#include <string>
#include <iostream>
#include <iomanip>
#include <map>

#include "TRandom3.h"

#include "km3net-dataformat/offline/Head.hh"
#include "km3net-dataformat/offline/MultiHead.hh"
#include "km3net-dataformat/offline/Evt.hh" 

#include "JSupport/JMultipleFileScanner.hh"
#include "JSupport/JMonteCarloFileSupportkit.hh"
#include "JSupport/JFileRecorder.hh"
#include "JSupport/JSupport.hh"
#include "JSupport/JMeta.hh"

#include "JPhysics/JGeane.hh"
#include "JPhysics/JGeanz.hh"
#include "JPhysics/JConstants.hh"

#include "Jeep/JPrint.hh"
#include "Jeep/JParser.hh"
#include "Jeep/JMessage.hh"


/**
 * \file
 *
 * Auxiliary program to manipulate MUPAGE data.
 * \author mdejong
 */
int main(int argc, char **argv)
{
  using namespace std;
  using namespace JPP;
  
  JMultipleFileScanner<Evt>                                              inputFile;
  JFileRecorder<JTYPELIST<JAAnetTypes_t, JMeta, JRootTypes_t>::typelist> outputFile;
  JLimit_t&      numberOfEvents = inputFile.getLimit();
  double         P;
  double         u;
  double         E;
  UInt_t         seed;
  int            debug;

  try { 

    JParser<> zap("Auxiliary program to manipulate MUPAGE data.");
    
    zap['f'] = make_field(inputFile);
    zap['o'] = make_field(outputFile)      = "mupage.root";
    zap['n'] = make_field(numberOfEvents)  = JLimit::max();
    zap['P'] = make_field(P,  "Keep muons in event with given probability  (<= 1, 1 == all)")  = 1.0;
    zap['u'] = make_field(u,  "Reject events as a function of multiplicity (>= 0, 0 == none)") = 0.0;
    zap['E'] = make_field(E,  "Energy scaling factor")                                         = 1.0;
    zap['S'] = make_field(seed)            = 0;
    zap['d'] = make_field(debug)           = 2;
    
    zap(argc, argv);
  }
  catch(const exception &error) {
    FATAL(error.what() << endl);
  }

  gRandom->SetSeed(seed);
  
  
  outputFile.open();

  if (!outputFile.is_open()) {
    FATAL("Error opening file " << outputFile << endl);
  }

  outputFile.put(JMeta(argc, argv));
  outputFile.put(*gRandom);

  JMultipleFileScanner<Head> io(inputFile);

  io >> outputFile;

  while (inputFile.hasNext()) {

    STATUS("event: " << setw(10) << inputFile.getCounter() << '\r'); DEBUG(endl);

    Evt* event = inputFile.next();

    // randomly reject muons in event

    for (vector<Trk>::iterator i = event->mc_trks.begin(); i != event->mc_trks.end(); ) {

      if (gRandom->Rndm() < P)
	++i;
      else
	i = event->mc_trks.erase(i);
    }

    // apply energy loss
    
    for (vector<Trk>::iterator i = event->mc_trks.begin(); i != event->mc_trks.end(); ) {
      
      i->E  = gWater(i->E, i->t * getSpeedOfLight());
      i->E *= E;

      if (i->E > MASS_MUON)
	++i;
      else
	i = event->mc_trks.erase(i);
    }

    // randonly reject events as a function of muon multiplicity
      
    if (gRandom->Rndm() < pow(event->mc_trks.size(),-u)) {
      outputFile.put(*event);
    }
  }
  STATUS(endl); 
  
  outputFile.put(*gRandom);
  outputFile.close();
}