Index of /cvmfsmonitor/repository/chipster.egi.eu/tools_3.16.3/rseqc

[ICO]NameLast modifiedSizeDescription

[PARENTDIR]Parent Directory   -  
[   ]htseq-qa 2019-07-31 14:06 97  
[   ]htseq-count 2019-07-31 14:06 103  
[   ]pydoc 2019-07-31 14:06 107  
[   ]htseq-count_chr 2019-07-31 14:06 111  
[   ]idle 2019-07-31 14:06 122  
[   ]2to3 2019-07-31 14:06 124  
[   ]prefix_lines.py 2019-07-31 14:06 224  
[   ]wheel 2019-07-31 14:06 239  
[   ]pip 2019-07-31 14:06 243  
[   ]pip2 2019-07-31 14:06 243  
[   ]pip2.7 2019-07-31 14:06 243  
[   ]markdown_py 2019-07-31 14:06 245  
[   ]futurize 2019-07-31 14:06 246  
[   ]f2py 2019-07-31 14:06 247  
[   ]f2py2 2019-07-31 14:06 247  
[   ]f2py2.7 2019-07-31 14:06 247  
[   ]pasteurize 2019-07-31 14:06 248  
[   ]cygdb 2019-07-31 14:06 251  
[   ]chardetect 2019-07-31 14:06 252  
[   ]cythonize 2019-07-31 14:06 252  
[   ]easy_install 2019-07-31 14:06 261  
[   ]easy_install-2.7 2019-07-31 14:06 261  
[TXT]nib_length.py 2019-07-31 14:06 269  
[   ]cython 2019-07-31 14:06 272  
[   ]one_field_per_line.py 2019-07-31 14:06 299  
[   ]random_lines.py 2019-07-31 14:06 369  
[   ]prefix_lines.pyc 2019-07-31 14:06 441  
[TXT]maf_gap_frequency.py 2019-07-31 14:06 500  
[   ]nib_length.pyc 2019-07-31 14:06 500  
[   ]one_field_per_line.pyc 2019-07-31 14:06 509  
[   ]wiggle_to_simple.py 2019-07-31 14:06 594  
[   ]random_lines.pyc 2019-07-31 14:06 615  
[TXT]maf_shuffle_columns.py 2019-07-31 14:06 621  
[TXT]maf_species_in_all_f..>2019-07-31 14:06 648  
[   ]maf_gc_content.py 2019-07-31 14:06 673  
[TXT]tfloc_summary.py 2019-07-31 14:06 715  
[   ]int_seqs_to_char_str..>2019-07-31 14:06 725  
[TXT]bed_coverage.py 2019-07-31 14:06 736  
[TXT]line_select.py 2019-07-31 14:06 740  
[   ]maf_select.py 2019-07-31 14:06 756  
[TXT]maf_percent_columns_..>2019-07-31 14:06 759  
[TXT]maf_mean_length_unga..>2019-07-31 14:06 787  
[   ]maf_truncate.py 2019-07-31 14:06 803  
[   ]wiggle_to_array_tree.py2019-07-31 14:06 822  
[TXT]maf_randomize.py 2019-07-31 14:06 832  
[TXT]bed_count_overlappin..>2019-07-31 14:06 845  
[TXT]bed_count_by_interva..>2019-07-31 14:06 846  
[TXT]maf_translate_chars.py 2019-07-31 14:06 850  
[TXT]bed_merge_overlappin..>2019-07-31 14:06 868  
[   ]wiggle_to_simple.pyc 2019-07-31 14:06 884  
[TXT]maf_print_chroms.py 2019-07-31 14:06 886  
[   ]tfloc_summary.pyc 2019-07-31 14:06 898  
[TXT]maf_percent_identity.py2019-07-31 14:06 910  
[TXT]maf_filter_max_wc.py 2019-07-31 14:06 919  
[TXT]maf_to_fasta.py 2019-07-31 14:06 924  
[   ]nib_intervals_to_fas..>2019-07-31 14:06 925  
[   ]maf_gap_frequency.pyc 2019-07-31 14:06 928  
