# Copyright 2012 Matt Chaput. All rights reserved. # # Redistribution and use in source and binary forms, with or without # modification, are permitted provided that the following conditions are met: # # 1. Redistributions of source code must retain the above copyright notice, # this list of conditions and the following disclaimer. # # 2. Redistributions in binary form must reproduce the above copyright # notice, this list of conditions and the following disclaimer in the # documentation and/or other materials provided with the distribution. # # THIS SOFTWARE IS PROVIDED BY MATT CHAPUT ``AS IS'' AND ANY EXPRESS OR # IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF # MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO # EVENT SHALL MATT CHAPUT OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, # INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT # LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, # OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF # LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING # NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, # EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. # # The views and conclusions contained in the software and documentation are # those of the authors and should not be interpreted as representing official # policies, either expressed or implied, of Matt Chaput. """ The API and implementation of columns may change in the next version of Whoosh! This module contains "Column" objects which you can use as the argument to a Field object's ``sortable=`` keyword argument. Each field defines a default column type for when the user specifies ``sortable=True`` (the object returned by the field's ``default_column()`` method). The default column type for most fields is ``VarBytesColumn``, although numeric and date fields use ``NumericColumn``. Expert users may use other field types that may be faster or more storage efficient based on the field contents. For example, if a field always contains one of a limited number of possible values, a ``RefBytesColumn`` will save space by only storing the values once. If a field's values are always a fixed length, the ``FixedBytesColumn`` saves space by not storing the length of each value. A ``Column`` object basically exists to store configuration information and provides two important methods: ``writer()`` to return a ``ColumnWriter`` object and ``reader()`` to return a ``ColumnReader`` object. """ from __future__ import division, with_statement import struct, warnings from array import array from bisect import bisect_right try: import zlib except ImportError: zlib = None from whoosh.compat import b, bytes_type, BytesIO from whoosh.compat import array_tobytes, xrange from whoosh.compat import dumps, loads from whoosh.filedb.structfile import StructFile from whoosh.idsets import BitSet, OnDiskBitSet from whoosh.system import emptybytes from whoosh.util.cache import lru_cache from whoosh.util.numeric import typecode_max, typecode_min from whoosh.util.numlists import GrowableArray from whoosh.util.varints import varint, read_varint # Utility functions def _mintype(maxn): if maxn < 2 ** 8: typecode = "B" elif maxn < 2 ** 16: typecode = "H" elif maxn < 2 ** 31: typecode = "i" else: typecode = "I" return typecode # Python does not support arrays of long long see Issue 1172711 # These functions help write/read a simulated an array of q/Q using lists def write_qsafe_array(typecode, arry, dbfile): if typecode == "q": for num in arry: dbfile.write_long(num) elif typecode == "Q": for num in arry: dbfile.write_ulong(num) else: dbfile.write_array(arry) def read_qsafe_array(typecode, size, dbfile): if typecode == "q": arry = [dbfile.read_long() for _ in xrange(size)] elif typecode == "Q": arry = [dbfile.read_ulong() for _ in xrange(size)] else: arry = dbfile.read_array(typecode, size) return arry def make_array(typecode, size=0, default=None): if typecode.lower() == "q": # Python does not support arrays of long long see Issue 1172711 if default is not None and size: arry = [default] * size else: arry = [] else: if default is not None and size: arry = array(typecode, (default for _ in xrange(size))) else: arry = array(typecode) return arry # Base classes class Column(object): """Represents a "column" of rows mapping docnums to document values. The interface requires that you store the start offset of the column, the length of the column data, and the number of documents (rows) separately, and pass them to the reader object. """ reversible = False def writer(self, dbfile): """Returns a :class:`ColumnWriter` object you can use to use to create