacugucac ugucau uucu auugg                     u
  |||||||  | ||||||||| ||||||||||||||||||| |||||| |||| |||||                      
  uGACAGU  A AGUGCAAGA UAACcuacugcugacagug acagua aaga uaacc                     u
ac       AU C         A                   c      c    c     uacaguugagguacuuucuac 


mirna_id: gma-MIR1520f
hairpin:
uucuuacuaaaugac        c                acaugaaa       ugca 
               gauuguca gugucauguucugauu        gaugaaa    u
               |||||||| ||||||||||||||||        |||||||    u
               cuAACAGU CACAGUACAAGACUAA        uuacuuu    g
--------------a        A                ----Ccag       uauu 


mirna_id: gma-MIR1520g
hairpin:
       c                  a     a  uugaauccauggaagaua 
augauga ugucacgugucauguucu auuga uc                  a
||||||| |||||||||||||||||| ||||| ||                  a
uacuacu ACAGUGCACAGUACAAGA UAACu ag                  a
       A                  C     -  uuacuauuguuauuacau 


mirna_id: gma-MIR4354
hairpin:
       a   a     c      c      c          - c      guuugaccaagucaucucgagucu 
uuggucg guu gaccg uccaau gggauc ggugaccuaa c ggucga                        a
||||||| ||| ||||| |||||| |||||| |||||||||| | ||||||                         
agcCGGC CAA CUGGC AGGUUA Cccuag ccacuggauu g cuagcu                        u
       -   C     U      A      a          a u      aauaugauaaucuagccagugcau 


mirna_id: gma-MIR4355
hairpin:
----                    u           a     a    - ca           -caa    -a         ag 
    cugguacacccagcauaaca guguaauucca uuuug ccuu c  uaaagcugaua    auug  uaauccgua  c
    |||||||||||||||||||| ||||||||||| ||||| |||| |  |||||||||||    ||||  |||||||||  u
    gACCAUGUGGGUCGUGUUGU CACguuaaggu aaaac ggaa g  auuucgacuau    uaac  guuaggcau  c
uaac                    -           g     -    a ac           uacc    cg         aa 


mirna_id: gma-MIR4356
hairpin:
         a   aa   caa     a        g   a 
caccgucuu gaa  ccu   cuuuc aagacagu cug c
||||||||| |||  |||   ||||| |||||||| |||  
gugguagaa cuu  GGA   GAAAG UUCUGUCA GAC g
         a   -C   -CC     A        G   u 


mirna_id: gma-MIR4357
hairpin:
-a  u          aa         ccucaauuauucucaaaauaauuuuaagucaucgcaccucaaagugauugaacucgucgggu 
  au aacuguacaa  cacaugacu                                                              u
  || ||||||||||  |||||||||                                                               
  UA UUGGCAUGUU  GUGUGCUGA                                                              u
ga  C          -A         Cauuuugggaaauuccugcugcuuaaucacacgcugcucauaacacuacccuagguggcacc 


mirna_id: gma-MIR4358
hairpin:
u               aa        c     c   gauuucgccaauuugacuggcgauuuagguugcgucagaaaguaau 
 uuugucacuuaugcu  ugauauag caugc cug                                              u
 |||||||||||||||  |||||||| ||||| |||                                               
 aagcggugaguacGA  GCUAUAUC GUACG GAC                                              a
a               CC        A     U   uuaaaacgaucaaacugaccgcuaaagcgguuaaacugaucguuac 


mirna_id: gma-MIR4359a
hairpin:
             a        a           G     C             c 
uaacaucgguuuu ugaaaauc auguuAACGAA UGACU UAACAUCGGUUuu a
||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||  
auuguagccaaaa acuuuuag uacaauugcuu gcuga auuguagcuaaaa a
             g        c           a     u             g 


mirna_id: gma-MIR4360
hairpin:
     C                            g   g 
aaaaa AGUUGACGUACGUACGGAUUGACaaucc uau g
||||| |||||||||||||||||||||||||||| |||  
uuuuu ucaacugcaugcaugccuaacuguuagg aua c
     u                            a   c 


mirna_id: gma-MIR4359b
hairpin:
       C    G                   c 
auguuAA GCGU AUAUGUUAACAUCGGUuuu c
||||||| |||| |||||||||||||||||||  
uacaauu cgua ugugcaauuguagcuaaaa a
       a    -                   a 


mirna_id: gma-MIR4387c
hairpin:
      a           c  u                     cuugugguggacauaucaucac 
cauuaa ugaugauguga ag uggagugucacgucaucacgc                      c
|||||| ||||||||||| || |||||||||||||||||||||                       
guaauu acuacugcacu uC GCCUCACAGUGCAGUAGUGCG                      u
      c           a  U                     Aauuagugauugugcaguaauu 


mirna_id: gma-MIR1520h
hairpin:
               a    a        -ucu    -  u  g 
cacgugucacguucu auug acguugau    auag ac au a
||||||||||||||| |||| ||||||||    |||| || ||  
guGUACAGUGCAAGA UAAC UGCAAcug    uguu ug ua a
               C    C        uugu    a  -  a 


mirna_id: gma-MIR4361
hairpin:
c           g         a      a 
 aaguugauccg aagucucuu cggauc a
 ||||||||||| ||||||||| |||||| g
 uUCAACUAGGC UUCAGAGAA GCCuag u
a           A         G      u 


mirna_id: gma-MIR1520i
hairpin:
ua        ua              cuuauuggauuaugacugucacgugucauguucugauuggucaau 
  auguugac  ucacgugucacguu                                             g
  ||||||||  ||||||||||||||                                              
  UACAACUG  AGUGCACAGUGCAA                                             a
ac        GC              aacuaacuuacaguugagguauuuucuaauuuacauaacaauaaa 


mirna_id: gma-MIR4362
hairpin:
        u   c             c            C    U          u   c  ca         ccugaacauuuugguucaugaaugu 
aacuuuua aaa caguguuuuuagu CCUUAGGACAGA GUCA GUAGgaaaca ugu aa  guguuuguc                         u
|||||||| ||| ||||||||||||| |||||||||||| |||| |||||||||| ||| ||  |||||||||                          
uugaaaau uuu guuacgaaaauca ggaguccuguuu cggu cauccuuugu aca uu  uacagacag                         u
        u   a             a            a    u          u   a  ag         aacucccggauuuuugggaacgaaa 


mirna_id: gma-MIR4363
hairpin:
     gg      --                cauccag              -ca  aa 
gccua  auaggc  ucugguaaucgauuac       uguaaucgauuaca   ug  c
|||||  ||||||  ||||||||||||||||       ||||||||||||||   ||   
cgGAU  UAUUCG  AGACCAUUAGCuaaug       acauuagcuaaugu   ac  a
     --      GA                uccuaca              ccg  gg 


mirna_id: gma-MIR4364a
hairpin:
   u                      c                -      cca    
aac gcggaagaaccuucuuccgugc aucuugcggaagaacu ucuucc   gga 
||| |||||||||||||||||||||| |||||||||||||||| ||||||   || a
uug cgccuucUUGGAAGAAGGCACG UAGAGCGCcuucuugg agaagg   ccg 
   u                      C                u      -ca    


mirna_id: gma-MIR4380a
hairpin:
             a               a gu    c                  agcaauccguaugggucaua 
guaugcacauacg auuagcaaucuguau g  caug ggauugucaaucuguaug                    c
||||||||||||| ||||||||||||||| |  |||| ||||||||||||||||||                     
caUACGUGUAUGC UAGUUGUUAGGCaug c  guau ccuaacgguuaggcauac                    g
             C               - ug    a                  cuaguaugucuagucguuag 


mirna_id: gma-MIR396d
hairpin:
-g      c                   a     uau  aucuuauaucucuc 
  gucaug uuuuccacagcuuucuuga cuucu   gc              c
  |||||| ||||||||||||||||||| |||||   ||              a
  CGGUAU AGAGGGUGUCGAAAGAAcu gaaga   cg              c
aa      A                   c     ucc  aauuuuacgaccuu 


mirna_id: gma-MIR1520j
hairpin:
         c     ca                a        u       acc             auaucaacuccaugaaagaug 
gaauguuga uguca  ugucacguucuuauug augaugau gucacgu   auguuaugauugg                     a
||||||||| |||||  |||||||||||||||| |||||||| |||||||   |||||||||||||                      
cuuacAACU ACAGU  ACAGUGCAAGAAuaac uacuacug uagugca   uacaauacuaacc                     a
         A     AC                c        c       caa             aaucacuuuuauuauuacgua 


mirna_id: gma-MIR4365
hairpin:
AAGAACU             C                    a      ua 
       UCUUCCGCGAGAU GCAuggaagaagguucuucc caguug  a
       ||||||||||||| |||||||||||||||||||| ||||||   
       agaaggugcucua cguaccuucuuccaagaagg gucaau  c
------a             c                    c      ua 


mirna_id: gma-MIR4366
hairpin:
                              c      g    a        c                                                       u        --gu  cc      a 
aagagaugugaaaacaccuuagaaguugag uagaua aaaa gaaaggcu uugaaacaagauccaaauuccucaaagcaugcaaaccaaccaacaaaucucuacu aguaggga    cc  uuucaa a
|||||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    ||  ||||||  
uucucuacacuuuuguggaaucuucaacuc aucuau uuuu cuuuccga aacuuuguucuagguuuaagggguuucguacguuugguuGGUUGUUUAGAGAUGA UCAUCccu    gg  gagguu a
                              a      a    c        c                                                       U        aaau  aa      a 


mirna_id: gma-MIR4367
hairpin:
             a     a  cc                 a                       a             c              ------cu     cacu   gg 
caauuuccaucaa acaau cu  ccuaaaaccuagaacaa auaugauauaauugauuuacuuc cuaggguucagga aauauucaaucaug        uggcu    gca  a
||||||||||||| ||||| ||  ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||        |||||    |||   
guuaaagguaguu uguua ga  ggauuuuggaucuuguu uauacuauguuaaCUAAAUGAAG GAUCCCAAGUCcu uuauaaguuaguac        acuga    cgu  c
             c     c  aa                 c                       C             a              acucucuu     ---u   aa 


mirna_id: gma-MIR4368a
hairpin:
       a        A     C        A    u   a u 
ggcauuc AAGACGGU CUUAC UCAGUAAC ucuu gaa g a
||||||| |||||||| ||||| |||||||| |||| ||| |  
ccguaag uuuugcca gaaug agucguug agaa cuu c a
       a        c     u        c    u   a a 


mirna_id: gma-MIR4371c
hairpin:
--         a                   A   CA      c    u           ccaauu     aucac 
  cuguuaagu auGACGUGACAGACGGAAU UCA  Ucauca guuu gucauggacac      gucau     c
  ||||||||| ||||||||||||||||||| |||  |||||| |||| |||||||||||      |||||     a
  ggcaauuua uacugcauuguuuguuuua agu  aguagu caag uagugccugug      cagua     c
aa         c                   c   ac      a    u           ------     acuuc 


mirna_id: gma-MIR4368b
hairpin:
c         A            A                        ---    g   aa   a    caca 
 AAGGACGGU CUUACGUAAGCA Cgucuuugaaaguucacaaacaaa   gacg ugc  gca cguc    a
 ||||||||| |||||||||||| ||||||||||||||||||||||||   |||| |||  ||| ||||     
 uuucugcca gaauguauucgu gcagaaacuuucaaguguuuguuu   cugc acg  cgu gcag    a
u         c            c                        aug    a   aa   g    aaac 


mirna_id: gma-MIR4369
hairpin:
u     u           a         ---gaa  ga u 
 uuucc cuuucggauca cuugauccg      ga  c u
 ||||| ||||||||||| |||||||||      ||  |  
 aaAGG GAAGGCCUAGU GAACUAGGc      cu  g a
a     U           C         auucaa  ag c 


mirna_id: gma-MIR4370
hairpin:
             UC   U     G       g 
cggAGUAGACUCG  CGA UUUGC UAgacuu g
|||||||||||||  ||| ||||| |||||||  
gccucgucugagc  gcu agaug guuugaa a
             --   c     g       c 


mirna_id: gma-MIR4387b
hairpin:
                           gu   gccacaucauucaagguguuggu 
gugacaggcagagugucaugucaucau  cuu                       g
|||||||||||||||||||||||||||  |||                        
cacugucuGUCUCACAGUACGGUAGUG  GAA                       u
                           UG   uaguacuuguaguaaaguaacgg 


mirna_id: gma-MIR4371a
hairpin:
guuAA                  A                cc  uu     auuaucaccuuuaa     u 
     GUGAUGACAUGACAAGCG AGUaucacguuaucac  uc  gucau              ugaca a
     |||||||||||||||||| ||||||||||||||||  ||  |||||              |||||  
     cacuauuguacuguuugu uuauaguguaguagug  ag  uagua              acugu c
-aauc                  c                ca  -u     --------------     g 


mirna_id: gma-MIR4371b
hairpin:
          c         A       C        CG     c              uu     a     c   u     c     cac 
uuguuaguug cuuucguuA GUGAUGA GUGGUAGA  GAGUg cgugucauuaugcc  gucac gacac uca ugcua aucau   c
|||||||||| ||||||||| ||||||| ||||||||  ||||| ||||||||||||||  ||||| ||||| ||| ||||| |||||    
agcaaucaac gaaggcaau cacuacu caccgucu  cucac gugcaguagugugg  uagug uugug agu acggu uagua   g
          a         c       a        au     a              -u     a     c   c     a     auc 


mirna_id: gma-MIR4372a
hairpin:
         a          ua      c    ------        uca     uua   aa 
acguugauc ucauauguca  auuuua ugga      cguuaauu   uguau   auu  c
||||||||| ||||||||||  |||||| ||||      ||||||||   |||||   |||   
uguaACUGG AGUGUACAGU  UAAAAU accu      gcaauuaa   acaua   uaa  g
         C          GC      a    ccaacu        ucc     -uc   cu 


mirna_id: gma-MIR4352b
hairpin:
        c                        a c          c  ca     cu    a     -----         uuua 
gauuuuuu agaaaccgucuuagaauguuuaca u uaagacgauu uu  aagaa  gucu agagu     guuuguuuu    a
|||||||| |||||||||||||||||||||||| | |||||||||| ||  |||||  |||| |||||     |||||||||    a
cuaaaaaa uuuuuGGCAGAAUCUUACAGAUGU A AUuuugcuaa aa  uuuuu  uaga ucuua     uaaauaaaa    a
        c                        A A          a  cc     ag    a     agauu         uuaa 


mirna_id: gma-MIR4373
hairpin:
       U                       uc       u    a    c 
aaaaAAG UGACGUACGUACGGAUUGACaau  guauggu caua ggau a
||||||| |||||||||||||||||||||||  ||||||| |||| |||| g
uuuuuuc acugugugcaugccuaacuguua  cauaccg guau ccua u
       u                       ga       -    g    a 


mirna_id: gma-MIR4374a
hairpin:
-         u              a           gu        u     a   c        acaac     a   agc 
 ucaaagacg uguugacaucacga cgucuuagaaa  caggcuuc aagac gug ugacgucg     gucuu gaa   c
 ||||||||| |||||||||||||| |||||||||||  |||||||| ||||| ||| ||||||||     ||||| |||    
 aguuucugc ACGACUGUAGUGCU GCAGAAUcuuu  guccgaag uucug cac acugcagu     cagaa cuu   a
a         c              G           ug        u     c   a        gccga     a   cca 