[TXT]maf_limit_to_species.py2019-07-31 14:06 959  
[   ]wiggle_to_chr_binned..>2019-07-31 14:06 1.0K 
[   ]maf_shuffle_columns.pyc2019-07-31 14:06 1.0K 
[TXT]bed_bigwig_profile.py 2019-07-31 14:06 1.0K 
[TXT]maf_col_counts.py 2019-07-31 14:06 1.0K 
[   ]maf_species_in_all_f..>2019-07-31 14:06 1.0K 
[TXT]bed_intersect_basewi..>2019-07-31 14:06 1.0K 
[   ]maf_gc_content.pyc 2019-07-31 14:06 1.0K 
[   ]bed_count_by_interva..>2019-07-31 14:06 1.0K 
[   ]bed_count_overlappin..>2019-07-31 14:06 1.0K 
[TXT]maf_to_int_seqs.py 2019-07-31 14:06 1.1K 
[   ]maf_mean_length_unga..>2019-07-31 14:06 1.1K 
[   ]line_select.pyc 2019-07-31 14:06 1.1K 
[TXT]bed_subtract_basewis..>2019-07-31 14:06 1.1K 
[TXT]align_print_template.py2019-07-31 14:06 1.1K 
[   ]maf_select.pyc 2019-07-31 14:06 1.1K 
[   ]interval_join.py 2019-07-31 14:06 1.1K 
[TXT]lav_to_maf.py 2019-07-31 14:06 1.1K 
[   ]nib_chrom_intervals_..>2019-07-31 14:06 1.1K 
[   ]maf_word_frequency.py 2019-07-31 14:06 1.1K 
[TXT]bed_extend_to.py 2019-07-31 14:06 1.1K 
[   ]maf_randomize.pyc 2019-07-31 14:06 1.1K 
[TXT]maf_mask_cpg.py 2019-07-31 14:06 1.1K 
[   ]maf_percent_columns_..>2019-07-31 14:06 1.1K 
[   ]maf_truncate.pyc 2019-07-31 14:06 1.2K 
[TXT]lav_to_axt.py 2019-07-31 14:06 1.2K 
[TXT]bed_diff_basewise_su..>2019-07-31 14:06 1.2K 
[   ]bed_coverage.pyc 2019-07-31 14:06 1.2K 
[   ]int_seqs_to_char_str..>2019-07-31 14:06 1.2K 
[   ]bed_bigwig_profile.pyc 2019-07-31 14:06 1.2K 
[TXT]axt_to_fasta.py 2019-07-31 14:06 1.2K 
[   ]maf_col_counts.pyc 2019-07-31 14:06 1.2K 
[TXT]interval_count_inter..>2019-07-31 14:06 1.2K 
[   ]wiggle_to_array_tree..>2019-07-31 14:06 1.2K 
[   ]maf_drop_overlapping.py2019-07-31 14:06 1.2K 
[TXT]pretty_table.py 2019-07-31 14:06 1.2K 
[   ]maf_percent_identity..>2019-07-31 14:06 1.3K 
[TXT]table_add_column.py 2019-07-31 14:06 1.3K 
[   ]bed_merge_overlappin..>2019-07-31 14:06 1.3K 
[   ]bed_extend_to.pyc 2019-07-31 14:06 1.3K 
[   ]bed_intersect_basewi..>2019-07-31 14:06 1.3K 
[   ]maf_translate_chars.pyc2019-07-31 14:06 1.3K 
[   ]maf_limit_to_species..>2019-07-31 14:06 1.3K 
[   ]maf_print_chroms.pyc 2019-07-31 14:06 1.3K 
[TXT]maf_div_sites.py 2019-07-31 14:06 1.3K 
[   ]maf_filter_max_wc.pyc 2019-07-31 14:06 1.3K 
[TXT]bed_complement.py 2019-07-31 14:06 1.3K 
[   ]maf_to_fasta.pyc 2019-07-31 14:06 1.3K 
[   ]interval_join.pyc 2019-07-31 14:06 1.3K 
[   ]bed_subtract_basewis..>2019-07-31 14:06 1.4K 
[TXT]bed_coverage_by_inte..>2019-07-31 14:06 1.4K 
[   ]maf_to_int_seqs.pyc 2019-07-31 14:06 1.4K 
[TXT]wiggle_to_binned_arr..>2019-07-31 14:06 1.4K 