a column of this type on disk. :param dbfile: the :class:`~whoosh.filedb.structfile.StructFile` to write to. """ return self.Writer(dbfile) def reader(self, dbfile, basepos, length, doccount): """Returns a :class:`ColumnReader` object you can use to read a column of this type from disk. :param dbfile: the :class:`~whoosh.filedb.structfile.StructFile` to read from. :param basepos: the offset within the file at which the column starts. :param length: the length in bytes of the column occupies in the file. :param doccount: the number of rows (documents) in the column. """ return self.Reader(dbfile, basepos, length, doccount) def default_value(self, reverse=False): """Returns the default value for this column type. """ return self._default def stores_lists(self): """Returns True if the column stores a list of values for each document instead of a single value. """ return False class ColumnWriter(object): def __init__(self, dbfile): self._dbfile = dbfile self._count = 0 def fill(self, docnum): write = self._dbfile.write default = self._defaultbytes if docnum > self._count: for _ in xrange(docnum - self._count): write(default) def add(self, docnum, value): raise NotImplementedError def finish(self, docnum): pass class ColumnReader(object): def __init__(self, dbfile, basepos, length, doccount): self._dbfile = dbfile self._basepos = basepos self._length = length self._doccount = doccount def __len__(self): return self._doccount def __getitem__(self, docnum): raise NotImplementedError def sort_key(self, docnum): return self[docnum] def __iter__(self): for i in xrange(self._doccount): yield self[i] def load(self): return list(self) def set_reverse(self): raise NotImplementedError # Arbitrary bytes column class VarBytesColumn(Column): """Stores variable length byte strings. See also :class:`RefBytesColumn`. The current implementation limits the total length of all document values a segment to 2 GB. The default value (the value returned for a document that didn't have a value assigned to it at indexing time) is an empty bytestring (``b''``). """ _default = emptybytes def __init__(self, allow_offsets=True, write_offsets_cutoff=2**15): """ :param allow_offsets: Whether the column should write offsets when there are many rows in the column (this makes opening the column much faster). This argument is mostly for testing. :param write_offsets_cutoff: Write offsets (for speed) when there are more than this many rows in the column. This argument is mostly for testing. """ self.allow_offsets = allow_offsets self.write_offsets_cutoff = write_offsets_cutoff def writer(self, dbfile): return self.Writer(dbfile, self.allow_offsets, self.write_offsets_cutoff) class Writer(ColumnWriter): def __init__(self, dbfile, allow_offsets=True, cutoff=2**15): assert isinstance(dbfile, StructFile) self._dbfile = dbfile self._count = 0 self._lengths = GrowableArray(allow_longs=False) self._offsets = GrowableArray(allow_longs=False) self._offset_base = 0 self.allow_offsets = allow_offsets self.cutoff = cutoff def __repr__(self): return "" def fill(self, docnum): base = self._offset_base if docnum > self._count: self._lengths.extend(0 for _ in xrange(docnum - self._count)) self._offsets.extend(base for _ in xrange(docnum - self._count)) def add(self, docnum, v): self.fill(docnum) self._dbfile.write(v) self._lengths.append(len(v)) self._offsets.append(self._offset_base) self._offset_base += len(v) self._count = docnum + 1 def finish(self, doccount): dbfile = self._dbfile lengths = self._lengths.array offsets = self._offsets.array self.fill(doccount) dbfile.write_array(lengths) # Only write the offsets if there is a large number of items in the # column, otherwise it's fast enough to derive them from the lens write_offsets = self.allow_offsets and doccount > self.cutoff if write_offsets: dbfile.write_array(offsets) # Backwards compatibility: previous versions only wrote the lengths, # and the last byte of the column was the lengths type code... dbfile.write(lengths.typecode.encode("ascii")) # ...but if we wrote offsets, make the last byte "X" so we know if write_offsets: dbfile.write(offsets.typecode.encode("ascii")) dbfile.write("X".encode("ascii")) class Reader(ColumnReader): def __init__(self, dbfile, basepos, length, doccount): self._dbfile = dbfile self._basepos = basepos self._length = length self._doccount = doccount self.had_stored_offsets = False # for testing self._read_offsets_and_lengths() def __repr__(self): return "" def _read_offsets_and_lengths(self): dbfile = self._dbfile basepos = self._basepos length = self._length doccount = self._doccount # The end of the lengths array is