mirna_id: gma-MIR4375
hairpin:
U            C  G    G     caac  u 
 ACCACUAGUGGU GC CCUG CAggc    ac a
 |||||||||||| || |||| |||||    || c
 uggugaucacca cg ggac guccg    ug u
u            -  -    g     -cac  a 


mirna_id: gma-MIR4376
hairpin:
           C        G    C    U ---      a ccau    g   c 
aagguuugcUA GCAGGAGA AUGA GCUG c   ccuugc c    ccua cuu c
||||||||||| |||||||| |||| |||| |   |||||| |    |||| ||| c
uuccaaauGAU CGUCCUCU UACU CGAc g   ggaacg g    ggau gag u
           A        A    A    c acc      a -aau    -   u 


mirna_id: gma-MIR4377
hairpin:
uuua         a         a     ---gacgaac              uaaucacu     a   g     cg      a 
    ucuucuguu agugaugac uggca          cacguuauuauguu        gacac uca uauca  ucauug g
    ||||||||| ||||||||| |||||          ||||||||||||||        ||||| ||| |||||  ||||||  
    AGAAGGUAA UCGCUACUG AUcgu          guguaguaguguag        cugug agu auagu  aguaau g
-aGC         G         C     auauauuaca              cacaauac     a   a     au      g 


mirna_id: gma-MIR4374b
hairpin:
                        a             u      u    ga 
ggugcuuaccucagcaacgucuuu aaaguaggcauuc aagacg ugcu  a
|||||||||||||||||||||||| ||||||||||||| |||||| ||||   
ccacgaaugGAGUUGUUGCAGAAA UUUCAUccguaag uucugc acga  g
                        C             u      c    au 


mirna_id: gma-MIR4378a
hairpin:
    -A           G    G            a         aacacaaacucgucuuagaaugucauacauuuuaag 
ucAU  GGACUGUCUUA AAUG UGUAcauucuaa acagucucc                                    a
||||  ||||||||||| |||| |||||||||||| |||||||||                                     
agug  ucuggcagaau uuac acauguaagauu uguuagggg                                    c
    cg           a    a            c         uccuauuuagguagaaucucacauacuguauucggg 


mirna_id: gma-MIR4378b
hairpin:
u                    CUA     c   a    gg  uu 
 UAGAACUGUCUUAGAAUGUG   Cauuc aag ugau  uc  c
 ||||||||||||||||||||   ||||| ||| ||||  ||  u
 aucuuggcagaaucuuacac   guaag uuc acua  ag  u
a                    agc     a   c    aa  cu 


mirna_id: gma-MIR4379
hairpin:
u           CU     A   CUaa    a   caaa  c 
 UAGAGUGUAUA  GUGAG GGC    cuca ccc    ag u
 |||||||||||  ||||| |||    |||| |||    ||  
 aucuuauauau  uauuc ccg    gagu ggg    uc a
a           -u     c   uugg    a   -aac  a 


mirna_id: gma-MIR482b
hairpin:
           -AUU           uc    ag 
ggUAUGGGGGG    GGGAAGGAAUa  caua  c
|||||||||||    |||||||||||  ||||  a
CCAUACCCUCC    CCCUUCUuuau  guau  a
           ACAU           -c    aa 


mirna_id: gma-MIR4380b
hairpin:
                         a          u 
gcguacggaucaacaauccguauga ccauauggau g
||||||||||||||||||||||||| |||||||||| g
ugcaugccUAGUUGUUAGGCAUACU GGUAUgccua c
                         -          a 


mirna_id: gma-MIR4381
hairpin:
-       a    g  a           ca u       aacauuauaugucacgauuuuauuagagg 
 cuuguca cguu ac gucacaugucg  c uuuauug                             u
 ||||||| |||| || |||||||||||  | |||||||                             u
 GAACAGU GCAA UG CAGUGUAUagc  g aaauaac                             g
u       G    A  G           ac u       cugcaacuaaaacaugugaauuaauuaca 


mirna_id: gma-MIR4382
hairpin:
       aa                             c      a    a                 c    -------------    a 
guacaua  uucagauccaugaaaucaguuaacauaug ccuuac gaca uauuccuacuuccccau uggc             ucug u
|||||||  ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||| ||||             ||||  
cauguau  aagucUAGGUACUUUAGUCAAUUGUAUau ggaaug cugu auaaggaugaaggggua acug             agac a
       ca                             a      c    g                 u    aaauucaaacuag    c 


mirna_id: gma-MIR4383
hairpin:
                         -     ccgaucgauuuuaaucgaaucaucucagauca 
ggaccgguucaacugagauccggua ccuaa                                a
||||||||||||||||||||||||| |||||                                 
uCUGGCCAAGUUGACUCUAGGUUAU ggauu                                u
                         u     aaccuagucaaaauauaaucuagccagugugu 


mirna_id: gma-MIR1520k
hairpin:
u         a            c                agucaaugaaaacagcaauguau 
 ucuuauugg ugaugauuguca gugucauguucugauu                       u
 ||||||||| |||||||||||| ||||||||||||||||                        
 agaauaacc acuacUGACAGU CACAGUACAAGACUAA                       u
a         a            A                ccuacaguugugguacuuucuac 


mirna_id: gma-MIR1520l
hairpin:
                      a         ---      gaaaacaaca   c 
gaugaugauugucacgugucau uucugauug   gucaau          aug a
|||||||||||||||||||||| |||||||||   ||||||          ||| u
uuacuacUGAUAGUGCACAGUA AAGACUAAc   caguug          uac u
                      C         uua      agguauauuc   u 


mirna_id: gma-MIR1520m
hairpin:
u                c         c           uggaugucaacuccauaaaagaug 
 ucuuauuggaugauga uguuacgug cauguucugau                        a
 |||||||||||||||| ||||||||| |||||||||||                         
 agaauaacuuacuauU ACAGUGUAC GUACAAGACUA                        a
a                A         A           Acuauuuacuuuuguuguuaagua 


mirna_id: gma-MIR4384
hairpin:
                       C       a 
gAAUCAGACACUGCAUUCAAAGA Gguuauu u
||||||||||||||||||||||| |||||||  
cuuagucugugacguaaguuucu ccaauaa g
                       a       u 


mirna_id: gma-MIR1520n
hairpin:
          a               ---   uc   uc  uuaaaaa 
auugucaugu uuauguuuugauuga   aug  aau  ca       u
|||||||||| |||||||||||||||   |||  |||  ||       a
ugACAGUGCA AGUACAAGACUAACU   uac  uua  gu       a
          C               aau   uu   uu  uauguaa 


mirna_id: gma-MIR1520o
hairpin:
u           a                                  a  u           g         u  ua     ucuaug       aa 
 uacaaaagaau uugauugucaugugucacauucugauuggaugau ac gucauguguua guuuugauu aa  uugac      gacgaug  a
 ||||||||||| |||||||||||||||||||||||||||||||||| || ||||||||||| ||||||||| ||  |||||      |||||||   
 auguuuucuua aacugacaguguACAGUGUAAGACUAACCUGCUA Ug uaguguacagu caagauuaa uu  aacug      uuguuau  a
a           c                                  C  u           g         c  gc     ---uug       gu 


mirna_id: gma-MIR4385
hairpin:
u     a  u   C                 GGUg         aua 
 uguaa ua AAU GAUGUAGAAAAGUGAUU    acauugauu   a
 ||||| || ||| |||||||||||||||||    |||||||||    
 auauu au uua cuacaucuuuuuauuaa    uguaacuaa   c
a     a  u   a                 aaga         gac 


mirna_id: gma-MIR4386
hairpin:
     -                C   A 
ucUCG AAGGUUCUGGAGAGGA UGC u
||||| |||||||||||||||| |||  
agagc uuccaagaucucuccu gcg u
     c                a   u 


mirna_id: gma-MIR4387a
hairpin:
                    ac     c  g     c         c c    ac 
acgaagugucaugucaucac  cuugu ac gacac ucauuguca g cauc  c
||||||||||||||||||||  ||||| || ||||| ||||||||| | ||||   
ugcuUCACAGUGCAGUAGUG  GAACA ug uugug aguaacggu c guag  u
                    CA     A  a     c         a a    cu 


mirna_id: gma-MIR4388
hairpin:
ga a                                             cgacuuuacauuccguuugucacgguguua 
  c cugucaauuuggucuuuaagauuuaaaaaaugucaaaaugauccu                              g
  | |||||||||||||||||||||||||||||||||||||||||||||                               
  g GACAGUUAAACCAGGGAUUCUAAauuuuuuauaguuuuacuagga                              g
cc C                                             accgugcaaucagggacggcaaucaucaga 


mirna_id: gma-MIR4387d
hairpin:
                     u    u      c   u        c  cac 
gagugucacguuaucaugucu guca ugacau uca ugucaugu au   c
||||||||||||||||||||| |||| |||||| ||| |||||||| ||    
cucacagugUAGUAGUACGGA UAGU ACUGUA agu acagugca ua   u
                     U    C      u   u        a  acu 


mirna_id: gma-MIR4389
hairpin:
      -         A      C     cuaguggccuaaccagaucgguuuuacuauuggauugaucaugc 
cggUCG GUCGGACCG UCCAAU GGAAu                                            a
|||||| ||||||||| |||||| |||||                                             
gccggc cagccuggc agguug ccuua                                            a
      u         c      a     agcuauguauuagccggcucaaacuaguccaguaaguuccaauu 


mirna_id: gma-MIR4390
hairpin:
c                    u    uu auu 
 guacccgauacucgaugggu ugag  u   g
 |||||||||||||||||||| ||||  |    
 UAUGGGCUAUGGGCUGCUCA GCUc  a   u
c                    U    cu cuc 


mirna_id: gma-MIR4391
hairpin:
        c         ---                           -uu   uagaca 
ggaccaag uguucuucu   uaguucuuugccgagagcuuaugaaaa   uug      u
|||||||| |||||||||   |||||||||||||||||||||||||||   |||      c
cuugguuu acaaGAAGA   AUCAAGAAACGGCUCUcgaauacuuuu   aac      a
        a         AGA                           uau   uacaac 


mirna_id: gma-MIR4392
hairpin:
   c       -             u      --  ca    aca  aa    uua 
aca uuccgag ucauauuuucgca agaaaa  gc  ccga   gg  cuug   c
||| ||||||| ||||||||||||| ||||||  ||  ||||   ||  ||||    
ugu aAGGCUU AGUGUAAAAGCGU Ucuuuu  ug  ggcu   cu  gaac   a
   c       U             C      uu  aa    -ag  ag    cau 


mirna_id: gma-MIR4343b
hairpin:
u           AG                    
 uuucuUCUUAC  AUCAAGUUGAUUCGGAaga 
 |||||||||||  |||||||||||||||||| g
 aaaggagaaug  uaguucagcuaggccuuca 
a           cu                    


mirna_id: gma-MIR167g
hairpin:
      u      U    G         Ag      uu 
cagcag UGAAGC GCCA CAUGAUCUG  uuuacc  c
|||||| |||||| |||| |||||||||  ||||||  u
guuguc acuucg cggu guacuagac  gaaugg  a
      c      u    -         aa      uu 


mirna_id: gma-MIR4393a
hairpin:
c  a   c          c    c           -  aaaaucacacaguuuuaaaauugaaucac 
 ug cuu ucugcugucc uuuc cagcugucccu ug                             a
 || ||| |||||||||| |||| ||||||||||| ||                             a
 aC GAA AGACGGCAGG AAAG GUugacaggga ac                             a
a  C   A          A    A           c  agcagguacaucaacacaauuauaaauua 


mirna_id: gma-MIR4394
hairpin:
-uu   u                           aaaaaacaa  a 
   gcc ccuuucucuuugguccauuuuagugug         gg g
   ||| |||||||||||||||||||||||||||         || u
   CGG GGAAAGAGAAAUCAGGUAAagucacac         cc c
gGC   -                           ---auauac  u 


mirna_id: gma-MIR4395
hairpin:
       c                  CU    u            c      a 
gaugagg ucUGGAUAGGAGUAUGGG  UGAG aagcugcugccu agucca a
||||||| ||||||||||||||||||  |||| |||||||||||| |||||| c
cuacucc agaccuauccucauaccc  gcuc uucgacgacgga ucgggu u
       a                  ag    u            u      u 


mirna_id: gma-MIR4396
hairpin:
                     AU    A 
aaauaUGUAGUUUCUAAGACG  GCUG C
|||||||||||||||||||||  ||||  
uuuauacauuaaagauucugu  cgau g
                     cc    u 


mirna_id: gma-MIR4397
hairpin:
u         g          G           U U        cau     uc   a   ggaagg         acaa 
 uuucuagug ucgccgCAUC UUGACGCUGAC G ACGuacuu   cuccu  aga uuc      augccauaa    g
 ||||||||| |||||||||| ||||||||||| | ||||||||   |||||  ||| |||      |||||||||     
 aaagaUCAU AGCGGUGUAG AACUGUgacug c ugcauggg   gaggg  uuu aag      uaugguauu    c
a         A          A           c c        aau     uu   a   -----a         acac 


mirna_id: gma-MIR1520r
hairpin:
        u           CAUC           -    a   ugcguccaagaau 
acauugac gucacgUGUCA    CUGGUUGGACA UGAA aga             c
|||||||| |||||||||||    ||||||||||| |||| |||              
uguaacug caguguacagu    gacuagccugu acuu ucu             c
        c           acaa           u    a   uuuuacaauauua 


mirna_id: gma-MIR4398
hairpin:
    aaa      a       cu   ag     c 
gacu   uuuugu uuuucau  uuc  ugacg a
||||   |||||| |||||||  |||  |||||  
cuga   AAAGCA AAGAGUG  AGG  ACUGU u
    ---      G       --   CG     u 


mirna_id: gma-MIR4399
hairpin:
caauu      g           uc   c        a         g    ag   gu  aauua       cacau 
     uauuau ugucguuaguc  uuu uguuaagu augacgugg agac  agu  ca     ucauuga     u
     |||||| |||||||||||  ||| |||||||| ||||||||| ||||  |||  ||     |||||||     a
     augaug aCAGCAAUCAG  AAA GCAAUUca uacuguacc ucug  uca  gu     aguaacu     u
-----      g           GA   A        c         g    cu   ug  ---gc       uccuc 


mirna_id: gma-MIR4400
hairpin:
                              A G     acuccgaaaaacuccuagaagaaccuucuuccggaagaa 
cggaagacucuucuUUCGGAAAAAUUCUGG A ACGUC                                       g
|||||||||||||||||||||||||||||| | |||||                                       a
gucuucugggaagaaagcuuuuuuaaggcc u ugcag                                       a
                              c g     gaacgucuugcauaagaccucaagaagcccuccgggugg 


mirna_id: gma-MIR4393b
hairpin:
u  a          a              g    ca                  a 
 ug cuucucugcu ucccuuuucaaguu uccc  ugcuuucccuucaaaacg c
 || |||||||||| |||||||||||||| ||||  ||||||||||||||||||  
 aC GAAGAGACGA AGGGAAAAGUUcga aggg  acgaaagggaaguuuugc a
a  C          C              a    ac                  u 


