! Module file: read_sdb ! ! CNS module ! ********** ! ! Authors: Axel Brunger and Paul Adams ! ! copyright Yale University ! ! Function: ! Read a site database files and transfer the information ! to a compound symbol ! ! Requirements: module {read_sdb} ( &file; &siteinfo; &sg_expected; &sg_read; ) set message ? end evaluate ($message_old=$result) set echo ? end evaluate ($echo_old=$result) if ( $log_level = verbose ) then set echo=on message=normal end else set echo=off message=off end end if set display=? end evaluate ($curr_display=$result) checkversion 1.3 inline @@&file if (&EXIST%sg = true) then eval(&sg_read = &sg) else eval(&sg_read = "") end if if (&BLANK%sg_expected = false) then if (&BLANK%sg_read = false) then eval($sgecaps=capitalize(&sg_expected)) eval($sgrcaps=capitalize(&sg_read)) if ($sgecaps # $sgrcaps) then set display=OUTPUT end display display ************************************************************ display FATAL ERROR: SPACE GROUP NAME MISMATCH display Expected space group name: &sg_expected display Space group in &file: &sg_read display Please check the space group definitions! display ************************************************************ display abort end if end if end if evaluate ($done=false) evaluate ($count=1) evaluate ($add=0) while ( $done = false ) loop new if ( &EXIST%site.action_$count = true ) then if ( &BLANK%site.segid_$count = false ) then evaluate ($add=$add+1) evaluate (&siteinfo.x_$add=&site.x_$count) evaluate (&siteinfo.y_$add=&site.y_$count) evaluate (&siteinfo.z_$add=&site.z_$count) evaluate (&siteinfo.b_$add=&site.b_$count) evaluate (&siteinfo.q_$add=&site.q_$count) evaluate (&siteinfo.g_$add=&site.g_$count) evaluate (&siteinfo.type_$add=&site.type_$count) evaluate (&siteinfo.segid_$add=capitalize(&site.segid_$count)) evaluate (&siteinfo.action_$add=&site.action_$count) evaluate (&siteinfo.counter=$add) end if else evaluate ($done=true) end if evaluate ($count=$count+1) end loop new set message=$message_old echo=$echo_old end