mask {} end :== averaging_mode= --{If true: symmetry operations and lattice translations will be encoded within the mask region using negative entries. This is required if the mask is to be used for density averaging.} to= --{Destination for mask.} mode=sigma|vdw|probe|fbox --{Method used to determine which points lie within the mask: - fbox: box mask: mask<=0 within box extent and 1 outside - sigma: molecular mask: use sigma values + probe radius - vdw: molecular mask: use vdw radii + probe radius - probe: molecular mask: use only probe radius Default=vdw} xmin= xmax= ymin= ymax= zmin= zmax= --{Extent of box in fractional space for mode=fbox. Default=unit cell} proberadius= --{Probe radius to be added to atomic mask radii. Default=1.4A} shrink= --{Shrink radius. Default=0} selection= --{Atom selection for mask calculation.} partition= --{Number of shells to partition points into outside molecular mask. Default=1} thickness= --{Thickness of shells outside molecular mask. Default=1.4A} --{The following symbols are declared: - $inside: percentage of unitcell volume inside mask - $outside: percentage of unitcell volume outside mask - $averadius: atomic mask radius averaged over selected atoms The resulting map is: - 0 within partition 1=(atom+probe-shrink) around atoms - 1 within partition 1 and 2 - n within partition n and n+1 - the number of shells outside all partitions.}