mirna_id: gma-MIR156f
hairpin:
-auaucuc   U       -A             -a     g  u   u    g 
        aug UGACAGA  GAGAGAGAGCACA  cccgg aa ggu aaag a
        ||| |||||||  |||||||||||||  ||||| || ||| ||||  
        uac acugucu  uucucucucgugu  ggguu uu ccg uuuc g
acuuacac   u       cc             ga     g  u   -    u 


mirna_id: gma-MIR4401a
hairpin:
      u                    a                      u   a u 
cgucuu gaaugccuacuuucaaagac uuguugagguaagcaccgucuu gaa g a
|||||| |||||||||||||||||||| |||||||||||||||||||||| ||| |  
gcagaa cUUACGGAUGAAAGUUUCUG AACAacuccauucgugguagaa cuu c c
      u                    C                      u   a g 


mirna_id: gma-MIR4402
hairpin:
----a                            c  a                     aa    u   caaaggggauuuagucaacuc 
     cguuugaggcccauaauauguuaaaaug uc aaauuaaaugaggaauccccu  caaa auc                     a
     |||||||||||||||||||||||||||| || |||||||||||||||||||||  |||| |||                      
     GCAGACUCUGGGUAUUAUACAguuuuac ag uuuaauuuacuccuuagggga  guuu uag                     u
uaCAG                            a  c                     cc    u   aauuuaggauaaaaaccuuuu 


mirna_id: gma-MIR4403
hairpin:
     G        A       CG   acggacacgugaauaccugucaaa 
gacAC GACACCGA CACGACA  GAC                        c
||||| |||||||| |||||||  |||                        a
cugug cuguggcu guguugu  cug                        c
     g        -       ag   cgggcacaggcccaacuuaaacua 


mirna_id: gma-MIR1520p
hairpin:
                            G  a    u    ag a      aau    acuuc        u 
acaugucAUGUUGUUAUUGGAUGAUGAC GU acau uuau  u ugauug   guca     augaaaga a
|||||||||||||||||||||||||||| || |||| ||||  | ||||||   ||||     |||||||| a
uguacagugcaacaauaaccuacuacug ca ugua aaua  a acuaac   cagu     uacuuuuu u
                            a  g    c    ca a      ---    -----        u 


mirna_id: gma-MIR4404
hairpin:
a              G         cuuaa 
 AUUCGUGGAAGACU GCGGAUCAA     u
 |||||||||||||| |||||||||      
 uaggcacuuucuga cgcuuaguu     c
c              g         cacgc 


mirna_id: gma-MIR4405
hairpin:
c                CU G                 gcgcgguggcaaacuuguaauuaa 
 AUUCUAAGACGGUUAU  G GACCgucuuagaaugug                        g
 ||||||||||||||||  | |||||||||||||||||                         
 uaagauucugccaaua  u uuggcagaauuuuacac                        a
a                ac g                 acaacauuuuucuuuaaagcucau 


mirna_id: gma-MIR4406
hairpin:
caa         A        GA              a    c            - - uuc 
   ucuauAUUG UUCUGAGA  ACCGGUGUAgaaug uaau auucuaagacgg c c   g
   ||||||||| ||||||||  |||||||||||||| |||| |||||||||||| | |    
   agauguagc aagacucu  uggcuacaucuuac auug uaagauuuugcc g g   a
gua         c        gc              g    c            a u uac 


mirna_id: gma-MIR4407
hairpin:
      ucug          -            g   a   aau      ----u  cuuc      uu 
aaguug    gguugaggua aaguguugcuuc ucu agu   uaaugu     gc    auucaa  c
||||||    |||||||||| |||||||||||| ||| |||   ||||||     ||    ||||||   
uucaau    ucaacuCCAU UUCACGACGAAG AGA uca   auuacg     cg    ugaguu  a
      -uaa          G            G   C   --c      ugcau  -cau      ua 


mirna_id: gma-MIR4408
hairpin:
c    c     c             a                 u    a    a c   a    u   cu 
 caau ggaau uuucuuccaaccu cauccaauguuguuaaa gacc uuau g gcc ccau aug  a
 |||| ||||| ||||||||||||| ||||||||||||||||| |||| |||| | ||| |||| |||   
 guua cuuua aaagaAGGUUGGG GUAGGUUACAACAAUuu uugg aaua c cgg ggua uac  g
-    a     u             A                 u    a    c a   c    u   aa 


mirna_id: gma-MIR4409
hairpin:
uccauuag       AG       G UG      
        aaUAACA  UGGGUUU U  ACUGa 
        |||||||  ||||||| |  |||| a
        uuauugu  auccaaa a  ugaua 
-----uca       -a       a gu      


mirna_id: gma-MIR4410
hairpin:
acgg    U      C               a   a 
    auUA GUUGAU CGUAUGAGUCGUACg auu a
    |||| |||||| ||||||||||||||| ||| c
    uagu uaacua guauacucagcaugc uag u
----    u      a               c   u 


mirna_id: gma-MIR169d
hairpin:
--   u         U          U     --     U   au 
  aga uaguggaug GAGCCAAGGA GACUU  GCCGG ugu  a
  ||| ||||||||| |||||||||| |||||  ||||| |||   
  ucu aucauuuau cuugguucuu cugaa  uggcc acg  a
au   u         u          c     uu     c   au 


mirna_id: gma-MIR4411
hairpin:
----a      uua               c 
     cgacga   auuaguuguaguaau a
     ||||||   ||||||||||||||| u
     GCUGUU   UAAUCAAUGUUAUUa g
ccaUG      ---               a 


mirna_id: gma-MIR1520q
hairpin:
ugg     c        a       aa               ug    g   a  cc 
   uguca gugucaug ucugauu  uuaauaaaaauaaca  acau uca cu  a
   ||||| |||||||| |||||||  |||||||||||||||  |||| ||| ||  u
   acagu CACAGUAC AGACUAA  AGUUAuuuuuguugu  ugua agu ga  a
-ua     A        A       CC               ua    a   a  aa 


mirna_id: gma-MIR172f
hairpin:
  g                     a   --g    -c  ag     --g   -  g  u   au  aa 
gc gauguagcaucaucaagauuc cau   caaa  gc  guggu   ggu gg ac gug  gc  u
|| ||||||||||||||||||||| |||   ||||  ||  |||||   ||| || || |||  ||  c
cg cuACGUCGUAGUAGUUCUAAG gug   guuu  ug  uaccg   cca cc ug cau  ug  u
  a                     A   aag    uc  ga     aaa   a  g  u   cg  aa 


mirna_id: gma-MIR171c
hairpin:
    g   u  A        UG             -- g    u     aug 
uuaa aac ug GAUAUUGG  CGGUUCAAUCaga  a gcag guuuu   a
|||| ||| || ||||||||  |||||||||||||  | |||| |||||    
aguu uug AC CUAUAACC  GCCGAGUUaguuu  u uguc cgaaa   u
    a   u  A        GU             au g    u     acc 


mirna_id: gma-MIR169e
hairpin:
      c    a a  u         gcuuu     C       A     C    uaauu 
gucuug auga g gg agagagagu     ugAGC AAGGAUG CUUGC GGcg     a
|||||| |||| | || |||||||||     ||||| ||||||| ||||| ||||     c
cagaau uacu c cu uuucucucg     acuug uuccuac gagcg ccgu     g
      a    - a  -         uauuc     -       a     a    uaugg 


mirna_id: gma-MIR394b
hairpin:
       gu   -      U C            -    - -u  -----u   u 
uaacaga  uua UUGGCA U UGUCCACCUCCa cuuc c  ac      cuc c
|||||||  ||| |||||| | |||||||||||| |||| |  ||      ||| u
guugucu  agU AACUGU A ACGGGUGGAggu gaag g  ug      gag c
       ug   C      C U            u    u cu  uacacc   u 


mirna_id: gma-MIR4412
hairpin:
        C   U    U    U      g  --   ug  ccu 
aacUGUUG GGG AUCU UGCC Cugaag aa  agu  ug   a
|||||||| ||| |||| |||| |||||| ||  |||  ||    
uugaCAAC CCC UAGA GCGG GAuuuc uu  ucg  au   u
        A   C    U    U      g  au   gu  uau 


mirna_id: gma-MIR4413a
hairpin:
ucauc                            auua g a   u 
     aauAAGAGAAUUGUAAGUCACUGuauua    g a cug u
     ||||||||||||||||||||||||||||    | | ||| g
     uuauucucuuaacauucagugacauagu    c u gau a
---aa                            ---a g a   u 


mirna_id: gma-MIR156g
hairpin:
ugaacaauaucu   ac   u                          --  a      c     a 
            uga  agu uguugACAGAAGAUAGAGAGCACAGg  ug ucauac caaaa a
            |||  ||| ||||||||||||||||||||||||||  || |||||| |||||  
            acu  uca guaacugucuucuaucucucguguuu  ac agugug guuuu g
------------   cu   u                          ug  g      u     c 


mirna_id: gma-MIR159d
hairpin:
   ug   u     G     C      UC      uu     -  ucaaua 
ggg  aau gAGCU CUUAG UAUGGA  CCacag  cuacc ca      a
|||  ||| ||||| ||||| ||||||  ||||||  ||||| ||       
ucc  uua uucga ggguc auaccu  gguguu  gaugg gu      g
   gu   c     g     u      uc      cu     u  uuucgu 


mirna_id: gma-MIR394a
hairpin:
             a         u              -      U C            -c   cuacucucucucu 
aucaugaggguuu gcaaagugu gcuaacagaguuua UUGGCA U UGUCCACCUCCa  uuc             c
||||||||||||| ||||||||| |||||||||||||| |||||| | ||||||||||||  |||             u
uaguacuuccgaa ugUUUCACA CGGUUGUCUCGAgu aacugu a acggguggaggu  aag             c
             a         U              c      c u            au   uacccaucucucu 


mirna_id: gma-MIR4414
hairpin:
--      acu     G   AC       C   ag   u       aagauagauugauguucg 
  acugaa   cAGCU CUG  UCGUUGG UCg  agu caccauu                  g
  ||||||   ||||| |||  ||||||| |||  ||| |||||||                  c
  ugacuu   gucga ggc  agcaacc agu  ucg guggugg                  a
gc      -ac     g   gu       u   cu   u       aauuaauguaccgcacuc 


mirna_id: gma-MIR4415a
hairpin:
ug    c g  A                      agcagugacaccaagaaaaaaaaaucccauuauaaacauuuuuuccccucaauc 
  gcug a cA GUUGUGAUGAGAAUCAAUGgca                                                      u
  |||| | || ||||||||||||||||||||||                                                       
  ugac u GU CAACACUACUCUUAGUUaccgu                                                      u
--    c G  A                      caacaccuaaauauaggaaguuguggucaaucggauuacuauaugauacucuuc 


mirna_id: gma-MIR4416a
hairpin:
----     au           aa  g         ggauuggguucaguucuggucucacacggu 
    cuuug  cugggugagag  ac cguaucgau                              u
    |||||  |||||||||||  || |||||||||                               
    gagac  GAUCCACUCUC  UG GCAuagcua                              u
cguu     cG           GC  G         guuuugugucagucauguuuaacaaucuug 


mirna_id: gma-MIR396e
hairpin:
     c          U       C     ugugaggcuucucuccaaugaagguu 
gugau UUCCACAGCU UCUUGAA UGUgu                          u
||||| |||||||||| ||||||| |||||                           
cacua aaggugucga agaacuu acacg                          a
     a          u       a     aguaucuuaaagaaaacguaucccau 


mirna_id: ath-MIR3932a
hairpin:
u c      a       auc           u   uucaaa   a a    uu   ga  uu 
 g ucuucu ugucuuc   gucaucacaaa uuc      cuu a uauc  aag  cc  c
 | |||||| |||||||   ||||||||||| |||      ||| | ||||  |||  ||   
 c aggaga auaGAAG   CAGUAGUGUUU AAg      gag u auag  uuc  gg  a
a u      c       CAA           C   caauua   a a    --   -a  ca 


mirna_id: ath-MIR3932b
hairpin:
aguguuugacgugcuc    u   ccuuua       a             u   uucaaa   a a    uu   ga  uu 
                gauc gcu      ugucuuc uugucaucacaaa uuc      cuu a uauc  aag  cc  c
                |||| |||      ||||||| ||||||||||||| |||      ||| | ||||  |||  ||   
                cuag cga      acaGAAG AACAGUAGUGUUU AAg      gag u auag  uuc  gg  a
--------gaacuaaa    u   -----c       C             C   caauua   a a    --   -a  cc 


mirna_id: ath-MIR3933
hairpin:
         A               G           uacaaa 
cuuagaAGA GCAAAAUGACGACUC Gacaacaauaa      a
||||||||| ||||||||||||||| |||||||||||       
gaaucuucu cguuuuacugcugag cuguuguuauu      c
         a               g           cauaau 


mirna_id: hsa-mir-3934
hairpin:
-cacagccc       cc   g  uU   G    G  A     G    ag  ag 
         uuccugu  cca uu  CAG UGUG AA CUGAG CAGg  gc  u
         |||||||  ||| ||  ||| |||| || ||||| ||||  ||   
         agggacg  ggu aA  GUC ACAC UU GACUC GUuc  ug  g
ccuaaguuu       -a   g  GG   G    G  G     -    aa  aa 


mirna_id: hsa-mir-3935
hairpin:
ggau      -     cca --a   --a    a  g         ug     a 
    guguuc cuguc   g   agg   gcug ug uuguaucua  aaggu a
    |||||| |||||   |   |||   |||| || |||||||||  |||||  
    cguaag gacgg   c   ucc   CGAC AC AGCAUAGAU  uuuua g
-auu      a     aaa gaa   CAC    C  G         GU     c 


mirna_id: hsa-mir-3936
hairpin:
--a  a uc  a         --ca            g      caaau  ----    u 
   ug u  ag gcaucuguc    gugucugcugua aucccu     cc    gugu u
   || |  || |||||||||    |||||||||||| ||||||     ||    ||||  
   ac g  uc cguagacag    CGUAGACGGUAU UGGGGA     gg    cgca g
acg  - gu  a         cccA            G      ---AU  ucuu    g 


mirna_id: hsa-mir-3937
hairpin:
---agaa  -       a         a           uc         -  a 
       ga augccca ccagcccuc guugcuacagu  ccuguuguu uc g
       || ||||||| ||||||||| |||||||||||  ||||||||| || c
       cu uacgggu ggucgGGGG UAACGAUGUCG  GGACAacaa ag u
cguguaa  c       a         G           GC         c  c 


mirna_id: hsa-mir-3938
hairpin:
--a   -auu       c      ua a                     uuu 
   gga    uuuaacc gaucac  g uuaucuacaagggaauuuuuu   a
   |||    ||||||| ||||||  | |||||||||||||||||||||    
   ccu    agguugg cugguG  C AAUAGAUGUUCCCUUAAaaaa   a
gua   cggu       a      GC C                     uuu 


mirna_id: hsa-mir-548y
hairpin:
----------gccuaaac                          U            ac 
                  uauuagguuggugcAAAAGUAAUCAC GUUUUUGCCauu  u
                  |||||||||||||||||||||||||| ||||||||||||   
                  augauccaaccacguuuucauuagug caaaaacgguga  c
gggggugucacuuccaca                          c            cu 


