trpzip2 native MD 
 &cntrl
    imin = 0, nstlim = 200, dt = 0.0005,
    ntx = 5, 
    ntt = 0, tol = 0.000001, 
    ntc = 2, ntf = 1, ntb = 0,
    ntwx = 1000, ntwe = 0, ntwr = 5000, ntpr = 10, 
    cut = 999.0, 
    igb = 1, irest=1,
    itgtmd=1, tgtrmsd=2.0, tgtmdfrc=10.00,
    tgtfitmask=":3-10@CA,N,C,O,H,HA",
    tgtrmsmask=":3-10@CA,N,C,O,H,HA",
 /

