# SECONDARY STRUCTURE MOTIF LIBRARY 
#
# FIXED FORMAT!: 'ENTRY: SS_TYPE MATRIX_DIMENSION DRMS_CUT MAX_D_CUT 
#                        KINK_DRMS_CUT KINK_MAX_D_CUT MAX_LENGTH
#                 ENTRY: 2I3, 6F5.2
#
# The order of motifs is important because each motif supersedes
# previous motifs.
#
# Also, the beta motif has to be of type 1 and the helix motif has
# to be of type 2. The helix motif is supposed to be the first in the 
# list of motifs, so that it has the priority over other motifs when
# there is some overlap.

ENTRY:  2  5 0.50 0.90 0.80 1.50 0.00 6.00 ALPHA HELIX
   0.000   3.802   5.518   5.541   6.683
   3.802   0.000   3.802   5.519   5.556
   5.518   3.802   0.000   3.801   5.530
   5.541   5.519   3.801   0.000   3.801
   6.683   5.556   5.530   3.801   0.000

ENTRY:  1  5 0.80 1.00 1.30 1.60 6.1 5.00 BETA STRAND
   0.000   3.804   6.601   9.678  12.679
   3.804   0.000   3.802   6.607   9.665
   6.601   3.802   0.000   3.803   6.558
   9.678   6.607   3.803   0.000   3.803
  12.679   9.665   6.558   3.803   0.000

# ENTRY:  2  6 0.50 0.90 0.60 1.30 0.00 6.00 ALPHA HELIX
#    0.000   3.802   5.506   5.543   6.723   8.943
#    3.802   0.000   3.801   5.513   5.555   6.773
#    5.506   3.801   0.000   3.801   5.518   5.560
#    5.543   5.513   3.801   0.000   3.801   5.536
#    6.723   5.555   5.518   3.801   0.000   3.801
#    8.943   6.773   5.560   5.536   3.801   0.000