############################################################### ############################################################### ############################################################### ### CCP4 6.3: NCONT version 6.3 : ## ############################################################### User: unknown Run date: 15/11/2013 Run time: 11:26:55 Please reference: Collaborative Computational Project, Number 4. 1994. "The CCP4 Suite: Programs for Protein Crystallography". Acta Cryst. D50, 760-763. as well as any specific reference in the program write-up. ------------------------------------------------------------------------------ PDB file /home/jmht/Documents/test/ncont/new/1EZJ/phaser_loc0_ALL_poly_ala_trunc_10.713444_rad_3_UNMOD.1_ren_o[0.0,0.0,0.5]_joined.pdb has been read in. ------------------------------------------------------------------------------ Input cards Data line--- source A//CA Data line--- target a,b//CA Data line--- maxdist 1.5 Data line--- cells 2 Data line--- sort target inc ------------------------------------------------------------------------------ Selected 114 source atoms Selected 40 target atoms Unit cell numbering: 1 2 3 4 5 Symmetry transformation matrices in cell 3: Operation x,y,z [ 1.0000 0.0000 0.0000] [ 0.0000] T = [ 0.0000 1.0000 0.0000] [ 0.0000] [ 0.0000 0.0000 1.0000] [ 0.0000] Operation -y+1/2,x+1/2,z [ 0.0000 -1.0000 0.0000] [ 24.2920] T = [ 1.0000 -0.0000 0.0000] [ 24.2920] [ 0.0000 0.0000 1.0000] [ 0.0000] Operation -x,-y,z [ -1.0000 -0.0000 0.0000] [ 0.0000] T = [ 0.0000 -1.0000 0.0000] [ 0.0000] [ 0.0000 0.0000 1.0000] [ 0.0000] Operation y+1/2,-x+1/2,z [ -0.0000 1.0000 0.0000] [ 24.2920] T = [ -1.0000 0.0000 0.0000] [ 24.2920] [ 0.0000 0.0000 1.0000] [ 0.0000] Operation x+1/2,-y+1/2,-z [ 1.0000 -0.0000 -0.0000] [ 24.2920] T = [ 0.0000 -1.0000 -0.0000] [ 24.2920] [ 0.0000 0.0000 -1.0000] [ 0.0000] Operation y,x,-z [ 0.0000 1.0000 -0.0000] [ 0.0000] T = [ 1.0000 -0.0000 -0.0000] [ 0.0000] [ 0.0000 0.0000 -1.0000] [ 0.0000] Operation -x+1/2,y+1/2,-z [ -1.0000 0.0000 -0.0000] [ 24.2920] T = [ 0.0000 1.0000 -0.0000] [ 24.2920] [ 0.0000 0.0000 -1.0000] [ 0.0000] Operation -y,-x,-z [ -0.0000 -1.0000 -0.0000] [ 0.0000] T = [ -1.0000 0.0000 -0.0000] [ 0.0000] [ 0.0000 0.0000 -1.0000] [ 0.0000] ------------------------------------------------------------------------------ 14 contacts found: SOURCE ATOMS TARGET ATOMS DISTANCE CELL SYMMETRY /1/A/ 65(ALA). / CA [ C]: /1/a/ 53(VAL). / CA [ C]: 1.07 435 -Y+1,-X,-Z+2 /1/A/ 62(LYS). / CA [ C]: /1/a/ 56(LEU). / CA [ C]: 1.49 435 -Y+1,-X,-Z+2 /1/A/ 58(LEU). / CA [ C]: /1/a/ 68(VAL). / CA [ C]: 1.18 335 X+1/2,-Y+1/2,-Z+2 /1/A/ 61(GLU). / CA [ C]: /1/a/ 71(ASN). / CA [ C]: 0.84 335 X+1/2,-Y+1/2,-Z+2 /1/A/ 62(LYS). / CA [ C]: /1/a/ 72(LYS). / CA [ C]: 0.82 335 X+1/2,-Y+1/2,-Z+2 /1/A/ 63(SER). / CA [ C]: /1/a/ 73(GLN). / CA [ C]: 1.10 335 X+1/2,-Y+1/2,-Z+2 /1/A/ 64(SER). / CA [ C]: /1/a/ 74(LEU). / CA [ C]: 0.49 335 X+1/2,-Y+1/2,-Z+2 /1/A/ 65(ALA). / CA [ C]: /1/a/ 75(LEU). / CA [ C]: 0.40 335 X+1/2,-Y+1/2,-Z+2 /1/A/ 66(ARG). / CA [ C]: /1/a/ 76(LYS). / CA [ C]: 0.46 335 X+1/2,-Y+1/2,-Z+2 /1/A/ 67(LYS). / CA [ C]: /1/a/ 77(GLN). / CA [ C]: 0.55 335 X+1/2,-Y+1/2,-Z+2 /1/A/ 68(VAL). / CA [ C]: /1/a/ 78(ILE). / CA [ C]: 0.64 335 X+1/2,-Y+1/2,-Z+2 /1/A/ 69(ASP). / CA [ C]: /1/a/ 79(GLN). / CA [ C]: 0.61 335 X+1/2,-Y+1/2,-Z+2 /1/A/ 70(GLU). / CA [ C]: /1/a/ 80(GLU). / CA [ C]: 0.79 335 X+1/2,-Y+1/2,-Z+2 /1/A/ 75(LEU). / CA [ C]: /1/a/ 84(SER). / CA [ C]: 1.13 335 X+1/2,-Y+1/2,-Z+2 -------------------------------------------------------------------------- Contact statistics: CELL FRACT COORD-S SYM NO SYM OPERATION NUM OF CONT-S 335 0 0 2 4 X+1/2,-Y+1/2,-Z+2 12 435 1 0 2 7 -Y+1,-X,-Z+2 2 Total 14 contacts -------------------------------------------------------------------------- NCONT: Normal termination Times: User: 0.0s System: 0.0s Elapsed: 0:00