mirna_id: hsa-mir-3939
hairpin:
--------c   cuuccaa     ucu     ---u      -a g  g          acc 
         ugg       aggcc   gugug    uccugu  u ug gcgugcacgu   u
         |||       |||||   |||||    ||||||  | || ||||||||||   g
         acc       uucgg   cacac    AGGACA  A AC CGCAUgugua   u
ucuacacaa   -------     --u     CUGU      CC G  G          cac 


mirna_id: hsa-mir-3940
hairpin:
gcuuauc     -aaa         ----         --      C     au 
       gagga    gaucgagGU    GGGUUGGGG  CGGGCU UGggg  u
       |||||    |||||||||    |||||||||  |||||| |||||   
       uuccu    uugguucca    CCCGACCCU  GCCCGA acucu  u
-ucuucc     cuca         UUCA         AG      C     gg 


mirna_id: hsa-mir-3941
hairpin:
gagu     --uuc               g                uugaaa 
    cagaa     ucaucaggcugugau cucaguuguguguaga      g
    |||||     ||||||||||||||| ||||||||||||||||       
    guuuu     gguaguccgAUACUA GAGUCAACACACAUUu      c
-uuu     uccuu               G                uaaucc 


mirna_id: hsa-mir-3942
hairpin:
ucu     ----       c       A C          C       ag    cga 
   ucagu    augacac ucaaagA G AAUACUGUUA CUGAAAU  gcug   a
   |||||    ||||||| ||||||| | |||||||||| |||||||  ||||   g
   aguca    uacugug aguuucU C UUAUGACAAU GACUUUa  ugac   a
--c     cuua       a       A A          A       --    aau 


mirna_id: hsa-mir-3943
hairpin:
---cacacagac g      c      G     AG    C        u g 
            g cagcug ggccUA CCCCC  GCUU ACUUGGCG g a
            | |||||| |||||| |||||  |||| |||||||| | c
            c gucggc ccgggu ggggg  ugaa ugaaucgu c a
cagguccauccu g      a      g     --    a        u a 


mirna_id: hsa-mir-3944
hairpin:
---uccacccag             U U           -A       ------   c 
            caggcgcaggucc G GCAGCAGGCCA  CCGAGAa      gcg c
            ||||||||||||| | |||||||||||  |||||||      |||  
            guccguguccaGG C CGUCGUCCGGU  GGCUUuu      ugc u
gucguaauucua             C U           CG       acccuc   g 


mirna_id: hsa-mir-3945
hairpin:
gau     --ugca g g  -gg             GAG     A  Uaaa 
   guuga      c u ac   ggAGGGCAUAGGA   GGUUG UA    a
   |||||      | | ||   |||||||||||||   ||||| ||    u
   uaacu      g g ug   ccuuucguauucu   ccgac au    g
uag     uaguag g g  aaa             ---     -  uaac 


mirna_id: far-MIR159
hairpin:
guuu    uu  g ug        a   u     u  aa    uu  uag      -    a a   g    u     g uc    uau    c    g uug 
    gguu  ga g  gagcuccu uca uccaa ga  gguc  gc   gagggg uggu c gcu cucg ucaug u  ccac   ccua cucc u   a
    ||||  || |  |||||||| ||| ||||| ||  ||||  ||   |||||| |||| | ||| |||| ||||| |  ||||   |||| |||| |    
    ccgg  cu c  CUCGAGGG AGU AGGUU cu  ccgg  cg   cucccc gcua g cga gagc aguac a  ggug   ggau gagg a   a
---u    uu  a GU        A   U     U  cg    -u  ---      u    c c   g    c     g uc    ucc    a    g cca 


mirna_id: far-MIR160
hairpin:
uuguugcugauggggacaugaccuucgcaugccug   c     g   u       U    -C  U   U     acau 
                                   ucu agcuc ucg gcaUGCC GGCU  CC GUA GCCAc    g
                                   ||| ||||| ||| ||||||| ||||  || ||| |||||     
                                   aga uuggg agu ugugugg ucgg  gg cgu uggug    u
--------uguuuaagguugacugauuaccuaaca   c     -   -       -    uu  u   u     aucc 


mirna_id: far-MIR171
hairpin:
--------------gag                        aca      ug ucucu    a   u  u  c 
                 ugcgauguuggcaugguucaauca   aucgag  g     gcau gcu cc ug u
                 ||||||||||||||||||||||||   ||||||  |     |||| ||| || ||  
                 acgCUAUAACCGUGCCGAGUUAGU   uaguuc  u     cgua cgg gg gc a
cccgauccguccuucga                        --c      gu -ucgu    -   u  u  g 


mirna_id: far-MIR1119
hairpin:
ccagcgagugagcucgcgagcgcggaggagcuggcucagcggcucagcgccucaugcca           gu  c   -  gu 
                                                           gccgugccacg  gg agu cg  c
                                                           |||||||||||  || ||| ||   
                                                           CGGCACGGUgc  cc uca gu  g
--------------------uuuucaucgugaggugagacgaccGACUGAUUCGUAGUG           au  -   u  gu 


mirna_id: far-MIR1122
hairpin:
ucuaaagaaguuauucgcuacaaguuaacaagaugaccgggcauuguacacucaaugaccucacaauaagcacca      -ca   a   a     a       c                 gu   g       u a          -   aua 
                                                                           uuucau   aaa auu cuacu ccuccgu uaaaaauaagugucuua  uuu ucuagau c gauguaucua aac   u
                                                                           ||||||   ||| ||| ||||| ||||||| |||||||||||||||||  ||| ||||||| | |||||||||| |||    
                                                                           aaagua   uuu uaa gauga ggaggca guuuuuauucacagagu  aaa AGAUCUA G CUACAUAGAU uug   u
-----------ugaagaagcaaaacaauagagaaguacaugguguucuaacauacuauuguugaguacaggaccc      uug   a   -     g       u                 ug   a       U C          g   auu 


mirna_id: far-MIR1134
hairpin:
--------------------------------------------------------------------------------------------------------------------------------------------------------------acggcaaucccagcuucaacg        cca     -   u 
                                                                                                                                                                                   ggccggug   ggcgu gcc c
                                                                                                                                                                                   ||||||||   ||||| |||  
                                                                                                                                                                                   cuggcuac   ccgua cgg c
gccugggcaacaaaaagaacgccuucucgucgugccgugggucgcucuacucgcgguggugugacugacucuggcccuaccaucaucggucguggucuggacuaGAGAAGAAGAACAACAACAACAGCggcggcccucucuguggaacacucggucgaccgcacgauccuccgcagccg        ---     g   c 


mirna_id: far-MIR156a
hairpin:
------g  g  cgau   cg     g   cc   g    ug uauc        gaguUGACAGAAGAGAGAGAGCACAgcuggagucgguggcg 
       ca ac    ggu  uggcu gca  gug gugg  g    ccauggcu                                         a
       || ||    |||  ||||| |||  ||| ||||  |    ||||||||                                          
       gu ug    cca  accgg ugu  cgu uacc  c    ggugccga                                         c
cgcagga  g  ---c   au     g   -a   a    gu ----        aggggccaggucucgagggagguccgcccacagaguguccc 


mirna_id: far-MIR396
hairpin:
-------------------------------------    c    cuc    CA                    ucgcgcgcgugcgccgccggccugcua 
                                     gcgg caug   UCCA  GGCUUUCUUGAACUGugaac                           c
                                     |||| ||||   ||||  ||||||||||||||||||||                           u
                                     cgcc guac   aggu  cugaaagaacuugguacuug                           u
accuaggcacaccuuaacggccuccuucuccucucuc    c    aaa    uc                    uucgauccgucuguucuagcuucgcuc 


mirna_id: far-MIR164a
hairpin:
-------------gguag ug  guug      g   uguuauuauugaagcUGGAGA 
                  c  cu    uugcug cac                     A
                  |  ||    |||||| |||                      
                  g  gg    gacggc gug                     G
agguacggugguacuuga gu  ---a      g   acgugaacUCGUUCACGGGAC 


mirna_id: far-MIR169
hairpin:
ggcacgagggcaaagccuuacauggcugcaagggccuuaccucuga         A     U       --u    -uu     cuca  u  cu 
                                              UAGCCAAGG UGACU GCCUAug   cuuc   ccucc    ga gc  a
                                              ||||||||| ||||| |||||||   ||||   |||||    || ||  a
                                              aucgguucc acuga cggguac   gggg   ggagg    uu cg  u
----------------------------------ucggugaguccg         -     -       ucu    ugu     ----  c  au 


mirna_id: far-MIR437
hairpin:
auguuguaaauacugacaguuuuuacaaaaaaaucuggucAAACAUAGAGAAGUUUGACUUaggacaaaacuagaacuucaau    uu   --a    u  a  au   cca 
                                                                                   uauu  gga   cgga gg gu  uca   a
                                                                                   ||||  |||   |||| || ||  |||   c
                                                                                   auaa  ccu   gccu cc ca  agu   a
-----------------------------------------------------------------caaaucugaaguuccggu    uu   cac    u  -  -c   aau 


mirna_id: far-MIR529
hairpin:
--------------------------------u      g      accguggguggugguaucccauggcugag 
                                 ggucgu gcuggc                             u
                                 |||||| ||||||                              
                                 ccagcg cggcug                             a
aggucucgagggagguccgcccacagagugucc      g      agUUCGACACGAGAGAGAGAAGAcaguuc 


mirna_id: far-MIR156b
hairpin:
------g  g  cgau   cg     g   cc   g    ug uauc        gagUUGACAGAAGAGAGAGAGCACagcuggagucgguggcg 
       ca ac    ggu  uggcu gca  gug gugg  g    ccauggcu                                         a
       || ||    |||  ||||| |||  ||| ||||  |    ||||||||                                          
       gu ug    cca  accgg ugu  cgu uacc  c    ggugccga                                         c
cgcagga  g  ---c   au     g   -a   a    gu ----        aggggccaggucucgagggagguccgcccacagaguguccc 


mirna_id: far-MIR166
hairpin:
uuucggcaacuuuggcaggcuccaugccuacgaggccgcaagcucgcgcagcuauacccgcgcaacc   c   -a   - aau        
                                                                   aug gag  ugg c   gauucca 
                                                                   ||| |||  ||| |   |||||| a
                                                                   UAC UUC  ACC G   Cuaaggu 
---------------------------------------------ccgugcuccgguuuacgGACCC   -   GG   A -GC        


mirna_id: ssc-mir-30c-1
hairpin:
---c    ugc U       U   ACA        ug gag 
    guag   g GUAAACA CCU   CUCUCAGC  u   c
    ||||   | ||||||| |||   ||||||||  |   u
    cguc   c CAUUUGU GGG   GAGGGUCg  g   c
guac    uuc U       U   --A        gu gag 


mirna_id: ssc-mir-126
hairpin:
      - a           U       C cug   c 
cgacgg g CAUUAUUACUU UGGUACG G   uga a
|||||| | ||||||||||| ||||||| |   |||  
gcuguc C GUAAUAAUGAG GCCAUGC c   acu c
      G -           U       U -aa   u 


mirna_id: ssc-mir-149
hairpin:
    a   U U G      G     A     -gug  u 
gccc ggc C G CUCCGU UCUUC CUCCC    ug g
|||| ||| | | |||||| ||||| |||||    ||  
cggg ucg g c ggggca ggagg gaggg    gc u
    g   u u g      g     -     agga  c 


mirna_id: ssc-mir-199a-1
hairpin:
u  -   gcC       U        C   --UCa  ac 
 cc guc   CCAGUGU CAGACUAC UGU     gg  a
 || |||   ||||||| |||||||| |||     ||   
 gg cag   GGUUACA GUCUGAUG ACA     cc  a
g  u   AUU       C        -   uguug  gu 


mirna_id: ssc-mir-378-2
hairpin:
gu      c    agg    cagaacca  g    aa 
  gggccu cuga   cagg        uu ggug  a
  |||||| ||||   ||||        || ||||  a
  ccCGGA GACU   GUUC        AG UCAc  g
-g      A    GAG    --------  G    ga 


mirna_id: ssc-mir-451
hairpin:
g  g ug     cA                 A 
 gg g  gcgag  AACCGUUACCAUUACUG G
 || |  |||||  |||||||||||||||||  
 cc c  cguuc  uuggcaaugguaaugau U
-  a gu     uc                 U 


mirna_id: ngi-mir-iab-8
hairpin:
ugUU            G    A  G  caga 
    ACGUAUACUGAA GUAU CC ga    a
    |||||||||||| |||| || ||    a
    ugcauaugacuu caua gg cu    u
----            a    -  a  caca 


mirna_id: ngi-mir-375
hairpin:
u   cca    u  c     uca       g    a 
 ggu   ucga cc aacga   auaaacu uguu u
 |||   |||| || |||||   ||||||| ||||  
 cuA   AGCU GG UUGCU   UGUUUga acaa u
a   UUG    C  C     ---       -    a 


mirna_id: ngi-mir-1
hairpin:
---cu            c    uuc     -  gc 
     guuccgugcuuc uuac   ccaua gu  a
     |||||||||||| ||||   ||||| ||  c
     cGAGGUAUGAAG AAUG   GGUau ca  g
cgcgc            A    UAA     g  gu 


mirna_id: ngi-mir-275
hairpin:
-   a u         - c       ac      gc 
 gca c cgcgcuacu c gguacuu  gacugu  a
 ||| | ||||||||| | |||||||  ||||||  u
 cgu G GCGCGAUGA G CCAUGGA  CUgaua  u
g   c C         A U       --      gc 


mirna_id: ngi-mir-31a
hairpin:
----------gaa   AA     C           ugcuu 
             GGC  GAUGU GGCAUAGCUGA     u
             |||  ||||| |||||||||||     u
             ccg  cuaca cugugucggcu     g
acucgcaaaccga   ac     -           uuaaa 


mirna_id: ngi-mir-281
hairpin:
cg             -ua     c      a g  g 
  cuauaaagagagc   uccau gacagu u gu a
  |||||||||||||   ||||| |||||| | || u
  gguGUUUCUCUCG   AGGUA CUGuca a ua a
ca             UUC     -      c g  g 


mirna_id: ngi-mir-14
hairpin:
ucgcucg           u      cu    u    a g   ucc 
       gucaguggggg gagaaa  ggcu ggcu u uac   c
       ||||||||||| ||||||  |||| |||| | |||    
       cgguuAUCCUC CUCUUU  CUGA CUga a gug   c
-------           U      UU    -    c g   uua 


mirna_id: ngi-mir-34
hairpin:
-   g    -----G       G U    U        agauu 
 ggc uguu      GCAGUGU G UAGC GGUUGugu     a
 ||| ||||      ||||||| | |||| ||||||||      
 cug gcag      cgucacg c aucg ccagcacg     u
g   -    uauuaa       g u    -        aaaga 


mirna_id: ngi-mir-219
hairpin:
ugucu     ua    U    AA            ---   gug 
     cgggc  UGAU GUCC  ACGCAAUUCUUG   ucu   c
     |||||  |||| ||||  ||||||||||||   |||    
     gcucg  acua cagg  uguguuaagaac   aga   c
-----     cg    -    gg            cau   guu 


mirna_id: ngi-mir-283
hairpin:
-------   gu AA        U  U         aua uu 
       gua  c  AUAUCAGC GG AAUUCUggg   c  a
       |||  |  |||||||| || |||||||||   |  u
       cau  g  uauggucg uc uuaggaccc   g  u
ggucaag   ug cc        u  -         gac ua 