the end of the data minus the # typecode byte lastbyte = basepos + length - 1 # Load the length typecode from the end lens_code = chr(dbfile.get_byte(lastbyte)) offsets = None if lens_code == "X": self.had_stored_offsets = True # This indicates we wrote the offsets, so get the real lengths # type code lens_code = chr(dbfile.get_byte(lastbyte - 2)) offsets_code = chr(dbfile.get_byte(lastbyte - 1)) # Read the offsets from before the last byte itemsize = struct.calcsize(offsets_code) offsetstart = (lastbyte - 2) - doccount * itemsize offsets = dbfile.get_array(offsetstart, offsets_code, doccount) lastbyte = offsetstart # Load the length array itemsize = struct.calcsize(lens_code) lenstart = lastbyte - (itemsize * doccount) lengths = dbfile.get_array(lenstart, lens_code, doccount) # If we didn't write the offsets, derive them from the lengths if offsets is None: offsets = array("L") base = 0 for length in lengths: offsets.append(base) base += length self._offsets = offsets self._lengths = lengths def __getitem__(self, docnum): length = self._lengths[docnum] if not length: return emptybytes offset = self._offsets[docnum] return self._dbfile.get(self._basepos + offset, length) def __iter__(self): get = self._dbfile.get pos = self._basepos for length in self._lengths: yield get(pos, length) pos += length class FixedBytesColumn(Column): """Stores fixed-length byte strings. """ def __init__(self, fixedlen, default=None): """ :param fixedlen: the fixed length of byte strings in this column. :param default: the default value to use for documents that don't specify a value. If you don't specify a default, the column will use ``b'\\x00' * fixedlen``. """ self._fixedlen = fixedlen if default is None: default = b("\x00") * fixedlen elif len(default) != fixedlen: raise ValueError self._default = default def writer(self, dbfile): return self.Writer(dbfile, self._fixedlen, self._default) def reader(self, dbfile, basepos, length, doccount): return self.Reader(dbfile, basepos, length, doccount, self._fixedlen, self._default) class Writer(ColumnWriter): def __init__(self, dbfile, fixedlen, default): self._dbfile = dbfile self._fixedlen = fixedlen self._default = self._defaultbytes = default self._count = 0 def __repr__(self): return "" def add(self, docnum, v): if v == self._default: return if docnum > self._count: self.fill(docnum) assert len(v) == self._fixedlen self._dbfile.write(v) self._count = docnum + 1 class Reader(ColumnReader): def __init__(self, dbfile, basepos, length, doccount, fixedlen, default): self._dbfile = dbfile self._basepos = basepos self._doccount = doccount self._fixedlen = fixedlen self._default = self._defaultbytes = default self._count = length // fixedlen def __repr__(self): return "" def __getitem__(self, docnum): if docnum >= self._count: return self._defaultbytes pos = self._basepos + self._fixedlen * docnum return self._dbfile.get(pos, self._fixedlen) def __iter__(self): count = self._count default = self._default for i in xrange(self._doccount): if i < count: yield self[i] else: yield default # Variable/fixed length reference (enum) column class RefBytesColumn(Column): """Stores variable-length or fixed-length byte strings, similar to :class:`VarBytesColumn` and :class:`FixedBytesColumn`. However, where those columns stores a value for each document, this column keeps a list of all the unique values in the field, and for each document stores a short pointer into the unique list. For fields where the number of possible values is smaller than the number of documents (for example, "category" or "chapter"), this saves significant space. This column type supports a maximum of 65535 unique values across all documents in a segment. You should generally use this column type where the number of unique values is in no danger of approaching that number (for example, a "tags" field). If you try to index too many unique values, the column will convert additional unique values to the default value and issue a warning using the ``warnings`` module (this will usually be preferable to crashing the indexer and potentially losing indexed documents). """ # NOTE that RefBytes is reversible within a single column (we could just # negate the reference number), but it's NOT reversible ACROSS SEGMENTS # (since different segments can have different uniques values in their # columns), so we have to say that the column type is not reversible reversible = False def __init__(self, fixedlen=0, default=None): """ :param fixedlen: an optional fixed length for the values. If you specify a number other than 0, the column will require all values to be the specified length. :param