Affymetrix ragene20 annotation data (chip ragene20sttranscriptcluster)

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Documentation for package ‘ragene20sttranscriptcluster.db’ version 8.4.0

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ragene20sttranscriptcluster Bioconductor annotation data package
ragene20sttranscriptcluster.db Bioconductor annotation data package
ragene20sttranscriptclusterACCNUM Map Manufacturer identifiers to Accession Numbers
ragene20sttranscriptclusterALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
ragene20sttranscriptclusterCHR Map Manufacturer IDs to Chromosomes
ragene20sttranscriptclusterCHRLENGTHS A named vector for the length of each of the chromosomes
ragene20sttranscriptclusterCHRLOC Map Manufacturer IDs to Chromosomal Location
ragene20sttranscriptclusterCHRLOCEND Map Manufacturer IDs to Chromosomal Location
ragene20sttranscriptclusterENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
ragene20sttranscriptclusterENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
ragene20sttranscriptclusterENTREZID Map between Manufacturer Identifiers and Entrez Gene
ragene20sttranscriptclusterENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
ragene20sttranscriptclusterENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
ragene20sttranscriptclusterGENENAME Map between Manufacturer IDs and Genes
ragene20sttranscriptclusterGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
ragene20sttranscriptclusterGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
ragene20sttranscriptclusterGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
ragene20sttranscriptclusterLOCUSID Map between Manufacturer Identifiers and Entrez Gene
ragene20sttranscriptclusterMAPCOUNTS Number of mapped keys for the maps in package ragene20sttranscriptcluster.db
ragene20sttranscriptclusterORGANISM The Organism information for ragene20sttranscriptcluster
ragene20sttranscriptclusterORGPKG The Organism information for ragene20sttranscriptcluster
ragene20sttranscriptclusterPATH Mappings between probe identifiers and KEGG pathway identifiers
ragene20sttranscriptclusterPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
ragene20sttranscriptclusterPMID Maps between Manufacturer Identifiers and PubMed Identifiers
ragene20sttranscriptclusterPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
ragene20sttranscriptclusterREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
ragene20sttranscriptclusterSYMBOL Map between Manufacturer Identifiers and Gene Symbols
ragene20sttranscriptclusterUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
ragene20sttranscriptclusterUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
ragene20sttranscriptclusterUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
ragene20sttranscriptcluster_dbconn Collect information about the package annotation DB
ragene20sttranscriptcluster_dbfile Collect information about the package annotation DB
ragene20sttranscriptcluster_dbInfo Collect information about the package annotation DB
ragene20sttranscriptcluster_dbschema Collect information about the package annotation DB