/* @include ensmetacoordinate ************************************************* ** ** Ensembl Meta-Coordinate functions ** ** @author Copyright (C) 1999 Ensembl Developers ** @author Copyright (C) 2006 Michael K. Schuster ** @version $Revision: 1.14 $ ** @modified 2009 by Alan Bleasby for incorporation into EMBOSS core ** @modified $Date: 2012/02/04 10:30:23 $ by $Author: mks $ ** @@ ** ** This library is free software; you can redistribute it and/or ** modify it under the terms of the GNU Lesser General Public ** License as published by the Free Software Foundation; either ** version 2.1 of the License, or (at your option) any later version. ** ** This library is distributed in the hope that it will be useful, ** but WITHOUT ANY WARRANTY; without even the implied warranty of ** MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU ** Lesser General Public License for more details. ** ** You should have received a copy of the GNU Lesser General Public ** License along with this library; if not, write to the Free Software ** Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, ** MA 02110-1301, USA. ** ******************************************************************************/ #ifndef ENSMETACOORDINATE_H #define ENSMETACOORDINATE_H /* ========================================================================= */ /* ============================= include files ============================= */ /* ========================================================================= */ #include "enscoordsystem.h" AJ_BEGIN_DECLS /* ========================================================================= */ /* =============================== constants =============================== */ /* ========================================================================= */ /* ========================================================================= */ /* ============================== public data ============================== */ /* ========================================================================= */ /* @data EnsPMetacoordinateadaptor ******************************************** ** ** Ensembl Meta-Coordinate Adaptor. ** ** @alias EnsSMetacoordinateadaptor ** @alias EnsOMetacoordinateadaptor ** ** @attr Adaptor [EnsPDatabaseadaptor] Ensembl Database Adaptor. ** @attr CacheByName [AjPTable] Ensembl Feature name (i.e. table name) cache. ** @attr CacheByLength [AjPTable] Maximum length cache. ** @@ ******************************************************************************/ typedef struct EnsSMetacoordinateadaptor { EnsPDatabaseadaptor Adaptor; AjPTable CacheByName; AjPTable CacheByLength; } EnsOMetacoordinateadaptor; #define EnsPMetacoordinateadaptor EnsOMetacoordinateadaptor* /* ========================================================================= */ /* =========================== public functions ============================ */ /* ========================================================================= */ /* ** Prototype definitions */ /* Ensembl Meta-Coordinate Adaptor */ EnsPMetacoordinateadaptor ensRegistryGetMetacoordinateadaptor( EnsPDatabaseadaptor dba); EnsPMetacoordinateadaptor ensMetacoordinateadaptorNew( EnsPDatabaseadaptor dba); void ensMetacoordinateadaptorDel(EnsPMetacoordinateadaptor *Pmca); AjBool ensMetacoordinateadaptorFetchAllCoordsystems( const EnsPMetacoordinateadaptor mca, const AjPStr name, AjPList css); ajint ensMetacoordinateadaptorGetMaximumlength( const EnsPMetacoordinateadaptor mca, const EnsPCoordsystem cs, const AjPStr name); /* ** End of prototype definitions */ AJ_END_DECLS #endif /* !ENSMETACOORDINATE_H */