[   ]pretty_table.pyc 2019-07-31 14:06 1.5K 
[   ]wiggle_to_chr_binned..>2019-07-31 14:06 1.5K 
[   ]maf_drop_overlapping..>2019-07-31 14:06 1.5K 
[   ]bed_diff_basewise_su..>2019-07-31 14:06 1.5K 
[TXT]maf_chop.py 2019-07-31 14:06 1.5K 
[   ]nib_intervals_to_fas..>2019-07-31 14:06 1.5K 
[   ]align_print_template..>2019-07-31 14:06 1.5K 
[TXT]maf_thread_for_speci..>2019-07-31 14:06 1.5K 
[   ]table_add_column.pyc 2019-07-31 14:06 1.5K 
[   ]maf_covered_ranges.pyc 2019-07-31 14:06 1.5K 
[TXT]maf_filter.py 2019-07-31 14:06 1.5K 
[TXT]maf_covered_ranges.py 2019-07-31 14:06 1.6K 
[   ]maf_word_frequency.pyc 2019-07-31 14:06 1.6K 
[   ]maf_count.py 2019-07-31 14:06 1.6K 
[TXT]maf_print_scores.py 2019-07-31 14:06 1.6K 
[   ]maf_mask_cpg.pyc 2019-07-31 14:06 1.6K 
[   ]bed_complement.pyc 2019-07-31 14:06 1.6K 
[TXT]maf_split_by_src.py 2019-07-31 14:06 1.6K 
[   ]wiggle_to_binned_arr..>2019-07-31 14:06 1.6K 
[   ]get_scores_in_interv..>2019-07-31 14:06 1.7K 
[   ]interval_count_inter..>2019-07-31 14:06 1.7K 
[   ]python-config 2019-07-31 14:06 1.7K 
[   ]python2-config 2019-07-31 14:06 1.7K 
[   ]python2.7-config 2019-07-31 14:06 1.7K 
[TXT]axt_extract_ranges.py 2019-07-31 14:06 1.7K 
[   ]lav_to_maf.pyc 2019-07-31 14:06 1.7K 
[TXT]bam_stat.py 2019-07-31 14:06 1.7K 
[TXT]maf_covered_regions.py 2019-07-31 14:06 1.7K 
[   ]bed_coverage_by_inte..>2019-07-31 14:06 1.7K 
[   ]nib_chrom_intervals_..>2019-07-31 14:06 1.7K 
[   ]lav_to_axt.pyc 2019-07-31 14:06 1.7K 
[   ]maf_div_sites.pyc 2019-07-31 14:06 1.7K 
[TXT]maf_to_concat_fasta.py 2019-07-31 14:06 1.7K 
[   ]maf_col_counts_all.pyc 2019-07-31 14:06 1.7K 
[TXT]maf_mapping_word_fre..>2019-07-31 14:06 1.7K 
[TXT]maf_col_counts_all.py 2019-07-31 14:06 1.8K 
[   ]maf_count.pyc 2019-07-31 14:06 1.8K 
[TXT]bed_build_windows.py 2019-07-31 14:06 1.8K 
[   ]maf_thread_for_speci..>2019-07-31 14:06 1.8K 
[   ]maf_filter.pyc 2019-07-31 14:06 1.8K 
[TXT]maf_region_coverage_..>2019-07-31 14:06 1.9K 
[   ]maf_print_scores.pyc 2019-07-31 14:06 1.9K 
[   ]maf_split_by_src.pyc 2019-07-31 14:06 1.9K 
[   ]bed_intersect.pyc 2019-07-31 14:06 1.9K 
[   ]axt_extract_ranges.pyc 2019-07-31 14:06 1.9K 
[TXT]find_in_sorted_file.py 2019-07-31 14:06 2.0K 
[TXT]bed_intersect.py 2019-07-31 14:06 2.0K 
[   ]maf_mapping_word_fre..>2019-07-31 14:06 2.0K 
[   ]bed_build_windows.pyc 2019-07-31 14:06 2.0K 
[TXT]maf_extract_ranges.py 2019-07-31 14:06 2.1K 
[   ]qv_to_bqv.pyc 2019-07-31 14:06 2.1K 
[TXT]qv_to_bqv.py 2019-07-31 14:06 2.1K 
[   ]maf_covered_regions.pyc2019-07-31 14:06 2.1K 
[   ]maf_region_coverage_..>2019-07-31 14:06 2.1K 
[   ]maf_extract_ranges.pyc 2019-07-31 14:06 2.2K 