mirna_id: ngi-mir-2
hairpin:
----------ca    uuuac              u  c    ggc 
            ugcu     caucaaagcugguu gu auag   u
            ||||     |||||||||||||| || ||||    
            aCGA     GUAGUUUCGACCGA CA UAUc   u
gccuguguuaaa    -----              -  C    agc 


mirna_id: ngi-mir-927
hairpin:
agacaauaag   aua           A   CU       A   g   u 
          gug   uuugUUUUAGA UUC  ACGCUUU CCg uuu u
          |||   ||||||||||| |||  ||||||| ||| |||  
          cac   aaacaaaaucu aag  ugcgaaa ggu aaa u
--------ua   -ga           g   uu       c   -   u 


mirna_id: ngi-mir-263b
hairpin:
agguu ug      CU     C  G    A     a   g    gu 
     c  gcgggu  UGGCA UG AAGA UUCAC gau ugcg  u
     |  ||||||  ||||| || |||| ||||| ||| ||||   
     g  cgccca  accgu ac uucu aggug cua augu  g
----- gu      uu     a  g    -     -   -    gu 


mirna_id: ngi-mir-13a
hairpin:
cu       u    -ua       u         a   ucuc 
  uuugcgg ccga   caucaaa ugguugugg aug    g
  ||||||| ||||   ||||||| ||||||||| |||    u
  agaugcc gguu   GUAGUUU ACCGACACU Uac    c
-a       c    cGA       U         A   cuuu 


mirna_id: ngi-mir-137
hairpin:
---      ug  g   c       ug  g   u    - a a 
   ccaggu  gc acg guauucu  gg aau aaca c c u
   ||||||  || ||| |||||||  || ||| |||| | |  
   gguccg  ug UGC CAUAAGA  UC UUA UUgu g g a
gcu      uu  A   A       GU  G   -    c c c 


mirna_id: ngi-mir-184
hairpin:
--c   -   aaa c         -      u   g   -  uaaa 
   gug ccu   g cccuuauca uucucc guc agu gu    a
   ||| |||   | ||||||||| |||||| ||| ||| ||    u
   cau ggg   c GGGAAUAGU AAGAGG CAG Uca ca    u
aga   u   agc C         C      -   G   g  ucuc 


mirna_id: ngi-mir-210
hairpin:
u   --     g gc        gc   -         uuaga 
 gga  cccca u  agcugcug  cac ugcacaaga     c
 |||  ||||| |  ||||||||  ||| |||||||||     a
 ccu  ggggu g  UCGGCGAC  GUG GCGUGUUcu     u
a   uc     g uA        -A   U         cagaa 


mirna_id: ngi-mir-277
hairpin:
gg    cu    -c           - c         ---------- g 
  cagg  gggg  ucgugccagau g gcguuuaca          c a
  ||||  ||||  ||||||||||| | |||||||||          |  
  gucc  cucu  AGCAUGGUCUA C CGUAAAUgu          g g
--    -u    AC           U A         cauaaguccc a 


mirna_id: ngi-mir-29b
hairpin:
aagaau      a c  a        c     -  c        -   acc 
      uaagau g ag gguacuga uucgg ug gugcuggg guu   g
      |||||| | || |||||||| ||||| || |||||||| |||    
      auucug c uc ucaUGACU AAGUU AC CACGAUcc cga   a
-----g      - -  a        A     U  -        g   acu 


mirna_id: ngi-mir-100
hairpin:
-ua     g   -c    C      CC  -  -   --G  uuu 
   cugau aca  UACC GUAGAU  GA CU GUG   Gc   u
   ||||| |||  |||| ||||||  || || |||   ||    
   gacug ugu  augg caucua  cu ga cgc   cg   a
ccg     a   ac    c      uc  c  a   aua  uau 


mirna_id: ngi-mir-305
hairpin:
gga   ---ug     u     UA     U    UG  CU    au 
   ggc     caugu aAUUG  CUUCA CAGG  CU  Ggug  u
   |||     ||||| |||||  ||||| ||||  ||  ||||  u
   ccg     guaua uuaac  gaggu gucc  gg  ccau  u
---   uguua     c     gc     u    gu  -c    ag 


mirna_id: ngi-mir-932
hairpin:
--    uu   u     A     UA    A      ua     aa 
  cgcg  gcc cuUCA UUCCG  GUGC UUGCAG  gauuu  a
  ||||  ||| ||||| |||||  |||| ||||||  |||||  a
  gugc  cgg ggagu agggc  cacg aacguc  uuaga  g
cu    uu   c     g     gc    -      --     aa 


mirna_id: ngi-mir-92a
hairpin:
------u     aaaa         a   u    g       ucguaau  u 
       ugcau    gauaggucg gau ggug caauguu       gg u
       |||||    ||||||||| ||| |||| |||||||       ||  
       acgua    cUAUCCGGC CUG UCAC GUUAuaa       cc u
uauaauc     -agg         C   U    -       ----cuc  u 


mirna_id: ngi-mir-317
hairpin:
---          a    -      --   c         g aag 
   cucggagaac ggga gccacu  cug guucacucg u   u
   |||||||||| |||| ||||||  ||| ||||||||| |   a
   gagucuuuUG CUCU UGGUGG  GAC CAAGUgggc a   a
cgg          A    A      UC   A         g aga 


mirna_id: ngi-mir-993
hairpin:
gca    -    uc    c      uc        gua  aug 
   cauc guga  uacc uguaga  cgggcuuu   ga   u
   |||| ||||  |||| ||||||  ||||||||   ||   a
   guag cauU  AUGG ACAUCU  GCUCGAAG   cu   g
aca    g    CU    -      CU        --a  aua 


mirna_id: ngi-mir-252
hairpin:
aaucccguc     cc        A U  C       -  --------a    ac 
         cuguu  uAAGUACU G GC GCAGGAG ug         cuag  u
         |||||  |||||||| | || ||||||| ||         ||||   
         gguaa  auucguga c cg cguccuc gc         gauc  g
---------     cu        a u  u       u  gccauuaaa    gg 


mirna_id: ngi-let-7
hairpin:
----     c     U   G                  ggaaugaaaauu 
    cgacg cuggg GAG UAGUAGGUUGUAUAGUgg            c
    ||||| ||||| ||| ||||||||||||||||||             
    gcugu ggccc uuc aucguucaacaugucacc            g
cgcg     u     u   a                  uaagguauuacu 


mirna_id: ngi-mir-929
hairpin:
------a     cu       aA        AG         -  ugcau 
       cuuaa  gggguca  UUGACUCU  UAGGGAGUC Cc     u
       |||||  |||||||  ||||||||  ||||||||| ||      
       gaauu  ccucagu  gacugaga  auccuucag gg     c
acucgca     uu       cg        ca         c  uauaa 


mirna_id: nlo-mir-281
hairpin:
cg             -ua     c      a g  g 
  cuauaaagagagc   uccau gacagu u gu a
  |||||||||||||   ||||| |||||| | || u
  gguGUUUCUCUCG   AGGUA CUGUca a ua a
ca             UUC     -      c g  g 


mirna_id: nlo-mir-282
hairpin:
----------u          CUC       U     GUca  ga 
           GAUUUAGCCU   CUAGGCU UGUCU    gu  a
           ||||||||||   ||||||| |||||    ||   
           cuggauugga   gauccga acaga    ca  a
cuugcucgggg          uaa       u     ---g  aa 


mirna_id: nlo-mir-12
hairpin:
gggugU      U   U           -  cuuu 
      GAGUAU ACA CAGGUACUGGU gu    u
      |||||| ||| ||||||||||| ||     
      uucaua ugu guucaugacca cg    u
------      u   -           g  acuu 


mirna_id: nlo-mir-125
hairpin:
------  c  - g          U  CU    CC   A       --c    c 
      gc gc c cgucgccggu CC  GAGA  CUA CUUGUGA   gucg g
      || || | |||||||||| ||  ||||  ||| |||||||   ||||  
      cg cg g guagcgguua gg  cucu  gau ggacacu   uagc u
guuuuc  u  u a          u  -u    ua   c       cua    a 


mirna_id: nlo-mir-13a
hairpin:
cu       u    -ua       u         a   uuuc 
  uuugcgg ccga   caucaaa ugguugugg aug    g
  ||||||| ||||   ||||||| ||||||||| |||    u
  agaugcc gguu   GUAGUUU ACCGACACU Uac    c
-a       c    cGA       U         A   cuuu 


mirna_id: nlo-mir-252
hairpin:
aaucccguc     cc        A U  C       -  --------a    ac 
         cuguu  UAAGUACU G GC GCAGGAG ug         cuag  u
         |||||  |||||||| | || ||||||| ||         ||||   
         gguaa  auucguga c cg cguccuc gc         gauc  g
---------     cu        a u  u       u  gccauuaaa    gg 


mirna_id: nlo-mir-276
hairpin:
u    g  auc   c    a     ag         guagau 
 ggua ag   cag agcg gguau  aguuccuac      u
 |||| ||   ||| |||| |||||  |||||||||       
 ccgu uc   guU UCGU CCAUA  UCAAGGAUg      u
g    -  -ac   C    G     CU         aaagac 


mirna_id: nlo-mir-315
hairpin:
gcucucuaugcUUU            A       ----   a 
              UGAUUGUUGCUC GAAAGCc    ucg u
              |||||||||||| |||||||    |||  
              acuaauaacggg cuuucgg    agc a
------gcacuaau            -       ucau   u 


mirna_id: nlo-mir-7
hairpin:
-       g     U   A  C          G    uc   uu 
 gagcguc uugua GGA GA UAGUGAUUUU UUGU  uac  a
 ||||||| ||||| ||| || |||||||||| ||||  |||  a
 cucgcag aacau ccu cu aucacuaagg aaca  aug  g
g       a     -   a  a          -    --   ua 


mirna_id: nlo-mir-927
hairpin:
agacaauaag   aua           A   CU       A   guuu 
          gug   uuugUUUUAGA UUC  ACGCUUU CCg    u
          |||   ||||||||||| |||  ||||||| |||    u
          cac   aaacaaaaucu aag  ugcgaaa ggu    a
--------ua   -ga           g   uu       c   aaaa 


mirna_id: nlo-mir-92a
hairpin:
-----u     aaaa         a   u    g       ucguaau  u 
      ugcau    gauaggucg gau ggug caauguu       gg u
      |||||    ||||||||| ||| |||| |||||||       ||  
      acgua    cUAUCCGGC CUG UCAC GUUAuaa       cc u
uuaauc     -agg         C   U    -       ----cuc  u 


mirna_id: nlo-mir-993
hairpin:
ggc     g --u   cuac        uc          uagaau 
   ucauu g   gau    ccuguaga  cgggcuuuug      a
   ||||| |   |||    ||||||||  ||||||||||      g
   aguag c   CUA    GGACAUCU  GCUCGAAGac      u
-ac     g uuU   ---U        CU          uauaga 


mirna_id: hsa-mir-374c
hairpin:
aca    caaug                    CU 
   cgga     AUAAUACAACCUGCUAAGUG  a
   ||||     ||||||||||||||||||||   
   gccu     UAUUAUGUUGGACGAUUCAC  g
uga    accUA                    ag 


mirna_id: hsa-mir-642b
hairpin:
           U                     aucc 
gaguugggaGG UCCCUCUCCAAAUGUGUCUug    c
||||||||||| |||||||||||||||||||||    c
cucaacccuCC AGGGAGAGGUUUACACAGAac    c
           C                     ccca 


mirna_id: hsa-mir-550b-1
hairpin:
a  - ac       ----agAU                  CA  aucuua 
 ga g  uuguugg        GUGCCUGAGGGAGUAAGA  cu      c
 || |  |||||||        ||||||||||||||||||  ||       
 cu c  aacgacc        CACGGACUCCCUCAUUCU  gg      a
a  a ga       gaccacGU                  cg  acaaca 


mirna_id: hsa-mir-550b-2
hairpin:
------aga a  c     agAU                  CAcua    ac 
         g cu gcugg    GUGCCUGAGGGAGUAAGA     ucug  a
         | || |||||    ||||||||||||||||||     ||||  a
         c ga cgacc    CACGGACUCCCUCAUUCU     ggac  c
acuacgaaa -  c     acGU                  ---cg    aa 


mirna_id: hsa-mir-548z
hairpin:
-------aag     a                   a a         c  a 
          uauua guuggugcaaaaguaauug g uuuuugcua ug a
          ||||| ||||||||||||||||||| | ||||||||| ||  
          auaau caaccACGUUUUCAUUAAC C AAAAACggu au a
guaaccguag     c                   G C         a  g 


mirna_id: hsa-mir-548aa-1
hairpin:
-------cuu      uc           a  c             auuac 
          uauuag  uggugcaaaag aa ugugguuuuugcc     u
          ||||||  ||||||||||| || |||||||||||||      
          auaauc  ACCACGUUUUC UU ACACCAAAAAcgg     u
uuuguucaau      ca           A  A             acauu 


mirna_id: hsa-mir-548aa-2
hairpin:
-------uuuua                 a  c                ac 
            uuagguuggugcaaaag aa ugugguuuuugccauu  u
            ||||||||||||||||| || ||||||||||||||||   
            aauccaACCACGUUUUC UU ACACCAAAAAcgguaa  u
cucucccuucua                 A  A                cu 


mirna_id: csi-MIR156
hairpin:
      a cua            -         a   ag    uu     a 
cgagag g   cUGACAGAAGAG AGUGAGCAC cgc  guaa  guauu g
|||||| |   |||||||||||| ||||||||| |||  ||||  |||||  
guuuuu c   gacugucuucuc ucgcucgug gug  cguu  uauaa a
      a ugc            c         c   ga    uc     a 


mirna_id: csi-MIR3946
hairpin:
---auaa   uga    gacaau a       A    A   GAA      A  aacuuuuugcugaaaguagcuuug 
       aga   ugau      g auuUUGU GAGA AGA   GAGAGC Ca                        a
       |||   ||||      | ||||||| |||| |||   |||||| ||                        u
       ucu   auug      c uaagaua uuuu ucu   cuuuug gu                        u
cuaaaaa   -cg    -aaaau a       a    a   gaa      a  aauagauacuuggcuauguguagc 


mirna_id: csi-MIR159
hairpin:
g   ua  ga            ga           ---   ucu   --     ua   u   c g u   c    g uc      u     --g     gauu      u 
 ggu  ag  guggagcuccuu  aguccaaaaga   ggu   agc  aaggg  aau gag u c gag uaug a  ccacag ccuau   uauca    uuaggg u
 |||  ||  ||||||||||||  |||||||||||   |||   |||  |||||  ||| ||| | | ||| |||| |  |||||| |||||   |||||    |||||| u
 cca  uc  cAUCUCGAGGGA  UUAGGUUUuuu   cca   uug  uuccc  uua uuc a g cuu auac u  gguguu ggaua   guggu    agucuu g
-   uc  uc            AG           ucc   uuu   aa     ca   c   c g u   u    g uc      c     gua     -agu      u 


