application: rebaseextract [ documentation: "Process the REBASE database for use by restriction enzyme applications" groups: "Utils:Database creation" gui: "no" batch: "no" cpu: "low" relations: "EDAM_topic:0100 Nucleic acid restriction" relations: "EDAM_topic:0091 Data handling" relations: "EDAM_operation:1812 Data loading" ] section: input [ information: "Input section" type: "page" ] infile: infile [ parameter: "Y" information: "REBASE database withrefm file" knowntype: "rebase withrefm" relations: "EDAM_data:1517 Restriction enzyme property" ] infile: protofile [ parameter: "Y" information: "REBASE database proto file" knowntype: "rebase proto" relations: "EDAM_data:1517 Restriction enzyme property" ] boolean: equivalences [ additional: "Y" default: "Y" information: "Create prototype equivalence file" help: "This option calculates an embossre.equ file using restriction enzyme prototypes in the withrefm file." relations: "EDAM_data:2527 Parameter" ] endsection: input