GARANT COMMANDS: criteria fragment overlap - analyse overlap of assigned peaks

USAGE: criteria fragment overlap <name>

Define a new criterion with name <name> of type overlap. The criterion analyses 
the current possible assignments for degenerate assignments, i.e. measured 
peaks that have several possible assignments. For each fragment occurring in 
the assignment possibilities of a given peak, all fragments that occur in other 
possible assignments of the same peak are stored as a mapping.
The fragments are then classified according to the number of mapped fragments:
	'-' no assignment
	'.' unique assignment
	'+' degeneracies
The mapped fargments are listed if the comment for the criterion is turned on.

EXAMPLE:
		# defines criterion 'ovrl' of type overlap
		# and turns the comment on
	criteria fragment overlap ovrl
	criteria comment on ovrl
	...

		# calulate and list the fragment report
        report calculate
        report fragments


EXAMPLE OF OUTPUT:
  VAL 4  :  .   | 0)  GLY 43
  SER 5  :  -   |
  GLU 6  :  +   | 0)  PRO 9  LEU 44
  PRO 7  :  .   | 0)  GLN 22
  ALA 8  :  -   |
  PRO 9  :  .   | 0)  GLU 6

This means: there exist some peaks that are assigned both to resonances of 
Val 4 and to resonances of Gly 43. All peaks assigned to Ser 5 are uniquely 
assigned. ...

SEE ALSO: report fragment, criteria comment on, assignments.