default: a default value to use for documents that don't specify one. If you don't specify a default, the column will use an empty bytestring (``b''``), or if you specify a fixed length, ``b'\\x00' * fixedlen``. """ self._fixedlen = fixedlen if default is None: default = b("\x00") * fixedlen if fixedlen else emptybytes elif fixedlen and len(default) != fixedlen: raise ValueError self._default = default def writer(self, dbfile): return self.Writer(dbfile, self._fixedlen, self._default) def reader(self, dbfile, basepos, length, doccount): return self.Reader(dbfile, basepos, length, doccount, self._fixedlen) class Writer(ColumnWriter): def __init__(self, dbfile, fixedlen, default): self._dbfile = dbfile self._fixedlen = fixedlen self._default = default # At first we'll buffer refs in a byte array. If the number of # uniques stays below 256, we can just write the byte array. As # soon as the ref count goes above 255, we know we're going to have # to write shorts, so we'll switch to writing directly. self._refs = array("B") self._uniques = {default: 0} self._count = 0 def __repr__(self): return "" def fill(self, docnum): if docnum > self._count: if self._refs is not None: self._refs.extend(0 for _ in xrange(docnum - self._count)) else: dbfile = self._dbfile for _ in xrange(docnum - self._count): dbfile.write_ushort(0) def add(self, docnum, v): dbfile = self._dbfile refs = self._refs self.fill(docnum) uniques = self._uniques try: ref = uniques[v] except KeyError: uniques[v] = ref = len(uniques) if refs is not None and ref >= 256: # We won't be able to use bytes, we have to switch to # writing unbuffered ushorts for n in refs: dbfile.write_ushort(n) refs = self._refs = None if refs is not None: self._refs.append(ref) else: if ref > 65535: warnings.warn("RefBytesColumn dropped unique value %r" % v, UserWarning) ref = 0 dbfile.write_ushort(ref) self._count = docnum + 1 def _write_uniques(self, typecode): dbfile = self._dbfile fixedlen = self._fixedlen uniques = self._uniques dbfile.write_varint(len(uniques)) # Sort unique values by position vs = sorted(uniques.keys(), key=lambda key: uniques[key]) for v in vs: if not fixedlen: dbfile.write_varint(len(v)) dbfile.write(v) def finish(self, doccount): dbfile = self._dbfile refs = self._refs self.fill(doccount) typecode = "H" if refs is not None: dbfile.write_array(refs) typecode = refs.typecode self._write_uniques(typecode) dbfile.write_byte(ord(typecode)) class Reader(ColumnReader): def __init__(self, dbfile, basepos, length, doccount, fixedlen): self._dbfile = dbfile self._basepos = basepos self._doccount = doccount self._fixedlen = fixedlen self._typecode = chr(dbfile.get_byte(basepos + length - 1)) st = struct.Struct("!" + self._typecode) self._unpack = st.unpack self._itemsize = st.size dbfile.seek(basepos + doccount * self._itemsize) self._uniques = self._read_uniques() def __repr__(self): return "" def _read_uniques(self): dbfile = self._dbfile fixedlen = self._fixedlen ucount = dbfile.read_varint() length = fixedlen uniques = [] for _ in xrange(ucount): if not fixedlen: length = dbfile.read_varint() uniques.append(dbfile.read(length)) return uniques def __getitem__(self, docnum): pos = self._basepos + docnum * self._itemsize ref = self._unpack(self._dbfile.get(pos, self._itemsize))[0] return self._uniques[ref] def __iter__(self): get = self._dbfile.get basepos = self._basepos uniques = self._uniques unpack = self._unpack itemsize = self._itemsize for i in xrange(self._doccount): pos = basepos + i * itemsize ref = unpack(get(pos, itemsize))[0] yield uniques[ref] # Numeric column class NumericColumn(FixedBytesColumn): """Stores numbers (integers and floats) as compact binary. """ reversible = True def __init__(self, typecode, default=0): """ :param typecode: a typecode character (as used by the ``struct`` module) specifying the number type. For example, ``"i"`` for signed integers. :param default: the default value to use for documents that don't specify one. """ self._typecode = typecode self._default = default def writer(self, dbfile): return self.Writer(dbfile, self._typecode, self._default) def reader(self, dbfile, basepos, length, doccount): return self.Reader(dbfile, basepos, length, doccount, self._typecode, self._default) def default_value(self, reverse=False): v = self._default if reverse: v = 0 - v return v class Writer(FixedBytesColumn.Writer): def __init__(self, dbfile, typecode, default): self._dbfile = dbfile self._pack = struct.Struct("!" + typecode).pack self._default = default self._defaultbytes = self._pack(default) self._fixedlen = struct.calcsize(typecode) self._count = 0 def __repr__(self): return "" def add(self, docnum, v): if v == self._default: return if docnum > self._count: self.fill(docnum) self._dbfile.write(self._pack(v)) self._count = docnum + 1 class Reader(FixedBytesColumn.Reader): def __init__(self, dbfile, basepos, length, doccount, typecode, default): self._dbfile = dbfile self._basepos = basepos self._doccount = doccount self._default = default self._reverse = False self._typecode = typecode self._unpack = struct.Struct("!" + typecode).unpack self._defaultbytes = struct.pack("!" + typecode, default) self._fixedlen = struct.calcsize(typecode) self._count = length // self._fixedlen def __repr__(self): return "" def __getitem__(self, docnum): s = FixedBytesColumn.Reader.__getitem__(self, docnum) return self._unpack(s)[0] def sort_key(self, docnum): key = self[docnum] if self._reverse: key = 0 - key return key def load(self): if self._typecode in "qQ": return list(self) else: return array(self._typecode, self) def set_reverse(self): self._reverse = True # Column of boolean values class BitColumn(Column): """Stores a column of True/False values compactly. """ reversible = True _default = False def __init__(self, compress_at=2048): """ :param compress_at: columns with this number of values or fewer will be saved compressed on disk, and loaded into RAM for reading. Set this to 0 to disable compression. """ self._compressat = compress_at def writer(self, dbfile): return self.Writer(dbfile, self._compressat) def default_value(self, reverse=False): return self._default ^ reverse class Writer(ColumnWriter): def __init__(self, dbfile, compressat): self._dbfile = dbfile self._compressat = compressat self._bitset = BitSet() def __repr__(self): return "" def add(self, docnum, value): if value: self._bitset.add(docnum) def finish(self, doccount): dbfile = self._dbfile bits = self._bitset.bits if zlib and len(bits) <= self._compressat: compressed = zlib.compress(array_tobytes(bits), 3) dbfile.write(compressed) dbfile.write_byte(1) else: dbfile.write_array(bits) dbfile.write_byte(0) class Reader(ColumnReader): def __init__(self, dbfile, basepos, length, doccount): self._dbfile = dbfile self._basepos = basepos self._length = length self._doccount = doccount self._reverse = False compressed = dbfile.get_byte(basepos + (length - 1)) if compressed: bbytes = zlib.decompress(dbfile.get(basepos, length - 1)) bitset = BitSet.from_bytes(bbytes) else: dbfile.seek(basepos) bitset = OnDiskBitSet(dbfile, basepos, length - 1) self._bitset = bitset def id_set(self): return self._bitset def __repr__(self): return "" def __getitem__(self, i): return i in self._bitset def sort_key(self, docnum): return int(self[docnum] ^ self._reverse) def __iter__(self): i = 0 for num in self._bitset: if num > i: for _ in xrange(num - i): yield False yield True i = num + 1 if self._doccount > i: for _ in xrange(self._doccount - i): yield False def load(self): if isinstance(self._bitset, OnDiskBitSet): bs = self._dbfile.get_array(self._basepos, "B", self._length - 1) self._bitset = BitSet.from_bytes(bs) return self def set_reverse(self): self._reverse = True # Compressed variants class CompressedBytesColumn(Column): """Stores variable-length byte strings compressed using deflate (by default). """ def __init__(self, level=3, module="zlib"): """ :param level: the compression level to use. :param module: a string containing the name of the compression module to use. The default is "zlib". The module should export "compress" and "decompress" functions. """ self._level = level self._module = module def writer(self, dbfile): return self.Writer(dbfile, self._level, self._module) def reader(self, dbfile, basepos, length, doccount): return self.Reader(dbfile, basepos, length, doccount, self._module) class Writer(VarBytesColumn.Writer): def __init__(self, dbfile, level, module): VarBytesColumn.Writer.__init__(self, dbfile) self._level = level self._compress = __import__(module).compress def __repr__(self): return "" def add(self, docnum, v): v = self._compress(v, self._level) VarBytesColumn.Writer.add(self, docnum, v) class Reader(VarBytesColumn.Reader): def __init__(self, dbfile, basepos, length, doccount, module): VarBytesColumn.Reader.__init__(self, dbfile, basepos, length, doccount) self._decompress = __import__(module).decompress def __repr__(self): return "" def __getitem__(self, docnum): v = VarBytesColumn.Reader.__getitem__(self, docnum) if v: v = self._decompress(v) return v def __iter__(self): for v in VarBytesColumn.Reader.