[   ]maf_chop.pyc 2019-07-31 14:06 2.2K 
[   ]get_scores_in_interv..>2019-07-31 14:06 2.2K 
[TXT]table_filter.py 2019-07-31 14:06 2.2K 
[   ]bam_stat.pyc 2019-07-31 14:06 2.3K 
[TXT]elandresult2bed 2019-07-31 14:06 2.3K 
[   ]maf_to_concat_fasta.pyc2019-07-31 14:06 2.3K 
[   ]elandexport2bed 2019-07-31 14:06 2.3K 
[   ]maf_chunk.pyc 2019-07-31 14:06 2.4K 
[TXT]read_GC.py 2019-07-31 14:06 2.4K 
[TXT]elandmulti2bed 2019-07-31 14:06 2.4K 
[TXT]maf_chunk.py 2019-07-31 14:06 2.5K 
[   ]maf_build_index.pyc 2019-07-31 14:06 2.5K 
[TXT]maf_to_axt.py 2019-07-31 14:06 2.5K 
[   ]divide_bam.py 2019-07-31 14:06 2.5K 
[   ]sam2bed 2019-07-31 14:06 2.5K 
[TXT]bam2fq.py 2019-07-31 14:06 2.5K 
[   ]out_to_chain.py 2019-07-31 14:06 2.5K 
[   ]maf_extract_chrom_ra..>2019-07-31 14:06 2.5K 
[   ]find_in_sorted_file.pyc2019-07-31 14:06 2.6K 
[TXT]read_duplication.py 2019-07-31 14:06 2.6K 
[TXT]insertion_profile.py 2019-07-31 14:06 2.6K 
[   ]table_filter.pyc 2019-07-31 14:06 2.6K 
[TXT]maf_extract_chrom_ra..>2019-07-31 14:06 2.7K 
[TXT]read_NVC.py 2019-07-31 14:06 2.7K 
[TXT]clipping_profile.py 2019-07-31 14:06 2.7K 
[   ]bam2fq.pyc 2019-07-31 14:06 2.8K 
[TXT]lzop_build_offset_ta..>2019-07-31 14:06 2.8K 
[TXT]maf_build_index.py 2019-07-31 14:06 2.8K 
[TXT]deletion_profile.py 2019-07-31 14:06 2.9K 
[TXT]read_quality.py 2019-07-31 14:06 2.9K 
[   ]mask_quality.pyc 2019-07-31 14:06 3.0K 
[TXT]mismatch_profile.py 2019-07-31 14:06 3.0K 
[   ]maf_interval_alignib..>2019-07-31 14:06 3.0K 
[   ]divide_bam.pyc 2019-07-31 14:06 3.0K 
[   ]mask_quality.py 2019-07-31 14:06 3.1K 
[   ]insertion_profile.pyc 2019-07-31 14:06 3.1K 
[   ]read_GC.pyc 2019-07-31 14:06 3.1K 
[   ]clipping_profile.pyc 2019-07-31 14:06 3.2K 
[   ]maf_to_axt.pyc 2019-07-31 14:06 3.3K 
[   ]read_duplication.pyc 2019-07-31 14:06 3.3K 
[   ]read_hexamer.py 2019-07-31 14:06 3.4K 
[   ]read_NVC.pyc 2019-07-31 14:06 3.4K 
[TXT]ucsc_gene_table_to_i..>2019-07-31 14:06 3.5K 
[   ]read_hexamer.pyc 2019-07-31 14:06 3.5K 
[   ]deletion_profile.pyc 2019-07-31 14:06 3.5K 
[   ]mismatch_profile.pyc 2019-07-31 14:06 3.5K 
[   ]lzop_build_offset_ta..>2019-07-31 14:06 3.6K 
[   ]read_quality.pyc 2019-07-31 14:06 3.6K 
[   ]out_to_chain.pyc 2019-07-31 14:06 3.7K 
[TXT]axt_to_maf.py 2019-07-31 14:06 3.7K 
[TXT]inner_distance.py 2019-07-31 14:06 3.8K 
[   ]split_paired_bam.pyc 2019-07-31 14:06 3.8K 
[   ]maf_extract_ranges_i..>2019-07-31 14:06 3.9K 
[TXT]axt_to_lav.py 2019-07-31 14:06 3.9K 
[   ]overlay_bigwig.py 2019-07-31 14:06 4.0K 
[   ]mMK_bitset.pyc 2019-07-31 14:06 4.0K 
[TXT]maf_interval_alignib..>2019-07-31 14:06 4.1K 