mirna_id: csi-MIR166c
hairpin:
uuccuccucgaucauaca     --     a        uu                c   -u      auuaauu 
                  ugaac  gguug ggggaaug  gucugguucgagauca ucg  ggacga       a
                  |||||  ||||| ||||||||  |||||||||||||||| |||  ||||||        
                  auuug  ucaac cCCCUUAC  CGGACCAGGCUuuagu agu  ucuguu       a
-------------cguua     ac     c        UU                a   uu      auucaau 


mirna_id: csi-MIR166d
hairpin:
uuauaa      -aa    ----a   GA      UU       U    aaucaaauucauuauuug 
      ugaaaa   gggu     UCG  CCAGGC  CAUUCCC ucag                  a
      ||||||   ||||     |||  ||||||  ||||||| ||||                   
      acuuuu   ucua     agc  gguuug  guaaggg aguu                  u
-----a      gga    cuggg   uc      uu       u    gguauuggagaguuuuuc 


mirna_id: csi-MIR167c
hairpin:
uuugagagauUGAAGCUGCCAGCAUGAUCUGguaaucaaccuuuuuguauauauauauauauauuaauuccuuauaguuuuuagauuuaauuucuuuuaauuagauccaugguuucaauucuauugaauaaauggugggguuuuauauuuucgugcaa     -aa    aua      aua       -uaaa  caa    uuuuuuaguuuuauu        uuu     ccua 
                                                                                                                                                              uuauu   gagg   gaugga   gcgccuu     uc   ucac               uugaucuu   ugccc    a
                                                                                                                                                              |||||   ||||   ||||||   |||||||     ||   ||||               ||||||||   |||||    a
                                                                                                                                                              aguag   cuuc   uuauuu   uguggga     ag   agug               aauuggaa   auggg    a
----------------------------------------------------------------------------------------------------------------------uuacucauuaacuucgacguucuacuggacuaccuuggua     aug    -ga      -ag       uuung  -ag    ------------uau        ---     aauu 


mirna_id: csi-MIR167b
hairpin:
-------------a   g   -   - uau   a          A         -  a u      cuu 
              ucg gca cca c   cag UGAAGCUGCC GCAUGAUCU Ua c uuccuc   u
              ||| ||| ||| |   ||| |||||||||| ||||||||| || | ||||||    
              agc cgu ggu g   guc acuuugacgg cguacuaga au g aaggag   g
gaccugagcauuaa   a   u   u cuu   c          -         c  a u      cuc 


mirna_id: csi-MIR171b
hairpin:
caggcagagaaagcacuucuuggcgauu         g   u  u                  a   uaauuaau    uc    ----uuc    c 
                            ggagaagua aca gg gugauauugguucggcuc ucu        agau  auau       agcc u
                            ||||||||| ||| || |||||||||||||||||| |||        ||||  ||||       |||| u
                            uuucuucgu ugu uC CACUAUAACUAAGCCGAG aga        ucua  uaug       uugg a
-------------------uuaguuuuc         a   -  U                  C   --------    ua    uacauuc    a 


mirna_id: csi-MIR171a
hairpin:
-uacu    g                   a     a   u      ua 
     cacg gauauuggugcgguucaau agaaa cgg gcucaa  c
     |||| ||||||||||||||||||| ||||| ||| ||||||   
     gugC CUAUAACCGCGCCGAGUUa uuuuu gcc cgaguu  u
ucacc    A                   g     c   u      uu 


mirna_id: csi-MIR172b
hairpin:
uugc       a  a   a           a   --c   -ucuaa     aa   agc    uu 
    ucgcugu gc gcg cgucaagauuc cau   cag      aggca  agc   aauu  u
    ||||||| || ||| ||||||||||| |||   |||      |||||  |||   ||||  c
    agcggcA CG CGU GUAGUUCUAAG gug   guu      uccgu  ucg   uuga  u
aagu       A  G   A           A   acu   uuuggg     --   -gu    cu 


mirna_id: csi-MIR172c
hairpin:
------------   gu    a    g    c           a    c  uu     -uag   -      a   u  u     uuuua 
            acu  uugc guug agca caucaagauuc caaa ua  agggu    uga guggag uaa gg ggcua     u
            |||  |||| |||| |||| ||||||||||| |||| ||  |||||    ||| |||||| ||| || |||||      
            uga  agcg cGAC UCGU GUAGUUCUAAG GUuu gu  ucucg    acu cacuuc guu cc ccggu     u
auauuaaaucgg   au    a    G    A           -    u  -u     uuaa   u      -   -  -     uuuuu 


mirna_id: csi-MIR319
hairpin:
ucgucucuuaauaaaauuggcgaaaau  u    a            g   c        -------guu   ua 
                           gg agaa uagggguuccuu cgg ccaaaaca          ggc  a
                           || |||| |||||||||||| ||| ||||||||          |||  c
                           uc ucuu aUCCUCGAGGGA GUC GGUUUugu          ucg  u
-----------------------uuuc  u    a            A   A        aucucucuuc   uc 


mirna_id: csi-MIR393
hairpin:
------------------------uucu  a  ua     ua      A      C      A      gccuua    uaauu 
                            gc ac  gagga  aAUCCA AGGGAU GCAUUG UCcuaa      auua     c
                            || ||  |||||  |||||| |||||| |||||| ||||||      ||||     c
                            cg ug  uuccu  uuaggu ucccua cguagc aggauu      uaau     c
auacaucucuaauauauauauguauacu  a  gc     cc      c      u      -      -acuua    ucaua 


mirna_id: csi-MIR394
hairpin:
-----cuu  u          -      U C             uccc   c  uu  aucu   a  - uuuuu uu 
        cu acagaguuua UUGGCA U UGUCCACCUCCgu    cau ga  ga    gaa gc c     c  u
        || |||||||||| |||||| | |||||||||||||    ||| ||  ||    ||| || |     |  u
        gg ugucucgagu aaccgu a acggguggaggua    gua cu  cu    cuu cg g     g  c
uucucuuc  u          c      c u             -cuc   -  uu  --cu   -  u uuuuu uu 


mirna_id: csi-MIR395
hairpin:
a  u u  g             u       u     cuauaugaucauu 
 ug c cc ggaguuccuccga cacuuca ugggg             u
 || | || ||||||||||||| ||||||| |||||             a
 ac g gg uCUCAAGGGGGUU GUGAAGU acccc             g
c  c u  g             U       C     acuguuuaaaaca 


mirna_id: csi-MIR396a
hairpin:
------------------------c  --a         u   a c                  C   c   aauuuuccgaucgaua 
                         ga   gguccucuu gug u UUCCACAGCUUUCUUGAA UGu uug                c
                         ||   ||||||||| ||| | |||||||||||||||||| ||| |||                c
                         cu   uuaggagaa cau a aaggugucgaaagaacuu aca aac                g
cuagagauaguuuucucucuaacua  ggu         u   c a                  a   c   ccuuaauuaguacgug 


mirna_id: csi-MIR396b
hairpin:
----------ua   u   c                     C          u  ucuu   au  g    ca 
            uga ccu uuuguauuuUUCCACAGCUUU UUGAACUGca ca    ugc  ga gcca  g
            ||| ||| ||||||||||||||||||||| |||||||||| ||    |||  || ||||   
            acu gga aaacauagaagggugucgaaa aacuuggcgu gu    acg  cu cggu  a
aacuuuaaaaua   u   c                     u          u  --uu   --  a    uc 


mirna_id: csi-MIR397
hairpin:
---------------------------    auu  ---         C                A    uauuu   -g u   uugccaaua 
                           ccag   ga   aaaaaacaU AUUGAGUGCAGCGUUG UGaa     guc  g gcu         u
                           ||||   ||   ||||||||| |||||||||||||||| ||||     |||  | |||         u
                           gguc   cu   uuuuuugua uagcucacgucgcgac acuu     uag  c cga         u
acacgcauaauagaccuauuaggacuu    -gu  cga         c                c    --ucu   ga -   ucauaucuc 


mirna_id: csi-MIR399e
hairpin:
------------------------------------au      ccuucu     C    G  ---    UGCC    cauucac   c     uagu 
                                      uugcau      guuUG CAAA GA   GAAU    CUGc       ucu gcagc    u
                                      ||||||      ||||| |||| ||   ||||    ||||       ||| |||||    g
                                      aaugua      uaaac guuu uu   cuua    gacg       aga cguug    u
guauaacuugagucuuaccauuuacuacuuuagcaaac      ----au     c    g  uaa    cucc    --accuu   a     uuaa 


mirna_id: csi-MIR399c
hairpin:
ucaauacaaagugacaa     uu   -    aa   u     c           u     ---u      -----        g 
                 ugugg  gag gaau  cag gcagu cuccuuuggcg gcaga    ugcaaa     gagauaau c
                 |||||  ||| ||||  ||| ||||| ||||||||||| |||||    ||||||     ||||||||  
                 acgcu  cuc cuua  GUC CGUUA GAGGAAACCGU ugucu    acguuu     cuuuauua a
------------gaucg     --   a    cc   C     A           u     uccu      acuua        u 


mirna_id: csi-MIR399d
hairpin:
a        u       c     ac        -  a   u    uauuggugcaauaaucagca 
 aagcaguu uagggca cucuu  uuggcaug ca ugg gauu                    u
 |||||||| ||||||| |||||  |||||||| || ||| ||||                     
 uucgucag GUCCCGU GAGAG  AACCGUau gu acc cuaa                    u
c        u       U     GA        a  c   -    cuauagcuuaauugguuaua 


mirna_id: csi-MIR399a
hairpin:
cauugaggugcaugcaugcaguugcauauuaca      c      a        cu       u   acauccaucu     a 
                                 gggcaa aucucc uuggcagg  gcauacu auu          cauau u
                                 |||||| |||||| ||||||||  ||||||| |||          |||||  
                                 CCCGUU UAGAGG AACCGUcu  cguguga uga          guaug a
----------uuuuauuuacgucuccuuaacGG      -      A        uc       c   ----cuucuu     c 


mirna_id: csi-MIR399b
hairpin:
gaagcagu    -  uu            uu                g  ggccaagggcaaagaucauauaauauauauuua 
        aagc ga  uaguuguagggc  cucuccuuuggcaggu au                                 u
        |||| ||  ||||||||||||  |||||||||||||||| ||                                 a
        uucg cu  gucaauAUCCCG  GAGAGGAAACCGUcca ua                                 u
aauaaauu    a  uc            UU                g  acuuuuuuaucuuguuauuaaucuuauccgugg 


mirna_id: csi-MIR403
hairpin:
g         u                       aaa a  c  uucuuuuaaucucguuccccc 
 aggcauguu cggguuugugcgugaauuuaaua   u ac gc                     a
 ||||||||| |||||||||||||||||||||||   | || ||                     u
 ucuguguag GCUCAAACACGCACUUAGAUUgu   a ug cg                     u
-         u                       --g c  c  uuuuuaaacaaugauuguuuu 


mirna_id: csi-MIR408
hairpin:
agguaauaauaacucuuuggugugugcgugagagaga  c   aa   a    caaaaga       c      a      au   a   uu     g 
                                     gg aag  gca gaga       cggggaa aggcag gcaugg  gga cca  aacag u
                                     || |||  ||| ||||       ||||||| |||||| ||||||  ||| |||  ||||| u
                                     cc uuc  cgu cucu       GUCCCUU UCCGUC CGUAcc  ccu ggu  uuguc c
------------------------------------u  -   --   -    -----CG       C      A      cu   c   -u     u 


mirna_id: csi-MIR472
hairpin:
g           a      u a  -        u   aa      uc 
 ggaagucuugg gauggg g gu ugggaaaa aau  cuuucu  a
 ||||||||||| |||||| | || |||||||| |||  ||||||  c
 cuuuuagaauC CUACCC C CA ACCCUUUU uua  gaaaga  g
-           C      U -  C        u   ac      ca 


mirna_id: csi-MIR473
hairpin:
--------------------------------------ccaaagcaguaga    u      UC              C  -       aa    g  g 
                                                   gucg ucACUC  CCUCAAGGGCUUCG ca caaucca  ucau cu a
                                                   |||| ||||||  |||||||||||||| || |||||||  |||| ||  
                                                   cagc agugag  gggguuccugaagu gu guugggu  ggug ga a
aucggaagcucaacagaagacgcuagcaguaaucgcucaauuuuuuguccg    u      uu              c  a       -g    -  c 


mirna_id: csi-MIR477a
hairpin:
----------------a        ----      c           GAA  C         -a        ------  uc 
                 aaauggag    aagcuu caACCUCCCUC   GG UUCCAAuau  ccaugcuu      cc  a
                 ||||||||    |||||| |||||||||||   || |||||||||  ||||||||      ||  n
                 uuuaccuc    uucgaa guuggaggggg   cc aagguugua  gguacgaa      gg  a
gugcaugucugacuaaa        agua      a           auc  a         ag        uguucc  uu 


mirna_id: csi-MIR477b
hairpin:
--------ca     aauc    u       -    C         -U U         auauaacg   auau    a 
          aaagc    gucg ucaCUCU CCCU AAGGGCUUC  C ucgauccau        uac    gcuc a
          |||||    |||| ||||||| |||| |||||||||  | |||||||||        |||    ||||  
          uuucg    cagc agugaga ggga uucccgaag  g agcuaggua        gug    ugag a
ccuuuuacuc     gccu    u       c    -         uc c         --------   ---g    u 


mirna_id: csi-MIR477c
hairpin:
-----------------        ----      c           GAA  C         -A        ------  uc 
                 aaauggag    aagcuu caaccUCCCUC   GG UUCCAAUAU  ccaugcuu      cc  a
                 ||||||||    |||||| |||||||||||   || |||||||||  ||||||||      ||  n
                 uuuaccuc    uucgaa guuggaggggg   cc aagguugua  gguacgaa      gg  a
gugcaugucugacuaaa        agua      a           auc  a         ag        uguucc  uu 


mirna_id: csi-MIR479
hairpin:
-------------auu         g   u  U                  A   uaauuaau    uc    ----uuc    c 
                ggagaagua aca gg GUGAUAUUGGUUCGGCUC UCu        agau  auau       agcc u
                ||||||||| ||| || |||||||||||||||||| |||        ||||  ||||       |||| u
                uuucuucgu ugu uc cacuauaacuaagccgag aga        ucua  uaug       uugg a
ccacguuuuaguuuuc         a   -  u                  c   --------    ua    uacauuc    a 


mirna_id: csi-MIR482a
hairpin:
a       u            -       U      agaagaaagcguauaauuuuucuuuucuu 
 ggaaguu ugggAGUGGGAG CGUGGGG AAGAAG                             u
 ||||||| |||||||||||| ||||||| ||||||                              
 ccuuuag auCCUUACCCUC GUAUCCC UUCUuu                             u
-       u            C       -      aacuuaaacauuaaaagaaagaguuaacu 


mirna_id: csi-MIR482b
hairpin:
a        cu           -cuu         cgaucua        guuc 
 ggaaauuu  ggaaugggagg    ggcaagaag       uuuuucuu    a
 ||||||||  |||||||||||    |||||||||       ||||||||    a
 ccuuuagg  CCUUACCCUCC    CCGUUCUuu       aaaaagaa    u
-        uu           CCAC         uuaaaag        aaaa 