__iter__(self): yield self._decompress(v) def load(self): return list(self) class CompressedBlockColumn(Column): """An experimental column type that compresses and decompresses blocks of values at a time. This can lead to high compression and decent performance for columns with lots of very short values, but random access times are usually terrible. """ def __init__(self, level=3, blocksize=32, module="zlib"): """ :param level: the compression level to use. :param blocksize: the size (in KB) of each compressed block. :param module: a string containing the name of the compression module to use. The default is "zlib". The module should export "compress" and "decompress" functions. """ self._level = level self._blocksize = blocksize self._module = module def writer(self, dbfile): return self.Writer(dbfile, self._level, self._blocksize, self._module) def reader(self, dbfile, basepos, length, doccount): return self.Reader(dbfile, basepos, length, doccount, self._module) class Writer(ColumnWriter): def __init__(self, dbfile, level, blocksize, module): self._dbfile = dbfile self._blocksize = blocksize * 1024 self._level = level self._compress = __import__(module).compress self._reset() def __repr__(self): return "" def _reset(self): self._startdoc = None self._block = emptybytes self._lengths = [] def _emit(self): dbfile = self._dbfile block = self._compress(self._block, self._level) header = (self._startdoc, self._lastdoc, len(block), tuple(self._lengths)) dbfile.write_pickle(header) dbfile.write(block) def add(self, docnum, v): if self._startdoc is None: self._startdoc = docnum self._lengths.append((docnum, len(v))) self._lastdoc = docnum self._block += v if len(self._block) >= self._blocksize: self._emit() self._reset() def finish(self, doccount): # If there's still a pending block, write it out if self._startdoc is not None: self._emit() class Reader(ColumnReader): def __init__(self, dbfile, basepos, length, doccount, module): ColumnReader.__init__(self, dbfile, basepos, length, doccount) self._decompress = __import__(module).decompress self._blocks = [] dbfile.seek(basepos) pos = 0 while pos < length: startdoc, enddoc, blocklen, lengths = dbfile.read_pickle() here = dbfile.tell() self._blocks.append((startdoc, enddoc, here, blocklen, lengths)) dbfile.seek(blocklen, 1) pos = here + blocklen def __repr__(self): return "" def _find_block(self, docnum): # TODO: use binary search instead of linear for i, b in enumerate(self._blocks): if docnum < b[0]: return None elif docnum <= b[1]: return i return None def _get_block(self, blocknum): block = self._blocks[blocknum] pos = block[2] blocklen = block[3] lengths = block[4] data = self._decompress(self._dbfile.get(self._basepos + pos, blocklen)) values = {} base = 0 for docnum, vlen in lengths: values[docnum] = data[base:base + vlen] base += vlen return values def __getitem__(self, docnum): i = self._find_block(docnum) if i is None: return emptybytes return self._get_block(i)[docnum] def __iter__(self): last = -1 for i, block in enumerate(self._blocks): startdoc = block[0] enddoc = block[1] if startdoc > (last + 1): for _ in xrange(startdoc - last): yield emptybytes values = self._get_block(i) for docnum in xrange(startdoc, enddoc + 1): if docnum in values: yield values[docnum] else: yield emptybytes last = enddoc if enddoc < self._doccount - 1: for _ in xrange(self._doccount - enddoc): yield emptybytes class StructColumn(FixedBytesColumn): def __init__(self, spec, default): self._spec = spec self._fixedlen = struct.calcsize(spec) self._default = default def writer(self, dbfile): return self.Writer(dbfile, self._spec, self._default) def reader(self, dbfile, basepos, length, doccount): return self.Reader(dbfile, basepos, length, doccount, self._spec, self._default) class Writer(FixedBytesColumn.Writer): def __init__(self, dbfile, spec, default): self._dbfile = dbfile self._struct = struct.Struct(spec) self._fixedlen = self._struct.size self._default = default self._defaultbytes = self._struct.pack(*default) self._count = 0 def __repr__(self): return "" def add(self, docnum, v): b = self._struct.pack(*v) FixedBytesColumn.Writer.add(self, docnum, b) class Reader(FixedBytesColumn.Reader): def __init__(self, dbfile, basepos, length, doccount, spec, default): self._dbfile = dbfile self._basepos = basepos self._doccount = doccount self._struct = struct.Struct(spec) self._fixedlen = self._struct.size self._default = default self._defaultbytes = self._struct.pack(*default) self._count = length // self._fixedlen def __repr__(self): return "" def __getitem__(self, docnum): v = FixedBytesColumn.Reader.