Affymetrix mogene11 annotation data (chip mogene11sttranscriptcluster)

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Documentation for package ‘mogene11sttranscriptcluster.db’ version 8.4.0

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mogene11sttranscriptcluster Bioconductor annotation data package
mogene11sttranscriptcluster.db Bioconductor annotation data package
mogene11sttranscriptclusterACCNUM Map Manufacturer identifiers to Accession Numbers
mogene11sttranscriptclusterALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
mogene11sttranscriptclusterCHR Map Manufacturer IDs to Chromosomes
mogene11sttranscriptclusterCHRLENGTHS A named vector for the length of each of the chromosomes
mogene11sttranscriptclusterCHRLOC Map Manufacturer IDs to Chromosomal Location
mogene11sttranscriptclusterCHRLOCEND Map Manufacturer IDs to Chromosomal Location
mogene11sttranscriptclusterENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
mogene11sttranscriptclusterENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
mogene11sttranscriptclusterENTREZID Map between Manufacturer Identifiers and Entrez Gene
mogene11sttranscriptclusterENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
mogene11sttranscriptclusterENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
mogene11sttranscriptclusterGENENAME Map between Manufacturer IDs and Genes
mogene11sttranscriptclusterGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
mogene11sttranscriptclusterGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
mogene11sttranscriptclusterGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
mogene11sttranscriptclusterLOCUSID Map between Manufacturer Identifiers and Entrez Gene
mogene11sttranscriptclusterMAPCOUNTS Number of mapped keys for the maps in package mogene11sttranscriptcluster.db
mogene11sttranscriptclusterMGI Map MGI gene accession numbers with manufacturer identifiers
mogene11sttranscriptclusterMGI2PROBE Map MGI gene accession numbers with manufacturer identifiers
mogene11sttranscriptclusterORGANISM The Organism information for mogene11sttranscriptcluster
mogene11sttranscriptclusterORGPKG The Organism information for mogene11sttranscriptcluster
mogene11sttranscriptclusterPATH Mappings between probe identifiers and KEGG pathway identifiers
mogene11sttranscriptclusterPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
mogene11sttranscriptclusterPMID Maps between Manufacturer Identifiers and PubMed Identifiers
mogene11sttranscriptclusterPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
mogene11sttranscriptclusterREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
mogene11sttranscriptclusterSYMBOL Map between Manufacturer Identifiers and Gene Symbols
mogene11sttranscriptclusterUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
mogene11sttranscriptclusterUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
mogene11sttranscriptclusterUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
mogene11sttranscriptcluster_dbconn Collect information about the package annotation DB
mogene11sttranscriptcluster_dbfile Collect information about the package annotation DB
mogene11sttranscriptcluster_dbInfo Collect information about the package annotation DB
mogene11sttranscriptcluster_dbschema Collect information about the package annotation DB