Affymetrix ragene10 annotation data (chip ragene10sttranscriptcluster)

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Documentation for package ‘ragene10sttranscriptcluster.db’ version 8.4.0

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ragene10sttranscriptcluster Bioconductor annotation data package
ragene10sttranscriptcluster.db Bioconductor annotation data package
ragene10sttranscriptclusterACCNUM Map Manufacturer identifiers to Accession Numbers
ragene10sttranscriptclusterALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
ragene10sttranscriptclusterCHR Map Manufacturer IDs to Chromosomes
ragene10sttranscriptclusterCHRLENGTHS A named vector for the length of each of the chromosomes
ragene10sttranscriptclusterCHRLOC Map Manufacturer IDs to Chromosomal Location
ragene10sttranscriptclusterCHRLOCEND Map Manufacturer IDs to Chromosomal Location
ragene10sttranscriptclusterENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
ragene10sttranscriptclusterENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
ragene10sttranscriptclusterENTREZID Map between Manufacturer Identifiers and Entrez Gene
ragene10sttranscriptclusterENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
ragene10sttranscriptclusterENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
ragene10sttranscriptclusterGENENAME Map between Manufacturer IDs and Genes
ragene10sttranscriptclusterGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
ragene10sttranscriptclusterGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
ragene10sttranscriptclusterGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
ragene10sttranscriptclusterLOCUSID Map between Manufacturer Identifiers and Entrez Gene
ragene10sttranscriptclusterMAPCOUNTS Number of mapped keys for the maps in package ragene10sttranscriptcluster.db
ragene10sttranscriptclusterORGANISM The Organism information for ragene10sttranscriptcluster
ragene10sttranscriptclusterORGPKG The Organism information for ragene10sttranscriptcluster
ragene10sttranscriptclusterPATH Mappings between probe identifiers and KEGG pathway identifiers
ragene10sttranscriptclusterPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
ragene10sttranscriptclusterPMID Maps between Manufacturer Identifiers and PubMed Identifiers
ragene10sttranscriptclusterPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
ragene10sttranscriptclusterREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
ragene10sttranscriptclusterSYMBOL Map between Manufacturer Identifiers and Gene Symbols
ragene10sttranscriptclusterUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
ragene10sttranscriptclusterUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
ragene10sttranscriptclusterUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
ragene10sttranscriptcluster_dbconn Collect information about the package annotation DB
ragene10sttranscriptcluster_dbfile Collect information about the package annotation DB
ragene10sttranscriptcluster_dbInfo Collect information about the package annotation DB
ragene10sttranscriptcluster_dbschema Collect information about the package annotation DB