__getitem__(self, docnum) return self._struct.unpack(v) # Utility readers class EmptyColumnReader(ColumnReader): """Acts like a reader for a column with no stored values. Always returns the default. """ def __init__(self, default, doccount): """ :param default: the value to return for all "get" requests. :param doccount: the number of documents in the nominal column. """ self._default = default self._doccount = doccount def __getitem__(self, docnum): return self._default def __iter__(self): return (self._default for _ in xrange(self._doccount)) def load(self): return self class MultiColumnReader(ColumnReader): """Serializes access to multiple column readers, making them appear to be one large column. """ def __init__(self, readers, offsets=None): """ :param readers: a sequence of column reader objects. """ self._readers = readers self._doc_offsets = [] self._doccount = 0 if offsets is None: for r in readers: self._doc_offsets.append(self._doccount) self._doccount += len(r) else: assert len(offsets) == len(readers) self._doc_offsets = offsets def _document_reader(self, docnum): return max(0, bisect_right(self._doc_offsets, docnum) - 1) def _reader_and_docnum(self, docnum): rnum = self._document_reader(docnum) offset = self._doc_offsets[rnum] return rnum, docnum - offset def __getitem__(self, docnum): x, y = self._reader_and_docnum(docnum) return self._readers[x][y] def __iter__(self): for r in self._readers: for v in r: yield v class TranslatingColumnReader(ColumnReader): """Calls a function to "translate" values from an underlying column reader object before returning them. ``IndexReader`` objects can wrap a column reader with this object to call ``FieldType.from_column_value`` on the stored column value before returning it the the user. """ def __init__(self, reader, translate): """ :param reader: the underlying ColumnReader object to get values from. :param translate: a function that takes a value from the underlying reader and returns a translated value. """ self._reader = reader self._translate = translate def raw_column(self): """Returns the underlying column reader. """ return self._reader def __len__(self): return len(self._reader) def __getitem__(self, docnum): return self._translate(self._reader[docnum]) def sort_key(self, docnum): return self._reader.sort_key(docnum) def __iter__(self): translate = self._translate return (translate(v) for v in self._reader) def set_reverse(self): self._reader.set_reverse() # Column wrappers class WrappedColumn(Column): def __init__(self, child): self._child = child def writer(self, *args, **kwargs): return self.Writer(self._child.writer(*args, **kwargs)) def reader(self, *args, **kwargs): return self.Reader(self._child.reader(*args, **kwargs)) def stores_lists(self): return self._child.stores_lists() class WrappedColumnWriter(ColumnWriter): def __init__(self, child): self._child = child def fill(self, docnum): return self._child.fill(docnum) def add(self, docnum, value): return self._child.add(docnum, value) def finish(self, docnum): return self._child.finish(docnum) class WrappedColumnReader(ColumnReader): def __init__(self, child): self._child = child def __len__(self): return len(self._child) def __getitem__(self, docnum): return self._child[docnum] def sort_key(self, docnum): return self._child.sort_key(docnum) def __iter__(self): return iter(self._child) def load(self): return list(self) def set_reverse(self): self._child.set_reverse() class ClampedNumericColumn(WrappedColumn): """An experimental wrapper type for NumericColumn that clamps out-of-range values instead of raising an exception. """ def reader(self, *args, **kwargs): return self._child.reader(*args, **kwargs) class Writer(WrappedColumnWriter): def __init__(self, child): self._child = child self._min = typecode_min[child._typecode] self._max = typecode_max[child._typecode] def add(self, docnum, v): v = min(v, self._min) v = max(v, self._max) self._child.add(docnum, v) class PickleColumn(WrappedColumn): """Converts arbitrary objects to pickled bytestrings and stores them using the wrapped column (usually a :class:`VarBytesColumn` or :class:`CompressedBytesColumn`). If you can express the value you want to store as a number or bytestring, you should use the appropriate column type to avoid the time and size overhead of pickling and unpickling. """ class Writer(WrappedColumnWriter): def __repr__(self): return "" def add(self, docnum, v): if v is None: v = emptybytes else: v = dumps(v, 2) self._child.add(docnum, v) class Reader(WrappedColumnReader): def __repr__(self): return "" def __getitem__(self, docnum): v = self._child[docnum] if not v: return None else: return loads(v) def __iter__(self): for v in self._child: if not v: yield None else: yield loads(v) # List columns class ListColumn(WrappedColumn): def stores_lists(self): return