mirna_id: csi-MIR530a
hairpin:
    cgaga   u       U    C         G u     guua  u    --   c aa      c 
ggca     uuu ucUGCAU UGCA CUGCACCUU c gugcu    uc gggu  uga g  gaucau a
||||     ||| ||||||| |||| ||||||||| | |||||    || ||||  ||| |  ||||||  
ccgu     aag ggacgua augu gacguggaa g uacga    ag cuca  acu c  cuagua u
    -----   u       u    c         - -     ---a  -    aa   u ga      g 


mirna_id: csi-MIR530b
hairpin:
aucc                C          u     uaucugguucugguucguaaaagccaaagcacaagaaga 
    uuuaucUGCAUUUGCA CUGCAUCUUG ugcgu                                       g
    |||||||||||||||| |||||||||| |||||                                        
    aaguagacgugaacgu gacguggaac acgua                                       c
ccgu                u          u     uauugggguacgacggugguauagacggcugccgauaac 


mirna_id: csi-MIR535
hairpin:
auuuuuucuaaugaacauucuuug     a  uuuu     u uau    a      ug --g      uauaauc    ccc 
                        uugca gg    cugau g   uguu cuuuuu  u   cagaua       cuug   a
                        ||||| ||    ||||| |   |||| ||||||  |   ||||||       ||||    
                        aacgu cu    gacug c   ACGA GAGAGA  A   GUuugu       gaac   a
-----------------------a     g  -uac     c CAC    -      GU ACA      uucaaca    uca 


mirna_id: csi-MIR827
hairpin:
-------------------- c        u             --uu  uuu    uccg 
                    g uuguugau gucaucuaaucau    uc   uuca    g
                    | |||||||| |||||||||||||    ||   ||||     
                    C AACAACUA CAGUAGAUUggua    ag   aagu    g
cguacgguaugguacuuauA A        C             uauu  --u    uuac 


mirna_id: csi-MIR857
hairpin:
auguugaaaauugauuaaaaaaaaaaagguugaaaag    --a    a  a   a   ug -       -   gagg     gaga     g  aa 
                                     ucaa   uuag ag cau guu  a auucaaa ugg    uggcc    acuuu aa  g
                                     ||||   |||| || ||| |||  | ||||||| |||    |||||    ||||| ||   
                                     aguu   aguU UC GUG UAA  U UAAGUUU auc    accgg    ugaag uu  u
-----------------------------------aa    gua    A  G   G   GU G       U   -aaa     ----     g  aa 


mirna_id: csi-MIR3947
hairpin:
aauuagauucaagguuuuuaaguuuuguuaucacuucuuacuauuaaaaauaaca   g   a   au   aug      ugaauu     uacuuu      cu 
                                                       aau aug gau  guu   cuacug      aaaug      uuaaga  u
                                                       ||| ||| |||  |||   ||||||      |||||      ||||||  a
                                                       uua uAC CUG  CAG   GAUGAC      UUUAU      aauucu  a
----------------------------------------uauuuucuuauaaga   g   A   --   -CA      ------     -Ucuuc      ca 


mirna_id: csi-MIR3948
hairpin:
------------------------------------------------------ag   u UG      --      GAG      --Guuuacu   a   a  g 
                                                        gag g  GAGUGG  GAGUGG   UAGGGU         uag cua au a
                                                        ||| |  ||||||  ||||||   ||||||         ||| ||| ||  
                                                        uuc u  uucauu  uuuauu   auccua         auu ggu ug a
aauauuaaaacauguauuccuauuuuaauauuaaauuuuauuaaaugaggguuagg   - gu      ug      --a      agacuaacu   a   a  a 


mirna_id: csi-MIR1515
hairpin:
-      ug -------              C        c  auuug    c   cu   cuuucuuuuuaauuuacaaauauucauguuua 
 ucgauu  c       aUCAUUUUUGCGUG AAUGAUCC ga     cucu uua  caa                                u
 ||||||  |       |||||||||||||| |||||||| ||     |||| |||  |||                                u
 gguuga  g       uaguaaaaacgcac uuacuagg cu     gggg aau  guu                                g
c      gu cucaguu              -        u  ----a    c   -u   uuuaaucuuaaaaaaaaaggauaaaaaguuug 


mirna_id: csi-MIR3949
hairpin:
u        caugg     caag     a   - u         cuuggggcaacguuucuagu 
 guuauggc     ccugc    uuugc uca c ucaaggcuu                    u
 ||||||||     |||||    ||||| ||| | |||||||||                    a
 uaauaucg     gGAUG    AAACG AGU G AGUuuugaa                    a
-        ----a     -UAA     G   U U         caaguaaaaagacuuugaga 


mirna_id: csi-MIR3950
hairpin:
-------------------------aaaacc       U    C  CA        uagu     -  aaaauuuacuuuuugugccaacag 
                               caauUUU UCGG AA  UGAUUUCU    agaaa cc                        g
                               ||||||| |||| ||  ||||||||    ||||| ||                         
                               guuagaa aguu uu  acugaaga    ucuuu gg                        a
uuugaaccacaaagggugguugcuacuacua       c    -  aa        -uuu     a  caaacguauuuaagaauaauauuu 


mirna_id: csi-MIR3951
hairpin:
-cau            u           A             uau        -  c      aauuuguucccu 
    aagaggagugcu ggcaUAGAUAA GAUGAGAGAAAAA   gagagaag ga gagaga            c
    |||||||||||| ||||||||||| |||||||||||||   |||||||| || ||||||             
    uucuuuuuacga ucgugucuauu cuauucucuuuuu   uucuuuuc cu cucucu            u
uagc            u           g             --c        u  u      cacccacccacc 


mirna_id: csi-MIR396c
hairpin:
cc      g           c              uucuuucuucuucuucuucuucuucuucuucuucuucuucuucuucuucuucu 
  ugucau uuuuuccacag uuucuugaacuucu                                                     u
  |||||| ||||||||||| ||||||||||||||                                                      
  acggua aGAAGGGUGUC AAAGAACUUgaaga                                                     c
aa      a           U              uuaucgacgucgaucgguguaguuuagcaucggauaauaaucuccuucuucuu 


mirna_id: csi-MIR3952
hairpin:
uauuc     u     g    u            cuc      c   ccauggacugggagcgaaggaagugggaucugau 
     uuuca gugcu uaga aggcccuucaac   ggaaac uca                                  g
     ||||| ||||| |||| ||||||||||||   |||||| |||                                   
     aaggu CACGA AUCU UCCGGGAAGUug   cuuuug agu                                  g
uaccu     -     G    U            aaa      c   agaaagaaaacgucgaacgguggauguuacgguu 


mirna_id: csi-MIR482c
hairpin:
u      uuu     -u   ug            ----uu   -    uu 
 aaaauu   ggaau  ggg  cuagggaagguu      guu ugac  g
 ||||||   |||||  |||  ||||||||||||      ||| ||||   
 uuuuag   CCUUA  CCC  GAUCCCUUuuaa      caa acug  u
c      uAU     UC   CU            uuaaau   u    uc 


mirna_id: csi-MIR3953
hairpin:
u  --au  uc     a  -       c   acaga    ucauucc u  au 
 gg    aa  ugaug cu gcagagc cag     ggcg       g gc  c
 ||    ||  ||||| || ||||||| |||     ||||       | ||   
 cc    uu  GCUGC GA CGUCUUG GUU     cugc       c cg  a
u  gucu  gA     C  A       A   ---ag    cccacua -  au 


mirna_id: csi-MIR3954
hairpin:
-    c  g  UG  --C   -       -     Aa  c    cu 
 uuua uu gc  GA   AGA GAAAUCA CGGUC  gu ucuu  u
 |||| || ||  ||   ||| ||||||| |||||  || ||||  g
 aggu ag ug  cu   ucu cuuuagu guuag  ca agga  u
a    -  g  gu  acu   u       a     --  a    cu 


mirna_id: csi-MIR167a
hairpin:
  -    g      u            C        aa        -  ccu 
gc acua uaguag UGAAGCUGCCAG AUGAUCUG  cuuuccuu ga   c
|| |||| |||||| |||||||||||| ||||||||  |||||||| ||    
cg uggu guuauc acuuugacgguc uacuagac  gaaaggga cu   c
  a    a      c            -        cg        u  cua 


mirna_id: hvu-MIR1120
hairpin:
cu     c   u       -               a        
  acucc ucc ucccaua uauaagaguguuuuu auacuac 
  ||||| ||| ||||||| ||||||||||||||| |||||| a
  ugagG AGG AGGGUAU AUAUUCUUACAaaaa ugugauc 
-u     -   C       U               g        


mirna_id: hvu-MIR166b
hairpin:
        uu                aa    g   ggaauggcggauuc 
ggggaaug  gucugguccgagaccu  cacc ggc              a
||||||||  ||||||||||||||||  |||| |||               
CCCCUUAC  CGGACCAGGCUuuggg  gugg ucg              g
        UU                gg    a   aacgaaucgacguc 


mirna_id: hvu-MIR1436
hairpin:
ggcuucccuguauacagacagaguca          -----           cg     
                          uacucccucc     auaauguagua  guuu 
                          ||||||||||     |||||||||||  ||| u
                          aUGAGGGAGG     UAUUACAucau  cagu 
---------------------guuac          CAGGG           ca     


mirna_id: hvu-MIR444a
hairpin:
     -     ---   a  c    ---  u  c      c   a     aauuaauaga 
aggca caagu   agg ca caac   au ac ugcaag aag cgcaa          a
||||| |||||   ||| || ||||   || || |||||| ||| |||||           
ucCGU GUUCG   UCC GU GUUg   ug ug acguuc uuc guguu          c
     C     AAC   -  C    acg  c  a      u   g     cauaccacua 


mirna_id: hsa-mir-548o-2
hairpin:
u                       U   --    a 
 ggugcAAAAGUAAUUGCGGUUUU GCC  auua a
 ||||||||||||||||||||||| |||  ||||  
 ccaCGUUUUCAUUGACGUCAAAA Cgg  uaau a
c                       C   cg    g 


mirna_id: hsa-mir-1254-2
hairpin:
cugA   UG AA       CC     U ag uau 
    GCC  G  GCUGGAG  UGCAG g  c   g
    |||  |  |||||||  ||||| |  |   a
    cgg  c  cgaucuc  auguc c  g   u
---a   gu --       --     - cu uac 


mirna_id: hsa-mir-1268b
hairpin:
a    ---   G   UGG  G    G 
 ccCG   GGC UGG   UG GGGU g
 ||||   ||| |||   || ||||  
 gggu   ucg acc   au uccg g
a    uga   -   uua  g    u 


mirna_id: hsa-mir-378d-1
hairpin:
a         --   uu    uu  ug 
 cuguuucug  ucc  guuc  gu  u
 |||||||||  |||  ||||  ||  u
 gacAAAGAC  AGG  CAGG  CA  a
g         UG   UU    -U  uu 


mirna_id: hsa-mir-378e
hairpin:
-----          u      --gccag     gaca  gga 
     cugacuccag guccag       gggca    gu   c
     |||||||||| ||||||       |||||    ||   a
     GACUGAGGUU CAGGUC       cccgu    ca   g
uacAG          -      Accagaa     --ga  aga 


mirna_id: hsa-mir-548h-5
hairpin:
a            C        U  -   c 
 cAAAAGUAAUCG GGUUUUUG Ca uua u
 |||||||||||| |||||||| || |||  
 guuuucguuggc ccaaaaau gu aau u
c            a        -  c   u 


mirna_id: hsa-mir-548ab
hairpin:
au            G         A      U     uu  a 
  guuggugcAAAA UAAUUGUGG UUUUGC auuac  gu u
  |||||||||||| ||||||||| |||||| |||||  ||  
  caaccacguuuu auuaacgcc aaaacg uaaug  ua u
-c            g         c      -     uu  u 


mirna_id: hsa-mir-4417
hairpin:
ga    -aacc        UU  C   -----    -  a 
  aaac     aGGUGGGC  CC GGA     GGGc gg a
  ||||     ||||||||  || |||     |||| || c
  uuug     uccacucg  gg ccu     cccg cc a
-g    cacca        --  a   acgac    a  c 


mirna_id: hsa-mir-4418
hairpin:
u          cu    ga  - ug   gu g 
 gguuuuugcu  gagu  cc g  gug  u u
 ||||||||||  ||||  || |  |||  | g
 uuaagGACGA  CUCA  GG C  CAC  a g
c          --    --  A GU   ug g 


mirna_id: hsa-mir-4419a
hairpin:
u         u    ---------        ag  a     g 
 gguggugug gccu         guagucuu  cu cucgg a
 ||||||||| ||||         ||||||||  || |||||  
 ucaccgcac ugga         CGUCAGAG  GG GAGUc g
g         -    ggugagugA        GA  -     g 


mirna_id: hsa-mir-378f
hairpin:
g     u --    a    cau    uu   -   gcuaaac 
 ucagg c  cugg cucc   aguu  cag gcu       a
 ||||| |  |||| ||||   ||||  ||| |||        
 gguuc G  GACC GAGG   UCAG  GUC cga       a
g     u AA    -    --U    --   A   gcaagac 


mirna_id: hsa-mir-4420
hairpin:
c   ug  -  ga     ugu   -   a      u   u 
 ucu  gu au  acauc   gug uuc ugucuc cug g
 |||  || ||  |||||   ||| ||| |||||| |||  
 aGA  CG UG  UGUAG   CAC Gag gcaggg gac c
c   GU  A  UC     --U   U   a      -   a 


mirna_id: hsa-mir-4421
hairpin:
c     --        ug u  g  -   aa a u 
 ugggu  cuccuuuc  c ga ag uug  c c u
 |||||  ||||||||  | || || |||  | | g
 auccA  GAGGAAAG  G CU UC Aac  g g u
c     UC        GU U  G  C   ag - u 


mirna_id: hsa-mir-4422
hairpin:
a            a   A            UA     cau 
 guucuucugcag cAA AGCAUCAGGAAG  CCCAc   g
 |||||||||||| ||| ||||||||||||  |||||   u
 cgaggagacguu guu ucguaguucuuc  gggug   a
c            a   c            cc     acc 


mirna_id: hsa-mir-4423
hairpin:
a          cA     C      -UU  C      uuu 
 ucauguacug  GUUGC UUUUUG   CC AUGCug   a
 ||||||||||  ||||| ||||||   || ||||||    
 aguguaugac  CAACG AAAAAC   GG UAcgau   a
a          AA     -      CAC  A      ccg 


mirna_id: hsa-mir-378g
hairpin:
-cA       U        A 
   CUGGGCU GGAGUCAG A
   ||||||| |||||||| G
   gacccga ccucgguc a
cuc       -        c 


mirna_id: hsa-mir-548ac
hairpin:
g                    u     -             uu 
 uauuagguuggugcaaaagu auugu gguuuuugcuauu  u
 |||||||||||||||||||| ||||| |||||||||||||  u
 augauccaaucacGUUUUCA UAACG CCAAAAACgguaa  u
g                    U     G             uu 


mirna_id: hsa-mir-4424
hairpin:
c                       CA             uuu 
 uuacaucacacacAGAGUUAACU  AAAUGGACUAauu   c
 |||||||||||||||||||||||  |||||||||||||    
 gauguagugugugucucaauuga  uuuaccugauuga   c
u                       ac             uca 


mirna_id: hsa-mir-4425
hairpin:
g                   ca               uuug 
 ugcuuuacaugaauggucc  uugaaucccaacagc    c
 |||||||||||||||||||  |||||||||||||||     
 augaaaugugcuUACCAGG  GACUUAGGGUUGUug    g
a                   AC               ugaa 


