Metadata-Version: 1.1
Name: conkit
Version: 0.4
Summary: Python Interface for Residue-Residue Contact Predictions
Home-page: https://github.com/fsimkovic/conkit
Author: Felix Simkovic
Author-email: felixsimkovic@me.com
License: BSD License
Download-URL: https://github.com/fsimkovic/conkit/tarball/0.4
Description: ..
        
        **************************
        Contact Prediction ToolKit
        **************************
        
        **A Python Interface to contact predictions**
        
        This project is a result of the continuous struggle using residue-residue contact prediction pipelines, visualisation tools and related software. The aim was to reduce this complexity and provide one unified interface as a basic platform. The resulting platform is the Contact Prediction ToolKit, or ConKit in short.
        
        .. image:: https://img.shields.io/pypi/v/conkit.svg
           :target: https://pypi.python.org/pypi/conkit
           :alt: PyPy Package
        
        .. image:: https://img.shields.io/pypi/pyversions/conkit.svg
           :target: https://pypi.python.org/pypi/conkit
           :alt: Python Versions
        
        .. image:: https://readthedocs.org/projects/conkit/badge/?version=latest
           :target: http://conkit.readthedocs.io/en/latest/?badge=latest
           :alt: Documentation Status
        
        .. image:: https://travis-ci.org/fsimkovic/conkit.svg?branch=master
           :target: https://travis-ci.org/fsimkovic/conkit
           :alt: Travis Build
        
        .. image:: https://coveralls.io/repos/github/fsimkovic/conkit/badge.svg?branch=master
           :target: https://coveralls.io/github/fsimkovic/conkit?branch=master
           :alt: Coveralls Status
        
        .. image:: https://landscape.io/github/fsimkovic/conkit/master/landscape.svg?style=flat
           :target: https://landscape.io/github/fsimkovic/conkit/master
           :alt: Code Health
        
        
        Key Features
        ~~~~~~~~~~~~
        
        - Parsers for Multiple Sequence Alignment and contact prediction files
        - Easy-to-use wrappers for the most-commonly used software, e.g. HHblits, Jackhmmer, CCMpred, PSICOV, ...
        - Many convenience functions for prediction-structure matching, determination of True Positive contacts, calculation of MSA and contact prediction statistics, etc.
        
        Contributing
        ~~~~~~~~~~~~
        There are two ways by which you can contribute to ConKit:
        
        1. Submit any suggestions to the `GitHub Issue Tracker`_, or
        2. Fork this repository, commit your changes and submit a pull request.
        
        Found a Bug?
        ~~~~~~~~~~~~
        Please use the `GitHub Issue Tracker`_.
        
        Ackowledgements
        ~~~~~~~~~~~~~~~
        - `Stefan Seemayer`_
        - `BioPython`_
        
        
        
        .. _BioPython: https://www.biopython.org
        .. _CCP4: http://www.ccp4.ac.uk
        .. _CCP-EM: http://www.ccpem.ac.uk
        .. _GitHub Issue Tracker: https://github.com/fsimkovic/conkit/issues
        .. _Stefan Seemayer: https://github.com/sseemayer
        
Platform: Linux
Platform: Mac OS-X
Platform: Unix
Classifier: Development Status :: 4 - Beta
Classifier: Intended Audience :: Science/Research
Classifier: License :: OSI Approved :: BSD License
Classifier: Operating System :: OS Independent
Classifier: Programming Language :: Python
Classifier: Programming Language :: Python :: 2.7
Classifier: Programming Language :: Python :: 3.4
Classifier: Programming Language :: Python :: 3.5
Classifier: Topic :: Scientific/Engineering :: Bio-Informatics