Minctracc

None

Parameters

source: MINC image ( input )

target: MINC image ( input )

transformed_source: MINC image ( optional, output )

output_transfile: MINC transformation matrix ( output )

transformation_type: Choice ( input )

transformation_direction: Choice ( input )

initial_transformation: MINC transformation matrix ( optional, input )

estimation_init_transfo: Choice ( input )

estimation_center: Choice ( input )

estimation_scales: Choice ( input )

estimation_translations: Choice ( input )

center: ListOf ( optional, input )

transformation_direction: Choice ( input )

rotation_type: Choice ( input )

model_mask: MINC image ( optional, input )

source_mask: MINC image ( optional, input )

interpolation: Choice ( input )

optimization_function: Choice ( input )

group_number: Integer ( input )

threshold: ListOf ( input )

blur_pdf: Integer ( input )

speckle: Float ( input )

tol: Float ( input )

w_translations: ListOf ( input )

w_rotations: ListOf ( input )

w_scales: ListOf ( input )

w_shear: ListOf ( input )

tol: Float ( input )

simplex: Float ( input )

num_steps: Integer ( input )

source_lattice: MINC image ( optional, input )

model_lattice: MINC image ( optional, input )

step: ListOf ( input )

xstep: Integer ( input )

ystep: Integer ( input )

zstep: Integer ( input )

sub_lattice: Integer ( input )

lattice_diameter: ListOf ( input )

max_def_magnitude: Float ( input )

param1: Choice ( input )

param2: Choice ( input )

smoothing: Choice ( input )

smoothing_direction: Choice ( input )

super: Integer ( optional, input )

iterations: Integer ( input )

weight: Float ( input )

stiffness: Float ( input )

similarity_cost_ratio: Float ( input )

Technical information

Toolbox : Morphologist

User level : 1

Identifier : minctracc

File name : brainvisa/toolboxes/morphologist/processes/segmentationpipeline/components_obsolete/MNI-low-level/minctracc.py

Supported file formats :

source :

MINC image

target :

MINC image

transformed_source :

MINC image

output_transfile :

MINC transformation matrix

initial_transformation :

MINC transformation matrix

model_mask :

MINC image

source_mask :

MINC image

source_lattice :

MINC image

model_lattice :

MINC image