Almost TODO

Thu Nov  2 12:10:55 CET 2006 >> Add energy analysis for trajectories.
				Done.

Thu Nov  2 15:49:02 CET 2006 >> float to double conversion in comparison
				in Z does not work.
				Done.

Thu Nov  2 19:05:18 CET 2006 >> Add monte carlo to Build Special.

Thu Nov  2 19:05:48 CET 2006 >> Fix RGYR with selections.

Fri Nov  3 11:22:07 CET 2006 >> Garbage collector leak.
				Done.

Sat Nov  4 14:23:42 CET 2006 >> Add support for characters.

Fri Nov 10 09:28:28 CET 2006 >> Add "configuretion" in MD/MC. Should list all
				configuration parameters.

Fri Nov 10 13:21:11 CET 2006 >> Check, improve run-restart-cont in MD (and MC)
				simulations.

Fri Nov 10 13:21:51 CET 2006 >> Improve selection of atoms (and in general 
				molecules, protein etc. API.

Fri Nov 10 15:55:44 CET 2006 >> Check WARNINGS about missing SASA and EEF1.