True class ListColumnReader(ColumnReader): def sort_key(self, docnum): return self[docnum][0] def __iter__(self): for docnum in xrange(len(self)): yield self[docnum] class VarBytesListColumn(ListColumn): def __init__(self): self._child = VarBytesColumn() class Writer(WrappedColumnWriter): def add(self, docnum, ls): out = [varint(len(ls))] for v in ls: assert isinstance(v, bytes_type) out.append(varint(len(v))) out.append(v) self._child.add(docnum, emptybytes.join(out)) class Reader(ListColumnReader, WrappedColumnReader): def __getitem__(self, docnum): data = self._child[docnum] if not data: return [] bio = BytesIO(data) count = read_varint(bio.read) out = [] for _ in xrange(count): vlen = read_varint(bio.read) v = bio.read(vlen) out.append(v) return out class FixedBytesListColumn(ListColumn): def __init__(self, fixedlen): self._fixedlen = fixedlen self._child = VarBytesColumn() def writer(self, *args, **kwargs): return self.Writer(self._child.writer(*args, **kwargs), self._fixedlen) def reader(self, *args, **kwargs): return self.Reader(self._child.reader(*args, **kwargs), self._fixedlen) class Writer(WrappedColumnWriter): def __init__(self, child, fixedlen): self._child = child self._fixedlen = fixedlen self._lengths = GrowableArray() self._count = 0 def add(self, docnum, ls): out = [] for v in ls: assert len(v) == self._fixedlen out.append(v) b = emptybytes.join(out) self._child.add(docnum, b) class Reader(ListColumnReader, WrappedColumnReader): def __init__(self, child, fixedlen): self._child = child self._fixedlen = fixedlen def __getitem__(self, docnum): fixedlen = self._fixedlen v = self._child[docnum] if not v: return [] ls = [v[i:i + fixedlen] for i in xrange(0, len(v), fixedlen)] return ls #class RefListColumn(Column): # def __init__(self, fixedlen=0): # """ # :param fixedlen: an optional fixed length for the values. If you # specify a number other than 0, the column will require all values # to be the specified length. # :param default: a default value to use for documents that don't specify # one. If you don't specify a default, the column will use an empty # bytestring (``b''``), or if you specify a fixed length, # ``b'\\x00' * fixedlen``. # """ # # self._fixedlen = fixedlen # # def stores_lists(self): # return True # # def writer(self, dbfile): # return self.Writer(dbfile, self._fixedlen) # # def reader(self, dbfile, basepos, length, doccount): # return self.Reader(dbfile, basepos, length, doccount, self._fixedlen) # # class Writer(ColumnWriter): # def __init__(self, dbfile, fixedlen): # self._dbfile = dbfile # self._fixedlen = fixedlen # # self._refs = GrowableArray(allow_longs=False) # self._lengths = GrowableArray(allow_longs=False) # self._count = 0 # # def __repr__(self): # return "" # # def fill(self, docnum): # if docnum > self._count: # self._lengths.extend(0 for _ in xrange(docnum - self._count)) # # def add(self, docnum, ls): # uniques = self._uniques # refs = self._refs # # self.fill(docnum) # self._lengths.append(len(ls)) # for v in ls: # try: # i = uniques[v] # except KeyError: # uniques[v] = i = len(uniques) # refs.append(i) # # self._count = docnum + 1 # # def finish(self, doccount): # dbfile = self._dbfile # refs = self._refs.array # lengths = self._lengths.array # # self.fill(doccount) # dbfile.write_byte(ord(lengths.typecode)) # dbfile.write_array(lengths) # dbfile.write_byte(ord(refs.typecode)) # self._write_uniques(refs.typecode) # dbfile.write_array(refs) # # class Reader(ListColumnReader): # def __init__(self, dbfile, basepos, length, doccount, fixedlen): # self._dbfile = dbfile # self._basepos = basepos # self._doccount = doccount # self._fixedlen = fixedlen # # dbfile.seek(basepos) # lencode = chr(dbfile.read_byte()) # self._lengths = dbfile.read_array(lencode, doccount) # # self._typecode = chr(dbfile.read_byte()) # refst = struct.Struct("!" + self._typecode) # self._unpack = refst.unpack # self._itemsize = refst.size # # self._read_uniques() # self._refbase = dbfile.tell() # # # Create an array of offsets into the references using the lengths # offsets = array("i", (0,)) # for length in self._lengths: # offsets.append(offsets[-1] + length) # self._offsets = offsets # # def __repr__(self): # return "" # # def _get_ref(self, docnum): # pos = self._basepos + 1 + docnum * self._itemsize # return self._unpack(self._dbfile.get(pos, self._itemsize))[0] # # def __getitem__(self, docnum): # offset = self._offsets[docnum] # length = self._lengths[docnum] # # pos = self._refbase + offset * self._itemsize # reflist = self._dbfile.get_array(pos, self._typecode, length) # return [self._uniques[ref] for ref in reflist]