Bioxhit_db Documentation

Reference:
The BIOXHIT project is funded by the European Commission within its FP6 Programme, under the thematic area "Life sciences, genomics and biotechnology for health", contract number LHSG-CT-2003-503420

This documentation is for the CCP4 BIOXHIT database handler and related software.

Changes:
List of the major changes in each release.

• Installation notes - overview of how to install the system
• Description of CCP4 DB Handler - description of CCP4 DB handler usage, communication protocols and available commands
• CCP4i Tracking Database Schema - a description of the communication protocols between the handler and client applications.
• Communication protocols - a description of the communication protocols between the handler and client applications.
• SQLite_setup - how to install SQLite for embedded database backend

• dbClientAPI.tcl documentation - detailed documentation for the Tcl client API functions
• dbClientAPI.py module documentation - detailed documentation of classes and methods in the Python client API
• Python client API usage - Python API functions available to client applications to interact with the handler

• dbviewer - description of CCP4 DB viewer usage & features.
• dbconsole - "console" applications for Tcl and Python client APIs
• starKey - client application to generate XML representation of the project history

• ccp4i.py usage - overview of the ccp4i.py module providing classes and methods for interacting with CCP4 environment and CCP4i def files
• ccp4i.py module documentation - detailed documentation of classes and methods in the ccp4i module

• tests - documentation for test scripts and manual test procedures