#! /bin/csh -f # # getfirstsliceno # # Original Author: Doug Greve # CVS Revision Info: # $Author: nicks $ # $Date: 2007/01/09 22:41:17 $ # $Revision: 1.2 $ # # Copyright (C) 2002-2007, # The General Hospital Corporation (Boston, MA). # All rights reserved. # # Distribution, usage and copying of this software is covered under the # terms found in the License Agreement file named 'COPYING' found in the # FreeSurfer source code root directory, and duplicated here: # https://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurferOpenSourceLicense # # General inquiries: freesurfer@nmr.mgh.harvard.edu # Bug reports: analysis-bugs@nmr.mgh.harvard.edu # if($#argv != 1) then echo "USAGE: getfirstsliceno stem" echo '$Id: getfirstsliceno,v 1.2 2007/01/09 22:41:17 nicks Exp $'; exit 1; endif set stem = $argv[1]; @ fs = 0; set stop = 0; while( ! $stop) set fname = `printf %s_%03d.hdr $stem $fs`; if( -e $fname ) break; @ fs = $fs + 1; if($fs > 50) then echo "ERROR: cannot find any files with $stem"; exit 1; endif end echo $fs exit 0; ##########################################