[TXT]aggregate_scores_in_..>2019-07-31 14:06 4.1K 
[TXT]junction_annotation.py 2019-07-31 14:06 4.2K 
[   ]axt_to_maf.pyc 2019-07-31 14:06 4.2K 
[   ]div_snp_table_chr.pyc 2019-07-31 14:06 4.3K 
[   ]inner_distance.pyc 2019-07-31 14:06 4.4K 
[TXT]maf_tile.py 2019-07-31 14:06 4.4K 
[TXT]RNA_fragment_size.py 2019-07-31 14:06 4.4K 
[   ]axt_to_lav.pyc 2019-07-31 14:06 4.5K 
[   ]overlay_bigwig.pyc 2019-07-31 14:06 4.6K 
[TXT]junction_saturation.py 2019-07-31 14:06 4.6K 
[TXT]maf_extract_ranges_i..>2019-07-31 14:06 4.6K 
[TXT]infer_experiment.py 2019-07-31 14:06 4.6K 
[   ]split_paired_bam.py 2019-07-31 14:06 4.7K 
[TXT]bam2wig.py 2019-07-31 14:06 4.7K 
[TXT]mMK_bitset.py 2019-07-31 14:06 4.7K 
[   ]div_snp_table_chr.py 2019-07-31 14:06 4.8K 
[   ]maf_tile.pyc 2019-07-31 14:06 4.8K 
[   ]junction_saturation.pyc2019-07-31 14:06 5.0K 
[   ]junction_annotation.pyc2019-07-31 14:06 5.0K 
[   ]aggregate_scores_in_..>2019-07-31 14:06 5.1K 
[   ]bam2wig.pyc 2019-07-31 14:06 5.2K 
[   ]RNA_fragment_size.pyc 2019-07-31 14:06 5.2K 
[   ]infer_experiment.pyc 2019-07-31 14:06 5.3K 
[TXT]geneBody_coverage2.py 2019-07-31 14:06 5.3K 
[   ]split_bam.pyc 2019-07-31 14:06 5.5K 
[   ]split_bam.py 2019-07-31 14:06 5.5K 
[TXT]bed_rand_intersect.py 2019-07-31 14:06 5.8K 
[   ]bed_rand_intersect.pyc 2019-07-31 14:06 6.0K 
[   ]geneBody_coverage2.pyc 2019-07-31 14:06 6.0K 
[   ]normalize_bigwig.pyc 2019-07-31 14:06 6.1K 
[   ]normalize_bigwig.py 2019-07-31 14:06 6.1K 
[   ]gene_fourfold_sites.pyc2019-07-31 14:06 7.2K 
[TXT]RPKM_saturation.py 2019-07-31 14:06 7.3K 
[TXT]gene_fourfold_sites.py 2019-07-31 14:06 7.6K 
[   ]maf_tile_2bit.pyc 2019-07-31 14:06 7.8K 
[TXT]wignorm 2019-07-31 14:06 8.1K 
[   ]maf_tile_2.pyc 2019-07-31 14:06 8.3K 
[   ]RPKM_saturation.pyc 2019-07-31 14:06 8.3K 
[   ]read_distribution.pyc 2019-07-31 14:06 9.1K 
[   ]FPKM_count.pyc 2019-07-31 14:06 11K 
[TXT]geneBody_coverage.py 2019-07-31 14:06 11K 
[TXT]tin.py 2019-07-31 14:06 11K 
[TXT]maf_tile_2bit.py 2019-07-31 14:06 11K 
[TXT]maf_tile_2.py 2019-07-31 14:06 12K 
[TXT]read_distribution.py 2019-07-31 14:06 12K 
[   ]tin.pyc 2019-07-31 14:06 12K 
[   ]geneBody_coverage.pyc 2019-07-31 14:06 13K 
[TXT]FPKM_count.py 2019-07-31 14:06 13K 
[TXT]bnMapper.py 2019-07-31 14:06 16K 
[   ]bnMapper.pyc 2019-07-31 14:06 16K 
[TXT]smtpd.py 2019-07-31 14:06 18K 
[TXT]macs14 2019-07-31 14:06 21K 
[   ]multiqc 2019-07-31 14:06 33K 
[TXT]macs2 2019-07-31 14:06 58K 
[TXT]s3cmd 2019-07-31 14:06 144K 
[   ]python 2019-07-31 14:06 7.9M 
[   ]python2 2019-07-31 14:06 7.9M 
[   ]python2.7 2019-07-31 14:06 7.9M