mirna_id: hsa-mir-4426
hairpin:
-aguug     -     GUA    gucugacu 
      GAAGA UGGAC   CUUU        a
      ||||| |||||   ||||         
      cuucu aucug   gaaa        c
guucua     c     -ag    acuuauaa 


mirna_id: hsa-mir-4427
hairpin:
    c     g      -        --        
gaag cucuu gggcuu auuuagac  aaugguu 
|||| ||||| |||||| ||||||||  |||||| u
uuuc GAGAA UCUGAG UAAGUCUg  uuacuac 
    U     G      A        cu        


mirna_id: hsa-mir-4428
hairpin:
u    a   g       g    -      a   ua a 
 uggc ggu ccauguu ccug cuccuu cug  c c
 |||| ||| ||||||| |||| |||||| |||  |  
 accg cCG GGUACAA GGGC GAGGAA ggu  g g
u    -   A       -    A      C   cg u 


mirna_id: hsa-mir-4429
hairpin:
a   -agAAA  -     -CU         - ug  g 
 ggg      AG CUGGG   GAGAGGCGa c  gu u
 |||      || |||||   ||||||||| |  || c
 ccc      uc gacuc   cucucuguu g  ua u
a   gguccg  a     aac         u uu  a 


mirna_id: hsa-mir-4430
hairpin:
--g g   C       -  C  AGa 
   u AGG UGGAGUG AG GG   u
   | ||| ||||||| || ||    
   g ucc accucac uc cc   c
agu g   a       g  a  aug 


mirna_id: hsa-mir-548ad
hairpin:
c                    a     g       -a     
 uguuagguuggugcaaaagu auugu guuuuug  aagu 
 |||||||||||||||||||| ||||| |||||||  ||| a
 auaaucuaaccACGUUUUCA UAACA CAAAAGc  uuca 
c                    G     G       gg     


mirna_id: hsa-mir-4431
hairpin:
u    uGC        A              ugac        ucu 
 gguu   GACUCUGA AACUAGAAGGUuua    ugggcauu   c
 ||||   |||||||| ||||||||||||||    ||||||||    
 ccaa   cugagacu uugaucuuucaagu    acccguaa   a
c    uua        g              uaua        ccc 


mirna_id: hsa-mir-4432
hairpin:
--             c g      u c    cc     a u u 
  gcaucuugcagag c uuccaa g gaca  ucuag g g c
  ||||||||||||| | |||||| | ||||  ||||| | |  
  CGUAGAACGUCUC G AAgguu c cugu  agauc c c a
UC             A A      c a    -a     c - u 


mirna_id: hsa-mir-4433
hairpin:
c          C           C         uc   uga 
 auccuccuua GUCCCACCCCC ACUCCUGUu  ugg   a
 |||||||||| ||||||||||| |||||||||  |||    
 uaggaggaaU CAGGGUGGGGG UGAGGACAa  acu   a
a          A           -         --   uau 


mirna_id: hsa-mir-4434
hairpin:
u    u          AAA U     u 
 cacu uAGGAGAAGU   G AGAAc u
 |||| ||||||||||   | |||||  
 guga auccuuuuca   c uuuug u
u    c          --a -     g 


mirna_id: hsa-mir-4435-1
hairpin:
a    gcaaA     ---A   C      AGA   a    u 
 ggca     UGGCC    GAG UCACAC   GGg ugag g
 ||||     |||||    ||| ||||||   ||| |||| c
 ucgu     accgg    cuc agugug   ucc acuu a
a    agaca     acga   -      acg   -    c 


mirna_id: hsa-mir-4436a
hairpin:
g        u       a      c       cuc     ugc 
 ccucacuu uccacuu ugccug ccugccc   gaauc   u
 |||||||| ||||||| |||||| |||||||   |||||    
 ggagugaa AGGUGAA ACGGAC GGACGgg   uuuag   c
a        U       G      A       ---     cac 


mirna_id: hsa-mir-4435-2
hairpin:
-   ---aA     ---A   C      AGA   a    u 
 gca     UGGCC    GAG UCACAC   GGg ugag g
 |||     |||||    ||| ||||||   ||| |||| c
 cgu     accgg    cuc agugug   ucc acuu a
u   agaca     acga   -      acg   -    c 


mirna_id: hsa-mir-4437
hairpin:
--a        a              a gg 
   cuuugugc uuggguccacaagg g  g
   |||||||| |||||||||||||| |  a
   GAAACAUG GACUCGGGUguucc c  u
UUG        G              - ag 


mirna_id: hsa-mir-548ae-1
hairpin:
    uuuuugccauua                  u 
gcag            aguugcgguuuuugccau a
||||            ||||||||||||||||||  
cguc            UUAACGUCAAAAACggua u
    --cacACUUUCA                  a 


mirna_id: hsa-mir-548ae-2
hairpin:
u   ca          ug            ua 
 gug  aaaguaauug  guuuuugucauu  a
 |||  ||||||||||  ||||||||||||  a
 cac  UUUCAUUAAC  CAAAAACgguaa  a
c   AC          GU            ug 


mirna_id: hsa-mir-4438
hairpin:
u                                       uugcc 
 aaguguaaacuuaaggacugucuuuucuaagccugugcc     u
 |||||||||||||||||||||||||||||||||||||||     u
 uucacauuugaauuucUGACAGAAAAGAUUCGGACACgg     u
c                                       uuucc 


mirna_id: hsa-mir-4439
hairpin:
---  -a    -                    ----------      
   cc  GUGA CUGAUACCUUGGAGGCAUuu          uaucu 
   ||  |||| ||||||||||||||||||||          |||| a
   gg  cauu gacuauggaaucuccguaaa          auaga 
acc  ac    u                    cgaaacacac      


mirna_id: hsa-mir-4440
hairpin:
c   -   caa      g   ug  g  ug -ug      acc    cu 
 ucu cac   gcaagu cag  gg cu  c   gcuugc   guga  c
 ||| |||   |||||| |||  || ||  |   ||||||   ||||  c
 aga gug   cGUUCG GUC  UC GG  G   Ugaacg   cacu  c
u   a   uca      -   GU  G  GU CUG      aac    cu 


mirna_id: hsa-mir-4441
hairpin:
-c g          g      g          g ------     a a   ag 
  a agucuccuuc uguaca ggaggagacu u      acgug g gau  u
  | |||||||||| |||||| |||||||||| |      ||||| | |||   
  U UUAGAGGAGG ACAugu cuuccucuga a      uguac c cua  c
cA G          G      g          g cgagau     g -   ga 


mirna_id: hsa-mir-4442
hairpin:
gcgc         cucc        -  aa   gu 
    ccucccucu    ccggugug ca  ugu  g
    |||||||||    |||||||| ||  |||   
    GGAGGGAGA    GGCCGuau gu  gcg  u
--gu         -ACA        u  -g   ug 


mirna_id: hsa-mir-4443
hairpin:
- g g         --  C       U 
 g u ggggUUGGA  GG GUGGGUU U
 | | |||||||||  || |||||||  
 c a ucccgaucu  cc uauccaa a
a g g         uu  c       g 


mirna_id: hsa-mir-4444-1
hairpin:
-g   c      c c          -u    -  c ca 
  uga gacugg c cgccucuucc  cucg gu c  u
  ||| |||||| | ||||||||||  |||| || |   
  acu cuggcc g GCGGAGAAGG  GAGC Ca g  a
aa   -      u a          UU    U  a uu 


mirna_id: hsa-mir-4445
hairpin:
u    gcA                       uuu 
 uccu   GAUUGUUUCUUUUGCCGUGCAag   a
 ||||   |||||||||||||||||||||||    
 ggga   CUAACAAAGAAAACGGCACguuu   a
u    gAC                       uug 


mirna_id: hsa-mir-4446
hairpin:
c  gu    U  C      UUC      Cuuca 
 ug  ccAU UC CUGCCA   CCUUGG     a
 ||  |||| || ||||||   ||||||     u
 ac  GGUA AG GACGGU   GGGACc     u
a  UG    C  U      --C      cucau 


mirna_id: hsa-mir-4447
hairpin:
      ------     -    uu u      uu   -c  -     ac 
guucua      gagca uggu  c caucau  gca  ua cugau  u
||||||      ||||| ||||  | ||||||  |||  || |||||  u
uaggau      UUUGU GUCG  G GUGGug  ugu  au gacug  g
      guuacg     U    GG -      uu   ua  a     gg 


mirna_id: hsa-mir-4448
hairpin:
a  agug   aaa    aa   ugc         auuau    a 
 gg    acc   agac  gag   gagccuucu     gccc g
 ||    |||   ||||  |||   |||||||||     |||| a
 cc    UGG   UCUG  UUC   CUCGGgaga     cggg c
a  guaA   GGA    -G   ---         -ccac    a 


mirna_id: hsa-mir-4449
hairpin:
a  --agc     -       gg          g 
 gc     ccucg gcggccc  ggggcgggcg c
 ||     ||||| |||||||  ||||||||||  
 cg     GGAGC CGUCGGG  CCCUGCccgu g
g  gacAC     G       -G          g 


mirna_id: hsa-mir-548ag-1
hairpin:
--            U      UUC    u   a 
  gugcAAAGGUAA UGUGGU   UGCu uua a
  |||||||||||| ||||||   |||| |||  
  cacguuuucauu acauua   acgg aau g
ac            u      uaa    u   g 


mirna_id: hsa-mir-548ag-2
hairpin:
--              U    UC    a   a 
  ugcAAAGGUAAUUG GGUU  UGCc uug a
  |||||||||||||| ||||  |||| |||  
  acguuuccauuaac ccaa  acgg aau a
cg              u    ga    a   g 


mirna_id: hsa-mir-4450
hairpin:
u   U      UU  A  AG     Ag  cag 
 guc GGGGAU  GG GA  UGGUG  cg   g
 ||| ||||||  || ||  |||||  ||    
 cgg ucccug  cc cu  accac  gu   u
u   u      gu  c  cu     -g  uuc 


mirna_id: hsa-mir-548ah
hairpin:
a                        G    c  a  a 
 gguuggugcAAAAGUGAUUGCAGU UUUG ca ua a
 |||||||||||||||||||||||| |||| || ||  
 ccgaccaCGUUUUCAUUGACGUCA AAAC gu au a
c                        A    a  a  g 


mirna_id: hsa-mir-4451
hairpin:
u    a             cc   cc   cacu 
 cugu ccucagcuuugcu  caa  aac    u
 |||| |||||||||||||  |||  |||    c
 gACA GGAGUCGAGAUGG  guu  uug    c
c    -             Uc   --   uaca 


mirna_id: hsa-mir-4452
hairpin:
u                     g         a u 
 ggaucacuugaggccaagagu caaggcugu g g
 ||||||||||||||||||||| ||||||||| |  
 ccUAGUGAAUUCCGGUUCUUA GUUccgaca c u
c                     A         - g 


mirna_id: hsa-mir-4453
hairpin:
--      -  UU      UAGC          -----------       gu 
  uggaGA GC  GGUCUG    GGUUuccuuc           ggggcag  g
  |||||| ||  ||||||    ||||||||||           |||||||  g
  acuucu cg  ccggac    ccggaggagg           ccucguc  g
gg      g  --      ----          aaggaggguuu       ag 


mirna_id: hsa-mir-4454
hairpin:
--cc  A  - GAGU     -   -  aa 
    GG UC C    CACGG CAC CA  u
    || || |    ||||| ||| ||  u
    cc ag g    gugcc gug gu  u
acca  -  a aagu     u   c  ac 


mirna_id: hsa-mir-4455
hairpin:
a       G  UG          gagaa 
 gaAGGGU UG  UGUUUUUccu     u
 ||||||| ||  ||||||||||      
 cuucuua ac  acaggaagga     a
a       a  cg          agaga 


mirna_id: hsa-mir-4456
hairpin:
a       GG           U 
 ugaaCCU  UGGCUUCCUUU c
 |||||||  |||||||||||  
 acuuggg  auugaaggagg u
-       --           g 


mirna_id: hsa-mir-4457
hairpin:
g      u            g        a  a 
 gaguac ccagucaauacc ugugaguu ga a
 |||||| |||||||||||| |||||||| || a
 cuuAUG GGUCAGUUAUGG ACACUuaa cu g
a      C            A        -  c 


mirna_id: hsa-mir-4458
hairpin:
g       AGA     -      -A    ag     c 
 agcgcac   GGUAG GUGUGG  AGAA  ugaaa a
 |||||||   ||||| ||||||  ||||  ||||| c
 ucgugug   ucguc cacauu  uuuu  auuuu u
g       gug     u      ga    gg     a 


mirna_id: hsa-mir-4459
hairpin:
a      AGGC    GA    --GA    ---  a 
 cCCAGG    GGAG  GGUG    Gguu   gc g
 ||||||    ||||  ||||    ||||   || u
 gggucc    ccuc  ucac    cuag   cg g
g      --ga    ag    ggug    aac  a 


mirna_id: hsa-mir-4460
hairpin:
gu                                 -cc  uuu 
  uuuuugcccAUAGUGGUUGUGAAUUUACCUUcu   uc   g
  |||||||||||||||||||||||||||||||||   ||    
  aaagacgggugucaccaacacuuaaauggagga   ag   c
-c                                 aau  uga 


mirna_id: hsa-mir-4461
hairpin:
g           guua g   g      ---agg   ua 
 aguaggcuuag    u uac uagucu      cca  c
 |||||||||||    | ||| ||||||      |||  g
 ucaucCGGAUC    G AUG AUCAGA      ggu  u
g           ---G G   -      GUUAGa   ug 


mirna_id: hsa-mir-378h
hairpin:
a   gaac     A  UG U       -------    ---u    c 
 cag    ACUGG CU  G GUCAGAU       GGga    gagc c
 |||    ||||| ||  | |||||||       ||||    ||||  
 guc    ugauc ga  u uagucua       uccu    cucg u
g   --ac     -  gu c       acgacga    uugu    g 


mirna_id: hsa-mir-3135b
hairpin:
u       CU  AG    --        U  -  uc 
 gcccaGG  GG  CGAG  UGCAGUGG Gc ag  a
 |||||||  ||  ||||  |||||||| || ||   
 cgggucc  uc  gcuc  acgucacu cg uc  g
u       --  aa    cg        -  a  cu 


mirna_id: hsa-mir-4462
hairpin:
c      -  ug    --aa        u 
 uuccca gc  cccu    gucaggag g
 |||||| ||  ||||    |||||||| g
 AAGGGU CG  GGGA    CAGUccuu c
a      U  GU    GGCA        u 


mirna_id: hsa-mir-4463
hairpin:
aa      -auu    a     u        uga 
  uagauu    gguc ccacc ccaguuuc   a
  ||||||    |||| ||||| ||||||||   u
  guuuaa    CCGG GGUGG GGUCAGAG   u
-c      gagu    -     -        ugu 


mirna_id: hsa-mir-4464
hairpin:
g   cc                 G                  acag 
 gaa  uuaguAAGGUUUGGAUA AUGCAAUAaaguaugucc    c
 |||  ||||||||||||||||| ||||||||||||||||||     
 cuu  aaucauuccaaaccuau uacguuauuucauacagg    u
a   --                 g                  aaag 


